Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0850150 | KAG2660576.1 | 100.000 | 103 | 0 | 0 | 1 | 103 | 28 | 130 | 9.14e-66 | 204 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0850150 | sp|P0CG89|H4_SOYBN | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 3.06e-67 | 199 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0850150 | A0A453MZH1 | 100.000 | 103 | 0 | 0 | 1 | 103 | 31 | 133 | 3.54e-66 | 204 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003220 | Msa0850150 | 0.815348 | 9.680907e-52 | -8.615850e-47 |
| Msa0003270 | Msa0850150 | 0.806887 | 6.612504e-50 | -8.615850e-47 |
| Msa0004540 | Msa0850150 | 0.835297 | 1.821227e-56 | -8.615850e-47 |
| Msa0005000 | Msa0850150 | -0.804235 | 2.380945e-49 | -8.615850e-47 |
| Msa0010770 | Msa0850150 | 0.802973 | 4.349810e-49 | -8.615850e-47 |
| Msa0029630 | Msa0850150 | 0.804353 | 2.249717e-49 | -8.615850e-47 |
| Msa0033880 | Msa0850150 | 0.850217 | 1.958002e-60 | -8.615850e-47 |
| Msa0039250 | Msa0850150 | 0.825153 | 5.473913e-54 | -8.615850e-47 |
| Msa0041690 | Msa0850150 | 0.810059 | 1.391347e-50 | -8.615850e-47 |
| Msa0047250 | Msa0850150 | 0.806957 | 6.391628e-50 | -8.615850e-47 |
| Msa0048180 | Msa0850150 | 0.819835 | 9.425516e-53 | -8.615850e-47 |
| Msa0057710 | Msa0850150 | 0.817814 | 2.712536e-52 | -8.615850e-47 |
| Msa0073670 | Msa0850150 | 0.810133 | 1.341409e-50 | -8.615850e-47 |
| Msa0076040 | Msa0850150 | 0.830678 | 2.565620e-55 | -8.615850e-47 |
| Msa0077900 | Msa0850150 | 0.813799 | 2.131947e-51 | -8.615850e-47 |
| Msa0079920 | Msa0850150 | 0.805774 | 1.134723e-49 | -8.615850e-47 |
| Msa0081210 | Msa0850150 | 0.807222 | 5.616732e-50 | -8.615850e-47 |
| Msa0090660 | Msa0850150 | 0.815629 | 8.384280e-52 | -8.615850e-47 |
| Msa0098390 | Msa0850150 | -0.802464 | 5.540298e-49 | -8.615850e-47 |
| Msa0103180 | Msa0850150 | 0.825376 | 4.849906e-54 | -8.615850e-47 |
| Msa0115090 | Msa0850150 | 0.801075 | 1.068301e-48 | -8.615850e-47 |
| Msa0115370 | Msa0850150 | 0.810619 | 1.053371e-50 | -8.615850e-47 |
| Msa0610090 | Msa0850150 | 0.835940 | 1.252251e-56 | -8.615850e-47 |
| Msa0610390 | Msa0850150 | 0.804892 | 1.736661e-49 | -8.615850e-47 |
| Msa0614510 | Msa0850150 | 0.801343 | 9.417003e-49 | -8.615850e-47 |
| Msa0618950 | Msa0850150 | 0.819386 | 1.193808e-52 | -8.615850e-47 |
| Msa0628420 | Msa0850150 | 0.815811 | 7.634385e-52 | -8.615850e-47 |
| Msa0633570 | Msa0850150 | 0.813314 | 2.725804e-51 | -8.615850e-47 |
| Msa0644030 | Msa0850150 | 0.843024 | 1.806656e-58 | -8.615850e-47 |
| Msa0644800 | Msa0850150 | 0.806796 | 6.913441e-50 | -8.615850e-47 |
| Msa0658480 | Msa0850150 | 0.858841 | 6.244785e-63 | -8.615850e-47 |
| Msa0662630 | Msa0850150 | 0.836319 | 1.003373e-56 | -8.615850e-47 |
| Msa0666230 | Msa0850150 | 0.833843 | 4.225346e-56 | -8.615850e-47 |
| Msa0669180 | Msa0850150 | 0.802141 | 6.457113e-49 | -8.615850e-47 |
| Msa0687230 | Msa0850150 | 0.800449 | 1.433487e-48 | -8.615850e-47 |
| Msa0692840 | Msa0850150 | 0.801870 | 7.341889e-49 | -8.615850e-47 |
| Msa0695130 | Msa0850150 | 0.802656 | 5.057904e-49 | -8.615850e-47 |
| Msa0697720 | Msa0850150 | 0.820647 | 6.140810e-53 | -8.615850e-47 |
| Msa0705390 | Msa0850150 | 0.818160 | 2.265760e-52 | -8.615850e-47 |
| Msa0716410 | Msa0850150 | 0.806690 | 7.277817e-50 | -8.615850e-47 |
| Msa0734960 | Msa0850150 | 0.859198 | 4.880838e-63 | -8.615850e-47 |
| Msa0749400 | Msa0850150 | 0.802133 | 6.482036e-49 | -8.615850e-47 |
| Msa0752510 | Msa0850150 | 0.826178 | 3.127576e-54 | -8.615850e-47 |
| Msa0752700 | Msa0850150 | 0.800092 | 1.695243e-48 | -8.615850e-47 |
| Msa0756930 | Msa0850150 | 0.816701 | 4.829161e-52 | -8.615850e-47 |
| Msa0785130 | Msa0850150 | 0.800438 | 1.441328e-48 | -8.615850e-47 |
| Msa0788120 | Msa0850150 | 0.805800 | 1.120415e-49 | -8.615850e-47 |
| Msa0809980 | Msa0850150 | 0.868228 | 7.628987e-66 | -8.615850e-47 |
| Msa0824640 | Msa0850150 | 0.805146 | 1.536863e-49 | -8.615850e-47 |
| Msa0825270 | Msa0850150 | 0.802915 | 4.473206e-49 | -8.615850e-47 |
| Msa0826500 | Msa0850150 | 0.810645 | 1.040104e-50 | -8.615850e-47 |
| Msa0830880 | Msa0850150 | 0.819968 | 8.790672e-53 | -8.615850e-47 |
| Msa0831100 | Msa0850150 | 0.805734 | 1.157060e-49 | -8.615850e-47 |
| Msa0836500 | Msa0850150 | 0.841240 | 5.356170e-58 | -8.615850e-47 |
| Msa0125450 | Msa0850150 | 0.802136 | 6.472938e-49 | -8.615850e-47 |
| Msa0125540 | Msa0850150 | 0.805172 | 1.517269e-49 | -8.615850e-47 |
| Msa0127040 | Msa0850150 | 0.825747 | 3.960281e-54 | -8.615850e-47 |
| Msa0127850 | Msa0850150 | 0.855537 | 5.903944e-62 | -8.615850e-47 |
| Msa0130240 | Msa0850150 | 0.848003 | 8.082351e-60 | -8.615850e-47 |
| Msa0133720 | Msa0850150 | 0.818485 | 1.912646e-52 | -8.615850e-47 |
| Msa0133820 | Msa0850150 | 0.812496 | 4.118236e-51 | -8.615850e-47 |
| Msa0138360 | Msa0850150 | 0.811915 | 5.513261e-51 | -8.615850e-47 |
| Msa0140300 | Msa0850150 | 0.800999 | 1.107516e-48 | -8.615850e-47 |
| Msa0144360 | Msa0850150 | 0.800616 | 1.325630e-48 | -8.615850e-47 |
| Msa0146080 | Msa0850150 | 0.814764 | 1.304805e-51 | -8.615850e-47 |
| Msa0147980 | Msa0850150 | 0.820948 | 5.236032e-53 | -8.615850e-47 |
| Msa0167480 | Msa0850150 | 0.807269 | 5.488021e-50 | -8.615850e-47 |
| Msa0174000 | Msa0850150 | 0.852645 | 4.030840e-61 | -8.615850e-47 |
| Msa0181610 | Msa0850150 | 0.816146 | 6.426761e-52 | -8.615850e-47 |
| Msa0188350 | Msa0850150 | 0.812177 | 4.834162e-51 | -8.615850e-47 |
| Msa0193600 | Msa0850150 | 0.811169 | 8.006178e-51 | -8.615850e-47 |
| Msa0231100 | Msa0850150 | 0.802479 | 5.501371e-49 | -8.615850e-47 |
| Msa0370160 | Msa0850150 | -0.800740 | 1.250984e-48 | -8.615850e-47 |
| Msa0378970 | Msa0850150 | 0.809723 | 1.643342e-50 | -8.615850e-47 |
| Msa0384670 | Msa0850150 | 0.806585 | 7.660064e-50 | -8.615850e-47 |
| Msa0394690 | Msa0850150 | 0.800531 | 1.379353e-48 | -8.615850e-47 |
| Msa0405650 | Msa0850150 | 0.810388 | 1.181683e-50 | -8.615850e-47 |
| Msa0431770 | Msa0850150 | 0.803146 | 4.007575e-49 | -8.615850e-47 |
| Msa0434570 | Msa0850150 | 0.810827 | 9.497164e-51 | -8.615850e-47 |
| Msa0434770 | Msa0850150 | 0.809368 | 1.959001e-50 | -8.615850e-47 |
| Msa0436200 | Msa0850150 | 0.811025 | 8.603011e-51 | -8.615850e-47 |
| Msa0439230 | Msa0850150 | 0.821343 | 4.245733e-53 | -8.615850e-47 |
| Msa0456880 | Msa0850150 | 0.814936 | 1.194832e-51 | -8.615850e-47 |
| Msa0461590 | Msa0850150 | 0.804837 | 1.782902e-49 | -8.615850e-47 |
| Msa0478580 | Msa0850150 | 0.819853 | 9.338111e-53 | -8.615850e-47 |
| Msa0239450 | Msa0850150 | 0.820879 | 5.432719e-53 | -8.615850e-47 |
| Msa0241830 | Msa0850150 | 0.818543 | 1.856079e-52 | -8.615850e-47 |
| Msa0245430 | Msa0850150 | 0.802961 | 4.375293e-49 | -8.615850e-47 |
| Msa0249580 | Msa0850150 | 0.808476 | 3.040011e-50 | -8.615850e-47 |
| Msa0262480 | Msa0850150 | 0.831396 | 1.709119e-55 | -8.615850e-47 |
| Msa0273650 | Msa0850150 | 0.811454 | 6.946021e-51 | -8.615850e-47 |
| Msa0275360 | Msa0850150 | 0.811989 | 5.313555e-51 | -8.615850e-47 |
| Msa0295590 | Msa0850150 | 0.802256 | 6.116786e-49 | -8.615850e-47 |
| Msa0296250 | Msa0850150 | 0.808421 | 3.123534e-50 | -8.615850e-47 |
| Msa0300350 | Msa0850150 | 0.807557 | 4.769215e-50 | -8.615850e-47 |
| Msa0320590 | Msa0850150 | 0.800178 | 1.627899e-48 | -8.615850e-47 |
| Msa0322590 | Msa0850150 | 0.802024 | 6.826778e-49 | -8.615850e-47 |
| Msa0322900 | Msa0850150 | 0.817400 | 3.363725e-52 | -8.615850e-47 |
| Msa0343190 | Msa0850150 | 0.829194 | 5.899522e-55 | -8.615850e-47 |
| Msa0363060 | Msa0850150 | 0.807496 | 4.912858e-50 | -8.615850e-47 |
| Msa0484290 | Msa0850150 | 0.839621 | 1.420326e-57 | -8.615850e-47 |
| Msa0484740 | Msa0850150 | 0.800746 | 1.247193e-48 | -8.615850e-47 |
| Msa0511770 | Msa0850150 | 0.816536 | 5.258308e-52 | -8.615850e-47 |
| Msa0513260 | Msa0850150 | 0.806931 | 6.470952e-50 | -8.615850e-47 |
| Msa0518960 | Msa0850150 | 0.809808 | 1.575646e-50 | -8.615850e-47 |
| Msa0524500 | Msa0850150 | 0.801059 | 1.076311e-48 | -8.615850e-47 |
| Msa0531250 | Msa0850150 | 0.822235 | 2.640114e-53 | -8.615850e-47 |
| Msa0547020 | Msa0850150 | 0.830780 | 2.421889e-55 | -8.615850e-47 |
| Msa0547990 | Msa0850150 | 0.864404 | 1.245985e-64 | -8.615850e-47 |
| Msa0549790 | Msa0850150 | 0.801955 | 7.051632e-49 | -8.615850e-47 |
| Msa0560500 | Msa0850150 | 0.828863 | 7.097696e-55 | -8.615850e-47 |
| Msa0581070 | Msa0850150 | 0.809123 | 2.210391e-50 | -8.615850e-47 |
| Msa0581110 | Msa0850150 | 0.801439 | 8.999063e-49 | -8.615850e-47 |
| Msa0583500 | Msa0850150 | 0.822298 | 2.552293e-53 | -8.615850e-47 |
| Msa0588090 | Msa0850150 | 0.804887 | 1.740944e-49 | -8.615850e-47 |
| Msa0593700 | Msa0850150 | 0.826492 | 2.633887e-54 | -8.615850e-47 |
| Msa0600610 | Msa0850150 | 0.805455 | 1.323941e-49 | -8.615850e-47 |
| Msa0850150 | Msa0864010 | 0.806725 | 7.153678e-50 | -8.615850e-47 |
| Msa0850150 | Msa0869010 | 0.824144 | 9.463391e-54 | -8.615850e-47 |
| Msa0850150 | Msa0879850 | 0.817887 | 2.612039e-52 | -8.615850e-47 |
| Msa0850150 | Msa0888940 | 0.850425 | 1.712543e-60 | -8.615850e-47 |
| Msa0850150 | Msa0898760 | 0.831398 | 1.707243e-55 | -8.615850e-47 |
| Msa0850150 | Msa0899350 | 0.805692 | 1.180617e-49 | -8.615850e-47 |
| Msa0850150 | Msa0928120 | 0.816471 | 5.437484e-52 | -8.615850e-47 |
| Msa0850150 | Msa0943170 | 0.834006 | 3.847034e-56 | -8.615850e-47 |
| Msa0850150 | Msa0944660 | 0.834803 | 2.425745e-56 | -8.615850e-47 |
| Msa0850150 | Msa0959910 | 0.803123 | 4.051475e-49 | -8.615850e-47 |
| Msa0850150 | Msa0960830 | 0.815117 | 1.089699e-51 | -8.615850e-47 |
| Msa0850150 | Msa0980940 | 0.842804 | 2.067692e-58 | -8.615850e-47 |
| Msa0850150 | Msa1004420 | 0.806283 | 8.868162e-50 | -8.615850e-47 |
| Msa0850150 | Msa1009750 | 0.803454 | 3.458916e-49 | -8.615850e-47 |
| Msa0850150 | Msa1010070 | 0.819543 | 1.098982e-52 | -8.615850e-47 |
| Msa0850150 | Msa1029070 | 0.813508 | 2.470356e-51 | -8.615850e-47 |
| Msa0850150 | Msa1050910 | 0.809431 | 1.898672e-50 | -8.615850e-47 |
| Msa0850150 | Msa1051600 | 0.803039 | 4.216789e-49 | -8.615850e-47 |
| Msa0850150 | Msa1055010 | 0.839915 | 1.190490e-57 | -8.615850e-47 |
| Msa0850150 | Msa1072600 | 0.826527 | 2.583930e-54 | -8.615850e-47 |
| Msa0850150 | Msa1078000 | 0.806508 | 7.951362e-50 | -8.615850e-47 |
| Msa0850150 | Msa1083880 | 0.808965 | 2.389790e-50 | -8.615850e-47 |
| Msa0850150 | Msa1093840 | 0.834349 | 3.156051e-56 | -8.615850e-47 |
| Msa0850150 | Msa1097820 | 0.809057 | 2.283413e-50 | -8.615850e-47 |
| Msa0850150 | Msa1113590 | 0.804600 | 1.998235e-49 | -8.615850e-47 |
| Msa0850150 | Msa1123350 | 0.831665 | 1.467513e-55 | -8.615850e-47 |
| Msa0850150 | Msa1127270 | 0.809465 | 1.867409e-50 | -8.615850e-47 |
| Msa0850150 | Msa1127540 | 0.856862 | 2.413738e-62 | -8.615850e-47 |
| Msa0850150 | Msa1127590 | 0.839584 | 1.451987e-57 | -8.615850e-47 |
| Msa0850150 | Msa1154490 | 0.811914 | 5.516835e-51 | -8.615850e-47 |
| Msa0850150 | Msa1156160 | 0.807587 | 4.700441e-50 | -8.615850e-47 |
| Msa0850150 | Msa1158230 | 0.805750 | 1.148058e-49 | -8.615850e-47 |
| Msa0850150 | Msa1165490 | 0.813737 | 2.199780e-51 | -8.615850e-47 |
| Msa0850150 | Msa1169720 | 0.810453 | 1.144056e-50 | -8.615850e-47 |
| Msa0850150 | Msa1174850 | 0.815512 | 8.900427e-52 | -8.615850e-47 |
| Msa0850150 | Msa1181170 | -0.811016 | 8.644699e-51 | -8.615850e-47 |
| Msa0850150 | Msa1184370 | 0.811446 | 6.974366e-51 | -8.615850e-47 |
| Msa0850150 | Msa1192850 | 0.851910 | 6.523627e-61 | -8.615850e-47 |
| Msa0850150 | Msa1199710 | 0.807864 | 4.103145e-50 | -8.615850e-47 |
| Msa0850150 | Msa1201810 | 0.815703 | 8.070137e-52 | -8.615850e-47 |
| Msa0850150 | Msa1201830 | 0.870097 | 1.886642e-66 | -8.615850e-47 |
| Msa0850150 | Msa1202580 | 0.832972 | 6.966644e-56 | -8.615850e-47 |
| Msa0850150 | Msa1204830 | 0.815159 | 1.066198e-51 | -8.615850e-47 |
| Msa0850150 | Msa1204850 | 0.811690 | 6.170811e-51 | -8.615850e-47 |
| Msa0850150 | Msa1206650 | 0.812276 | 4.599043e-51 | -8.615850e-47 |
| Msa0850150 | Msa1213810 | 0.810914 | 9.093190e-51 | -8.615850e-47 |
| Msa0850150 | Msa1214320 | 0.837691 | 4.477866e-57 | -8.615850e-47 |
| Msa0850150 | Msa1218590 | 0.809423 | 1.906582e-50 | -8.615850e-47 |
| Msa0850150 | Msa1221060 | 0.810071 | 1.382811e-50 | -8.615850e-47 |
| Msa0850150 | Msa1227690 | 0.837161 | 6.118110e-57 | -8.615850e-47 |
| Msa0850150 | Msa1235250 | 0.815109 | 1.094027e-51 | -8.615850e-47 |
| Msa0850150 | Msa1251160 | 0.828159 | 1.049942e-54 | -8.615850e-47 |
| Msa0850150 | Msa1254620 | 0.804874 | 1.751801e-49 | -8.615850e-47 |
| Msa0850150 | Msa1261070 | 0.831246 | 1.860525e-55 | -8.615850e-47 |
| Msa0850150 | Msa1265590 | 0.800504 | 1.397028e-48 | -8.615850e-47 |
| Msa0850150 | Msa1294840 | 0.843243 | 1.579987e-58 | -8.615850e-47 |
| Msa0850150 | Msa1295110 | 0.801809 | 7.556863e-49 | -8.615850e-47 |
| Msa0850150 | Msa1303240 | 0.808148 | 3.570866e-50 | -8.615850e-47 |
| Msa0850150 | Msa1303250 | 0.816006 | 6.908288e-52 | -8.615850e-47 |
| Msa0850150 | Msa1305710 | 0.802642 | 5.092649e-49 | -8.615850e-47 |
| Msa0850150 | Msa1306390 | 0.809520 | 1.817170e-50 | -8.615850e-47 |
| Msa0850150 | Msa1327490 | 0.855869 | 4.722534e-62 | -8.615850e-47 |
| Msa0850150 | Msa1329450 | 0.813061 | 3.096681e-51 | -8.615850e-47 |
| Msa0850150 | Msa1331250 | 0.803867 | 2.839913e-49 | -8.615850e-47 |
| Msa0850150 | Msa1344850 | 0.803517 | 3.357315e-49 | -8.615850e-47 |
| Msa0850150 | Msa1356610 | 0.856224 | 3.717042e-62 | -8.615850e-47 |
| Msa0850150 | Msa1361400 | 0.824840 | 6.491320e-54 | -8.615850e-47 |
| Msa0850150 | Msa1361410 | 0.810118 | 1.351388e-50 | -8.615850e-47 |
| Msa0850150 | Msa1362420 | 0.802382 | 5.760194e-49 | -8.615850e-47 |
| Msa0850150 | Msa1373820 | 0.800480 | 1.413213e-48 | -8.615850e-47 |
| Msa0850150 | Msa1376650 | 0.824596 | 7.410267e-54 | -8.615850e-47 |
| Msa0850150 | Msa1377800 | 0.803592 | 3.239372e-49 | -8.615850e-47 |
| Msa0850150 | Msa1387190 | 0.814712 | 1.339930e-51 | -8.615850e-47 |
| Msa0850150 | Msa1397940 | 0.835225 | 1.899845e-56 | -8.615850e-47 |
| Msa0850150 | Msa1411950 | 0.832048 | 1.180825e-55 | -8.615850e-47 |
| Msa0850150 | Msa1412660 | 0.821514 | 3.877696e-53 | -8.615850e-47 |
| Msa0850150 | Msa1421560 | 0.806799 | 6.901398e-50 | -8.615850e-47 |
| Msa0850150 | Msa1424780 | 0.807368 | 5.230558e-50 | -8.615850e-47 |
| Msa0850150 | Msa1438450 | 0.801799 | 7.592975e-49 | -8.615850e-47 |
| Msa0850150 | Msa1438640 | 0.804653 | 1.948709e-49 | -8.615850e-47 |
| Msa0850150 | Msa1439610 | 0.802235 | 6.177020e-49 | -8.615850e-47 |
| Msa0850150 | Msa1443930 | 0.806742 | 7.094938e-50 | -8.615850e-47 |
| Msa0850150 | Msa1450720 | 0.827842 | 1.251285e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0850150 | MtrunA17_Chr4g0072411 | 100.000 | 103 | 0 | 0 | 1 | 103 | 59 | 161 | 5.39e-69 | 203 |
| Msa0850150 | MtrunA17_Chr5g0425951 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.26e-68 | 199 |
| Msa0850150 | MtrunA17_Chr4g0030431 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.26e-68 | 199 |
| Msa0850150 | MtrunA17_Chr3g0100121 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.26e-68 | 199 |
| Msa0850150 | MtrunA17_Chr3g0113681 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.26e-68 | 199 |
| Msa0850150 | MtrunA17_Chr2g0327641 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.26e-68 | 199 |
| Msa0850150 | MtrunA17_Chr3g0103351 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.26e-68 | 199 |
| Msa0850150 | MtrunA17_Chr8g0352791 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.26e-68 | 199 |
| Msa0850150 | MtrunA17_Chr3g0103821 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.26e-68 | 199 |
| Msa0850150 | MtrunA17_Chr3g0104031 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.26e-68 | 199 |
| Msa0850150 | MtrunA17_Chr7g0225731 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.26e-68 | 199 |
| Msa0850150 | MtrunA17_Chr3g0103801 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.26e-68 | 199 |
| Msa0850150 | MtrunA17_Chr3g0103881 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.26e-68 | 199 |
| Msa0850150 | MtrunA17_Chr7g0262791 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.26e-68 | 199 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0850150 | AT3G53730.1 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 3.11e-68 | 199 |
| Msa0850150 | AT1G07820.2 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 3.11e-68 | 199 |
| Msa0850150 | AT1G07820.1 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 3.11e-68 | 199 |
| Msa0850150 | AT5G59690.1 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 3.11e-68 | 199 |
| Msa0850150 | AT3G46320.1 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 3.11e-68 | 199 |
| Msa0850150 | AT2G28740.1 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 3.11e-68 | 199 |
| Msa0850150 | AT1G07660.1 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 3.11e-68 | 199 |
| Msa0850150 | AT3G45930.1 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 3.11e-68 | 199 |
| Msa0850150 | AT5G59970.1 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 3.11e-68 | 199 |
| Msa0850150 | AT5G59970.2 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 3.11e-68 | 199 |
| Msa0850150 | AT1G07660.2 | 83.495 | 103 | 0 | 1 | 1 | 103 | 1 | 86 | 4.52e-51 | 155 |
Find 26 sgRNAs with CRISPR-Local
Find 28 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAGGACCCTTTATGGTTT+TGG | 0.243182 | 5_4:+38755960 | Msa0850150:CDS |
| AGACAAGGAAGGACCCTTTA+TGG | 0.291085 | 5_4:+38755954 | Msa0850150:CDS |
| AGGAAAAGGAGGAAAGGGTC+TGG | 0.345687 | 5_4:+38755689 | Msa0850150:CDS |
| GGAAAAGGAGGAAAGGGTCT+GGG | 0.428161 | 5_4:+38755690 | Msa0850150:CDS |
| GTTCTTCGAGATAACATTCA+AGG | 0.428481 | 5_4:+38755741 | Msa0850150:CDS |
| AAGACGACGAATCGCAGGTT+TGG | 0.443598 | 5_4:-38755769 | None:intergenic |
| GGAGGAAAGGGTCTGGGAAA+GGG | 0.463171 | 5_4:+38755696 | Msa0850150:CDS |
| AGGAGGAAAGGGTCTGGGAA+AGG | 0.465557 | 5_4:+38755695 | Msa0850150:CDS |
| GGAAAGGGTCTGGGAAAGGG+TGG | 0.472991 | 5_4:+38755699 | Msa0850150:CDS |
| ATCTTGCAATCAACAATGTC+AGG | 0.473641 | 5_4:+38755663 | None:intergenic |
| TCGCAAGACGGTTACTGCTA+TGG | 0.479581 | 5_4:+38755911 | Msa0850150:CDS |
| ACAATGTCAGGAAGAGGAAA+AGG | 0.493795 | 5_4:+38755675 | None:intergenic |
| GGAAGAGGAAAAGGAGGAAA+GGG | 0.523720 | 5_4:+38755684 | Msa0850150:CDS |
| CTGCGATTCGTCGTCTTGCA+AGG | 0.537712 | 5_4:+38755775 | Msa0850150:CDS |
| CAATCAACAATGTCAGGAAG+AGG | 0.542220 | 5_4:+38755669 | None:intergenic |
| AGGAAGAGGAAAAGGAGGAA+AGG | 0.557567 | 5_4:+38755683 | Msa0850150:CDS |
| CTTGCAAGACGACGAATCGC+AGG | 0.572639 | 5_4:-38755774 | None:intergenic |
| CGTCGTCTTGCAAGGCGTGG+TGG | 0.615268 | 5_4:+38755783 | Msa0850150:CDS |
| ATTCGTCGTCTTGCAAGGCG+TGG | 0.619919 | 5_4:+38755780 | Msa0850150:CDS |
| ATGTCAGGAAGAGGAAAAGG+AGG | 0.630961 | 5_4:+38755678 | Msa0850150:CDS |
| GTTTATGCACTCAAGAGACA+AGG | 0.649593 | 5_4:+38755939 | Msa0850150:CDS |
| TCGTGATGCTGTAACCTACA+CGG | 0.656428 | 5_4:+38755878 | Msa0850150:CDS |
| GGTGGTGTGAAGCGTATCAG+TGG | 0.661880 | 5_4:+38755801 | Msa0850150:CDS |
| GGAACACGCTCGTCGCAAGA+CGG | 0.672406 | 5_4:+38755899 | Msa0850150:CDS |
| ATGCACTCAAGAGACAAGGA+AGG | 0.704360 | 5_4:+38755943 | Msa0850150:CDS |
| CTGATCTATGAAGAGACTCG+TGG | 0.706611 | 5_4:+38755825 | Msa0850150:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| GTTCTTCGAGATAACATTCA+AGG | + | chr5_4:38755741-38755760 | Msa0850150:CDS | 35.0% | |
| GTTTATGCACTCAAGAGACA+AGG | + | chr5_4:38755939-38755958 | Msa0850150:CDS | 40.0% | |
| ! | GAAGGACCCTTTATGGTTTT+GGG | + | chr5_4:38755961-38755980 | Msa0850150:CDS | 40.0% |
| !! | AAGGACCCTTTATGGTTTTG+GGG | + | chr5_4:38755962-38755981 | Msa0850150:CDS | 40.0% |
| CTAACCCCCAAAACCATAAA+GGG | - | chr5_4:38755970-38755989 | None:intergenic | 40.0% | |
| ATGTCAGGAAGAGGAAAAGG+AGG | + | chr5_4:38755678-38755697 | Msa0850150:CDS | 45.0% | |
| AGGAAGAGGAAAAGGAGGAA+AGG | + | chr5_4:38755683-38755702 | Msa0850150:CDS | 45.0% | |
| GGAAGAGGAAAAGGAGGAAA+GGG | + | chr5_4:38755684-38755703 | Msa0850150:CDS | 45.0% | |
| CTGATCTATGAAGAGACTCG+TGG | + | chr5_4:38755825-38755844 | Msa0850150:CDS | 45.0% | |
| TCGTGATGCTGTAACCTACA+CGG | + | chr5_4:38755878-38755897 | Msa0850150:CDS | 45.0% | |
| ATGCACTCAAGAGACAAGGA+AGG | + | chr5_4:38755943-38755962 | Msa0850150:CDS | 45.0% | |
| AGACAAGGAAGGACCCTTTA+TGG | + | chr5_4:38755954-38755973 | Msa0850150:CDS | 45.0% | |
| ! | GGAAGGACCCTTTATGGTTT+TGG | + | chr5_4:38755960-38755979 | Msa0850150:CDS | 45.0% |
| !!! | AGGACCCTTTATGGTTTTGG+GGG | + | chr5_4:38755963-38755982 | Msa0850150:CDS | 45.0% |
| AGGAAAAGGAGGAAAGGGTC+TGG | + | chr5_4:38755689-38755708 | Msa0850150:CDS | 50.0% | |
| GGAAAAGGAGGAAAGGGTCT+GGG | + | chr5_4:38755690-38755709 | Msa0850150:CDS | 50.0% | |
| AAGACGACGAATCGCAGGTT+TGG | - | chr5_4:38755772-38755791 | None:intergenic | 50.0% | |
| TCGCAAGACGGTTACTGCTA+TGG | + | chr5_4:38755911-38755930 | Msa0850150:CDS | 50.0% | |
| AGGAGGAAAGGGTCTGGGAA+AGG | + | chr5_4:38755695-38755714 | Msa0850150:CDS | 55.0% | |
| GGAGGAAAGGGTCTGGGAAA+GGG | + | chr5_4:38755696-38755715 | Msa0850150:CDS | 55.0% | |
| CTTGCAAGACGACGAATCGC+AGG | - | chr5_4:38755777-38755796 | None:intergenic | 55.0% | |
| CTGCGATTCGTCGTCTTGCA+AGG | + | chr5_4:38755775-38755794 | Msa0850150:CDS | 55.0% | |
| ATTCGTCGTCTTGCAAGGCG+TGG | + | chr5_4:38755780-38755799 | Msa0850150:CDS | 55.0% | |
| GGTGGTGTGAAGCGTATCAG+TGG | + | chr5_4:38755801-38755820 | Msa0850150:CDS | 55.0% | |
| GGAAAGGGTCTGGGAAAGGG+TGG | + | chr5_4:38755699-38755718 | Msa0850150:CDS | 60.0% | |
| GGAACACGCTCGTCGCAAGA+CGG | + | chr5_4:38755899-38755918 | Msa0850150:CDS | 60.0% | |
| CGTCGTCTTGCAAGGCGTGG+TGG | + | chr5_4:38755783-38755802 | Msa0850150:CDS | 65.0% | |
| GCGACGAGCGTGTTCCGTGT+AGG | - | chr5_4:38755895-38755914 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 38755678 | 38755989 | 38755678 | ID=Msa0850150;Name=Msa0850150 |
| chr5_4 | mRNA | 38755678 | 38755989 | 38755678 | ID=Msa0850150-mRNA-1;Parent=Msa0850150;Name=Msa0850150-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|-1|0|1|-1|1|1|0|103 |
| chr5_4 | exon | 38755678 | 38755989 | 38755678 | ID=Msa0850150-mRNA-1:exon:12412;Parent=Msa0850150-mRNA-1 |
| chr5_4 | CDS | 38755678 | 38755989 | 38755678 | ID=Msa0850150-mRNA-1:cds;Parent=Msa0850150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
