Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0197780 | ACJ85686.1 | 92.082 | 341 | 22 | 1 | 1 | 336 | 1 | 341 | 0.0 | 567 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0197780 | sp|Q3MHI8|TM10A_BOVIN | 39.662 | 237 | 122 | 5 | 111 | 328 | 103 | 337 | 7.00e-48 | 167 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0197780 | B7FLQ3 | 92.082 | 341 | 22 | 1 | 1 | 336 | 1 | 341 | 0.0 | 567 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003720 | Msa0197780 | 0.805498 | 1.296561e-49 | -8.615850e-47 |
Msa0012940 | Msa0197780 | 0.818745 | 1.669590e-52 | -8.615850e-47 |
Msa0016670 | Msa0197780 | 0.808322 | 3.279289e-50 | -8.615850e-47 |
Msa0018620 | Msa0197780 | 0.809630 | 1.720871e-50 | -8.615850e-47 |
Msa0022550 | Msa0197780 | 0.814975 | 1.171305e-51 | -8.615850e-47 |
Msa0026910 | Msa0197780 | 0.815218 | 1.034641e-51 | -8.615850e-47 |
Msa0027260 | Msa0197780 | 0.806252 | 9.001124e-50 | -8.615850e-47 |
Msa0027320 | Msa0197780 | 0.805855 | 1.091015e-49 | -8.615850e-47 |
Msa0032260 | Msa0197780 | 0.806522 | 7.897580e-50 | -8.615850e-47 |
Msa0032920 | Msa0197780 | -0.803526 | 3.342840e-49 | -8.615850e-47 |
Msa0035130 | Msa0197780 | 0.811703 | 6.131719e-51 | -8.615850e-47 |
Msa0036130 | Msa0197780 | 0.809220 | 2.107388e-50 | -8.615850e-47 |
Msa0045490 | Msa0197780 | 0.801014 | 1.099344e-48 | -8.615850e-47 |
Msa0047160 | Msa0197780 | 0.813542 | 2.428765e-51 | -8.615850e-47 |
Msa0048180 | Msa0197780 | 0.816742 | 4.727709e-52 | -8.615850e-47 |
Msa0057710 | Msa0197780 | 0.828648 | 7.997595e-55 | -8.615850e-47 |
Msa0061340 | Msa0197780 | 0.809327 | 1.998751e-50 | -8.615850e-47 |
Msa0069330 | Msa0197780 | 0.802017 | 6.850237e-49 | -8.615850e-47 |
Msa0073670 | Msa0197780 | 0.807438 | 5.055403e-50 | -8.615850e-47 |
Msa0074750 | Msa0197780 | 0.800525 | 1.383381e-48 | -8.615850e-47 |
Msa0075170 | Msa0197780 | 0.800771 | 1.232358e-48 | -8.615850e-47 |
Msa0077540 | Msa0197780 | 0.819471 | 1.141349e-52 | -8.615850e-47 |
Msa0094470 | Msa0197780 | 0.817379 | 3.400484e-52 | -8.615850e-47 |
Msa0103180 | Msa0197780 | 0.815514 | 8.891094e-52 | -8.615850e-47 |
Msa0106620 | Msa0197780 | 0.804340 | 2.263706e-49 | -8.615850e-47 |
Msa0118000 | Msa0197780 | 0.807253 | 5.533308e-50 | -8.615850e-47 |
Msa0127310 | Msa0197780 | 0.802076 | 6.658573e-49 | -8.615850e-47 |
Msa0128860 | Msa0197780 | 0.808739 | 2.670508e-50 | -8.615850e-47 |
Msa0130240 | Msa0197780 | 0.811089 | 8.335599e-51 | -8.615850e-47 |
Msa0140300 | Msa0197780 | 0.834928 | 2.256313e-56 | -8.615850e-47 |
Msa0142950 | Msa0197780 | 0.810614 | 1.055979e-50 | -8.615850e-47 |
Msa0144360 | Msa0197780 | 0.801428 | 9.047783e-49 | -8.615850e-47 |
Msa0146280 | Msa0197780 | 0.816534 | 5.261904e-52 | -8.615850e-47 |
Msa0152400 | Msa0197780 | 0.806774 | 6.987922e-50 | -8.615850e-47 |
Msa0156230 | Msa0197780 | 0.825188 | 5.370778e-54 | -8.615850e-47 |
Msa0170570 | Msa0197780 | 0.805434 | 1.337753e-49 | -8.615850e-47 |
Msa0174730 | Msa0197780 | 0.809713 | 1.651233e-50 | -8.615850e-47 |
Msa0182620 | Msa0197780 | -0.807942 | 3.950387e-50 | -8.615850e-47 |
Msa0183900 | Msa0197780 | 0.802478 | 5.504682e-49 | -8.615850e-47 |
Msa0186890 | Msa0197780 | 0.826749 | 2.286638e-54 | -8.615850e-47 |
Msa0187930 | Msa0197780 | 0.803276 | 3.765609e-49 | -8.615850e-47 |
Msa0188350 | Msa0197780 | 0.811399 | 7.139685e-51 | -8.615850e-47 |
Msa0194540 | Msa0197780 | 0.812294 | 4.558314e-51 | -8.615850e-47 |
Msa0197420 | Msa0197780 | 0.802324 | 5.922805e-49 | -8.615850e-47 |
Msa0197520 | Msa0197780 | 0.813356 | 2.668294e-51 | -8.615850e-47 |
Msa0197780 | Msa0205850 | 0.821518 | 3.869121e-53 | -8.615850e-47 |
Msa0197780 | Msa0206840 | 0.821147 | 4.713147e-53 | -8.615850e-47 |
Msa0197780 | Msa0227400 | 0.810914 | 9.092384e-51 | -8.615850e-47 |
Msa0197780 | Msa0231880 | 0.825798 | 3.850816e-54 | -8.615850e-47 |
Msa0197780 | Msa0239450 | 0.824881 | 6.348757e-54 | -8.615850e-47 |
Msa0197780 | Msa0241190 | 0.811977 | 5.345063e-51 | -8.615850e-47 |
Msa0197780 | Msa0249580 | 0.814956 | 1.182862e-51 | -8.615850e-47 |
Msa0197780 | Msa0254790 | 0.806370 | 8.501405e-50 | -8.615850e-47 |
Msa0197780 | Msa0262480 | 0.803937 | 2.746264e-49 | -8.615850e-47 |
Msa0197780 | Msa0263080 | 0.802486 | 5.483448e-49 | -8.615850e-47 |
Msa0197780 | Msa0264150 | 0.803773 | 2.971133e-49 | -8.615850e-47 |
Msa0197780 | Msa0268130 | 0.804420 | 2.179119e-49 | -8.615850e-47 |
Msa0197780 | Msa0287310 | 0.813561 | 2.404682e-51 | -8.615850e-47 |
Msa0197780 | Msa0292400 | 0.803541 | 3.319294e-49 | -8.615850e-47 |
Msa0197780 | Msa0298990 | 0.800910 | 1.154450e-48 | -8.615850e-47 |
Msa0197780 | Msa0300690 | 0.828563 | 8.384148e-55 | -8.615850e-47 |
Msa0197780 | Msa0307850 | 0.832282 | 1.033118e-55 | -8.615850e-47 |
Msa0197780 | Msa0316810 | 0.802955 | 4.388938e-49 | -8.615850e-47 |
Msa0197780 | Msa0322900 | 0.806262 | 8.959948e-50 | -8.615850e-47 |
Msa0197780 | Msa0325850 | 0.809474 | 1.858882e-50 | -8.615850e-47 |
Msa0197780 | Msa0334040 | 0.815095 | 1.101836e-51 | -8.615850e-47 |
Msa0197780 | Msa0358670 | 0.801824 | 7.504202e-49 | -8.615850e-47 |
Msa0197780 | Msa0366240 | 0.804122 | 2.513590e-49 | -8.615850e-47 |
Msa0197780 | Msa0376040 | 0.800872 | 1.175520e-48 | -8.615850e-47 |
Msa0197780 | Msa0376280 | 0.807764 | 4.309496e-50 | -8.615850e-47 |
Msa0197780 | Msa0378970 | 0.802561 | 5.290935e-49 | -8.615850e-47 |
Msa0197780 | Msa0388990 | 0.809081 | 2.256357e-50 | -8.615850e-47 |
Msa0197780 | Msa0395790 | 0.805927 | 1.053884e-49 | -8.615850e-47 |
Msa0197780 | Msa0423900 | 0.802885 | 4.536203e-49 | -8.615850e-47 |
Msa0197780 | Msa0438200 | 0.811397 | 7.147473e-51 | -8.615850e-47 |
Msa0197780 | Msa0475790 | 0.814981 | 1.167645e-51 | -8.615850e-47 |
Msa0197780 | Msa0484290 | 0.820257 | 7.546841e-53 | -8.615850e-47 |
Msa0197780 | Msa0484840 | 0.802373 | 5.785812e-49 | -8.615850e-47 |
Msa0197780 | Msa0510290 | 0.807062 | 6.073607e-50 | -8.615850e-47 |
Msa0197780 | Msa0516120 | 0.810204 | 1.294797e-50 | -8.615850e-47 |
Msa0197780 | Msa0518030 | 0.802116 | 6.535589e-49 | -8.615850e-47 |
Msa0197780 | Msa0524500 | 0.805409 | 1.353969e-49 | -8.615850e-47 |
Msa0197780 | Msa0525340 | 0.804292 | 2.317007e-49 | -8.615850e-47 |
Msa0197780 | Msa0526540 | 0.811401 | 7.131604e-51 | -8.615850e-47 |
Msa0197780 | Msa0531250 | 0.814028 | 1.898159e-51 | -8.615850e-47 |
Msa0197780 | Msa0541860 | 0.828041 | 1.120725e-54 | -8.615850e-47 |
Msa0197780 | Msa0552810 | 0.807397 | 5.156646e-50 | -8.615850e-47 |
Msa0197780 | Msa0557070 | 0.805074 | 1.591050e-49 | -8.615850e-47 |
Msa0197780 | Msa0576680 | 0.803272 | 3.772742e-49 | -8.615850e-47 |
Msa0197780 | Msa0581070 | 0.821572 | 3.758917e-53 | -8.615850e-47 |
Msa0197780 | Msa0588090 | 0.815267 | 1.009268e-51 | -8.615850e-47 |
Msa0197780 | Msa0615440 | 0.807735 | 4.372406e-50 | -8.615850e-47 |
Msa0197780 | Msa0618950 | 0.805163 | 1.523904e-49 | -8.615850e-47 |
Msa0197780 | Msa0620230 | 0.808861 | 2.515606e-50 | -8.615850e-47 |
Msa0197780 | Msa0628420 | 0.812203 | 4.772112e-51 | -8.615850e-47 |
Msa0197780 | Msa0652300 | 0.802508 | 5.427200e-49 | -8.615850e-47 |
Msa0197780 | Msa0666230 | 0.800122 | 1.671280e-48 | -8.615850e-47 |
Msa0197780 | Msa0677410 | 0.828687 | 7.827344e-55 | -8.615850e-47 |
Msa0197780 | Msa0680240 | 0.802707 | 4.937454e-49 | -8.615850e-47 |
Msa0197780 | Msa0684500 | 0.809413 | 1.915791e-50 | -8.615850e-47 |
Msa0197780 | Msa0698490 | 0.807270 | 5.487897e-50 | -8.615850e-47 |
Msa0197780 | Msa0698660 | 0.808214 | 3.456821e-50 | -8.615850e-47 |
Msa0197780 | Msa0703230 | 0.829149 | 6.050165e-55 | -8.615850e-47 |
Msa0197780 | Msa0704600 | 0.817288 | 3.564999e-52 | -8.615850e-47 |
Msa0197780 | Msa0710270 | 0.820469 | 6.747167e-53 | -8.615850e-47 |
Msa0197780 | Msa0734960 | 0.814114 | 1.816678e-51 | -8.615850e-47 |
Msa0197780 | Msa0750880 | 0.815827 | 7.570783e-52 | -8.615850e-47 |
Msa0197780 | Msa0752510 | 0.831417 | 1.689288e-55 | -8.615850e-47 |
Msa0197780 | Msa0766580 | 0.810187 | 1.305537e-50 | -8.615850e-47 |
Msa0197780 | Msa0790400 | 0.812615 | 3.878619e-51 | -8.615850e-47 |
Msa0197780 | Msa0809980 | 0.800053 | 1.726178e-48 | -8.615850e-47 |
Msa0197780 | Msa0818630 | 0.812552 | 4.003048e-51 | -8.615850e-47 |
Msa0197780 | Msa0828920 | 0.807016 | 6.209384e-50 | -8.615850e-47 |
Msa0197780 | Msa0830880 | 0.826371 | 2.814241e-54 | -8.615850e-47 |
Msa0197780 | Msa0850960 | 0.827873 | 1.229880e-54 | -8.615850e-47 |
Msa0197780 | Msa0861510 | 0.818963 | 1.489611e-52 | -8.615850e-47 |
Msa0197780 | Msa0861530 | 0.806387 | 8.433804e-50 | -8.615850e-47 |
Msa0197780 | Msa0861600 | 0.813714 | 2.225137e-51 | -8.615850e-47 |
Msa0197780 | Msa0864010 | 0.803978 | 2.693500e-49 | -8.615850e-47 |
Msa0197780 | Msa0869100 | 0.803033 | 4.228667e-49 | -8.615850e-47 |
Msa0197780 | Msa0876060 | 0.801952 | 7.062609e-49 | -8.615850e-47 |
Msa0197780 | Msa0879080 | 0.803261 | 3.793797e-49 | -8.615850e-47 |
Msa0197780 | Msa0879850 | 0.807791 | 4.254036e-50 | -8.615850e-47 |
Msa0197780 | Msa0888940 | 0.830817 | 2.371725e-55 | -8.615850e-47 |
Msa0197780 | Msa0902760 | 0.833111 | 6.434625e-56 | -8.615850e-47 |
Msa0197780 | Msa0906690 | 0.806302 | 8.786344e-50 | -8.615850e-47 |
Msa0197780 | Msa0928120 | 0.805588 | 1.241485e-49 | -8.615850e-47 |
Msa0197780 | Msa0943170 | 0.800570 | 1.354632e-48 | -8.615850e-47 |
Msa0197780 | Msa0944660 | 0.854315 | 1.336126e-61 | -8.615850e-47 |
Msa0197780 | Msa0968590 | 0.800035 | 1.740720e-48 | -8.615850e-47 |
Msa0197780 | Msa0970520 | 0.804545 | 2.051769e-49 | -8.615850e-47 |
Msa0197780 | Msa0970530 | 0.800603 | 1.333557e-48 | -8.615850e-47 |
Msa0197780 | Msa0980940 | 0.828335 | 9.521050e-55 | -8.615850e-47 |
Msa0197780 | Msa0997430 | 0.829364 | 5.365662e-55 | -8.615850e-47 |
Msa0197780 | Msa1004420 | 0.822711 | 2.046307e-53 | -8.615850e-47 |
Msa0197780 | Msa1006840 | 0.817404 | 3.355966e-52 | -8.615850e-47 |
Msa0197780 | Msa1008060 | -0.805487 | 1.303842e-49 | -8.615850e-47 |
Msa0197780 | Msa1009750 | 0.806883 | 6.625618e-50 | -8.615850e-47 |
Msa0197780 | Msa1013400 | 0.829112 | 6.177872e-55 | -8.615850e-47 |
Msa0197780 | Msa1019240 | 0.802224 | 6.210325e-49 | -8.615850e-47 |
Msa0197780 | Msa1019260 | 0.810313 | 1.226332e-50 | -8.615850e-47 |
Msa0197780 | Msa1040840 | 0.811122 | 8.196337e-51 | -8.615850e-47 |
Msa0197780 | Msa1055010 | 0.809397 | 1.931013e-50 | -8.615850e-47 |
Msa0197780 | Msa1066490 | 0.808170 | 3.532305e-50 | -8.615850e-47 |
Msa0197780 | Msa1081150 | 0.818150 | 2.277594e-52 | -8.615850e-47 |
Msa0197780 | Msa1093530 | 0.834503 | 2.886008e-56 | -8.615850e-47 |
Msa0197780 | Msa1093840 | 0.833936 | 4.003558e-56 | -8.615850e-47 |
Msa0197780 | Msa1097820 | 0.800727 | 1.258368e-48 | -8.615850e-47 |
Msa0197780 | Msa1101580 | 0.806023 | 1.006021e-49 | -8.615850e-47 |
Msa0197780 | Msa1104140 | 0.807280 | 5.460964e-50 | -8.615850e-47 |
Msa0197780 | Msa1106700 | 0.820371 | 7.105848e-53 | -8.615850e-47 |
Msa0197780 | Msa1123380 | 0.813793 | 2.138199e-51 | -8.615850e-47 |
Msa0197780 | Msa1126510 | 0.814993 | 1.160732e-51 | -8.615850e-47 |
Msa0197780 | Msa1126770 | 0.810608 | 1.059268e-50 | -8.615850e-47 |
Msa0197780 | Msa1127590 | 0.824610 | 7.354294e-54 | -8.615850e-47 |
Msa0197780 | Msa1127890 | 0.806757 | 7.044389e-50 | -8.615850e-47 |
Msa0197780 | Msa1140690 | 0.822817 | 1.933876e-53 | -8.615850e-47 |
Msa0197780 | Msa1147900 | 0.816938 | 4.272349e-52 | -8.615850e-47 |
Msa0197780 | Msa1174100 | 0.844896 | 5.692152e-59 | -8.615850e-47 |
Msa0197780 | Msa1193290 | 0.823449 | 1.376764e-53 | -8.615850e-47 |
Msa0197780 | Msa1201120 | 0.807184 | 5.722569e-50 | -8.615850e-47 |
Msa0197780 | Msa1201650 | 0.805779 | 1.132324e-49 | -8.615850e-47 |
Msa0197780 | Msa1201830 | 0.809948 | 1.470249e-50 | -8.615850e-47 |
Msa0197780 | Msa1202580 | 0.810979 | 8.803123e-51 | -8.615850e-47 |
Msa0197780 | Msa1207270 | 0.817699 | 2.880574e-52 | -8.615850e-47 |
Msa0197780 | Msa1208160 | 0.801511 | 8.699093e-49 | -8.615850e-47 |
Msa0197780 | Msa1216260 | 0.808146 | 3.574270e-50 | -8.615850e-47 |
Msa0197780 | Msa1218600 | 0.823681 | 1.214862e-53 | -8.615850e-47 |
Msa0197780 | Msa1219000 | 0.808910 | 2.455536e-50 | -8.615850e-47 |
Msa0197780 | Msa1221060 | 0.813341 | 2.688026e-51 | -8.615850e-47 |
Msa0197780 | Msa1227690 | 0.806942 | 6.438419e-50 | -8.615850e-47 |
Msa0197780 | Msa1231820 | 0.809554 | 1.786821e-50 | -8.615850e-47 |
Msa0197780 | Msa1235250 | 0.808093 | 3.668171e-50 | -8.615850e-47 |
Msa0197780 | Msa1251160 | 0.822854 | 1.895943e-53 | -8.615850e-47 |
Msa0197780 | Msa1252190 | 0.803977 | 2.693934e-49 | -8.615850e-47 |
Msa0197780 | Msa1253550 | 0.807611 | 4.644842e-50 | -8.615850e-47 |
Msa0197780 | Msa1254610 | 0.804309 | 2.298232e-49 | -8.615850e-47 |
Msa0197780 | Msa1254710 | 0.834019 | 3.817338e-56 | -8.615850e-47 |
Msa0197780 | Msa1254730 | 0.804169 | 2.457671e-49 | -8.615850e-47 |
Msa0197780 | Msa1257510 | 0.803516 | 3.358764e-49 | -8.615850e-47 |
Msa0197780 | Msa1265630 | 0.814469 | 1.516834e-51 | -8.615850e-47 |
Msa0197780 | Msa1276660 | 0.845730 | 3.385022e-59 | -8.615850e-47 |
Msa0197780 | Msa1292830 | 0.801441 | 8.991451e-49 | -8.615850e-47 |
Msa0197780 | Msa1294820 | 0.807671 | 4.509827e-50 | -8.615850e-47 |
Msa0197780 | Msa1298370 | 0.802002 | 6.899081e-49 | -8.615850e-47 |
Msa0197780 | Msa1303240 | 0.811972 | 5.357166e-51 | -8.615850e-47 |
Msa0197780 | Msa1303250 | 0.826189 | 3.109355e-54 | -8.615850e-47 |
Msa0197780 | Msa1307950 | 0.805073 | 1.591533e-49 | -8.615850e-47 |
Msa0197780 | Msa1317950 | 0.808988 | 2.362871e-50 | -8.615850e-47 |
Msa0197780 | Msa1317960 | 0.815519 | 8.870259e-52 | -8.615850e-47 |
Msa0197780 | Msa1328710 | 0.800544 | 1.371161e-48 | -8.615850e-47 |
Msa0197780 | Msa1333560 | 0.803408 | 3.536868e-49 | -8.615850e-47 |
Msa0197780 | Msa1341070 | 0.819096 | 1.389413e-52 | -8.615850e-47 |
Msa0197780 | Msa1346370 | 0.817284 | 3.571530e-52 | -8.615850e-47 |
Msa0197780 | Msa1349520 | 0.800781 | 1.227116e-48 | -8.615850e-47 |
Msa0197780 | Msa1353060 | 0.815170 | 1.060643e-51 | -8.615850e-47 |
Msa0197780 | Msa1356610 | 0.802157 | 6.408102e-49 | -8.615850e-47 |
Msa0197780 | Msa1361400 | 0.841644 | 4.194651e-58 | -8.615850e-47 |
Msa0197780 | Msa1361410 | 0.811087 | 8.344353e-51 | -8.615850e-47 |
Msa0197780 | Msa1363330 | 0.810941 | 8.973106e-51 | -8.615850e-47 |
Msa0197780 | Msa1365150 | 0.806091 | 9.732401e-50 | -8.615850e-47 |
Msa0197780 | Msa1365600 | 0.800473 | 1.417504e-48 | -8.615850e-47 |
Msa0197780 | Msa1366600 | 0.813428 | 2.572631e-51 | -8.615850e-47 |
Msa0197780 | Msa1367880 | 0.813360 | 2.663068e-51 | -8.615850e-47 |
Msa0197780 | Msa1369150 | 0.824070 | 9.851957e-54 | -8.615850e-47 |
Msa0197780 | Msa1374060 | 0.813338 | 2.691788e-51 | -8.615850e-47 |
Msa0197780 | Msa1376650 | 0.813302 | 2.741493e-51 | -8.615850e-47 |
Msa0197780 | Msa1379760 | 0.809115 | 2.218940e-50 | -8.615850e-47 |
Msa0197780 | Msa1382560 | 0.805051 | 1.608723e-49 | -8.615850e-47 |
Msa0197780 | Msa1386600 | 0.810892 | 9.195715e-51 | -8.615850e-47 |
Msa0197780 | Msa1394290 | 0.813818 | 2.111317e-51 | -8.615850e-47 |
Msa0197780 | Msa1394730 | 0.815118 | 1.089204e-51 | -8.615850e-47 |
Msa0197780 | Msa1406040 | 0.802765 | 4.804124e-49 | -8.615850e-47 |
Msa0197780 | Msa1407970 | 0.802278 | 6.052840e-49 | -8.615850e-47 |
Msa0197780 | Msa1408010 | 0.813193 | 2.896643e-51 | -8.615850e-47 |
Msa0197780 | Msa1411950 | 0.811756 | 5.969364e-51 | -8.615850e-47 |
Msa0197780 | Msa1427060 | 0.823500 | 1.339671e-53 | -8.615850e-47 |
Msa0197780 | Msa1432700 | 0.802541 | 5.342340e-49 | -8.615850e-47 |
Msa0197780 | Msa1443300 | 0.811607 | 6.432997e-51 | -8.615850e-47 |
Msa0197780 | Msa1443930 | 0.803259 | 3.796619e-49 | -8.615850e-47 |
Msa0197780 | Msa1446810 | 0.801295 | 9.631800e-49 | -8.615850e-47 |
Msa0197780 | Msa1447180 | 0.813244 | 2.823948e-51 | -8.615850e-47 |
Msa0197780 | Msa1450720 | 0.803563 | 3.284414e-49 | -8.615850e-47 |
Msa0197780 | Msa1451160 | 0.803135 | 4.028550e-49 | -8.615850e-47 |
Msa0197780 | Msa1454680 | 0.805271 | 1.446752e-49 | -8.615850e-47 |
Msa0197780 | Msa1461300 | 0.813777 | 2.156000e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0197780 | MtrunA17_Chr2g0290601 | 93.548 | 341 | 17 | 1 | 1 | 336 | 1 | 341 | 0.0 | 564 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0197780 | AT5G47680.1 | 66.460 | 322 | 105 | 2 | 7 | 325 | 16 | 337 | 8.09e-134 | 385 |
Find 117 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAACGTTGTTCTTTGGATTT+TGG | 0.161949 | 2_1:-16092814 | Msa0197780:three_prime_UTR |
AATCTATTTAGGATGAATTT+TGG | 0.171342 | 2_1:-16092444 | Msa0197780:three_prime_UTR |
CTTGTTAAAGCGAAAGAATT+AGG | 0.235954 | 2_1:-16096439 | Msa0197780:CDS |
CCTCTTGGAACGTTGTTCTT+TGG | 0.251149 | 2_1:-16092821 | Msa0197780:three_prime_UTR |
TTGAACAAGATATATATAAT+TGG | 0.269988 | 2_1:-16094173 | Msa0197780:CDS |
CCTGCACATCTTTGGCTAAC+TGG | 0.276977 | 2_1:-16094356 | Msa0197780:CDS |
TAGCTTCTTCTCCGCGTTCT+TGG | 0.297523 | 2_1:+16096678 | None:intergenic |
CAAACTGAACCTAAATAAAA+AGG | 0.302071 | 2_1:+16092412 | None:intergenic |
TATTCTGTAGGAATCTATTT+AGG | 0.309485 | 2_1:-16092455 | Msa0197780:three_prime_UTR |
TGGTGGTGGAACAGTGGATT+CGG | 0.312822 | 2_1:+16096720 | None:intergenic |
CAAAACAACGGCAATAGATA+TGG | 0.334309 | 2_1:-16096758 | Msa0197780:exon |
TTGAAGCGAGAATGAGTTTA+CGG | 0.348669 | 2_1:-16096513 | Msa0197780:CDS |
TCATCAACAAGTTTGTTAGA+AGG | 0.359781 | 2_1:+16093019 | None:intergenic |
GTGATACCCCTGCACATCTT+TGG | 0.363917 | 2_1:-16094364 | Msa0197780:CDS |
GTGGATTAGTTGATAGGAAT+AGG | 0.366874 | 2_1:-16094151 | Msa0197780:CDS |
TTGTTAAAGCGAAAGAATTA+GGG | 0.371694 | 2_1:-16096438 | Msa0197780:CDS |
GGCAGATCGTAAGGATGATT+TGG | 0.373805 | 2_1:-16094240 | Msa0197780:CDS |
CTTGAAGATGTCTAGTTCTC+AGG | 0.377122 | 2_1:-16094057 | Msa0197780:intron |
TGTGGCTTTGCCACAACAAT+AGG | 0.386344 | 2_1:+16092674 | None:intergenic |
TAATTGGTGGATTAGTTGAT+AGG | 0.387931 | 2_1:-16094157 | Msa0197780:CDS |
CACAAGTTTCAAATCATTGA+TGG | 0.392956 | 2_1:-16092961 | Msa0197780:three_prime_UTR |
TAAGTCTTATATTGAAGTAT+TGG | 0.396078 | 2_1:-16094261 | Msa0197780:CDS |
CAAACAGCTAAACTACCTAT+TGG | 0.406476 | 2_1:-16094086 | Msa0197780:CDS |
GAGTTTACGGAAGGAGAGAA+TGG | 0.415787 | 2_1:-16096500 | Msa0197780:CDS |
AGAGAAGAAAGCGGCGGCGA+AGG | 0.418398 | 2_1:-16096623 | Msa0197780:CDS |
AAGAGGGTAATTCCATCATA+AGG | 0.436588 | 2_1:+16092838 | None:intergenic |
AGAAATACTACTCAAGTTCC+TGG | 0.437281 | 2_1:-16093221 | Msa0197780:CDS |
TCTGAAGTGGGTTGTGGTGG+TGG | 0.439329 | 2_1:+16096706 | None:intergenic |
AGAAGGAAACTGAACGGAAA+AGG | 0.448551 | 2_1:-16096591 | Msa0197780:CDS |
GTCACACCTCGCAGAAAATC+CGG | 0.448803 | 2_1:+16092864 | None:intergenic |
GGTGGTGGAACAGTGGATTC+GGG | 0.452897 | 2_1:+16096721 | None:intergenic |
ATGCATACTTGTAGTTAAGT+TGG | 0.455539 | 2_1:-16092650 | Msa0197780:three_prime_UTR |
TTACAAGAACCGAACATAGT+AGG | 0.458262 | 2_1:+16092582 | None:intergenic |
TGTAAAACATATTCTTTGAG+AGG | 0.461127 | 2_1:-16092564 | Msa0197780:three_prime_UTR |
CATCAACAAGTTTGTTAGAA+GGG | 0.461175 | 2_1:+16093020 | None:intergenic |
TGAAGTGTAGAGCGTAGAAC+TGG | 0.461467 | 2_1:-16092999 | Msa0197780:exon |
GAACAGTGGATTCGGGTTCG+TGG | 0.461513 | 2_1:+16096728 | None:intergenic |
AACAAGATATATATAATTGG+TGG | 0.462299 | 2_1:-16094170 | Msa0197780:CDS |
CCAGTTAGCCAAAGATGTGC+AGG | 0.463576 | 2_1:+16094356 | None:intergenic |
GGAGAGAATGGAGAAAAGGT+TGG | 0.464442 | 2_1:-16096488 | Msa0197780:CDS |
TTAACCAACATCATCATACT+TGG | 0.470296 | 2_1:-16092299 | Msa0197780:three_prime_UTR |
TCGACGATTCCTACTATGTT+CGG | 0.475571 | 2_1:-16092591 | Msa0197780:three_prime_UTR |
AGCTAGCGAAACAACAAAGA+TGG | 0.480079 | 2_1:-16096660 | Msa0197780:CDS |
GAGAGTTCTGAAGTGGGTTG+TGG | 0.480250 | 2_1:+16096700 | None:intergenic |
AGTTCTGAAGTGGGTTGTGG+TGG | 0.482591 | 2_1:+16096703 | None:intergenic |
AGTTGATAGGAATAGGTTCA+AGG | 0.488910 | 2_1:-16094144 | Msa0197780:CDS |
CTGAACGGAAAAGGAAGGAA+TGG | 0.495923 | 2_1:-16096582 | Msa0197780:CDS |
TTATGATGGAATTACCCTCT+TGG | 0.498320 | 2_1:-16092836 | Msa0197780:three_prime_UTR |
AACTGGCTGCGAAGGAGAGA+TGG | 0.499121 | 2_1:-16094339 | Msa0197780:CDS |
GGAAGGAGAGAATGGAGAAA+AGG | 0.501934 | 2_1:-16096492 | Msa0197780:CDS |
AGAAAGTATAGCGGGGATAA+CGG | 0.504106 | 2_1:-16096557 | Msa0197780:CDS |
GTGGATTCGGGTTCGTGGGA+TGG | 0.505223 | 2_1:+16096733 | None:intergenic |
TAGGTTCAAGGGGATAACTA+TGG | 0.506219 | 2_1:-16094132 | Msa0197780:CDS |
AATTCGTAGTCTCGTTCAGC+AGG | 0.506651 | 2_1:-16096365 | Msa0197780:intron |
TGAAGTATTGGCAGATCGTA+AGG | 0.508636 | 2_1:-16094249 | Msa0197780:CDS |
TGTATATATATTGTTTGAGT+CGG | 0.511992 | 2_1:+16092487 | None:intergenic |
AGATACCGGGATTTGATAAG+TGG | 0.516271 | 2_1:-16094301 | Msa0197780:CDS |
GTAAAACATATTCTTTGAGA+GGG | 0.520534 | 2_1:-16092563 | Msa0197780:three_prime_UTR |
ATGTATTGCTATGCGGTGAA+TGG | 0.524164 | 2_1:-16094392 | Msa0197780:CDS |
GAATGGGAAGAAAGTATAGC+GGG | 0.525752 | 2_1:-16096565 | Msa0197780:CDS |
TTCTTGGAGAGTTCTGAAGT+GGG | 0.527632 | 2_1:+16096694 | None:intergenic |
TTTGTTGAGAATGGAGAGAG+AGG | 0.527935 | 2_1:+16096777 | None:intergenic |
GTTCTTGGAGAGTTCTGAAG+TGG | 0.533454 | 2_1:+16096693 | None:intergenic |
GGCGAAGGAGCAGAAGAAGA+AGG | 0.534673 | 2_1:-16096608 | Msa0197780:CDS |
AGTTCCTGGAGACAAGGGAT+TGG | 0.534892 | 2_1:-16093207 | Msa0197780:CDS |
AGAGGGTAATTCCATCATAA+GGG | 0.537730 | 2_1:+16092839 | None:intergenic |
AACAGTGGATTCGGGTTCGT+GGG | 0.540655 | 2_1:+16096729 | None:intergenic |
TACTCAAGTTCCTGGAGACA+AGG | 0.542557 | 2_1:-16093213 | Msa0197780:CDS |
ACAAGTTTCAAATCATTGAT+GGG | 0.545384 | 2_1:-16092960 | Msa0197780:three_prime_UTR |
CTTTGGCTAACTGGCTGCGA+AGG | 0.546041 | 2_1:-16094347 | Msa0197780:CDS |
GGGTTGTGGTGGTGGAACAG+TGG | 0.548162 | 2_1:+16096714 | None:intergenic |
GAACAATGGTCCTCTCTACA+AGG | 0.548940 | 2_1:+16092612 | None:intergenic |
TGTTTGCTTGCGCACACCAA+GGG | 0.549981 | 2_1:+16092747 | None:intergenic |
AAACAATATATATACACTTG+TGG | 0.550055 | 2_1:-16092480 | Msa0197780:three_prime_UTR |
GTTGATAGGAATAGGTTCAA+GGG | 0.551035 | 2_1:-16094143 | Msa0197780:CDS |
ATCTTCAAGAAATTGCCAAT+AGG | 0.551379 | 2_1:+16094071 | None:intergenic |
AGGTGTGACCTCCCTTATGA+TGG | 0.555087 | 2_1:-16092850 | Msa0197780:three_prime_UTR |
AGATCACAAGCTGATTCAGA+AGG | 0.558701 | 2_1:-16093148 | Msa0197780:CDS |
TGAACGGAAAAGGAAGGAAT+GGG | 0.562057 | 2_1:-16096581 | Msa0197780:CDS |
AACGGAGGAAGAGAGAGTGA+AGG | 0.562848 | 2_1:-16096539 | Msa0197780:CDS |
ATGATCCACTTATCAAATCC+CGG | 0.563131 | 2_1:+16094296 | None:intergenic |
ACAGTTATGTTATTTGACAA+TGG | 0.565339 | 2_1:-16092784 | Msa0197780:three_prime_UTR |
TGCAAGATGTCAAATATCAT+AGG | 0.566365 | 2_1:+16092719 | None:intergenic |
GCTAGCGAAACAACAAAGAT+GGG | 0.569754 | 2_1:-16096659 | Msa0197780:CDS |
GTATCTAACGGCTGATTCAG+AGG | 0.575403 | 2_1:-16094216 | Msa0197780:CDS |
GGATGATTTGGTGTATCTAA+CGG | 0.578478 | 2_1:-16094228 | Msa0197780:CDS |
CCAAAGAACAACGTTCCAAG+AGG | 0.578724 | 2_1:+16092821 | None:intergenic |
TTGATAGGAATAGGTTCAAG+GGG | 0.582030 | 2_1:-16094142 | Msa0197780:CDS |
TGCAGATAATACTGTAGATG+AGG | 0.589269 | 2_1:-16093122 | Msa0197780:CDS |
CACTATTGAGCCTTGTAGAG+AGG | 0.590068 | 2_1:-16092622 | Msa0197780:three_prime_UTR |
GGAAACTGAACGGAAAAGGA+AGG | 0.593141 | 2_1:-16096587 | Msa0197780:CDS |
ACACTTGTGGAATATTCTGT+AGG | 0.601308 | 2_1:-16092467 | Msa0197780:three_prime_UTR |
AGCGAGAATGAGTTTACGGA+AGG | 0.602257 | 2_1:-16096509 | Msa0197780:CDS |
TGATCCAAGTATGATGATGT+TGG | 0.604115 | 2_1:+16092295 | None:intergenic |
CAGTTAGCCAAAGATGTGCA+GGG | 0.609008 | 2_1:+16094357 | None:intergenic |
TGATAAGTGGATCATCGAGA+AGG | 0.617301 | 2_1:-16094288 | Msa0197780:CDS |
AGAAGAAGAAGGAAACTGAA+CGG | 0.617838 | 2_1:-16096597 | Msa0197780:CDS |
TAACTACAAGTATGCATGTG+TGG | 0.620464 | 2_1:+16092656 | None:intergenic |
ATGGAGAAAGCACAAGAGCA+AGG | 0.622205 | 2_1:-16094113 | Msa0197780:CDS |
TCTTTGCTGTTATCCCTCAG+AGG | 0.622550 | 2_1:-16093174 | Msa0197780:CDS |
ACGAGACTACGAATTTCTTG+AGG | 0.622869 | 2_1:+16096373 | None:intergenic |
TTACGTATGTTAATGTATGT+CGG | 0.624289 | 2_1:-16092340 | Msa0197780:three_prime_UTR |
ACTCAAGTTCCTGGAGACAA+GGG | 0.624343 | 2_1:-16093212 | Msa0197780:CDS |
AAAGAAAGCAGAGAAGAAAG+CGG | 0.626250 | 2_1:-16096632 | Msa0197780:CDS |
ATGTTTGCTTGCGCACACCA+AGG | 0.627820 | 2_1:+16092746 | None:intergenic |
CTCCATTCTCAACAAAACAA+CGG | 0.636475 | 2_1:-16096770 | Msa0197780:five_prime_UTR |
GAAAGCAGAGAAGAAAGCGG+CGG | 0.640363 | 2_1:-16096629 | Msa0197780:CDS |
TAGTAGGAATCGTCGAACAA+TGG | 0.644966 | 2_1:+16092598 | None:intergenic |
CAAAGAACAACGTTCCAAGA+GGG | 0.647171 | 2_1:+16092822 | None:intergenic |
TTCAGAACTCTCCAAGAACG+CGG | 0.669890 | 2_1:-16096689 | Msa0197780:CDS |
GGGTAATTCCATCATAAGGG+AGG | 0.673707 | 2_1:+16092842 | None:intergenic |
TCAGTATGTACCTATTGTTG+TGG | 0.675940 | 2_1:-16092684 | Msa0197780:three_prime_UTR |
GGAATGGGAAGAAAGTATAG+CGG | 0.683390 | 2_1:-16096566 | Msa0197780:CDS |
AGTTAGCCAAAGATGTGCAG+GGG | 0.690170 | 2_1:+16094358 | None:intergenic |
AAGTATAGCGGGGATAACGG+AGG | 0.708957 | 2_1:-16096554 | Msa0197780:CDS |
AATGGGAAGAAAGTATAGCG+GGG | 0.715050 | 2_1:-16096564 | Msa0197780:CDS |
GTAGATAATGTATTGCTATG+CGG | 0.772427 | 2_1:-16094399 | Msa0197780:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAATTTATTAATTATTAAT+AGG | - | chr2_1:16092780-16092799 | Msa0197780:three_prime_UTR | 0.0% |
!! | AGTGATTATATTTATATTAA+AGG | - | chr2_1:16092811-16092830 | Msa0197780:three_prime_UTR | 10.0% |
!! | ATTATATTTATATTAAAGGT+CGG | - | chr2_1:16092815-16092834 | Msa0197780:three_prime_UTR | 10.0% |
!! | TAATATATGTTTAAATAAGA+CGG | - | chr2_1:16094500-16094519 | Msa0197780:intron | 10.0% |
!!! | TTTTTTTGTGAATTTTTTGA+TGG | - | chr2_1:16092699-16092718 | Msa0197780:three_prime_UTR | 15.0% |
!!! | TTTTTTGTGAATTTTTTGAT+GGG | - | chr2_1:16092700-16092719 | Msa0197780:three_prime_UTR | 15.0% |
!!! | CTTATTTTCATTAGTTTATA+TGG | - | chr2_1:16092947-16092966 | Msa0197780:three_prime_UTR | 15.0% |
!! | ATAGCTTATTATATTTAATC+AGG | - | chr2_1:16093826-16093845 | Msa0197780:intron | 15.0% |
!! | AAAAATGAGATTCAAAATTA+GGG | + | chr2_1:16094045-16094064 | None:intergenic | 15.0% |
!! | AAAAAATGAGATTCAAAATT+AGG | + | chr2_1:16094046-16094065 | None:intergenic | 15.0% |
!! | TTTGAATATTGTTGTATTAA+TGG | - | chr2_1:16094386-16094405 | Msa0197780:CDS | 15.0% |
!! | TTATATTTCTTATTGTGTAT+TGG | - | chr2_1:16094575-16094594 | Msa0197780:intron | 15.0% |
!! | TTGAACAAGATATATATAAT+TGG | - | chr2_1:16094851-16094870 | Msa0197780:intron | 15.0% |
!! | TGATCTATGAAATTATAATT+TGG | - | chr2_1:16095402-16095421 | Msa0197780:intron | 15.0% |
!!! | TTTAGATTGTTTATGGTTTT+TGG | - | chr2_1:16092726-16092745 | Msa0197780:three_prime_UTR | 20.0% |
!!! | TTAGATTGTTTATGGTTTTT+GGG | - | chr2_1:16092727-16092746 | Msa0197780:three_prime_UTR | 20.0% |
!!! | TATTGTGTATTGGTAAATTA+TGG | - | chr2_1:16094585-16094604 | Msa0197780:intron | 20.0% |
!! | TAATCAATTGAAAAAGATAC+CGG | - | chr2_1:16094709-16094728 | Msa0197780:intron | 20.0% |
!!! | TAAGTCTTATATTGAAGTAT+TGG | - | chr2_1:16094763-16094782 | Msa0197780:intron | 20.0% |
!! | AACAAGATATATATAATTGG+TGG | - | chr2_1:16094854-16094873 | Msa0197780:intron | 20.0% |
!!! | AAGTTTGTATTTTGTATCAT+TGG | - | chr2_1:16095064-16095083 | Msa0197780:intron | 20.0% |
!!! | GTACTATGTATTGATTATAT+TGG | - | chr2_1:16095098-16095117 | Msa0197780:intron | 20.0% |
!!! | TACTTGATAACACTTAAAAA+TGG | - | chr2_1:16095706-16095725 | Msa0197780:intron | 20.0% |
!!! | ACTTGATAACACTTAAAAAT+GGG | - | chr2_1:16095707-16095726 | Msa0197780:intron | 20.0% |
!! | TGTATATATATTGTTTGAGT+CGG | + | chr2_1:16096540-16096559 | None:intergenic | 20.0% |
!! | AAACAATATATATACACTTG+TGG | - | chr2_1:16096544-16096563 | Msa0197780:CDS | 20.0% |
!!! | AATCTATTTAGGATGAATTT+TGG | - | chr2_1:16096580-16096599 | Msa0197780:CDS | 20.0% |
!!! | ATCTATTTAGGATGAATTTT+GGG | - | chr2_1:16096581-16096600 | Msa0197780:CDS | 20.0% |
!! | AACCTAAATAAAAAGGTTAA+TGG | + | chr2_1:16096608-16096627 | None:intergenic | 20.0% |
!!! | TTGAACTATTTTTGAGTTAA+GGG | + | chr2_1:16096640-16096659 | None:intergenic | 20.0% |
!!! | ATTGAACTATTTTTGAGTTA+AGG | + | chr2_1:16096641-16096660 | None:intergenic | 20.0% |
!!! | TGCTTAAACTCTAAATTTTT+GGG | + | chr2_1:16096803-16096822 | None:intergenic | 20.0% |
!!! | TTGCTTAAACTCTAAATTTT+TGG | + | chr2_1:16096804-16096823 | None:intergenic | 20.0% |
! | TTGTTAAAGCGAAAGAATTA+GGG | - | chr2_1:16092586-16092605 | Msa0197780:three_prime_UTR | 25.0% |
!!! | TGGGTTTTTTAGATTGTTTA+TGG | - | chr2_1:16092719-16092738 | Msa0197780:three_prime_UTR | 25.0% |
! | ATTTATATTAAAGGTCGGTT+TGG | - | chr2_1:16092820-16092839 | Msa0197780:three_prime_UTR | 25.0% |
! | AAAATAGGGTTAATGGAAAT+TGG | - | chr2_1:16093536-16093555 | Msa0197780:intron | 25.0% |
! | AAATAGGGTTAATGGAAATT+GGG | - | chr2_1:16093537-16093556 | Msa0197780:intron | 25.0% |
!!! | TTGGACCAGTTTTTTTATAT+TGG | - | chr2_1:16093572-16093591 | Msa0197780:intron | 25.0% |
!!! | TGGACCAGTTTTTTTATATT+GGG | - | chr2_1:16093573-16093592 | Msa0197780:intron | 25.0% |
! | AAAGCCCAATATAAAAAAAC+TGG | + | chr2_1:16093580-16093599 | None:intergenic | 25.0% |
! | AATTACGAATTATGTGACTA+TGG | - | chr2_1:16093959-16093978 | Msa0197780:intron | 25.0% |
!!! | TCATTTTTTAGCTCTATGTA+TGG | - | chr2_1:16094057-16094076 | Msa0197780:intron | 25.0% |
!!! | AAAATTCTATAGCGGATAAT+GGG | + | chr2_1:16094111-16094130 | None:intergenic | 25.0% |
!!! | AAAAATTCTATAGCGGATAA+TGG | + | chr2_1:16094112-16094131 | None:intergenic | 25.0% |
! | GAACTCAAAAAATTCTATAG+CGG | + | chr2_1:16094119-16094138 | None:intergenic | 25.0% |
! | TTAGTCTATGTTATCAATCT+CGG | + | chr2_1:16094160-16094179 | None:intergenic | 25.0% |
! | TTGTAAAATCATGTCAACAT+AGG | + | chr2_1:16094296-16094315 | None:intergenic | 25.0% |
!!! | CGTATATTTTTGGTATAAAC+TGG | - | chr2_1:16094339-16094358 | Msa0197780:CDS | 25.0% |
!! | TGTATTGGTAAATTATGGAA+TGG | - | chr2_1:16094590-16094609 | Msa0197780:intron | 25.0% |
! | AATCAATTGAAAAAGATACC+GGG | - | chr2_1:16094710-16094729 | Msa0197780:intron | 25.0% |
!!! | TCTATCACATTACTCTTTTT+TGG | - | chr2_1:16095425-16095444 | Msa0197780:intron | 25.0% |
!! | ATTGCTGATCTTCAATTTTA+TGG | - | chr2_1:16095624-16095643 | Msa0197780:intron | 25.0% |
! | AAGTAAAAAGAAATGTGTTG+AGG | - | chr2_1:16095977-16095996 | Msa0197780:intron | 25.0% |
! | ACAAGTTTCAAATCATTGAT+GGG | - | chr2_1:16096064-16096083 | Msa0197780:intron | 25.0% |
!! | ACAGTTATGTTATTTGACAA+TGG | - | chr2_1:16096240-16096259 | Msa0197780:intron | 25.0% |
! | TGTAAAACATATTCTTTGAG+AGG | - | chr2_1:16096460-16096479 | Msa0197780:CDS | 25.0% |
!! | GTAAAACATATTCTTTGAGA+GGG | - | chr2_1:16096461-16096480 | Msa0197780:CDS | 25.0% |
! | TATTCTGTAGGAATCTATTT+AGG | - | chr2_1:16096569-16096588 | Msa0197780:CDS | 25.0% |
!!! | GTCCATTAACCTTTTTATTT+AGG | - | chr2_1:16096603-16096622 | Msa0197780:CDS | 25.0% |
! | CAAACTGAACCTAAATAAAA+AGG | + | chr2_1:16096615-16096634 | None:intergenic | 25.0% |
! | TTACGTATGTTAATGTATGT+CGG | - | chr2_1:16096684-16096703 | Msa0197780:CDS | 25.0% |
!!! | GGAGGAAAAAAAATTGATTT+TGG | + | chr2_1:16096782-16096801 | None:intergenic | 25.0% |
!!! | TTAAACTCTAAATTTTTGGG+AGG | + | chr2_1:16096800-16096819 | None:intergenic | 25.0% |
AGAAAAATGAGAAGAAAGAG+AGG | - | chr2_1:16092562-16092581 | Msa0197780:three_prime_UTR | 30.0% | |
CTTGTTAAAGCGAAAGAATT+AGG | - | chr2_1:16092585-16092604 | Msa0197780:three_prime_UTR | 30.0% | |
TTAAGCTGTTTATCTGAACA+AGG | - | chr2_1:16093059-16093078 | Msa0197780:CDS | 30.0% | |
CTATGTTGTCAATACTATAG+CGG | - | chr2_1:16093096-16093115 | Msa0197780:CDS | 30.0% | |
TTAGAGTTACATAATTCGCT+GGG | - | chr2_1:16093240-16093259 | Msa0197780:CDS | 30.0% | |
ATGAGGAAGATGATGAAAAT+AGG | - | chr2_1:16093521-16093540 | Msa0197780:intron | 30.0% | |
TGAGGAAGATGATGAAAATA+GGG | - | chr2_1:16093522-16093541 | Msa0197780:intron | 30.0% | |
GATGATGAAAATAGGGTTAA+TGG | - | chr2_1:16093529-16093548 | Msa0197780:intron | 30.0% | |
ACATAATTCGTAATTCGTTC+TGG | + | chr2_1:16093954-16093973 | None:intergenic | 30.0% | |
TAAAATCATGTCAACATAGG+AGG | + | chr2_1:16094293-16094312 | None:intergenic | 30.0% | |
! | ATTTTACAATCTCAGCCAAT+TGG | - | chr2_1:16094307-16094326 | Msa0197780:CDS | 30.0% |
! | TTTTACAATCTCAGCCAATT+GGG | - | chr2_1:16094308-16094327 | Msa0197780:CDS | 30.0% |
! | GGATGTTTCTCGTATATTTT+TGG | - | chr2_1:16094329-16094348 | Msa0197780:CDS | 30.0% |
!!! | TATTTTTGGTATAAACTGGC+AGG | - | chr2_1:16094343-16094362 | Msa0197780:CDS | 30.0% |
!!! | ATTTTTGGTATAAACTGGCA+GGG | - | chr2_1:16094344-16094363 | Msa0197780:CDS | 30.0% |
!!! | AGTGAGTTTTGAATGTGTAT+TGG | - | chr2_1:16094460-16094479 | Msa0197780:intron | 30.0% |
GTAGATAATGTATTGCTATG+CGG | - | chr2_1:16094625-16094644 | Msa0197780:intron | 30.0% | |
!! | TAATTGGTGGATTAGTTGAT+AGG | - | chr2_1:16094867-16094886 | Msa0197780:intron | 30.0% |
ATCTTCAAGAAATTGCCAAT+AGG | + | chr2_1:16094956-16094975 | None:intergenic | 30.0% | |
! | TACAAACTTTTAGCAGTCAA+AGG | + | chr2_1:16095053-16095072 | None:intergenic | 30.0% |
CAAAAGAGAGAGAGAAAAAA+TGG | - | chr2_1:16095220-16095239 | Msa0197780:intron | 30.0% | |
ACCATTTAGCTGAAATTACT+GGG | - | chr2_1:16095339-16095358 | Msa0197780:intron | 30.0% | |
TTCAGTCCTACATCTATAAA+GGG | + | chr2_1:16095561-16095580 | None:intergenic | 30.0% | |
ATTCAGTCCTACATCTATAA+AGG | + | chr2_1:16095562-16095581 | None:intergenic | 30.0% | |
TTATAGATGTAGGACTGAAT+TGG | - | chr2_1:16095562-16095581 | Msa0197780:intron | 30.0% | |
TAAATCACCAACTTAGTCTA+GGG | + | chr2_1:16095688-16095707 | None:intergenic | 30.0% | |
AAATGTCTTAGACACACAAA+TGG | + | chr2_1:16095738-16095757 | None:intergenic | 30.0% | |
TATTTCTCATTTGAGCTTTC+AGG | - | chr2_1:16095758-16095777 | Msa0197780:intron | 30.0% | |
TGAAGAAAAAGATGATCTAC+TGG | - | chr2_1:16095953-16095972 | Msa0197780:intron | 30.0% | |
!! | CATCAACAAGTTTGTTAGAA+GGG | + | chr2_1:16096007-16096026 | None:intergenic | 30.0% |
!! | TCATCAACAAGTTTGTTAGA+AGG | + | chr2_1:16096008-16096027 | None:intergenic | 30.0% |
CACAAGTTTCAAATCATTGA+TGG | - | chr2_1:16096063-16096082 | Msa0197780:intron | 30.0% | |
TGCAAGATGTCAAATATCAT+AGG | + | chr2_1:16096308-16096327 | None:intergenic | 30.0% | |
ATGCATACTTGTAGTTAAGT+TGG | - | chr2_1:16096374-16096393 | Msa0197780:CDS | 30.0% | |
TTAACCAACATCATCATACT+TGG | - | chr2_1:16096725-16096744 | Msa0197780:CDS | 30.0% | |
CTCCATTCTCAACAAAACAA+CGG | - | chr2_1:16092254-16092273 | Msa0197780:three_prime_UTR | 35.0% | |
CAAAACAACGGCAATAGATA+TGG | - | chr2_1:16092266-16092285 | Msa0197780:three_prime_UTR | 35.0% | |
AAAGAAAGCAGAGAAGAAAG+CGG | - | chr2_1:16092392-16092411 | Msa0197780:three_prime_UTR | 35.0% | |
AGAAGAAGAAGGAAACTGAA+CGG | - | chr2_1:16092427-16092446 | Msa0197780:three_prime_UTR | 35.0% | |
TTGAAGCGAGAATGAGTTTA+CGG | - | chr2_1:16092511-16092530 | Msa0197780:three_prime_UTR | 35.0% | |
AAACATTTGCGAGACTGTTT+AGG | - | chr2_1:16092873-16092892 | Msa0197780:three_prime_UTR | 35.0% | |
CGAATTATGTAACTCTAAGC+GGG | + | chr2_1:16093238-16093257 | None:intergenic | 35.0% | |
GCGAATTATGTAACTCTAAG+CGG | + | chr2_1:16093239-16093258 | None:intergenic | 35.0% | |
CTTAGAGTTACATAATTCGC+TGG | - | chr2_1:16093239-16093258 | Msa0197780:CDS | 35.0% | |
TGATTCTTCCAAATTCGTGA+AGG | - | chr2_1:16093320-16093339 | Msa0197780:intron | 35.0% | |
AGAAGAATTCGGTACGTATA+GGG | + | chr2_1:16093894-16093913 | None:intergenic | 35.0% | |
TACGCTACATGAGAAGAATT+CGG | + | chr2_1:16093905-16093924 | None:intergenic | 35.0% | |
TTCCCTCAAAATTGCAATAG+CGG | + | chr2_1:16094010-16094029 | None:intergenic | 35.0% | |
AACAAAGTCAGACAAAGCAA+AGG | - | chr2_1:16094210-16094229 | Msa0197780:CDS | 35.0% | |
TATACGAGAAACATCCCAAT+TGG | + | chr2_1:16094325-16094344 | None:intergenic | 35.0% | |
! | GAATGTGTATTGGTAAACGA+TGG | - | chr2_1:16094470-16094489 | Msa0197780:intron | 35.0% |
! | TGTATTGGTAAACGATGGAA+TGG | - | chr2_1:16094475-16094494 | Msa0197780:intron | 35.0% |
ATGATCCACTTATCAAATCC+CGG | + | chr2_1:16094731-16094750 | None:intergenic | 35.0% | |
!! | GGATGATTTGGTGTATCTAA+CGG | - | chr2_1:16094796-16094815 | Msa0197780:intron | 35.0% |
!! | GTGGATTAGTTGATAGGAAT+AGG | - | chr2_1:16094873-16094892 | Msa0197780:intron | 35.0% |
!! | AGTTGATAGGAATAGGTTCA+AGG | - | chr2_1:16094880-16094899 | Msa0197780:intron | 35.0% |
! | GTTGATAGGAATAGGTTCAA+GGG | - | chr2_1:16094881-16094900 | Msa0197780:intron | 35.0% |
TTGATAGGAATAGGTTCAAG+GGG | - | chr2_1:16094882-16094901 | Msa0197780:intron | 35.0% | |
CAAACAGCTAAACTACCTAT+TGG | - | chr2_1:16094938-16094957 | Msa0197780:intron | 35.0% | |
!!! | TAACCCTCTTGTTTTTGCTT+TGG | - | chr2_1:16095011-16095030 | Msa0197780:intron | 35.0% |
!!! | AACCCTCTTGTTTTTGCTTT+GGG | - | chr2_1:16095012-16095031 | Msa0197780:intron | 35.0% |
AGAGACGATTGAGAGAAAAT+AGG | - | chr2_1:16095178-16095197 | Msa0197780:intron | 35.0% | |
GAGACGATTGAGAGAAAATA+GGG | - | chr2_1:16095179-16095198 | Msa0197780:intron | 35.0% | |
AAGAGAGAGAGAAAAAATGG+AGG | - | chr2_1:16095223-16095242 | Msa0197780:intron | 35.0% | |
AGAGAGAGAGAAAAAATGGA+GGG | - | chr2_1:16095224-16095243 | Msa0197780:intron | 35.0% | |
AATGTAAAAGAACCTACCGA+TGG | + | chr2_1:16095283-16095302 | None:intergenic | 35.0% | |
CACCATTTAGCTGAAATTAC+TGG | - | chr2_1:16095338-16095357 | Msa0197780:intron | 35.0% | |
CCATTTAGCTGAAATTACTG+GGG | - | chr2_1:16095340-16095359 | Msa0197780:intron | 35.0% | |
ATGTGTCAAAGTGACTAATG+TGG | - | chr2_1:16095470-16095489 | Msa0197780:intron | 35.0% | |
TTGAAGATCAGCAATCACAT+TGG | + | chr2_1:16095619-16095638 | None:intergenic | 35.0% | |
TAAATTGCCCTAGACTAAGT+TGG | - | chr2_1:16095678-16095697 | Msa0197780:intron | 35.0% | |
GTAAATCACCAACTTAGTCT+AGG | + | chr2_1:16095689-16095708 | None:intergenic | 35.0% | |
AGAAATACTACTCAAGTTCC+TGG | - | chr2_1:16095803-16095822 | Msa0197780:intron | 35.0% | |
TGCAGATAATACTGTAGATG+AGG | - | chr2_1:16095902-16095921 | Msa0197780:intron | 35.0% | |
!!! | GTTTTTTGACAACTTGTGAC+CGG | - | chr2_1:16096141-16096160 | Msa0197780:intron | 35.0% |
AGAGGGTAATTCCATCATAA+GGG | + | chr2_1:16096188-16096207 | None:intergenic | 35.0% | |
AAGAGGGTAATTCCATCATA+AGG | + | chr2_1:16096189-16096208 | None:intergenic | 35.0% | |
! | TTATGATGGAATTACCCTCT+TGG | - | chr2_1:16096188-16096207 | Msa0197780:intron | 35.0% |
! | GAACGTTGTTCTTTGGATTT+TGG | - | chr2_1:16096210-16096229 | Msa0197780:intron | 35.0% |
TCAGTATGTACCTATTGTTG+TGG | - | chr2_1:16096340-16096359 | Msa0197780:intron | 35.0% | |
TAACTACAAGTATGCATGTG+TGG | + | chr2_1:16096371-16096390 | None:intergenic | 35.0% | |
TTACAAGAACCGAACATAGT+AGG | + | chr2_1:16096445-16096464 | None:intergenic | 35.0% | |
! | TAATTTTCGCTTGAGTGTTC+AGG | + | chr2_1:16096508-16096527 | None:intergenic | 35.0% |
ACACTTGTGGAATATTCTGT+AGG | - | chr2_1:16096557-16096576 | Msa0197780:CDS | 35.0% | |
! | TGATCCAAGTATGATGATGT+TGG | + | chr2_1:16096732-16096751 | None:intergenic | 35.0% |
TTTGTTGAGAATGGAGAGAG+AGG | + | chr2_1:16092250-16092269 | None:intergenic | 40.0% | |
!! | TGCCGTTGTTTTGTTGAGAA+TGG | + | chr2_1:16092259-16092278 | None:intergenic | 40.0% |
!! | TTCTTGGAGAGTTCTGAAGT+GGG | + | chr2_1:16092333-16092352 | None:intergenic | 40.0% |
AGCTAGCGAAACAACAAAGA+TGG | - | chr2_1:16092364-16092383 | Msa0197780:three_prime_UTR | 40.0% | |
GCTAGCGAAACAACAAAGAT+GGG | - | chr2_1:16092365-16092384 | Msa0197780:three_prime_UTR | 40.0% | |
AGAAGGAAACTGAACGGAAA+AGG | - | chr2_1:16092433-16092452 | Msa0197780:three_prime_UTR | 40.0% | |
TGAACGGAAAAGGAAGGAAT+GGG | - | chr2_1:16092443-16092462 | Msa0197780:three_prime_UTR | 40.0% | |
! | GGAATGGGAAGAAAGTATAG+CGG | - | chr2_1:16092458-16092477 | Msa0197780:three_prime_UTR | 40.0% |
! | GAATGGGAAGAAAGTATAGC+GGG | - | chr2_1:16092459-16092478 | Msa0197780:three_prime_UTR | 40.0% |
! | AATGGGAAGAAAGTATAGCG+GGG | - | chr2_1:16092460-16092479 | Msa0197780:three_prime_UTR | 40.0% |
! | AGAAAGTATAGCGGGGATAA+CGG | - | chr2_1:16092467-16092486 | Msa0197780:three_prime_UTR | 40.0% |
ACGAGACTACGAATTTCTTG+AGG | + | chr2_1:16092654-16092673 | None:intergenic | 40.0% | |
ACTATTGCTGCTACTCTCAA+TGG | + | chr2_1:16093172-16093191 | None:intergenic | 40.0% | |
ATTGAGAGTAGCAGCAATAG+TGG | - | chr2_1:16093171-16093190 | Msa0197780:CDS | 40.0% | |
AGTTACATAATTCGCTGGGT+TGG | - | chr2_1:16093244-16093263 | Msa0197780:CDS | 40.0% | |
CACGAATTCCTTCACGAATT+TGG | + | chr2_1:16093331-16093350 | None:intergenic | 40.0% | |
CAAATTCGTGAAGGAATTCG+TGG | - | chr2_1:16093329-16093348 | Msa0197780:intron | 40.0% | |
GACTGGAGAATGATGAAACA+TGG | - | chr2_1:16093452-16093471 | Msa0197780:intron | 40.0% | |
! | TGATGAAACATGGTTGACTC+TGG | - | chr2_1:16093462-16093481 | Msa0197780:intron | 40.0% |
ATATTGGGCTTTGCTCAACT+TGG | - | chr2_1:16093588-16093607 | Msa0197780:intron | 40.0% | |
TTGCCTGCAGAGAAAACATA+TGG | - | chr2_1:16093623-16093642 | Msa0197780:intron | 40.0% | |
! | ATGCCATATGTTTTCTCTGC+AGG | + | chr2_1:16093629-16093648 | None:intergenic | 40.0% |
TATAAAGCTTCGGTACGCTT+CGG | + | chr2_1:16093870-16093889 | None:intergenic | 40.0% | |
! | CGTATAGGGGTATAAAGCTT+CGG | + | chr2_1:16093880-16093899 | None:intergenic | 40.0% |
GAAGAATTCGGTACGTATAG+GGG | + | chr2_1:16093893-16093912 | None:intergenic | 40.0% | |
GAGAAGAATTCGGTACGTAT+AGG | + | chr2_1:16093895-16093914 | None:intergenic | 40.0% | |
TCGTAATTCGTTCTGGTATG+CGG | + | chr2_1:16093947-16093966 | None:intergenic | 40.0% | |
ATGTATTGCTATGCGGTGAA+TGG | - | chr2_1:16094632-16094651 | Msa0197780:intron | 40.0% | |
AGATACCGGGATTTGATAAG+TGG | - | chr2_1:16094723-16094742 | Msa0197780:intron | 40.0% | |
TGATAAGTGGATCATCGAGA+AGG | - | chr2_1:16094736-16094755 | Msa0197780:intron | 40.0% | |
!! | TGAAGTATTGGCAGATCGTA+AGG | - | chr2_1:16094775-16094794 | Msa0197780:intron | 40.0% |
TAGGTTCAAGGGGATAACTA+TGG | - | chr2_1:16094892-16094911 | Msa0197780:intron | 40.0% | |
!! | CTTGAAGATGTCTAGTTCTC+AGG | - | chr2_1:16094967-16094986 | Msa0197780:intron | 40.0% |
AGCCCAAAGCAAAAACAAGA+GGG | + | chr2_1:16095017-16095036 | None:intergenic | 40.0% | |
ATTGGATCATCTTCTGCAAG+TGG | - | chr2_1:16095116-16095135 | Msa0197780:intron | 40.0% | |
GAGAGAGAGAAAAAATGGAG+GGG | - | chr2_1:16095225-16095244 | Msa0197780:intron | 40.0% | |
AGAGAGAGAAAAAATGGAGG+GGG | - | chr2_1:16095226-16095245 | Msa0197780:intron | 40.0% | |
CCCCAGTAATTTCAGCTAAA+TGG | + | chr2_1:16095343-16095362 | None:intergenic | 40.0% | |
CTATAAAGGGTCGCTCAATT+TGG | + | chr2_1:16095548-16095567 | None:intergenic | 40.0% | |
! | CTTGTGATCTTTTCCTCTGA+GGG | + | chr2_1:16095866-16095885 | None:intergenic | 40.0% |
! | AGATCACAAGCTGATTCAGA+AGG | - | chr2_1:16095876-16095895 | Msa0197780:intron | 40.0% |
CAAAGAACAACGTTCCAAGA+GGG | + | chr2_1:16096205-16096224 | None:intergenic | 40.0% | |
GGTGAACGAAAAATATCCCT+TGG | - | chr2_1:16096261-16096280 | Msa0197780:intron | 40.0% | |
TAGTAGGAATCGTCGAACAA+TGG | + | chr2_1:16096429-16096448 | None:intergenic | 40.0% | |
TCGACGATTCCTACTATGTT+CGG | - | chr2_1:16096433-16096452 | Msa0197780:CDS | 40.0% | |
!! | GTTCTTGGAGAGTTCTGAAG+TGG | + | chr2_1:16092334-16092353 | None:intergenic | 45.0% |
TTCAGAACTCTCCAAGAACG+CGG | - | chr2_1:16092335-16092354 | Msa0197780:three_prime_UTR | 45.0% | |
GGAAACTGAACGGAAAAGGA+AGG | - | chr2_1:16092437-16092456 | Msa0197780:three_prime_UTR | 45.0% | |
CTGAACGGAAAAGGAAGGAA+TGG | - | chr2_1:16092442-16092461 | Msa0197780:three_prime_UTR | 45.0% | |
AGCGAGAATGAGTTTACGGA+AGG | - | chr2_1:16092515-16092534 | Msa0197780:three_prime_UTR | 45.0% | |
GAGTTTACGGAAGGAGAGAA+TGG | - | chr2_1:16092524-16092543 | Msa0197780:three_prime_UTR | 45.0% | |
GGAAGGAGAGAATGGAGAAA+AGG | - | chr2_1:16092532-16092551 | Msa0197780:three_prime_UTR | 45.0% | |
GGAGAGAATGGAGAAAAGGT+TGG | - | chr2_1:16092536-16092555 | Msa0197780:three_prime_UTR | 45.0% | |
AATTCGTAGTCTCGTTCAGC+AGG | - | chr2_1:16092659-16092678 | Msa0197780:three_prime_UTR | 45.0% | |
AATACTATAGCGGTGTAGCG+TGG | - | chr2_1:16093106-16093125 | Msa0197780:CDS | 45.0% | |
TACTCTCAATGGCACTTTGC+GGG | + | chr2_1:16093161-16093180 | None:intergenic | 45.0% | |
CTACTCTCAATGGCACTTTG+CGG | + | chr2_1:16093162-16093181 | None:intergenic | 45.0% | |
GCAATAGTGGCCACTATAAG+CGG | - | chr2_1:16093184-16093203 | Msa0197780:CDS | 45.0% | |
CACTATAAGCGGTTGAAGAG+CGG | - | chr2_1:16093195-16093214 | Msa0197780:CDS | 45.0% | |
GAAGAACACAAGCAAGAGAC+TGG | - | chr2_1:16093435-16093454 | Msa0197780:intron | 45.0% | |
! | TTACAGCCGCTGTTTCATGT+CGG | - | chr2_1:16093498-16093517 | Msa0197780:intron | 45.0% |
AATTGGGCTTCACTCTTGCT+TGG | - | chr2_1:16093553-16093572 | Msa0197780:intron | 45.0% | |
TCTGCAGGCAATTCTCCATT+GGG | + | chr2_1:16093614-16093633 | None:intergenic | 45.0% | |
CACCAAACAGCTATAGTAGC+GGG | + | chr2_1:16093986-16094005 | None:intergenic | 45.0% | |
CCACCAAACAGCTATAGTAG+CGG | + | chr2_1:16093987-16094006 | None:intergenic | 45.0% | |
! | TGGCCGCTATTGCAATTTTG+AGG | - | chr2_1:16094004-16094023 | Msa0197780:intron | 45.0% |
! | GGCCGCTATTGCAATTTTGA+GGG | - | chr2_1:16094005-16094024 | Msa0197780:intron | 45.0% |
GTCAGACAAAGCAAAGGACT+TGG | - | chr2_1:16094216-16094235 | Msa0197780:CDS | 45.0% | |
AGTTAGCCAAAGATGTGCAG+GGG | + | chr2_1:16094669-16094688 | None:intergenic | 45.0% | |
CAGTTAGCCAAAGATGTGCA+GGG | + | chr2_1:16094670-16094689 | None:intergenic | 45.0% | |
GGCAGATCGTAAGGATGATT+TGG | - | chr2_1:16094784-16094803 | Msa0197780:intron | 45.0% | |
! | GTATCTAACGGCTGATTCAG+AGG | - | chr2_1:16094808-16094827 | Msa0197780:intron | 45.0% |
! | ATGGAGAAAGCACAAGAGCA+AGG | - | chr2_1:16094911-16094930 | Msa0197780:intron | 45.0% |
CAGCCCAAAGCAAAAACAAG+AGG | + | chr2_1:16095018-16095037 | None:intergenic | 45.0% | |
GAGAGAGAAAAAATGGAGGG+GGG | - | chr2_1:16095227-16095246 | Msa0197780:intron | 45.0% | |
GGTTGGAGAGTGATCCTATA+GGG | - | chr2_1:16095248-16095267 | Msa0197780:intron | 45.0% | |
GTTGGAGAGTGATCCTATAG+GGG | - | chr2_1:16095249-16095268 | Msa0197780:intron | 45.0% | |
AAAGAACCTACCGATGGATC+CGG | + | chr2_1:16095277-16095296 | None:intergenic | 45.0% | |
GAGCGACCCTTTATAGATGT+AGG | - | chr2_1:16095552-16095571 | Msa0197780:intron | 45.0% | |
TACTCAAGTTCCTGGAGACA+AGG | - | chr2_1:16095811-16095830 | Msa0197780:intron | 45.0% | |
ACTCAAGTTCCTGGAGACAA+GGG | - | chr2_1:16095812-16095831 | Msa0197780:intron | 45.0% | |
! | TTTTCCAATCCCTTGTCTCC+AGG | + | chr2_1:16095824-16095843 | None:intergenic | 45.0% |
!! | TCTTTGCTGTTATCCCTCAG+AGG | - | chr2_1:16095850-16095869 | Msa0197780:intron | 45.0% |
! | GCTTGTGATCTTTTCCTCTG+AGG | + | chr2_1:16095867-16095886 | None:intergenic | 45.0% |
TGAAGTGTAGAGCGTAGAAC+TGG | - | chr2_1:16096025-16096044 | Msa0197780:intron | 45.0% | |
GGGTAATTCCATCATAAGGG+AGG | + | chr2_1:16096185-16096204 | None:intergenic | 45.0% | |
CCAAAGAACAACGTTCCAAG+AGG | + | chr2_1:16096206-16096225 | None:intergenic | 45.0% | |
CCTCTTGGAACGTTGTTCTT+TGG | - | chr2_1:16096203-16096222 | Msa0197780:intron | 45.0% | |
! | TGTGGCTTTGCCACAACAAT+AGG | + | chr2_1:16096353-16096372 | None:intergenic | 45.0% |
! | CACTATTGAGCCTTGTAGAG+AGG | - | chr2_1:16096402-16096421 | Msa0197780:CDS | 45.0% |
GAACAATGGTCCTCTCTACA+AGG | + | chr2_1:16096415-16096434 | None:intergenic | 45.0% | |
! | AACAGTGGATTCGGGTTCGT+GGG | + | chr2_1:16092298-16092317 | None:intergenic | 50.0% |
!! | TGGTGGTGGAACAGTGGATT+CGG | + | chr2_1:16092307-16092326 | None:intergenic | 50.0% |
!! | AGTTCTGAAGTGGGTTGTGG+TGG | + | chr2_1:16092324-16092343 | None:intergenic | 50.0% |
!! | GAGAGTTCTGAAGTGGGTTG+TGG | + | chr2_1:16092327-16092346 | None:intergenic | 50.0% |
TAGCTTCTTCTCCGCGTTCT+TGG | + | chr2_1:16092349-16092368 | None:intergenic | 50.0% | |
GAAAGCAGAGAAGAAAGCGG+CGG | - | chr2_1:16092395-16092414 | Msa0197780:three_prime_UTR | 50.0% | |
! | AAGTATAGCGGGGATAACGG+AGG | - | chr2_1:16092470-16092489 | Msa0197780:three_prime_UTR | 50.0% |
AACGGAGGAAGAGAGAGTGA+AGG | - | chr2_1:16092485-16092504 | Msa0197780:three_prime_UTR | 50.0% | |
AATGGCACTTTGCGGGACTA+TGG | + | chr2_1:16093154-16093173 | None:intergenic | 50.0% | |
CGCTCTTCAACCGCTTATAG+TGG | + | chr2_1:16093197-16093216 | None:intergenic | 50.0% | |
!! | GTTGAAGAGCGGTGCTATCA+TGG | - | chr2_1:16093206-16093225 | Msa0197780:CDS | 50.0% |
!! | ACATAATTCGCTGGGTTGGC+CGG | - | chr2_1:16093248-16093267 | Msa0197780:intron | 50.0% |
!! | TACGCCAAAGTACCGCGAAT+CGG | + | chr2_1:16093299-16093318 | None:intergenic | 50.0% |
AGTACCCGCTGAAATTCGTG+AGG | - | chr2_1:16093368-16093387 | Msa0197780:intron | 50.0% | |
GTACCCGCTGAAATTCGTGA+GGG | - | chr2_1:16093369-16093388 | Msa0197780:intron | 50.0% | |
TACCCGCTGAAATTCGTGAG+GGG | - | chr2_1:16093370-16093389 | Msa0197780:intron | 50.0% | |
CCTCATCCGACATGAAACAG+CGG | + | chr2_1:16093507-16093526 | None:intergenic | 50.0% | |
CTTTGCTCAACTTGGCCCAA+TGG | - | chr2_1:16093596-16093615 | Msa0197780:intron | 50.0% | |
CTCTGCAGGCAATTCTCCAT+TGG | + | chr2_1:16093615-16093634 | None:intergenic | 50.0% | |
TTCGTTCTGGTATGCGGTAC+CGG | + | chr2_1:16093941-16093960 | None:intergenic | 50.0% | |
GTCCCGCTACTATAGCTGTT+TGG | - | chr2_1:16093981-16094000 | Msa0197780:intron | 50.0% | |
CCGCTACTATAGCTGTTTGG+TGG | - | chr2_1:16093984-16094003 | Msa0197780:intron | 50.0% | |
GTGATACCCCTGCACATCTT+TGG | - | chr2_1:16094660-16094679 | Msa0197780:intron | 50.0% | |
CCAGTTAGCCAAAGATGTGC+AGG | + | chr2_1:16094671-16094690 | None:intergenic | 50.0% | |
CCTGCACATCTTTGGCTAAC+TGG | - | chr2_1:16094668-16094687 | Msa0197780:intron | 50.0% | |
ACTTGTGTTTCCAGCTGCAG+TGG | + | chr2_1:16095150-16095169 | None:intergenic | 50.0% | |
GAGAAAAAATGGAGGGGGGT+TGG | - | chr2_1:16095231-16095250 | Msa0197780:intron | 50.0% | |
GGGTTGGAGAGTGATCCTAT+AGG | - | chr2_1:16095247-16095266 | Msa0197780:intron | 50.0% | |
GAGTGATCCTATAGGGGATC+CGG | - | chr2_1:16095255-16095274 | Msa0197780:intron | 50.0% | |
TATAGGGGATCCGGATCCAT+CGG | - | chr2_1:16095264-16095283 | Msa0197780:intron | 50.0% | |
AGTTCCTGGAGACAAGGGAT+TGG | - | chr2_1:16095817-16095836 | Msa0197780:intron | 50.0% | |
! | TTGTGACCGGATTTTCTGCG+AGG | - | chr2_1:16096154-16096173 | Msa0197780:intron | 50.0% |
GTCACACCTCGCAGAAAATC+CGG | + | chr2_1:16096163-16096182 | None:intergenic | 50.0% | |
AGGTGTGACCTCCCTTATGA+TGG | - | chr2_1:16096174-16096193 | Msa0197780:intron | 50.0% | |
TGTTTGCTTGCGCACACCAA+GGG | + | chr2_1:16096280-16096299 | None:intergenic | 50.0% | |
ATGTTTGCTTGCGCACACCA+AGG | + | chr2_1:16096281-16096300 | None:intergenic | 50.0% | |
! | GAACAGTGGATTCGGGTTCG+TGG | + | chr2_1:16092299-16092318 | None:intergenic | 55.0% |
!! | GGTGGTGGAACAGTGGATTC+GGG | + | chr2_1:16092306-16092325 | None:intergenic | 55.0% |
!! | TCTGAAGTGGGTTGTGGTGG+TGG | + | chr2_1:16092321-16092340 | None:intergenic | 55.0% |
GGCGAAGGAGCAGAAGAAGA+AGG | - | chr2_1:16092416-16092435 | Msa0197780:three_prime_UTR | 55.0% | |
GGACTATGGCGTAGTAGTGG+AGG | + | chr2_1:16093140-16093159 | None:intergenic | 55.0% | |
GGTTCGCACGAACCAATTCG+CGG | + | chr2_1:16093278-16093297 | None:intergenic | 55.0% | |
!! | CGAACCGATTCGCGGTACTT+TGG | - | chr2_1:16093292-16093311 | Msa0197780:intron | 55.0% |
ACCCGCTGAAATTCGTGAGG+GGG | - | chr2_1:16093371-16093390 | Msa0197780:intron | 55.0% | |
TCCCCCTCACGAATTTCAGC+GGG | + | chr2_1:16093375-16093394 | None:intergenic | 55.0% | |
CTCCCCCTCACGAATTTCAG+CGG | + | chr2_1:16093376-16093395 | None:intergenic | 55.0% | |
! | CCGCTGTTTCATGTCGGATG+AGG | - | chr2_1:16093504-16093523 | Msa0197780:intron | 55.0% |
!! | TCTGGTATGCGGTACCGGTA+CGG | + | chr2_1:16093936-16093955 | None:intergenic | 55.0% |
CTTTGGCTAACTGGCTGCGA+AGG | - | chr2_1:16094677-16094696 | Msa0197780:intron | 55.0% | |
AACTGGCTGCGAAGGAGAGA+TGG | - | chr2_1:16094685-16094704 | Msa0197780:intron | 55.0% | |
GATGGATCCGGATCCCCTAT+AGG | + | chr2_1:16095265-16095284 | None:intergenic | 55.0% | |
! | GTGGATTCGGGTTCGTGGGA+TGG | + | chr2_1:16092294-16092313 | None:intergenic | 60.0% |
!! | GGGTTGTGGTGGTGGAACAG+TGG | + | chr2_1:16092313-16092332 | None:intergenic | 60.0% |
AGAGAAGAAAGCGGCGGCGA+AGG | - | chr2_1:16092401-16092420 | Msa0197780:three_prime_UTR | 60.0% | |
GCGGGACTATGGCGTAGTAG+TGG | + | chr2_1:16093143-16093162 | None:intergenic | 60.0% | |
CGAACCAATTCGCGGTTCGC+CGG | + | chr2_1:16093270-16093289 | None:intergenic | 60.0% | |
!! | GGTTCGTGCGAACCGATTCG+CGG | - | chr2_1:16093284-16093303 | Msa0197780:intron | 60.0% |
!! | CTGGTATGCGGTACCGGTAC+GGG | + | chr2_1:16093935-16093954 | None:intergenic | 60.0% |
!! | GGAAGTGCTTCCACTGCAGC+TGG | - | chr2_1:16095137-16095156 | Msa0197780:intron | 60.0% |
TTGGCCGGCGAACCGCGAAT+TGG | - | chr2_1:16093263-16093282 | Msa0197780:intron | 65.0% | |
AGCGTACCGCGAACCCGTAC+CGG | - | chr2_1:16093919-16093938 | Msa0197780:intron | 65.0% | |
GGGGATCCGGATCCATCGGT+AGG | - | chr2_1:16095268-16095287 | Msa0197780:intron | 65.0% | |
AGCGGTGTAGCGTGGCAGCG+CGG | - | chr2_1:16093114-16093133 | Msa0197780:CDS | 70.0% | |
!! | GCGGTACCGGTACGGGTTCG+CGG | + | chr2_1:16093928-16093947 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_1 | gene | 16092222 | 16096824 | 16092222 | ID=Msa0197780;Name=Msa0197780 |
chr2_1 | mRNA | 16092222 | 16096824 | 16092222 | ID=Msa0197780-mRNA-1;Parent=Msa0197780;Name=Msa0197780-mRNA-1;_AED=0.04;_eAED=0.04;_QI=63|1|1|1|0|1|3|790|336 |
chr2_1 | exon | 16092222 | 16093266 | 16092222 | ID=Msa0197780-mRNA-1:exon:6719;Parent=Msa0197780-mRNA-1 |
chr2_1 | exon | 16094058 | 16094417 | 16094058 | ID=Msa0197780-mRNA-1:exon:6718;Parent=Msa0197780-mRNA-1 |
chr2_1 | exon | 16096366 | 16096824 | 16096366 | ID=Msa0197780-mRNA-1:exon:6717;Parent=Msa0197780-mRNA-1 |
chr2_1 | five_prime_UTR | 16096762 | 16096824 | 16096762 | ID=Msa0197780-mRNA-1:five_prime_utr;Parent=Msa0197780-mRNA-1 |
chr2_1 | CDS | 16096366 | 16096761 | 16096366 | ID=Msa0197780-mRNA-1:cds;Parent=Msa0197780-mRNA-1 |
chr2_1 | CDS | 16094058 | 16094417 | 16094058 | ID=Msa0197780-mRNA-1:cds;Parent=Msa0197780-mRNA-1 |
chr2_1 | CDS | 16093012 | 16093266 | 16093012 | ID=Msa0197780-mRNA-1:cds;Parent=Msa0197780-mRNA-1 |
chr2_1 | three_prime_UTR | 16092222 | 16093011 | 16092222 | ID=Msa0197780-mRNA-1:three_prime_utr;Parent=Msa0197780-mRNA-1 |
Gene Sequence |
Protein sequence |