AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0067330


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0067330 MtrunA17_Chr1g0171171 98.329 359 6 0 72 430 17 375 0.0 746
Msa0067330 MtrunA17_Chr1g0210771 74.792 361 86 3 74 430 23 382 0.0 580
Msa0067330 MtrunA17_Chr5g0430371 39.316 351 190 5 100 430 52 399 4.36e-96 294
Msa0067330 MtrunA17_Chr2g0283581 43.544 333 168 7 105 430 39 358 5.85e-94 287
Msa0067330 MtrunA17_Chr7g0258851 41.449 345 185 6 103 430 243 587 3.46e-93 293
Msa0067330 MtrunA17_Chr2g0325481 42.560 336 173 7 102 430 44 366 4.98e-93 285
Msa0067330 MtrunA17_Chr1g0175671 40.870 345 187 6 103 430 165 509 3.46e-91 285
Msa0067330 MtrunA17_Chr2g0314801 41.791 335 177 5 104 430 29 353 9.07e-91 278
Msa0067330 MtrunA17_Chr3g0097891 43.202 331 169 8 108 430 31 350 1.65e-90 278
Msa0067330 MtrunA17_Chr2g0314791 43.413 334 161 9 108 430 29 345 7.26e-90 276
Msa0067330 MtrunA17_Chr3g0105301 38.988 336 190 5 108 430 43 376 5.91e-88 272
Msa0067330 MtrunA17_Chr4g0041011 40.181 331 176 7 108 430 47 363 2.32e-86 268
Msa0067330 MtrunA17_Chr4g0045941 39.521 334 185 5 103 430 28 350 2.88e-86 267
Msa0067330 MtrunA17_Chr4g0006991 39.826 344 188 8 106 430 84 427 5.71e-86 269
Msa0067330 MtrunA17_Chr5g0413851 39.718 355 189 9 86 430 20 359 6.28e-86 266
Msa0067330 MtrunA17_Chr4g0071391 34.908 381 221 6 76 430 67 446 3.39e-85 268
Msa0067330 MtrunA17_Chr1g0213281 35.938 384 220 8 72 430 133 515 4.51e-85 270
Msa0067330 MtrunA17_Chr5g0413271 38.323 334 197 4 106 430 143 476 2.91e-84 266
Msa0067330 MtrunA17_Chr3g0085081 40.419 334 176 6 104 428 27 346 1.06e-83 260
Msa0067330 MtrunA17_Chr4g0045951 40.000 335 184 5 102 430 39 362 1.74e-83 260
Msa0067330 MtrunA17_Chr7g0269991 37.425 334 187 6 108 426 137 463 3.05e-83 263
Msa0067330 MtrunA17_Chr3g0091031 40.120 334 177 6 104 428 27 346 8.62e-82 255
Msa0067330 MtrunA17_Chr8g0360521 40.816 343 179 9 108 430 71 409 1.65e-81 257
Msa0067330 MtrunA17_Chr3g0085071 38.554 332 185 5 104 428 42 361 1.68e-80 253
Msa0067330 MtrunA17_Chr4g0068111 36.158 354 205 6 96 430 102 453 1.93e-80 256
Msa0067330 MtrunA17_Chr4g0005491 37.037 351 198 9 103 430 57 407 1.71e-79 251
Msa0067330 MtrunA17_Chr3g0113671 37.647 340 191 7 108 426 106 445 8.19e-77 246
Msa0067330 MtrunA17_Chr7g0243301 35.038 391 226 11 63 430 24 409 1.12e-76 244
Msa0067330 MtrunA17_Chr7g0242701 38.841 345 192 7 105 430 83 427 1.67e-75 241
Msa0067330 MtrunA17_Chr8g0368461 36.648 352 195 7 107 430 177 528 2.39e-75 244
Msa0067330 MtrunA17_Chr5g0437291 37.681 345 191 8 106 426 163 507 7.03e-74 240
Msa0067330 MtrunA17_Chr3g0114101 34.278 388 227 9 71 430 43 430 3.50e-72 233
Msa0067330 MtrunA17_Chr5g0437601 35.447 347 205 7 103 430 78 424 3.05e-71 231
Msa0067330 MtrunA17_Chr2g0287901 35.511 352 197 8 103 430 92 437 8.45e-71 230
Msa0067330 MtrunA17_Chr7g0259711 35.593 354 205 6 98 430 81 432 1.62e-70 229
Msa0067330 MtrunA17_Chr4g0005481 35.244 349 206 8 100 430 100 446 4.21e-70 228
Msa0067330 MtrunA17_Chr3g0126021 35.072 345 196 7 104 430 125 459 1.11e-62 209
Msa0067330 MtrunA17_Chr8g0384151 32.853 347 207 7 99 430 81 416 5.25e-62 207
Msa0067330 MtrunA17_Chr1g0178081 32.564 390 183 12 63 430 10 341 9.74e-57 191
Msa0067330 MtrunA17_Chr1g0209921 39.485 233 129 7 105 331 41 267 4.05e-55 184
Msa0067330 MtrunA17_Chr8g0347321 28.686 373 225 13 91 430 75 439 7.50e-42 153
Msa0067330 MtrunA17_Chr6g0476041 30.688 378 207 16 93 430 152 514 1.85e-39 148
Msa0067330 MtrunA17_Chr1g0188191 31.117 376 209 14 91 430 220 581 1.65e-38 146
Msa0067330 MtrunA17_Chr5g0414051 26.650 394 246 10 71 430 36 420 2.14e-38 144
Msa0067330 MtrunA17_Chr7g0226991 28.371 356 216 10 106 430 55 402 2.34e-38 143
Msa0067330 MtrunA17_Chr8g0384421 29.919 371 220 14 90 430 112 472 6.71e-38 143
Msa0067330 MtrunA17_Chr8g0391481 28.333 360 219 11 102 430 21 372 4.89e-37 139
Msa0067330 MtrunA17_Chr4g0049421 28.329 353 215 13 108 430 48 392 1.09e-36 138
Msa0067330 MtrunA17_Chr3g0140371 26.575 365 230 7 95 430 5 360 4.82e-36 136
Msa0067330 MtrunA17_Chr5g0414061 30.084 359 203 15 107 430 93 438 2.32e-35 135
Msa0067330 MtrunA17_Chr4g0070341 30.641 359 210 16 100 430 124 471 3.05e-35 135
Msa0067330 MtrunA17_Chr8g0387921 26.703 367 210 15 105 430 71 419 1.27e-34 133
Msa0067330 MtrunA17_Chr5g0414091 28.852 357 220 12 103 430 80 431 9.33e-33 128
Msa0067330 MtrunA17_Chr6g0456681 28.969 359 221 11 100 430 56 408 2.18e-32 127
Msa0067330 MtrunA17_Chr2g0283851 28.571 364 193 14 112 430 59 400 2.51e-32 126
Msa0067330 MtrunA17_Chr6g0456691 27.200 375 227 11 91 430 56 419 3.88e-32 126
Msa0067330 MtrunA17_Chr5g0414041 29.076 368 213 15 99 430 78 433 7.61e-31 123
Msa0067330 MtrunA17_Chr6g0455901 29.032 372 207 17 94 426 59 412 2.69e-30 121
Msa0067330 MtrunA17_Chr6g0451321 28.997 369 202 18 101 430 110 457 1.30e-28 117
Msa0067330 MtrunA17_Chr7g0221291 45.833 96 51 1 104 198 75 170 1.90e-23 96.7
Msa0067330 MtrunA17_Chr7g0221271 36.301 146 85 4 93 233 63 205 6.37e-23 95.9
Msa0067330 MtrunA17_Chr3g0085101 36.522 115 63 2 293 399 1 113 3.22e-17 77.4
Msa0067330 MtrunA17_Chr2g0287931 33.051 118 67 2 168 273 3 120 2.60e-15 72.4
Msa0067330 MtrunA17_Chr1g0209931 40.000 105 44 3 330 430 3 92 3.22e-15 71.2
Msa0067330 MtrunA17_Chr2g0287911 46.032 63 22 2 103 162 56 109 1.49e-12 63.9
Msa0067330 MtrunA17_Chr5g0429191 50.000 44 22 0 380 423 2 45 2.88e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0067330 AT3G54260.1 63.585 357 122 4 79 430 21 374 4.77e-170 482
Msa0067330 AT2G31110.2 39.835 364 200 6 75 430 10 362 1.59e-91 281
Msa0067330 AT5G58600.1 40.290 345 189 7 99 430 60 400 1.25e-90 280
Msa0067330 AT5G06700.1 40.870 345 187 6 103 430 250 594 2.38e-90 286
Msa0067330 AT1G29050.1 39.714 350 185 5 96 430 40 378 2.72e-89 276
Msa0067330 AT2G30900.1 41.964 336 173 9 106 430 41 365 6.14e-88 272
Msa0067330 AT2G42570.1 39.940 333 183 5 104 430 43 364 4.20e-87 270
Msa0067330 AT2G34070.1 38.576 337 189 5 101 430 58 383 5.24e-87 270
Msa0067330 AT3G12060.1 39.710 345 191 5 103 430 191 535 2.59e-86 274
Msa0067330 AT5G20590.1 38.841 345 193 6 103 430 136 479 1.44e-85 270
Msa0067330 AT5G01360.2 38.728 346 190 8 106 430 34 378 2.31e-85 266
Msa0067330 AT5G01360.1 38.728 346 190 8 106 430 90 434 1.30e-84 266
Msa0067330 AT5G49340.1 38.398 362 202 8 90 430 80 441 9.36e-84 264
Msa0067330 AT3G62390.1 36.154 390 212 9 63 426 89 467 8.14e-83 262
Msa0067330 AT2G30010.1 37.838 370 197 8 90 430 31 396 7.54e-82 257
Msa0067330 AT1G73140.1 39.474 342 185 8 108 430 67 405 8.52e-82 258
Msa0067330 AT2G30010.2 37.838 370 197 8 90 430 74 439 1.25e-81 258
Msa0067330 AT2G40160.2 38.617 347 189 9 108 430 77 423 1.25e-80 256
Msa0067330 AT2G40160.1 38.329 347 190 9 108 430 77 423 3.60e-80 254
Msa0067330 AT1G60790.1 36.364 352 200 9 101 430 183 532 1.69e-79 256
Msa0067330 AT1G78710.1 34.897 341 203 7 98 430 28 357 1.22e-78 248
Msa0067330 AT3G14850.2 38.369 331 188 6 103 426 29 350 9.98e-78 245
Msa0067330 AT3G55990.1 37.719 342 192 7 106 426 138 479 1.24e-77 249
Msa0067330 AT2G40150.1 37.572 346 189 8 108 426 71 416 8.78e-77 245
Msa0067330 AT5G19160.1 36.559 372 200 9 87 430 81 444 1.63e-73 238
Msa0067330 AT2G38320.1 32.873 362 220 9 92 430 43 404 2.73e-73 236
Msa0067330 AT5G01620.2 35.278 360 211 9 90 430 93 449 8.64e-73 236
Msa0067330 AT5G01620.1 35.278 360 211 9 90 430 93 449 8.64e-73 236
Msa0067330 AT5G01620.3 35.278 360 211 9 90 430 101 457 1.06e-72 236
Msa0067330 AT5G06230.2 38.095 357 180 10 105 430 18 364 8.75e-70 225
Msa0067330 AT3G11030.1 35.838 346 196 8 108 430 106 448 8.81e-70 228
Msa0067330 AT5G06230.1 38.095 357 180 10 105 430 59 405 1.34e-69 226
Msa0067330 AT3G11570.1 35.602 382 205 12 77 430 51 419 1.43e-69 226
Msa0067330 AT3G06080.2 36.467 351 197 7 103 430 98 445 2.65e-69 227
Msa0067330 AT2G40320.1 34.615 390 214 12 73 430 42 422 5.19e-69 225
Msa0067330 AT1G48880.1 35.588 340 187 9 108 430 115 439 8.21e-67 220
Msa0067330 AT2G31110.3 40.551 254 146 4 75 325 10 261 1.13e-66 214
Msa0067330 AT2G30900.2 43.043 230 126 5 106 332 41 268 4.07e-64 207
Msa0067330 AT2G38320.2 33.540 322 191 8 131 430 1 321 5.21e-64 209
Msa0067330 AT5G58600.2 41.102 236 133 4 99 332 60 291 3.37e-63 206
Msa0067330 AT3G62390.2 36.765 272 155 4 78 332 102 373 3.46e-61 204
Msa0067330 AT2G40160.3 41.102 236 128 6 108 332 77 312 5.15e-60 198
Msa0067330 AT2G34070.2 37.308 260 146 4 177 430 1 249 3.31e-59 194
Msa0067330 AT5G20590.2 38.683 243 136 4 103 332 136 378 5.91e-56 189
Msa0067330 AT5G19160.2 37.066 259 147 4 87 332 81 336 2.46e-55 187
Msa0067330 AT1G78710.2 30.532 357 180 11 78 430 5 297 8.53e-53 179
Msa0067330 AT5G06230.3 38.057 247 134 4 105 332 59 305 1.48e-49 171
Msa0067330 AT3G06080.1 35.802 243 143 3 103 332 98 340 6.69e-49 170
Msa0067330 AT3G14850.1 36.328 256 148 5 177 426 1 247 2.37e-48 166
Msa0067330 AT2G31110.1 40.553 217 113 4 219 430 9 214 2.57e-48 164
Msa0067330 AT1G70230.1 32.486 354 187 15 108 430 79 411 2.79e-41 151
Msa0067330 AT4G25360.1 31.200 375 210 15 92 430 162 524 7.86e-41 152
Msa0067330 AT4G25360.2 31.200 375 210 15 92 430 162 524 7.86e-41 152
Msa0067330 AT1G01430.1 28.571 371 226 13 92 430 84 447 3.27e-40 149
Msa0067330 AT4G01080.1 29.060 351 210 13 104 426 87 426 5.41e-38 143
Msa0067330 AT5G51640.1 29.223 373 218 13 94 430 126 488 2.48e-37 142
Msa0067330 AT4G11090.1 29.781 366 199 16 106 430 77 425 1.12e-36 139
Msa0067330 AT5G64020.1 28.212 358 216 14 108 430 57 408 1.34e-36 139
Msa0067330 AT2G37720.1 28.814 354 211 14 106 430 141 482 3.18e-35 136
Msa0067330 AT5G64470.3 27.095 358 228 12 98 430 45 394 6.93e-35 134
Msa0067330 AT5G20680.6 27.202 386 225 18 81 430 92 457 8.03e-35 135
Msa0067330 AT5G64470.2 27.473 364 225 13 98 430 45 400 8.22e-35 134
Msa0067330 AT4G23790.1 27.062 388 208 14 89 426 61 423 1.51e-34 133
Msa0067330 AT5G20680.4 27.202 386 225 18 81 430 186 551 2.13e-34 135
Msa0067330 AT5G20680.1 27.202 386 225 18 81 430 186 551 2.13e-34 135
Msa0067330 AT5G20680.3 27.202 386 225 18 81 430 186 551 2.13e-34 135
Msa0067330 AT5G20680.5 27.202 386 225 18 81 430 186 551 2.13e-34 135
Msa0067330 AT5G20680.2 27.202 386 225 18 81 430 168 533 2.23e-34 134
Msa0067330 AT5G15900.1 28.926 363 224 11 95 430 54 409 4.83e-34 132
Msa0067330 AT5G15900.2 28.926 363 224 11 95 430 73 428 8.20e-34 132
Msa0067330 AT5G15890.1 30.000 360 203 13 102 430 181 522 2.42e-32 129
Msa0067330 AT3G02440.1 27.273 352 217 12 108 430 127 468 2.50e-31 125
Msa0067330 AT3G02440.2 27.273 352 217 12 108 430 135 476 3.10e-31 125
Msa0067330 AT2G14530.1 27.424 361 214 13 105 430 59 406 3.15e-31 124
Msa0067330 AT3G28150.1 27.778 378 209 18 94 430 56 410 9.46e-31 122
Msa0067330 AT5G64470.4 27.200 250 163 7 98 330 45 292 1.86e-23 100
Msa0067330 AT5G64470.1 27.200 250 163 7 98 330 45 292 2.22e-23 100

Find 125 sgRNAs with CRISPR-Local

Find 373 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCCTGGTGTGCCTGATATT+TGG 0.189016 1_2:-32286011 Msa0067330:CDS
AGACATCAATTGAGTTTCTT+TGG 0.205327 1_2:-32287176 Msa0067330:CDS
TGCTAGATTCTCTATTGTTT+TGG 0.225439 1_2:+32289060 None:intergenic
CTATTCTTTGTTTCTCATCT+TGG 0.240185 1_2:+32286064 None:intergenic
TAATACCAACTGGTAGAAAA+AGG 0.249328 1_2:-32287324 Msa0067330:CDS
CTTATGGTTGCTTATCAAAA+AGG 0.263528 1_2:-32286613 Msa0067330:CDS
CCACTGCACATTATCTCTTC+TGG 0.264239 1_2:-32289135 Msa0067330:CDS
AAGCTTCAACAACGACTCTT+TGG 0.267863 1_2:-32290670 Msa0067330:CDS
TTTGATGCACTAAGGTTTCT+TGG 0.268531 1_2:-32287433 Msa0067330:CDS
CATCAAATATTGTCTTAAAA+AGG 0.270453 1_2:-32285516 Msa0067330:three_prime_UTR
GCAGAAAGTTGTGCCAGTTT+TGG 0.300232 1_2:-32285644 Msa0067330:three_prime_UTR
GCTGAAGAAAATGAGATTTC+CGG 0.315862 1_2:-32286163 Msa0067330:CDS
GTTACAATGCTGCCAACTTT+AGG 0.320362 1_2:+32285857 None:intergenic
AAAATCATACTTATCCTATA+TGG 0.347597 1_2:+32285835 None:intergenic
ATTCCTCTGATTGCAGTCAT+TGG 0.349039 1_2:-32286038 Msa0067330:CDS
CTCTTCTGTGTAGGTGGAGG+GGG 0.358685 1_2:-32285595 Msa0067330:three_prime_UTR
GACATCAATTGAGTTTCTTT+GGG 0.362068 1_2:-32287175 Msa0067330:CDS
TAGAATTTAATATCGTAATT+AGG 0.362576 1_2:-32285949 Msa0067330:three_prime_UTR
GGTTCACTACCTCCTTTGTT+TGG 0.365279 1_2:-32285623 Msa0067330:three_prime_UTR
AACATCTCATTCCAAATATC+AGG 0.370214 1_2:+32286000 None:intergenic
CCACTTCCACTTCTCATAAT+CGG 0.372276 1_2:+32288920 None:intergenic
ATTTCAAATTAGTTCTTCAT+AGG 0.372382 1_2:-32290733 Msa0067330:CDS
GCATGTCACCTAGGCATAAC+AGG 0.386311 1_2:-32286522 Msa0067330:intron
AGCTTCAACAACGACTCTTT+GGG 0.386845 1_2:-32290669 Msa0067330:intron
AAACAAGAGAGTCTTACATT+TGG 0.395362 1_2:-32287118 Msa0067330:CDS
TCTTTGTTTCTCATCTTGGC+TGG 0.397185 1_2:+32286068 None:intergenic
TGGACGATGTTAACATCATC+AGG 0.399111 1_2:+32289080 None:intergenic
AGGAGGTAGTGAACCAAAAC+TGG 0.401827 1_2:+32285631 None:intergenic
CACTTCTCATAATCGGAATC+TGG 0.405623 1_2:+32288927 None:intergenic
ATTGAATGGAAGGCCATTGC+AGG 0.414061 1_2:+32287286 None:intergenic
TGCAGTCATTGGTGCCTCCC+TGG 0.417455 1_2:-32286027 Msa0067330:CDS
CTTACATTTGGATTTGATTG+AGG 0.428799 1_2:-32287106 Msa0067330:CDS
TCACTACCTCCTTTGTTTGG+TGG 0.430568 1_2:-32285620 Msa0067330:three_prime_UTR
ATGTCTTCATTACCATTGAA+TGG 0.434469 1_2:+32287272 None:intergenic
TTGAGGAGAATGCGAAGTAT+TGG 0.435112 1_2:-32287089 Msa0067330:CDS
TCATTGTCGTAATATCTTGC+AGG 0.436722 1_2:+32286136 None:intergenic
GAACTCTTCTGTGTAGGTGG+AGG 0.441370 1_2:-32285598 Msa0067330:three_prime_UTR
GTGTCAAAGCCGCTGCAGTC+TGG 0.443995 1_2:-32285733 Msa0067330:three_prime_UTR
TGGAGCACTACTAAAGGTTC+AGG 0.445699 1_2:+32286192 None:intergenic
GCAGTTACTTGTCAAAAGAA+TGG 0.450896 1_2:-32288954 Msa0067330:CDS
ATTTATATTTCTAGTCTACA+TGG 0.451415 1_2:+32285452 None:intergenic
AACTCTTCTGTGTAGGTGGA+GGG 0.455050 1_2:-32285597 Msa0067330:three_prime_UTR
TCTTGCAGTTGTGCTTGAGC+AGG 0.458357 1_2:-32290363 Msa0067330:CDS
ATGGACATCCTTCAGTGTAT+AGG 0.463306 1_2:-32286098 Msa0067330:CDS
TGGCAGCATTGTAACCATAT+AGG 0.463752 1_2:-32285849 Msa0067330:three_prime_UTR
GACTAGAAATATAAATGAAA+AGG 0.466920 1_2:-32285445 Msa0067330:three_prime_UTR
CATAGGACAACAACCAAATC+AGG 0.467136 1_2:-32290716 Msa0067330:CDS
GTAACTGCAGTACTAAGATA+AGG 0.467342 1_2:+32288969 None:intergenic
TTCCAAATATCAGGCACACC+AGG 0.469582 1_2:+32286009 None:intergenic
AGATATATTATATATTTGTC+TGG 0.470264 1_2:-32285493 Msa0067330:three_prime_UTR
TCTGTAGGTTTGATGCACTA+AGG 0.472754 1_2:-32287441 Msa0067330:intron
CAAGATGAGAAACAAAGAAT+AGG 0.477046 1_2:-32286063 Msa0067330:CDS
ACTCTTCTGTGTAGGTGGAG+GGG 0.477928 1_2:-32285596 Msa0067330:three_prime_UTR
CTTGGATTCTGCAACTTGGT+TGG 0.480932 1_2:-32285701 Msa0067330:three_prime_UTR
TGCAATGGCCTTCCATTCAA+TGG 0.483402 1_2:-32287284 Msa0067330:intron
GTACTAAGATAAGGGCAGTT+AGG 0.483942 1_2:+32288978 None:intergenic
TTGACAAACAGTTGACTAAG+AGG 0.484795 1_2:+32285895 None:intergenic
CAGTTACTTGTCAAAAGAAT+GGG 0.497842 1_2:-32288953 Msa0067330:CDS
TTGGTGGAACTCTTCTGTGT+AGG 0.501360 1_2:-32285604 Msa0067330:three_prime_UTR
GTACAAGGTGTAATACCAAC+TGG 0.502784 1_2:-32287334 Msa0067330:CDS
GTATCTTGGATTCTGCAACT+TGG 0.509061 1_2:-32285705 Msa0067330:three_prime_UTR
TAACTGCAGTACTAAGATAA+GGG 0.511515 1_2:+32288970 None:intergenic
GTAATATCTTGCAGGTATAC+CGG 0.515454 1_2:+32286144 None:intergenic
GAAAGCCAACATCATCTTGT+GGG 0.520387 1_2:+32289111 None:intergenic
TTGGCGTTCTGCTGTGGTGG+TGG 0.525232 1_2:-32285682 Msa0067330:three_prime_UTR
CTTCATTACCATTGAATGGA+AGG 0.525435 1_2:+32287276 None:intergenic
TATTTGATTCAGCTCAGTGG+TGG 0.527529 1_2:-32287047 Msa0067330:CDS
TTCAATAATGAGAAATCAGT+GGG 0.529697 1_2:-32287374 Msa0067330:CDS
CTTGGGATGGAACAACCACT+TGG 0.531140 1_2:+32288894 None:intergenic
TTGATTGTGTTCTTGAGCAA+AGG 0.535779 1_2:-32290333 Msa0067330:CDS
CTGGACCCACAAGATGATGT+TGG 0.536816 1_2:-32289116 Msa0067330:CDS
CCGATTATGAGAAGTGGAAG+TGG 0.536824 1_2:-32288920 Msa0067330:CDS
GTGGAACTCTTCTGTGTAGG+TGG 0.536904 1_2:-32285601 Msa0067330:three_prime_UTR
ACTTGGTTGGCGTTCTGCTG+TGG 0.560360 1_2:-32285688 Msa0067330:three_prime_UTR
GGGCAGTTAGGATCATAAAG+AGG 0.560599 1_2:+32288990 None:intergenic
AACTGTTTGTCAACATGTAA+CGG 0.562704 1_2:-32285885 Msa0067330:three_prime_UTR
AGGAAGAGAATCATGTTGGT+GGG 0.564160 1_2:-32287400 Msa0067330:CDS
ACTCCTTGGAGCACTACTAA+AGG 0.565747 1_2:+32286186 None:intergenic
ACTGAGCACATGGGCAAGGT+GGG 0.567314 1_2:-32286590 Msa0067330:CDS
TGGTTGGCGTTCTGCTGTGG+TGG 0.568056 1_2:-32285685 Msa0067330:three_prime_UTR
GGAAGGCCATTGCAGGTCCA+TGG 0.570480 1_2:+32287293 None:intergenic
GGCAGTTAGGATCATAAAGA+GGG 0.572794 1_2:+32288991 None:intergenic
GACCTACCATGGACCTGCAA+TGG 0.573638 1_2:-32287299 Msa0067330:CDS
GAGAAGGAAGAGAATCATGT+TGG 0.573655 1_2:-32287404 Msa0067330:CDS
ATATAGTACCTGTTATGCCT+AGG 0.573860 1_2:+32286514 None:intergenic
TCTTTAGTATGCTTAGTACA+AGG 0.583313 1_2:-32287349 Msa0067330:CDS
GTTCAGGAGCATGTTGCTGA+AGG 0.584155 1_2:+32286208 None:intergenic
CAAATCAGGCAAAAGATCAA+AGG 0.587061 1_2:-32290702 Msa0067330:CDS
GACTGAGCACATGGGCAAGG+TGG 0.587096 1_2:-32286591 Msa0067330:CDS
ATGACTGCCTTACGCAGAGA+TGG 0.588976 1_2:-32286117 Msa0067330:CDS
TTGTATTTGATTCAGCTCAG+TGG 0.592724 1_2:-32287050 Msa0067330:CDS
AGAAAGCCAACATCATCTTG+TGG 0.596913 1_2:+32289110 None:intergenic
CAAGTGGTTGTTCCATCCCA+AGG 0.598385 1_2:-32288893 Msa0067330:intron
GTAACGGAAGGACCTAAAGT+TGG 0.598411 1_2:-32285869 Msa0067330:three_prime_UTR
TAGCTTGTGTGCTTGAGCAA+AGG 0.600399 1_2:-32290303 Msa0067330:CDS
TTCTTCAGTTCAACTAACAG+TGG 0.601941 1_2:+32287150 None:intergenic
AATGACTGCAATCAGAGGAA+TGG 0.604666 1_2:+32286040 None:intergenic
AAGGACTGAGCACATGGGCA+AGG 0.610853 1_2:-32286594 Msa0067330:CDS
AGGATGTCCATCTCTGCGTA+AGG 0.610897 1_2:+32286110 None:intergenic
GGCCATTGCAGGTCCATGGT+AGG 0.611844 1_2:+32287297 None:intergenic
GAGAATGCGAAGTATTGGAG+AGG 0.611883 1_2:-32287084 Msa0067330:CDS
GTTGCCTTCCTATACACTGA+AGG 0.612680 1_2:+32286090 None:intergenic
AAGGAAGAGAATCATGTTGG+TGG 0.613045 1_2:-32287401 Msa0067330:CDS
ATTCAATAATGAGAAATCAG+TGG 0.617219 1_2:-32287375 Msa0067330:CDS
CAGATTCCGATTATGAGAAG+TGG 0.621301 1_2:-32288926 Msa0067330:CDS
GTTCTGCTGTGGTGGTGGTG+TGG 0.624388 1_2:-32285677 Msa0067330:three_prime_UTR
TCCAAATATCAGGCACACCA+GGG 0.626960 1_2:+32286010 None:intergenic
GCACCAATGACTGCAATCAG+AGG 0.627161 1_2:+32286035 None:intergenic
GAACCTTTAGTAGTGCTCCA+AGG 0.631877 1_2:-32286189 Msa0067330:CDS
ACTGAGCTGAATCAAATACA+AGG 0.634640 1_2:+32287052 None:intergenic
ATACAGGTGGGATTACTACA+AGG 0.638309 1_2:-32286665 Msa0067330:intron
AGGTGGGATTACTACAAGGA+GGG 0.648410 1_2:-32286661 Msa0067330:CDS
AGAAGAGTTCCACCAAACAA+AGG 0.651738 1_2:+32285611 None:intergenic
CCAGAAGAGATAATGTGCAG+TGG 0.657294 1_2:+32289135 None:intergenic
GTTTGTCAACATGTAACGGA+AGG 0.658423 1_2:-32285881 Msa0067330:three_prime_UTR
TTACTTGTCAAAAGAATGGG+AGG 0.658568 1_2:-32288950 Msa0067330:CDS
ACATCCTTCAGTGTATAGGA+AGG 0.659861 1_2:-32286094 Msa0067330:CDS
AGATGAACGTGAAATCAACA+TGG 0.663304 1_2:-32285784 Msa0067330:three_prime_UTR
AGAGTTCCACCAAACAAAGG+AGG 0.671784 1_2:+32285614 None:intergenic
CAGGTGGGATTACTACAAGG+AGG 0.703135 1_2:-32286662 Msa0067330:CDS
TGAACGTGAAATCAACATGG+AGG 0.717564 1_2:-32285781 Msa0067330:three_prime_UTR
AATGTGAACAGACCTTGGGA+TGG 0.727316 1_2:+32288881 None:intergenic
AAATATCAGGCACACCAGGG+AGG 0.749580 1_2:+32286013 None:intergenic
AAACTGATAATAGACTCACA+TGG 0.751169 1_2:+32285548 None:intergenic
AAGTGGAAGTGGAAGCCAAG+TGG 0.762111 1_2:-32288909 Msa0067330:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAATATTAAATATTAACA+CGG - chr1_2:32286528-32286547 Msa0067330:CDS 10.0%
!!! CTTAGATAAAATTTATATTT+TGG + chr1_2:32287492-32287511 None:intergenic 10.0%
!! TATTGAAATCTAAAAAAAAT+TGG - chr1_2:32287897-32287916 Msa0067330:intron 10.0%
!!! TAATAAATCTAGAATATATT+TGG + chr1_2:32287971-32287990 None:intergenic 10.0%
!! TTAAACCAAAAAAAAAAAGT+AGG - chr1_2:32286333-32286352 Msa0067330:intron 15.0%
!!! ATCATTTTTTTTTTTTGTAG+TGG + chr1_2:32287395-32287414 None:intergenic 15.0%
!!! AACTTTGTTTATCAATTAAA+TGG + chr1_2:32287649-32287668 None:intergenic 15.0%
!! AGATTTATTATTCAAATTTG+TGG - chr1_2:32287981-32288000 Msa0067330:intron 15.0%
!!! TTGTATTATTGTAATTTGTA+CGG - chr1_2:32288157-32288176 Msa0067330:intron 15.0%
!! TATCTACTTAAATACAAATT+TGG + chr1_2:32288556-32288575 None:intergenic 15.0%
!! TAGAATTTAATATCGTAATT+AGG - chr1_2:32290126-32290145 Msa0067330:intron 15.0%
!!! CTAATATACTTTTTGTAATT+TGG - chr1_2:32290156-32290175 Msa0067330:intron 15.0%
!! AGATATATTATATATTTGTC+TGG - chr1_2:32290582-32290601 Msa0067330:intron 15.0%
!!! ATTTCAAATTAGTTCTTCAT+AGG - chr1_2:32285342-32285361 Msa0067330:three_prime_UTR 20.0%
!! ATTACACAGAAAATTGTTTA+AGG + chr1_2:32285673-32285692 None:intergenic 20.0%
!! CTTTGTAAAAATATTGTCAT+TGG + chr1_2:32286233-32286252 None:intergenic 20.0%
!!! TTTTGGTTTAAATGTGTAAT+TGG + chr1_2:32286324-32286343 None:intergenic 20.0%
!!! TTTTAAAAGTTGTTACACTA+AGG + chr1_2:32286492-32286511 None:intergenic 20.0%
!! AACAAAGTTTACTAATCAAA+AGG - chr1_2:32287660-32287679 Msa0067330:intron 20.0%
!! GAAATCTAAAAAAAATTGGT+TGG - chr1_2:32287901-32287920 Msa0067330:intron 20.0%
!!! GACTAACATTTACAATTTTA+TGG + chr1_2:32288238-32288257 None:intergenic 20.0%
!!! ATAAAACCACAAATATTTTC+AGG + chr1_2:32288397-32288416 None:intergenic 20.0%
!!! TTTGTGGTTTTATTTTAATG+TGG - chr1_2:32288404-32288423 Msa0067330:intron 20.0%
!! CTTAAAATAAGTAAAATGGA+AGG + chr1_2:32288469-32288488 None:intergenic 20.0%
!!! CTTCCATTTTACTTATTTTA+AGG - chr1_2:32288467-32288486 Msa0067330:intron 20.0%
!! AGTCCTTAAAATAAGTAAAA+TGG + chr1_2:32288473-32288492 None:intergenic 20.0%
!! TGATTTCCGATAAAATATTA+TGG + chr1_2:32289691-32289710 None:intergenic 20.0%
!!! TACAAAAAGTATATTAGTTC+AGG + chr1_2:32290153-32290172 None:intergenic 20.0%
!! AAAATCATACTTATCCTATA+TGG + chr1_2:32290243-32290262 None:intergenic 20.0%
!! CATCAAATATTGTCTTAAAA+AGG - chr1_2:32290559-32290578 Msa0067330:intron 20.0%
!!! ATTTATATTTCTAGTCTACA+TGG + chr1_2:32290626-32290645 None:intergenic 20.0%
!! GACTAGAAATATAAATGAAA+AGG - chr1_2:32290630-32290649 Msa0067330:intron 20.0%
!!! CTGTGTAATTTTGTTTAGTT+AGG - chr1_2:32285684-32285703 Msa0067330:three_prime_UTR 25.0%
!! CAAAATTTTTACAAAGTGCA+GGG - chr1_2:32286146-32286165 Msa0067330:CDS 25.0%
! CTTGCACTTTGTAAAAATAT+TGG + chr1_2:32286179-32286198 None:intergenic 25.0%
!!! CAATATTTTTACAAAGTGCA+AGG - chr1_2:32286177-32286196 Msa0067330:CDS 25.0%
!!! CACTTTTTTTTGTTTGACAT+TGG + chr1_2:32286204-32286223 None:intergenic 25.0%
!!! ACAATATTTTTACAAAGTGC+AGG - chr1_2:32286236-32286255 Msa0067330:CDS 25.0%
!!! CAATATTTTTACAAAGTGCA+GGG - chr1_2:32286177-32286196 Msa0067330:CDS 25.0%
! AACCAAAAAAAAAAAGTAGG+TGG - chr1_2:32286336-32286355 Msa0067330:intron 25.0%
! ACCAAAAAAAAAAAGTAGGT+GGG - chr1_2:32286337-32286356 Msa0067330:intron 25.0%
!!! TCTTCTTTTTAAAGATCAGT+AGG + chr1_2:32286395-32286414 None:intergenic 25.0%
! TGATGCTTATGTTATATACT+TGG + chr1_2:32286614-32286633 None:intergenic 25.0%
! AACAACATAACATATGTGTA+TGG - chr1_2:32286734-32286753 Msa0067330:intron 25.0%
! TATAGAAGAAAACAAAAAGG+TGG + chr1_2:32287221-32287240 None:intergenic 25.0%
! GTGTATAGAAGAAAACAAAA+AGG + chr1_2:32287224-32287243 None:intergenic 25.0%
!!! TTTTTTTTTTGTAGTGGTCT+GGG + chr1_2:32287389-32287408 None:intergenic 25.0%
!!! TTTTTTTTTTTGTAGTGGTC+TGG + chr1_2:32287390-32287409 None:intergenic 25.0%
!! ACTTGTTAAGGACTAAAAAA+AGG + chr1_2:32287585-32287604 None:intergenic 25.0%
! TTTATCAATTAAATGGATGC+AGG + chr1_2:32287642-32287661 None:intergenic 25.0%
! TTAAGCCACTATTTCAATTT+CGG + chr1_2:32287709-32287728 None:intergenic 25.0%
! TAATACAAAAACCATGACTA+TGG + chr1_2:32288145-32288164 None:intergenic 25.0%
!! TATTGTAATTTGTACGGATA+TGG - chr1_2:32288163-32288182 Msa0067330:intron 25.0%
! CTTCTAACAGAAAAACTTAA+GGG + chr1_2:32288330-32288349 None:intergenic 25.0%
!!! ACAAATATTTTCAGGCAAAA+TGG + chr1_2:32288389-32288408 None:intergenic 25.0%
!! ATTTTGCCTGAAAATATTTG+TGG - chr1_2:32288388-32288407 Msa0067330:intron 25.0%
! AAAATAAGTAAAATGGAAGG+TGG + chr1_2:32288466-32288485 None:intergenic 25.0%
! GTTCTTGAAATTGTAAATGT+CGG + chr1_2:32288534-32288553 None:intergenic 25.0%
! GTAGATATATTTCAACACTT+TGG - chr1_2:32288569-32288588 Msa0067330:intron 25.0%
! ATTCAATAATGAGAAATCAG+TGG - chr1_2:32288700-32288719 Msa0067330:intron 25.0%
! TTCAATAATGAGAAATCAGT+GGG - chr1_2:32288701-32288720 Msa0067330:intron 25.0%
!!! TTGGTGTCAATAATTTACAA+AGG + chr1_2:32288853-32288872 None:intergenic 25.0%
! AAACTATCTTAGAAAGCTTA+TGG - chr1_2:32289270-32289289 Msa0067330:intron 25.0%
! AACTATCTTAGAAAGCTTAT+GGG - chr1_2:32289271-32289290 Msa0067330:intron 25.0%
!! TTCGTTAAACTTTCTAAAAG+TGG - chr1_2:32289333-32289352 Msa0067330:intron 25.0%
!!! AAATGACTTTCGTTTTTTGA+GGG + chr1_2:32289527-32289546 None:intergenic 25.0%
!!! AAAATGACTTTCGTTTTTTG+AGG + chr1_2:32289528-32289547 None:intergenic 25.0%
!! GACAAAGATAAACAAGTTTT+AGG + chr1_2:32289605-32289624 None:intergenic 25.0%
!! ACGACACCATAATATTTTAT+CGG - chr1_2:32289682-32289701 Msa0067330:intron 25.0%
!! TGTTAAGATTTAGAACTCAA+TGG + chr1_2:32289732-32289751 None:intergenic 25.0%
! AATGCCAAAAACAAAATCAT+AGG + chr1_2:32289763-32289782 None:intergenic 25.0%
! AGGATTTCATTAGAAAAAGT+TGG - chr1_2:32290314-32290333 Msa0067330:CDS 25.0%
! ATTTCATTAGAAAAAGTTGG+TGG - chr1_2:32290317-32290336 Msa0067330:CDS 25.0%
!!! AGTCTACATGGATTTTATTT+AGG + chr1_2:32290614-32290633 None:intergenic 25.0%
TCTTTCACACCTCTATATAA+AGG - chr1_2:32285450-32285469 Msa0067330:three_prime_UTR 30.0%
ATCTTCACTCCTTTATATAG+AGG + chr1_2:32285462-32285481 None:intergenic 30.0%
AACACTTGATATACAATCAG+AGG + chr1_2:32285647-32285666 None:intergenic 30.0%
TAATCAGAATCTAAATGCAG+CGG + chr1_2:32285958-32285977 None:intergenic 30.0%
ATACCAATATTTGTCCATGA+AGG + chr1_2:32286090-32286109 None:intergenic 30.0%
TCATGGACAAATATTGGTAT+TGG - chr1_2:32286090-32286109 Msa0067330:CDS 30.0%
! CCTGCACTTTGTAAAAATTT+TGG + chr1_2:32286148-32286167 None:intergenic 30.0%
! CCAAAATTTTTACAAAGTGC+AGG - chr1_2:32286145-32286164 Msa0067330:CDS 30.0%
! TGTCAAACAAAAAAAAGTGC+AGG - chr1_2:32286205-32286224 Msa0067330:CDS 30.0%
! GTCAAACAAAAAAAAGTGCA+GGG - chr1_2:32286206-32286225 Msa0067330:CDS 30.0%
!!! CACTTTTTTTTGTTTGGCAT+TGG + chr1_2:32286264-32286283 None:intergenic 30.0%
!!! ACCCACCTACTTTTTTTTTT+TGG + chr1_2:32286341-32286360 None:intergenic 30.0%
ACATTAAGTACTCTCTCTTT+CGG + chr1_2:32286368-32286387 None:intergenic 30.0%
TGCTTATGTTATATACTTGG+TGG + chr1_2:32286611-32286630 None:intergenic 30.0%
AAAGAAAGCAAATGAGTCAT+TGG + chr1_2:32286899-32286918 None:intergenic 30.0%
! TGCTAGATTCTCTATTGTTT+TGG + chr1_2:32287018-32287037 None:intergenic 30.0%
! TGACTTTTCTGTTGGAAAAT+GGG - chr1_2:32287045-32287064 Msa0067330:CDS 30.0%
TAACTGCAGTACTAAGATAA+GGG + chr1_2:32287108-32287127 None:intergenic 30.0%
CAGTTACTTGTCAAAAGAAT+GGG - chr1_2:32287122-32287141 Msa0067330:CDS 30.0%
GACAATGCATAAAATATGCA+AGG - chr1_2:32287350-32287369 Msa0067330:CDS 30.0%
TTTACTGTGCATAACAATGA+TGG + chr1_2:32287418-32287437 None:intergenic 30.0%
TAAGCCACTATTTCAATTTC+GGG + chr1_2:32287708-32287727 None:intergenic 30.0%
AAATAGTGGCTTAATGATGT+TGG - chr1_2:32287715-32287734 Msa0067330:intron 30.0%
! GATTCCTTCTGTATCAATTT+TGG - chr1_2:32287779-32287798 Msa0067330:intron 30.0%
TCAACCAAAATTGATACAGA+AGG + chr1_2:32287786-32287805 None:intergenic 30.0%
! AGTTTTTATCAACTCTGAGT+AGG - chr1_2:32288037-32288056 Msa0067330:intron 30.0%
! GTTTTTATCAACTCTGAGTA+GGG - chr1_2:32288038-32288057 Msa0067330:intron 30.0%
! TTTTTATCAACTCTGAGTAG+GGG - chr1_2:32288039-32288058 Msa0067330:intron 30.0%
TAAAAACTGAGATCAATGGA+GGG + chr1_2:32288097-32288116 None:intergenic 30.0%
TTAAAAACTGAGATCAATGG+AGG + chr1_2:32288098-32288117 None:intergenic 30.0%
GGATTAAAAACTGAGATCAA+TGG + chr1_2:32288101-32288120 None:intergenic 30.0%
AAGTTATGCATATAGGAGAT+GGG + chr1_2:32288122-32288141 None:intergenic 30.0%
ACTATGGAAGTTATGCATAT+AGG + chr1_2:32288129-32288148 None:intergenic 30.0%
AGTCTCCAAATTTCATGAAT+AGG - chr1_2:32288263-32288282 Msa0067330:intron 30.0%
AGTTGCCTATTCATGAAATT+TGG + chr1_2:32288271-32288290 None:intergenic 30.0%
CCTTCTAACAGAAAAACTTA+AGG + chr1_2:32288331-32288350 None:intergenic 30.0%
! CCTTAAGTTTTTCTGTTAGA+AGG - chr1_2:32288328-32288347 Msa0067330:intron 30.0%
TCTTTAGTATGCTTAGTACA+AGG - chr1_2:32288726-32288745 Msa0067330:intron 30.0%
TAATACCAACTGGTAGAAAA+AGG - chr1_2:32288751-32288770 Msa0067330:intron 30.0%
AATACCAACTGGTAGAAAAA+GGG - chr1_2:32288752-32288771 Msa0067330:intron 30.0%
ATGTCTTCATTACCATTGAA+TGG + chr1_2:32288806-32288825 None:intergenic 30.0%
CTATCAGAGAAAATTGTGTT+TGG + chr1_2:32288872-32288891 None:intergenic 30.0%
! CAAACACAATTTTCTCTGAT+AGG - chr1_2:32288870-32288889 Msa0067330:intron 30.0%
AGACATCAATTGAGTTTCTT+TGG - chr1_2:32288899-32288918 Msa0067330:CDS 30.0%
GACATCAATTGAGTTTCTTT+GGG - chr1_2:32288900-32288919 Msa0067330:CDS 30.0%
AAACAAGAGAGTCTTACATT+TGG - chr1_2:32288957-32288976 Msa0067330:CDS 30.0%
CTTACATTTGGATTTGATTG+AGG - chr1_2:32288969-32288988 Msa0067330:CDS 30.0%
AATGGAATGATATGAAGAGA+AGG + chr1_2:32289109-32289128 None:intergenic 30.0%
TGAGAGAGAAATTGAGAAAA+TGG + chr1_2:32289127-32289146 None:intergenic 30.0%
! ATTTTCTCAATTTCTCTCTC+AGG - chr1_2:32289126-32289145 Msa0067330:CDS 30.0%
AATAAGCCAAAATCAGCTTA+TGG - chr1_2:32289294-32289313 Msa0067330:intron 30.0%
TGCTTCTTTCTTGAAAATAC+AGG - chr1_2:32289394-32289413 Msa0067330:intron 30.0%
TTCTTTCTTGAAAATACAGG+TGG - chr1_2:32289397-32289416 Msa0067330:intron 30.0%
TCTTTCTTGAAAATACAGGT+GGG - chr1_2:32289398-32289417 Msa0067330:intron 30.0%
GATCAAAAACATGACTCTTA+TGG - chr1_2:32289446-32289465 Msa0067330:intron 30.0%
CTTATGGTTGCTTATCAAAA+AGG - chr1_2:32289462-32289481 Msa0067330:intron 30.0%
! AAGATTTAGAACTCAATGGT+TGG + chr1_2:32289728-32289747 None:intergenic 30.0%
!!! TTCGCCTATGATTTTGTTTT+TGG - chr1_2:32289756-32289775 Msa0067330:intron 30.0%
! CTATTCTTTGTTTCTCATCT+TGG + chr1_2:32290014-32290033 None:intergenic 30.0%
CAAGATGAGAAACAAAGAAT+AGG - chr1_2:32290012-32290031 Msa0067330:intron 30.0%
AACATCTCATTCCAAATATC+AGG + chr1_2:32290078-32290097 None:intergenic 30.0%
AACTGTTTGTCAACATGTAA+CGG - chr1_2:32290190-32290209 Msa0067330:intron 30.0%
AAACTGATAATAGACTCACA+TGG + chr1_2:32290530-32290549 None:intergenic 30.0%
! CTTTGATCTTTTGCCTGATT+TGG + chr1_2:32285375-32285394 None:intergenic 35.0%
CAAATCAGGCAAAAGATCAA+AGG - chr1_2:32285373-32285392 Msa0067330:three_prime_UTR 35.0%
! GAGTGAAGATCTAGAGATTT+TGG - chr1_2:32285472-32285491 Msa0067330:three_prime_UTR 35.0%
CAAATCAGATACAGACTCAA+TGG + chr1_2:32285613-32285632 None:intergenic 35.0%
TTGATTGTGTTCTTGAGCAA+AGG - chr1_2:32285742-32285761 Msa0067330:three_prime_UTR 35.0%
TACTCTTAGTGAAATCTCCT+TGG - chr1_2:32285836-32285855 Msa0067330:three_prime_UTR 35.0%
ACGACACAAAGCAATTATAC+TGG + chr1_2:32285904-32285923 None:intergenic 35.0%
! GATCAGTGTGTTCAGTTTTT+AGG - chr1_2:32286008-32286027 Msa0067330:CDS 35.0%
TGAGAAAAAACACAAGAAGG+GGG + chr1_2:32286067-32286086 None:intergenic 35.0%
GTGAGAAAAAACACAAGAAG+GGG + chr1_2:32286068-32286087 None:intergenic 35.0%
GGTGAGAAAAAACACAAGAA+GGG + chr1_2:32286069-32286088 None:intergenic 35.0%
AGGTGAGAAAAAACACAAGA+AGG + chr1_2:32286070-32286089 None:intergenic 35.0%
!!! TGTGTTTTTTCTCACCTTCA+TGG - chr1_2:32286073-32286092 Msa0067330:CDS 35.0%
TCACCTTCATGGACAAATAT+TGG - chr1_2:32286084-32286103 Msa0067330:CDS 35.0%
! TGCCAAACAAAAAAAAGTGC+AGG - chr1_2:32286265-32286284 Msa0067330:intron 35.0%
! GCCAAACAAAAAAAAGTGCA+GGG - chr1_2:32286266-32286285 Msa0067330:intron 35.0%
!!! TCCCTGCACTTTTTTTTGTT+TGG + chr1_2:32286210-32286229 None:intergenic 35.0%
!! CTTTCAACAGATTTTGGCAT+TGG + chr1_2:32286293-32286312 None:intergenic 35.0%
! CTTGCACTTTCAACAGATTT+TGG + chr1_2:32286299-32286318 None:intergenic 35.0%
! CAAAATCTGTTGAAAGTGCA+AGG - chr1_2:32286297-32286316 Msa0067330:intron 35.0%
! ATACTTGGTGGCATTTAACA+TGG + chr1_2:32286599-32286618 None:intergenic 35.0%
TTTCATCAAGGCATGATTTG+CGG + chr1_2:32286780-32286799 None:intergenic 35.0%
! GGAAGTAAAGTGTTTCATCA+AGG + chr1_2:32286792-32286811 None:intergenic 35.0%
TTATGTAGAGTGAAAAGGGT+TGG + chr1_2:32286819-32286838 None:intergenic 35.0%
AGGGTTATGTAGAGTGAAAA+GGG + chr1_2:32286823-32286842 None:intergenic 35.0%
TAGGGTTATGTAGAGTGAAA+AGG + chr1_2:32286824-32286843 None:intergenic 35.0%
! AAGAGATGTGACTTTTCTGT+TGG - chr1_2:32287037-32287056 Msa0067330:CDS 35.0%
! GTGACTTTTCTGTTGGAAAA+TGG - chr1_2:32287044-32287063 Msa0067330:CDS 35.0%
GTAACTGCAGTACTAAGATA+AGG + chr1_2:32287109-32287128 None:intergenic 35.0%
GCAGTTACTTGTCAAAAGAA+TGG - chr1_2:32287121-32287140 Msa0067330:CDS 35.0%
TTACTTGTCAAAAGAATGGG+AGG - chr1_2:32287125-32287144 Msa0067330:CDS 35.0%
TGCATAAAATATGCAAGGTC+CGG - chr1_2:32287355-32287374 Msa0067330:CDS 35.0%
TAGTCCTTAACAAGTGTCTT+CGG - chr1_2:32287590-32287609 Msa0067330:intron 35.0%
TCAAAAGGAACCACACTTTA+AGG - chr1_2:32287675-32287694 Msa0067330:intron 35.0%
CAAACCCGAAATTGAAATAG+TGG - chr1_2:32287701-32287720 Msa0067330:intron 35.0%
ATATTTGGCTACTTGTGTCA+AGG + chr1_2:32287956-32287975 None:intergenic 35.0%
GAAGTTATGCATATAGGAGA+TGG + chr1_2:32288123-32288142 None:intergenic 35.0%
ATGCATAACTTCCATAGTCA+TGG - chr1_2:32288131-32288150 Msa0067330:intron 35.0%
AGCTAGTTAAGTTTACAAGC+AGG + chr1_2:32288607-32288626 None:intergenic 35.0%
! AACTAGCTTATTACCTCTGT+AGG - chr1_2:32288619-32288638 Msa0067330:intron 35.0%
TTTGATGCACTAAGGTTTCT+TGG - chr1_2:32288642-32288661 Msa0067330:intron 35.0%
GGTTTCTTGGAAAAATGAGA+AGG - chr1_2:32288655-32288674 Msa0067330:intron 35.0%
CTTCATTACCATTGAATGGA+AGG + chr1_2:32288802-32288821 None:intergenic 35.0%
TTCTTCAGTTCAACTAACAG+TGG + chr1_2:32288928-32288947 None:intergenic 35.0%
!!! TGTAAGACTCTCTTGTTTTC+TGG + chr1_2:32288955-32288974 None:intergenic 35.0%
ACTGAGCTGAATCAAATACA+AGG + chr1_2:32289026-32289045 None:intergenic 35.0%
TTGTATTTGATTCAGCTCAG+TGG - chr1_2:32289025-32289044 Msa0067330:CDS 35.0%
!!! TCCTTACGAGCTTGTTTTAT+CGG + chr1_2:32289061-32289080 None:intergenic 35.0%
CAAAATCAGCTTATGGACAT+GGG - chr1_2:32289301-32289320 Msa0067330:intron 35.0%
ATATAGTACCTGTTATGCCT+AGG + chr1_2:32289564-32289583 None:intergenic 35.0%
! ACCAAGTGAAGTTGATTACA+TGG - chr1_2:32289654-32289673 Msa0067330:intron 35.0%
TCCATGTAATCAACTTCACT+TGG + chr1_2:32289658-32289677 None:intergenic 35.0%
! TTAGAACTCAATGGTTGGTT+TGG + chr1_2:32289723-32289742 None:intergenic 35.0%
!!! GGTTTTTTATGCAGGGAAAA+TGG - chr1_2:32289802-32289821 Msa0067330:intron 35.0%
GCTGAAGAAAATGAGATTTC+CGG - chr1_2:32289912-32289931 Msa0067330:intron 35.0%
GTAATATCTTGCAGGTATAC+CGG + chr1_2:32289934-32289953 None:intergenic 35.0%
TCATTGTCGTAATATCTTGC+AGG + chr1_2:32289942-32289961 None:intergenic 35.0%
TTGACAAACAGTTGACTAAG+AGG + chr1_2:32290183-32290202 None:intergenic 35.0%
AGATGAACGTGAAATCAACA+TGG - chr1_2:32290291-32290310 Msa0067330:CDS 35.0%
!! TCATTAGAAAAAGTTGGTGG+AGG - chr1_2:32290320-32290339 Msa0067330:CDS 35.0%
CATAGGACAACAACCAAATC+AGG - chr1_2:32285359-32285378 Msa0067330:three_prime_UTR 40.0%
AAGCTTCAACAACGACTCTT+TGG - chr1_2:32285405-32285424 Msa0067330:three_prime_UTR 40.0%
AGCTTCAACAACGACTCTTT+GGG - chr1_2:32285406-32285425 Msa0067330:three_prime_UTR 40.0%
GAACAGTTTCAGCAGAGATT+TGG + chr1_2:32285536-32285555 None:intergenic 40.0%
! AAATCTCCTTGGAAGTGCAA+GGG - chr1_2:32285847-32285866 Msa0067330:three_prime_UTR 40.0%
GAGAAAAAACACAAGAAGGG+GGG + chr1_2:32286066-32286085 None:intergenic 40.0%
GTATCAATTACTGCAGTGTC+AGG - chr1_2:32286697-32286716 Msa0067330:intron 40.0%
! TTCATCAAGGCATGATTTGC+GGG + chr1_2:32286779-32286798 None:intergenic 40.0%
GAGTGAGTTAAGGAAGAGTA+GGG + chr1_2:32286842-32286861 None:intergenic 40.0%
TGAGTGAGTTAAGGAAGAGT+AGG + chr1_2:32286843-32286862 None:intergenic 40.0%
AGTGTGAAGTGAGTGAGTTA+AGG + chr1_2:32286852-32286871 None:intergenic 40.0%
GAAAGCCAACATCATCTTGT+GGG + chr1_2:32286967-32286986 None:intergenic 40.0%
AGAAAGCCAACATCATCTTG+TGG + chr1_2:32286968-32286987 None:intergenic 40.0%
TGGACGATGTTAACATCATC+AGG + chr1_2:32286998-32287017 None:intergenic 40.0%
GGCAGTTAGGATCATAAAGA+GGG + chr1_2:32287087-32287106 None:intergenic 40.0%
GTACTAAGATAAGGGCAGTT+AGG + chr1_2:32287100-32287119 None:intergenic 40.0%
CACTTCTCATAATCGGAATC+TGG + chr1_2:32287151-32287170 None:intergenic 40.0%
CAGATTCCGATTATGAGAAG+TGG - chr1_2:32287149-32287168 Msa0067330:CDS 40.0%
CCACTTCCACTTCTCATAAT+CGG + chr1_2:32287158-32287177 None:intergenic 40.0%
GCATAAAATATGCAAGGTCC+GGG - chr1_2:32287356-32287375 Msa0067330:CDS 40.0%
CATAAAATATGCAAGGTCCG+GGG - chr1_2:32287357-32287376 Msa0067330:CDS 40.0%
! CTTAAGAAAAGCACGCTCTA+AGG + chr1_2:32287748-32287767 None:intergenic 40.0%
! CTTAGAGCGTGCTTTTCTTA+AGG - chr1_2:32287746-32287765 Msa0067330:intron 40.0%
AATCTCACTATCACTTGTGG+GGG + chr1_2:32287844-32287863 None:intergenic 40.0%
CAATCTCACTATCACTTGTG+GGG + chr1_2:32287845-32287864 None:intergenic 40.0%
CCAATCTCACTATCACTTGT+GGG + chr1_2:32287846-32287865 None:intergenic 40.0%
TCCAATCTCACTATCACTTG+TGG + chr1_2:32287847-32287866 None:intergenic 40.0%
GTGGATGATGAGTTTGTGAA+TGG - chr1_2:32288193-32288212 Msa0067330:intron 40.0%
TTAGTGCATCAAACCTACAG+AGG + chr1_2:32288635-32288654 None:intergenic 40.0%
TCTGTAGGTTTGATGCACTA+AGG - chr1_2:32288634-32288653 Msa0067330:intron 40.0%
GAGAAGGAAGAGAATCATGT+TGG - chr1_2:32288671-32288690 Msa0067330:intron 40.0%
AAGGAAGAGAATCATGTTGG+TGG - chr1_2:32288674-32288693 Msa0067330:intron 40.0%
AGGAAGAGAATCATGTTGGT+GGG - chr1_2:32288675-32288694 Msa0067330:intron 40.0%
GTACAAGGTGTAATACCAAC+TGG - chr1_2:32288741-32288760 Msa0067330:intron 40.0%
TTGAGGAGAATGCGAAGTAT+TGG - chr1_2:32288986-32289005 Msa0067330:CDS 40.0%
TATTTGATTCAGCTCAGTGG+TGG - chr1_2:32289028-32289047 Msa0067330:CDS 40.0%
TCCGATAAAACAAGCTCGTA+AGG - chr1_2:32289057-32289076 Msa0067330:CDS 40.0%
GGAATGATATGAAGAGAAGG+TGG + chr1_2:32289106-32289125 None:intergenic 40.0%
!! CCATGTCCATAAGCTGATTT+TGG + chr1_2:32289303-32289322 None:intergenic 40.0%
CCAAAATCAGCTTATGGACA+TGG - chr1_2:32289300-32289319 Msa0067330:intron 40.0%
ATACAGGTGGGATTACTACA+AGG - chr1_2:32289410-32289429 Msa0067330:intron 40.0%
ATCAAAAAGGACTGAGCACA+TGG - chr1_2:32289475-32289494 Msa0067330:intron 40.0%
TCAAAAAGGACTGAGCACAT+GGG - chr1_2:32289476-32289495 Msa0067330:intron 40.0%
!! TTTTCAGAAGCATGTCACCT+AGG - chr1_2:32289544-32289563 Msa0067330:intron 40.0%
! ACTTGGTGAGATGTAAGACT+TGG + chr1_2:32289641-32289660 None:intergenic 40.0%
ATTTCACTGTCTCTAGCGAT+TGG - chr1_2:32289780-32289799 Msa0067330:intron 40.0%
TTTCACTGTCTCTAGCGATT+GGG - chr1_2:32289781-32289800 Msa0067330:intron 40.0%
!!! AGCGATTGGGTTTTTTATGC+AGG - chr1_2:32289794-32289813 Msa0067330:intron 40.0%
!!! GCGATTGGGTTTTTTATGCA+GGG - chr1_2:32289795-32289814 Msa0067330:intron 40.0%
TGAAGGCTGAAAAATGGTAG+AGG + chr1_2:32289853-32289872 None:intergenic 40.0%
TGTTGCTGAAGGCTGAAAAA+TGG + chr1_2:32289859-32289878 None:intergenic 40.0%
! TCATTTTCTTCAGCACTCCT+TGG + chr1_2:32289906-32289925 None:intergenic 40.0%
ATGGACATCCTTCAGTGTAT+AGG - chr1_2:32289977-32289996 Msa0067330:intron 40.0%
ACATCCTTCAGTGTATAGGA+AGG - chr1_2:32289981-32290000 Msa0067330:intron 40.0%
! TCTTTGTTTCTCATCTTGGC+TGG + chr1_2:32290010-32290029 None:intergenic 40.0%
AATGACTGCAATCAGAGGAA+TGG + chr1_2:32290038-32290057 None:intergenic 40.0%
ATTCCTCTGATTGCAGTCAT+TGG - chr1_2:32290037-32290056 Msa0067330:intron 40.0%
! GTTTGTCAACATGTAACGGA+AGG - chr1_2:32290194-32290213 Msa0067330:intron 40.0%
GTTACAATGCTGCCAACTTT+AGG + chr1_2:32290221-32290240 None:intergenic 40.0%
TGGCAGCATTGTAACCATAT+AGG - chr1_2:32290226-32290245 Msa0067330:intron 40.0%
TGAACGTGAAATCAACATGG+AGG - chr1_2:32290294-32290313 Msa0067330:CDS 40.0%
ATACAAAAACCAGACTGCAG+CGG + chr1_2:32290354-32290373 None:intergenic 40.0%
!!! GCAGTCTGGTTTTTGTATCT+TGG - chr1_2:32290356-32290375 Msa0067330:CDS 40.0%
GTATCTTGGATTCTGCAACT+TGG - chr1_2:32290370-32290389 Msa0067330:CDS 40.0%
AGAAGAGTTCCACCAAACAA+AGG + chr1_2:32290467-32290486 None:intergenic 40.0%
! TAGCTTGTGTGCTTGAGCAA+AGG - chr1_2:32285772-32285791 Msa0067330:three_prime_UTR 45.0%
! GAAATCTCCTTGGAAGTGCA+AGG - chr1_2:32285846-32285865 Msa0067330:three_prime_UTR 45.0%
! AATCTCCTTGGAAGTGCAAG+GGG - chr1_2:32285848-32285867 Msa0067330:three_prime_UTR 45.0%
!! TACTGGTTCCTTCCACAAAC+CGG + chr1_2:32285887-32285906 None:intergenic 45.0%
!! ATATTGGTATTGGTGCCACG+TGG - chr1_2:32286100-32286119 Msa0067330:CDS 45.0%
CCACGTGGCATGAAATGATT+GGG - chr1_2:32286115-32286134 Msa0067330:CDS 45.0%
GTCTTAAGACCGTTCGCAAT+GGG + chr1_2:32286422-32286441 None:intergenic 45.0%
TGTCTTAAGACCGTTCGCAA+TGG + chr1_2:32286423-32286442 None:intergenic 45.0%
! TCATCAAGGCATGATTTGCG+GGG + chr1_2:32286778-32286797 None:intergenic 45.0%
!! AGAGTGAAAAGGGTTGGTGT+TGG + chr1_2:32286813-32286832 None:intergenic 45.0%
GTTGCCATGGAAGAAGCTAA+GGG + chr1_2:32286875-32286894 None:intergenic 45.0%
TGTTGCCATGGAAGAAGCTA+AGG + chr1_2:32286876-32286895 None:intergenic 45.0%
!! ATGAGTCATTGGTGTTGCCA+TGG + chr1_2:32286888-32286907 None:intergenic 45.0%
CCAGAAGAGATAATGTGCAG+TGG + chr1_2:32286943-32286962 None:intergenic 45.0%
CCACTGCACATTATCTCTTC+TGG - chr1_2:32286940-32286959 Msa0067330:intron 45.0%
GGGCAGTTAGGATCATAAAG+AGG + chr1_2:32287088-32287107 None:intergenic 45.0%
CCGATTATGAGAAGTGGAAG+TGG - chr1_2:32287155-32287174 Msa0067330:CDS 45.0%
AATGTGAACAGACCTTGGGA+TGG + chr1_2:32287197-32287216 None:intergenic 45.0%
TGGCAATGTGAACAGACCTT+GGG + chr1_2:32287201-32287220 None:intergenic 45.0%
TAAGCTCACGAGGACAATGA+TGG + chr1_2:32287316-32287335 None:intergenic 45.0%
TGAGCTTAGCTCAGTTGGTT+GGG - chr1_2:32287328-32287347 Msa0067330:CDS 45.0%
! TGCTCCGAAGACACTTGTTA+AGG + chr1_2:32287597-32287616 None:intergenic 45.0%
! GGGTTTGAGACCTTAAAGTG+TGG + chr1_2:32287688-32287707 None:intergenic 45.0%
! CCCACAAGTGATAGTGAGAT+TGG - chr1_2:32287843-32287862 Msa0067330:intron 45.0%
GATAGTGAGATTGGATCTCC+CGG - chr1_2:32287852-32287871 Msa0067330:intron 45.0%
!! ATTGGATCTCCCGGATTAGT+CGG - chr1_2:32287861-32287880 Msa0067330:intron 45.0%
AGCCTAAAGACCGACTAATC+CGG + chr1_2:32287874-32287893 None:intergenic 45.0%
AACTGAGATCAATGGAGGGT+TGG + chr1_2:32288093-32288112 None:intergenic 45.0%
GTACGGATATGGTAAGCTTG+TGG - chr1_2:32288174-32288193 Msa0067330:intron 45.0%
!! GTCCTTGTGACTTGGTATTG+CGG + chr1_2:32288367-32288386 None:intergenic 45.0%
GCAAAATGGTCCTTGTGACT+TGG + chr1_2:32288375-32288394 None:intergenic 45.0%
! GTCACCCTTTTTCTACCAGT+TGG + chr1_2:32288759-32288778 None:intergenic 45.0%
AGAAAAAGGGTGACCTACCA+TGG - chr1_2:32288765-32288784 Msa0067330:intron 45.0%
ATTGAATGGAAGGCCATTGC+AGG + chr1_2:32288792-32288811 None:intergenic 45.0%
TGCAATGGCCTTCCATTCAA+TGG - chr1_2:32288791-32288810 Msa0067330:intron 45.0%
!! GAGAATGCGAAGTATTGGAG+AGG - chr1_2:32288991-32289010 Msa0067330:CDS 45.0%
AGGTGGGATTACTACAAGGA+GGG - chr1_2:32289414-32289433 Msa0067330:intron 45.0%
! TGGAGCACTACTAAAGGTTC+AGG + chr1_2:32289886-32289905 None:intergenic 45.0%
GAACCTTTAGTAGTGCTCCA+AGG - chr1_2:32289886-32289905 Msa0067330:intron 45.0%
! ACTCCTTGGAGCACTACTAA+AGG + chr1_2:32289892-32289911 None:intergenic 45.0%
GTTGCCTTCCTATACACTGA+AGG + chr1_2:32289988-32290007 None:intergenic 45.0%
TCCAAATATCAGGCACACCA+GGG + chr1_2:32290068-32290087 None:intergenic 45.0%
TTCCAAATATCAGGCACACC+AGG + chr1_2:32290069-32290088 None:intergenic 45.0%
! GTAACGGAAGGACCTAAAGT+TGG - chr1_2:32290206-32290225 Msa0067330:intron 45.0%
CTTGGATTCTGCAACTTGGT+TGG - chr1_2:32290374-32290393 Msa0067330:CDS 45.0%
! GCAGAAAGTTGTGCCAGTTT+TGG - chr1_2:32290431-32290450 Msa0067330:intron 45.0%
AGGAGGTAGTGAACCAAAAC+TGG + chr1_2:32290447-32290466 None:intergenic 45.0%
GGTTCACTACCTCCTTTGTT+TGG - chr1_2:32290452-32290471 Msa0067330:intron 45.0%
! TCACTACCTCCTTTGTTTGG+TGG - chr1_2:32290455-32290474 Msa0067330:intron 45.0%
AGAGTTCCACCAAACAAAGG+AGG + chr1_2:32290464-32290483 None:intergenic 45.0%
TTGGTGGAACTCTTCTGTGT+AGG - chr1_2:32290471-32290490 Msa0067330:intron 45.0%
AACTCTTCTGTGTAGGTGGA+GGG - chr1_2:32290478-32290497 Msa0067330:intron 45.0%
AACAACGACTCTTTGGGTGC+TGG - chr1_2:32285412-32285431 Msa0067330:three_prime_UTR 50.0%
TCTTGCAGTTGTGCTTGAGC+AGG - chr1_2:32285712-32285731 Msa0067330:three_prime_UTR 50.0%
! ATCTCCTTGGAAGTGCAAGG+GGG - chr1_2:32285849-32285868 Msa0067330:three_prime_UTR 50.0%
! ACTGGACTACTTCCGGTTTG+TGG - chr1_2:32285872-32285891 Msa0067330:three_prime_UTR 50.0%
! GACTACTTCCGGTTTGTGGA+AGG - chr1_2:32285876-32285895 Msa0067330:three_prime_UTR 50.0%
GCCACGTGGCATGAAATGAT+TGG - chr1_2:32286114-32286133 Msa0067330:CDS 50.0%
CCCAATCATTTCATGCCACG+TGG + chr1_2:32286118-32286137 None:intergenic 50.0%
GAAGATCCTCCCATTGCGAA+CGG - chr1_2:32286410-32286429 Msa0067330:intron 50.0%
TTAAGACCGTTCGCAATGGG+AGG + chr1_2:32286419-32286438 None:intergenic 50.0%
CACTCCCTTAGCTTCTTCCA+TGG - chr1_2:32286868-32286887 Msa0067330:intron 50.0%
CTGGACCCACAAGATGATGT+TGG - chr1_2:32286959-32286978 Msa0067330:intron 50.0%
AAGTGGAAGTGGAAGCCAAG+TGG - chr1_2:32287166-32287185 Msa0067330:CDS 50.0%
CTTGGGATGGAACAACCACT+TGG + chr1_2:32287184-32287203 None:intergenic 50.0%
CAAGTGGTTGTTCCATCCCA+AGG - chr1_2:32287182-32287201 Msa0067330:CDS 50.0%
GTGGCAATGTGAACAGACCT+TGG + chr1_2:32287202-32287221 None:intergenic 50.0%
GTGAGCTTAGCTCAGTTGGT+TGG - chr1_2:32287327-32287346 Msa0067330:CDS 50.0%
ATGTTAACGTGCGCTCTCTG+TGG - chr1_2:32287452-32287471 Msa0067330:intron 50.0%
!! TCCCGGATTAGTCGGTCTTT+AGG - chr1_2:32287869-32287888 Msa0067330:intron 50.0%
GCCTAAAGACCGACTAATCC+GGG + chr1_2:32287873-32287892 None:intergenic 50.0%
!! GGATTAGTCGGTCTTTAGGC+TGG - chr1_2:32287873-32287892 Msa0067330:intron 50.0%
ATCAACTCTGAGTAGGGGAG+TGG - chr1_2:32288044-32288063 Msa0067330:intron 50.0%
TGAGTAGGGGAGTGGAATGT+GGG - chr1_2:32288052-32288071 Msa0067330:intron 50.0%
CAGGTGGGATTACTACAAGG+AGG - chr1_2:32289413-32289432 Msa0067330:intron 50.0%
GCATGTCACCTAGGCATAAC+AGG - chr1_2:32289553-32289572 Msa0067330:intron 50.0%
! GTTCAGGAGCATGTTGCTGA+AGG + chr1_2:32289870-32289889 None:intergenic 50.0%
ATGACTGCCTTACGCAGAGA+TGG - chr1_2:32289958-32289977 Msa0067330:intron 50.0%
AGGATGTCCATCTCTGCGTA+AGG + chr1_2:32289968-32289987 None:intergenic 50.0%
GCACCAATGACTGCAATCAG+AGG + chr1_2:32290043-32290062 None:intergenic 50.0%
AAATATCAGGCACACCAGGG+AGG + chr1_2:32290065-32290084 None:intergenic 50.0%
TCCCTGGTGTGCCTGATATT+TGG - chr1_2:32290064-32290083 Msa0067330:intron 50.0%
GTGGAACTCTTCTGTGTAGG+TGG - chr1_2:32290474-32290493 Msa0067330:intron 50.0%
GAACTCTTCTGTGTAGGTGG+AGG - chr1_2:32290477-32290496 Msa0067330:intron 50.0%
ACTCTTCTGTGTAGGTGGAG+GGG - chr1_2:32290479-32290498 Msa0067330:intron 50.0%
AAGGGGGACTGGACTACTTC+CGG - chr1_2:32285865-32285884 Msa0067330:three_prime_UTR 55.0%
! ATGATTTGCGGGGTGGTGTG+TGG + chr1_2:32286768-32286787 None:intergenic 55.0%
! TCAAGGCATGATTTGCGGGG+TGG + chr1_2:32286775-32286794 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+AGG + chr1_2:32287326-32287345 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG - chr1_2:32287323-32287342 Msa0067330:CDS 55.0%
CTGAGTAGGGGAGTGGAATG+TGG - chr1_2:32288051-32288070 Msa0067330:intron 55.0%
CGCCGCAATACCAAGTCACA+AGG - chr1_2:32288362-32288381 Msa0067330:intron 55.0%
GACCTACCATGGACCTGCAA+TGG - chr1_2:32288776-32288795 Msa0067330:intron 55.0%
AAGGACTGAGCACATGGGCA+AGG - chr1_2:32289481-32289500 Msa0067330:intron 55.0%
ACTGAGCACATGGGCAAGGT+GGG - chr1_2:32289485-32289504 Msa0067330:intron 55.0%
ACTTGGTTGGCGTTCTGCTG+TGG - chr1_2:32290387-32290406 Msa0067330:intron 55.0%
CTCTTCTGTGTAGGTGGAGG+GGG - chr1_2:32290480-32290499 Msa0067330:intron 55.0%
CAGTCCCCCTTGCACTTCCA+AGG + chr1_2:32285856-32285875 None:intergenic 60.0%
! CTTGGAAGTGCAAGGGGGAC+TGG - chr1_2:32285854-32285873 Msa0067330:three_prime_UTR 60.0%
AGTGGTCTGGGCTTGAACCC+CGG + chr1_2:32287377-32287396 None:intergenic 60.0%
GGCCATTGCAGGTCCATGGT+AGG + chr1_2:32288781-32288800 None:intergenic 60.0%
GGAAGGCCATTGCAGGTCCA+TGG + chr1_2:32288785-32288804 None:intergenic 60.0%
GACTGAGCACATGGGCAAGG+TGG - chr1_2:32289484-32289503 Msa0067330:intron 60.0%
! TGCAGTCATTGGTGCCTCCC+TGG - chr1_2:32290048-32290067 Msa0067330:intron 60.0%
GTGTCAAAGCCGCTGCAGTC+TGG - chr1_2:32290342-32290361 Msa0067330:CDS 60.0%
TGGTTGGCGTTCTGCTGTGG+TGG - chr1_2:32290390-32290409 Msa0067330:intron 60.0%
TTGGCGTTCTGCTGTGGTGG+TGG - chr1_2:32290393-32290412 Msa0067330:intron 60.0%
!! GTTCTGCTGTGGTGGTGGTG+TGG - chr1_2:32290398-32290417 Msa0067330:intron 60.0%
TGTGTAGGTGGAGGGGGCTT+TGG - chr1_2:32290486-32290505 Msa0067330:intron 60.0%
! GTGGAGGGGGCTTTGGTGTG+TGG - chr1_2:32290493-32290512 Msa0067330:intron 65.0%
GCGGGGTGGTGTGTGGAGTG+TGG + chr1_2:32286761-32286780 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 32285338 32290759 32285338 ID=Msa0067330;Name=Msa0067330
chr1_2 mRNA 32285338 32290759 32285338 ID=Msa0067330-mRNA-1;Parent=Msa0067330;Name=Msa0067330-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0.66|0.57|0.71|1|1|7|646|430
chr1_2 exon 32285338 32286281 32285338 ID=Msa0067330-mRNA-1:exon:10600;Parent=Msa0067330-mRNA-1
chr1_2 exon 32286523 32286681 32286523 ID=Msa0067330-mRNA-1:exon:10599;Parent=Msa0067330-mRNA-1
chr1_2 exon 32287024 32287205 32287024 ID=Msa0067330-mRNA-1:exon:10598;Parent=Msa0067330-mRNA-1
chr1_2 exon 32287285 32287456 32287285 ID=Msa0067330-mRNA-1:exon:10597;Parent=Msa0067330-mRNA-1
chr1_2 exon 32288894 32289163 32288894 ID=Msa0067330-mRNA-1:exon:10596;Parent=Msa0067330-mRNA-1
chr1_2 exon 32290274 32290395 32290274 ID=Msa0067330-mRNA-1:exon:10595;Parent=Msa0067330-mRNA-1
chr1_2 exon 32290670 32290759 32290670 ID=Msa0067330-mRNA-1:exon:10594;Parent=Msa0067330-mRNA-1
chr1_2 CDS 32290670 32290759 32290670 ID=Msa0067330-mRNA-1:cds;Parent=Msa0067330-mRNA-1
chr1_2 CDS 32290274 32290395 32290274 ID=Msa0067330-mRNA-1:cds;Parent=Msa0067330-mRNA-1
chr1_2 CDS 32288894 32289163 32288894 ID=Msa0067330-mRNA-1:cds;Parent=Msa0067330-mRNA-1
chr1_2 CDS 32287285 32287456 32287285 ID=Msa0067330-mRNA-1:cds;Parent=Msa0067330-mRNA-1
chr1_2 CDS 32287024 32287205 32287024 ID=Msa0067330-mRNA-1:cds;Parent=Msa0067330-mRNA-1
chr1_2 CDS 32286523 32286681 32286523 ID=Msa0067330-mRNA-1:cds;Parent=Msa0067330-mRNA-1
chr1_2 CDS 32285984 32286281 32285984 ID=Msa0067330-mRNA-1:cds;Parent=Msa0067330-mRNA-1
chr1_2 three_prime_UTR 32285338 32285983 32285338 ID=Msa0067330-mRNA-1:three_prime_utr;Parent=Msa0067330-mRNA-1
Gene Sequence

>Msa0067330

ATGGATTTCAAATTAGTTCTTCATAGGACAACAACCAAATCAGGCAAAAGATCAAAGGTGAAAGATCAAGCTTCAACAACGACTCTTTGGTTAGGAAGTCTCTTGCAGTTGTGCTTGAGCAGGAAGTCTCTTGATTGTGTTCTTGAGCAAAGGAAGTCTCTAGCTTGTGTGCTTGAGCAAAGGAAGTCTCTTGCTTGTGTGCTTGAGCAATTCATCTTCCACTGCACATTATCTCTTCTGGACCCACAAGATGATGTTGGCTTTCTAGTTGAACCTGATGATGTTAACATCGTCCAAAACAATAGAGAATCTAGCAAGAGATGTGACTTTTCTGTTGGAAAATGGGTTTATGATGAATCTTACCCTCTTTATGATCCTAACTGCCCTTATCTTAGTACTGCAGTTACTTGTCAAAAGAATGGGAGGCCAGATTCCGATTATGAGAAGTGGAAGTGGAAGCCAAGTGGTTGTTCCATCCCAAGGTTTGATGCACTAAGGTTTCTTGGAAAAATGAGAAGGAAGAGAATCATGTTGGTGGGTGATTCAATAATGAGAAATCAGTGGGAATCTTTAGTATGCTTAGTACAAGGTGTAATACCAACTGGTAGAAAAAGGGTGACCTACCATGGACCTGCAATGGCCTTCCATTCAATGGATTTTGAGACATCAATTGAGTTTCTTTGGGCACCACTGTTAGTTGAACTGAAGAAAAGTCCAGAAAACAAGAGAGTCTTACATTTGGATTTGATTGAGGAGAATGCGAAGTATTGGAGAGGAGTTGATATCCTTGTATTTGATTCAGCTCAGTGGTGGACTCACTCCGATAAAACAAGCTCGTGGGATTACTACAAGGAGGGAAATAATCTGATCAAAAACATGACTCTTATGGTTGCTTATCAAAAAGGACTGAGCACATGGGCAAGGTGGGTCGATCTAAATCTAAACCCTCAAAAAACGAAAGTCATTTTCAGAAGCATGTCACCTAGGCATAACAGGGAAAATGGTTCGAAATGCGACAATCAGAAACAACCTCTACCATTTTTCAGCCTTCAGCAACATGCTCCTGAACCTTTAGTAGTGCTCCAAGGAGTGCTGAAGAAAATGAGATTTCCGGTATACCTGCAAGATATTACGACAATGACTGCCTTACGCAGAGATGGACATCCTTCAGTGTATAGGAAGGCAACCAGCCAAGATGAGAAACAAAGAATAGGCCATTCCTCTGATTGCAGTCATTGGTGCCTCCCTGGTGTGCCTGATATTTGGAATGAGATGTTGAGTGCGCTGCTTTGA

Protein sequence

>Msa0067330

MDFKLVLHRTTTKSGKRSKVKDQASTTTLWLGSLLQLCLSRKSLDCVLEQRKSLACVLEQRKSLACVLEQFIFHCTLSLLDPQDDVGFLVEPDDVNIVQNNRESSKRCDFSVGKWVYDESYPLYDPNCPYLSTAVTCQKNGRPDSDYEKWKWKPSGCSIPRFDALRFLGKMRRKRIMLVGDSIMRNQWESLVCLVQGVIPTGRKRVTYHGPAMAFHSMDFETSIEFLWAPLLVELKKSPENKRVLHLDLIEENAKYWRGVDILVFDSAQWWTHSDKTSSWDYYKEGNNLIKNMTLMVAYQKGLSTWARWVDLNLNPQKTKVIFRSMSPRHNRENGSKCDNQKQPLPFFSLQQHAPEPLVVLQGVLKKMRFPVYLQDITTMTALRRDGHPSVYRKATSQDEKQRIGHSSDCSHWCLPGVPDIWNEMLSALL*