Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186200 | CAB65283.1 | 99.145 | 117 | 1 | 0 | 1 | 117 | 1 | 117 | 1.57e-78 | 236 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186200 | sp|Q02921|NO93_SOYBN | 58.025 | 81 | 34 | 0 | 27 | 107 | 17 | 97 | 3.19e-21 | 84.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186200 | Q9SBR6 | 99.145 | 117 | 1 | 0 | 1 | 117 | 1 | 117 | 7.50e-79 | 236 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011060 | Msa0186200 | -0.802204 | 6.268581e-49 | -8.615850e-47 |
| Msa0011100 | Msa0186200 | -0.800658 | 1.299885e-48 | -8.615850e-47 |
| Msa0021240 | Msa0186200 | -0.802750 | 4.836980e-49 | -8.615850e-47 |
| Msa0021400 | Msa0186200 | 0.836342 | 9.898385e-57 | -8.615850e-47 |
| Msa0024950 | Msa0186200 | 0.804685 | 1.918074e-49 | -8.615850e-47 |
| Msa0025570 | Msa0186200 | 0.803974 | 2.698516e-49 | -8.615850e-47 |
| Msa0029700 | Msa0186200 | 0.816713 | 4.799199e-52 | -8.615850e-47 |
| Msa0034100 | Msa0186200 | -0.819309 | 1.242686e-52 | -8.615850e-47 |
| Msa0036550 | Msa0186200 | 0.810640 | 1.042396e-50 | -8.615850e-47 |
| Msa0038010 | Msa0186200 | 0.820707 | 5.949511e-53 | -8.615850e-47 |
| Msa0046430 | Msa0186200 | 0.818558 | 1.841428e-52 | -8.615850e-47 |
| Msa0048410 | Msa0186200 | -0.815284 | 1.000504e-51 | -8.615850e-47 |
| Msa0054860 | Msa0186200 | 0.822020 | 2.961589e-53 | -8.615850e-47 |
| Msa0059880 | Msa0186200 | 0.801391 | 9.207141e-49 | -8.615850e-47 |
| Msa0064960 | Msa0186200 | 0.848559 | 5.673161e-60 | -8.615850e-47 |
| Msa0064990 | Msa0186200 | 0.815867 | 7.419689e-52 | -8.615850e-47 |
| Msa0072440 | Msa0186200 | 0.805162 | 1.524950e-49 | -8.615850e-47 |
| Msa0073110 | Msa0186200 | 0.803742 | 3.015251e-49 | -8.615850e-47 |
| Msa0080020 | Msa0186200 | 0.807455 | 5.012863e-50 | -8.615850e-47 |
| Msa0084190 | Msa0186200 | 0.803839 | 2.877730e-49 | -8.615850e-47 |
| Msa0085710 | Msa0186200 | 0.806040 | 9.975595e-50 | -8.615850e-47 |
| Msa0090190 | Msa0186200 | 0.824501 | 7.799759e-54 | -8.615850e-47 |
| Msa0100200 | Msa0186200 | 0.817368 | 3.419887e-52 | -8.615850e-47 |
| Msa0110240 | Msa0186200 | 0.859809 | 3.198298e-63 | -8.615850e-47 |
| Msa0113910 | Msa0186200 | -0.801632 | 8.217753e-49 | -8.615850e-47 |
| Msa0120860 | Msa0186200 | 0.831504 | 1.607504e-55 | -8.615850e-47 |
| Msa0121320 | Msa0186200 | 0.828616 | 8.143515e-55 | -8.615850e-47 |
| Msa0124960 | Msa0186200 | 0.801889 | 7.274876e-49 | -8.615850e-47 |
| Msa0128110 | Msa0186200 | -0.810058 | 1.392287e-50 | -8.615850e-47 |
| Msa0128340 | Msa0186200 | 0.821152 | 4.699500e-53 | -8.615850e-47 |
| Msa0128740 | Msa0186200 | 0.827436 | 1.566017e-54 | -8.615850e-47 |
| Msa0131460 | Msa0186200 | 0.800847 | 1.189319e-48 | -8.615850e-47 |
| Msa0132250 | Msa0186200 | 0.808279 | 3.348129e-50 | -8.615850e-47 |
| Msa0137760 | Msa0186200 | 0.834729 | 2.532883e-56 | -8.615850e-47 |
| Msa0140870 | Msa0186200 | -0.800756 | 1.241566e-48 | -8.615850e-47 |
| Msa0144000 | Msa0186200 | 0.803010 | 4.273977e-49 | -8.615850e-47 |
| Msa0154730 | Msa0186200 | 0.807178 | 5.738016e-50 | -8.615850e-47 |
| Msa0155850 | Msa0186200 | 0.818439 | 1.959287e-52 | -8.615850e-47 |
| Msa0156530 | Msa0186200 | 0.830231 | 3.299656e-55 | -8.615850e-47 |
| Msa0163690 | Msa0186200 | 0.807450 | 5.026146e-50 | -8.615850e-47 |
| Msa0166180 | Msa0186200 | 0.822905 | 1.844120e-53 | -8.615850e-47 |
| Msa0175060 | Msa0186200 | 0.806834 | 6.786055e-50 | -8.615850e-47 |
| Msa0177260 | Msa0186200 | 0.802326 | 5.916160e-49 | -8.615850e-47 |
| Msa0177550 | Msa0186200 | 0.819065 | 1.412235e-52 | -8.615850e-47 |
| Msa0182840 | Msa0186200 | 0.808265 | 3.372372e-50 | -8.615850e-47 |
| Msa0183920 | Msa0186200 | 0.807505 | 4.893002e-50 | -8.615850e-47 |
| Msa0186200 | Msa0186400 | -0.800664 | 1.296417e-48 | -8.615850e-47 |
| Msa0186200 | Msa0189150 | -0.829169 | 5.984194e-55 | -8.615850e-47 |
| Msa0186200 | Msa0196280 | 0.803142 | 4.013501e-49 | -8.615850e-47 |
| Msa0186200 | Msa0210790 | 0.808371 | 3.201449e-50 | -8.615850e-47 |
| Msa0186200 | Msa0210850 | 0.801836 | 7.459774e-49 | -8.615850e-47 |
| Msa0186200 | Msa0214800 | 0.801592 | 8.371390e-49 | -8.615850e-47 |
| Msa0186200 | Msa0232660 | -0.803954 | 2.723709e-49 | -8.615850e-47 |
| Msa0186200 | Msa0238140 | 0.826365 | 2.824056e-54 | -8.615850e-47 |
| Msa0186200 | Msa0242720 | 0.810525 | 1.104080e-50 | -8.615850e-47 |
| Msa0186200 | Msa0248320 | 0.817916 | 2.572233e-52 | -8.615850e-47 |
| Msa0186200 | Msa0258280 | -0.806463 | 8.127720e-50 | -8.615850e-47 |
| Msa0186200 | Msa0258740 | 0.803836 | 2.881750e-49 | -8.615850e-47 |
| Msa0186200 | Msa0259110 | 0.800095 | 1.692382e-48 | -8.615850e-47 |
| Msa0186200 | Msa0266140 | -0.806593 | 7.629556e-50 | -8.615850e-47 |
| Msa0186200 | Msa0270730 | -0.806335 | 8.647379e-50 | -8.615850e-47 |
| Msa0186200 | Msa0274250 | 0.802986 | 4.324303e-49 | -8.615850e-47 |
| Msa0186200 | Msa0274260 | 0.820396 | 7.011091e-53 | -8.615850e-47 |
| Msa0186200 | Msa0276580 | 0.800848 | 1.188609e-48 | -8.615850e-47 |
| Msa0186200 | Msa0276780 | 0.808943 | 2.415749e-50 | -8.615850e-47 |
| Msa0186200 | Msa0294200 | 0.808819 | 2.567347e-50 | -8.615850e-47 |
| Msa0186200 | Msa0297320 | -0.801520 | 8.660849e-49 | -8.615850e-47 |
| Msa0186200 | Msa0303650 | 0.805940 | 1.047467e-49 | -8.615850e-47 |
| Msa0186200 | Msa0303900 | 0.803365 | 3.609614e-49 | -8.615850e-47 |
| Msa0186200 | Msa0304060 | -0.804182 | 2.441888e-49 | -8.615850e-47 |
| Msa0186200 | Msa0308740 | 0.800781 | 1.226635e-48 | -8.615850e-47 |
| Msa0186200 | Msa0318360 | 0.817068 | 3.994066e-52 | -8.615850e-47 |
| Msa0186200 | Msa0343230 | -0.808695 | 2.729461e-50 | -8.615850e-47 |
| Msa0186200 | Msa0347320 | 0.802809 | 4.703159e-49 | -8.615850e-47 |
| Msa0186200 | Msa0358470 | 0.808392 | 3.168430e-50 | -8.615850e-47 |
| Msa0186200 | Msa0372100 | 0.802928 | 4.443909e-49 | -8.615850e-47 |
| Msa0186200 | Msa0375500 | 0.805238 | 1.470203e-49 | -8.615850e-47 |
| Msa0186200 | Msa0375550 | 0.821865 | 3.216726e-53 | -8.615850e-47 |
| Msa0186200 | Msa0378530 | -0.808642 | 2.801686e-50 | -8.615850e-47 |
| Msa0186200 | Msa0422230 | -0.806470 | 8.097839e-50 | -8.615850e-47 |
| Msa0186200 | Msa0433090 | 0.806838 | 6.772615e-50 | -8.615850e-47 |
| Msa0186200 | Msa0434140 | 0.806274 | 8.905722e-50 | -8.615850e-47 |
| Msa0186200 | Msa0444200 | 0.802883 | 4.540054e-49 | -8.615850e-47 |
| Msa0186200 | Msa0444210 | 0.807831 | 4.171520e-50 | -8.615850e-47 |
| Msa0186200 | Msa0489370 | 0.815155 | 1.068387e-51 | -8.615850e-47 |
| Msa0186200 | Msa0497680 | 0.800038 | 1.738581e-48 | -8.615850e-47 |
| Msa0186200 | Msa0511380 | 0.809538 | 1.800525e-50 | -8.615850e-47 |
| Msa0186200 | Msa0514540 | 0.806109 | 9.650227e-50 | -8.615850e-47 |
| Msa0186200 | Msa0522280 | 0.969231 | 8.073482e-130 | -8.615850e-47 |
| Msa0186200 | Msa0538050 | -0.816342 | 5.809207e-52 | -8.615850e-47 |
| Msa0186200 | Msa0538450 | 0.813562 | 2.403662e-51 | -8.615850e-47 |
| Msa0186200 | Msa0538520 | 0.818512 | 1.886270e-52 | -8.615850e-47 |
| Msa0186200 | Msa0538650 | 0.820457 | 6.791122e-53 | -8.615850e-47 |
| Msa0186200 | Msa0548420 | 0.819643 | 1.043058e-52 | -8.615850e-47 |
| Msa0186200 | Msa0566460 | 0.804634 | 1.965694e-49 | -8.615850e-47 |
| Msa0186200 | Msa0575950 | 0.828176 | 1.039859e-54 | -8.615850e-47 |
| Msa0186200 | Msa0576480 | -0.800713 | 1.266892e-48 | -8.615850e-47 |
| Msa0186200 | Msa0585720 | -0.800996 | 1.108978e-48 | -8.615850e-47 |
| Msa0186200 | Msa0587730 | 0.800793 | 1.219816e-48 | -8.615850e-47 |
| Msa0186200 | Msa0588040 | 0.809437 | 1.892773e-50 | -8.615850e-47 |
| Msa0186200 | Msa0597820 | 0.808661 | 2.775839e-50 | -8.615850e-47 |
| Msa0186200 | Msa0601400 | 0.802274 | 6.062787e-49 | -8.615850e-47 |
| Msa0186200 | Msa0603310 | 0.800368 | 1.489451e-48 | -8.615850e-47 |
| Msa0186200 | Msa0612880 | -0.803146 | 4.006197e-49 | -8.615850e-47 |
| Msa0186200 | Msa0614020 | -0.806448 | 8.187808e-50 | -8.615850e-47 |
| Msa0186200 | Msa0619690 | -0.810618 | 1.054154e-50 | -8.615850e-47 |
| Msa0186200 | Msa0623980 | 0.804019 | 2.640639e-49 | -8.615850e-47 |
| Msa0186200 | Msa0644340 | 0.811258 | 7.658242e-51 | -8.615850e-47 |
| Msa0186200 | Msa0647300 | 0.807618 | 4.628089e-50 | -8.615850e-47 |
| Msa0186200 | Msa0651820 | 0.812991 | 3.208277e-51 | -8.615850e-47 |
| Msa0186200 | Msa0654500 | -0.800748 | 1.245999e-48 | -8.615850e-47 |
| Msa0186200 | Msa0680460 | 0.805137 | 1.543499e-49 | -8.615850e-47 |
| Msa0186200 | Msa0685390 | -0.807057 | 6.087693e-50 | -8.615850e-47 |
| Msa0186200 | Msa0686830 | 0.810694 | 1.014868e-50 | -8.615850e-47 |
| Msa0186200 | Msa0689840 | 0.831251 | 1.856232e-55 | -8.615850e-47 |
| Msa0186200 | Msa0706130 | -0.804146 | 2.485161e-49 | -8.615850e-47 |
| Msa0186200 | Msa0707860 | -0.812005 | 5.268551e-51 | -8.615850e-47 |
| Msa0186200 | Msa0708680 | 0.813922 | 2.002300e-51 | -8.615850e-47 |
| Msa0186200 | Msa0711240 | 0.831966 | 1.237226e-55 | -8.615850e-47 |
| Msa0186200 | Msa0716700 | 0.809358 | 1.968863e-50 | -8.615850e-47 |
| Msa0186200 | Msa0735340 | 0.828023 | 1.132056e-54 | -8.615850e-47 |
| Msa0186200 | Msa0750830 | 0.813582 | 2.379149e-51 | -8.615850e-47 |
| Msa0186200 | Msa0756670 | -0.825840 | 3.763156e-54 | -8.615850e-47 |
| Msa0186200 | Msa0761830 | 0.810829 | 9.488703e-51 | -8.615850e-47 |
| Msa0186200 | Msa0772420 | 0.807297 | 5.415757e-50 | -8.615850e-47 |
| Msa0186200 | Msa0777210 | 0.823222 | 1.556083e-53 | -8.615850e-47 |
| Msa0186200 | Msa0797980 | -0.815873 | 7.393978e-52 | -8.615850e-47 |
| Msa0186200 | Msa0799120 | 0.806899 | 6.574719e-50 | -8.615850e-47 |
| Msa0186200 | Msa0814350 | 0.842795 | 2.078438e-58 | -8.615850e-47 |
| Msa0186200 | Msa0829770 | -0.804863 | 1.761062e-49 | -8.615850e-47 |
| Msa0186200 | Msa0836060 | -0.819636 | 1.046402e-52 | -8.615850e-47 |
| Msa0186200 | Msa0841670 | 0.802164 | 6.387279e-49 | -8.615850e-47 |
| Msa0186200 | Msa0847140 | 0.809161 | 2.169063e-50 | -8.615850e-47 |
| Msa0186200 | Msa0854840 | 0.802899 | 4.506561e-49 | -8.615850e-47 |
| Msa0186200 | Msa0871420 | 0.808752 | 2.653838e-50 | -8.615850e-47 |
| Msa0186200 | Msa0874750 | 0.821562 | 3.779721e-53 | -8.615850e-47 |
| Msa0186200 | Msa0886370 | 0.802041 | 6.772577e-49 | -8.615850e-47 |
| Msa0186200 | Msa0902340 | 0.810902 | 9.149246e-51 | -8.615850e-47 |
| Msa0186200 | Msa0904590 | 0.803192 | 3.919087e-49 | -8.615850e-47 |
| Msa0186200 | Msa0921860 | 0.833289 | 5.808159e-56 | -8.615850e-47 |
| Msa0186200 | Msa0936630 | 0.827227 | 1.757712e-54 | -8.615850e-47 |
| Msa0186200 | Msa0947420 | 0.806654 | 7.406082e-50 | -8.615850e-47 |
| Msa0186200 | Msa0958830 | 0.806727 | 7.149247e-50 | -8.615850e-47 |
| Msa0186200 | Msa0967900 | -0.800452 | 1.431451e-48 | -8.615850e-47 |
| Msa0186200 | Msa0976400 | 0.805976 | 1.028983e-49 | -8.615850e-47 |
| Msa0186200 | Msa1005370 | 0.806429 | 8.263119e-50 | -8.615850e-47 |
| Msa0186200 | Msa1011140 | -0.808725 | 2.689018e-50 | -8.615850e-47 |
| Msa0186200 | Msa1026490 | 0.824387 | 8.297909e-54 | -8.615850e-47 |
| Msa0186200 | Msa1026970 | 0.812129 | 4.950915e-51 | -8.615850e-47 |
| Msa0186200 | Msa1036590 | 0.807779 | 4.279407e-50 | -8.615850e-47 |
| Msa0186200 | Msa1039150 | -0.810767 | 9.787066e-51 | -8.615850e-47 |
| Msa0186200 | Msa1053340 | 0.820251 | 7.571557e-53 | -8.615850e-47 |
| Msa0186200 | Msa1061840 | 0.810646 | 1.039463e-50 | -8.615850e-47 |
| Msa0186200 | Msa1064940 | 0.804694 | 1.909795e-49 | -8.615850e-47 |
| Msa0186200 | Msa1074560 | 0.840086 | 1.074568e-57 | -8.615850e-47 |
| Msa0186200 | Msa1076900 | 0.807548 | 4.789051e-50 | -8.615850e-47 |
| Msa0186200 | Msa1082080 | 0.808407 | 3.145305e-50 | -8.615850e-47 |
| Msa0186200 | Msa1083660 | -0.806025 | 1.004829e-49 | -8.615850e-47 |
| Msa0186200 | Msa1085560 | 0.824000 | 1.022986e-53 | -8.615850e-47 |
| Msa0186200 | Msa1085820 | 0.820032 | 8.498052e-53 | -8.615850e-47 |
| Msa0186200 | Msa1087380 | 0.818755 | 1.661201e-52 | -8.615850e-47 |
| Msa0186200 | Msa1111650 | 0.811478 | 6.862897e-51 | -8.615850e-47 |
| Msa0186200 | Msa1111900 | 0.802939 | 4.422578e-49 | -8.615850e-47 |
| Msa0186200 | Msa1124220 | 0.809148 | 2.183005e-50 | -8.615850e-47 |
| Msa0186200 | Msa1138110 | 0.812542 | 4.024079e-51 | -8.615850e-47 |
| Msa0186200 | Msa1142590 | 0.815511 | 8.906023e-52 | -8.615850e-47 |
| Msa0186200 | Msa1142600 | 0.809910 | 1.497720e-50 | -8.615850e-47 |
| Msa0186200 | Msa1143060 | -0.806828 | 6.805207e-50 | -8.615850e-47 |
| Msa0186200 | Msa1146980 | 0.840889 | 6.625722e-58 | -8.615850e-47 |
| Msa0186200 | Msa1154310 | 0.818212 | 2.205385e-52 | -8.615850e-47 |
| Msa0186200 | Msa1163710 | 0.801576 | 8.434951e-49 | -8.615850e-47 |
| Msa0186200 | Msa1186670 | 0.807820 | 4.192849e-50 | -8.615850e-47 |
| Msa0186200 | Msa1191350 | 0.812017 | 5.239502e-51 | -8.615850e-47 |
| Msa0186200 | Msa1197720 | 0.806565 | 7.734782e-50 | -8.615850e-47 |
| Msa0186200 | Msa1200360 | 0.814402 | 1.569030e-51 | -8.615850e-47 |
| Msa0186200 | Msa1204900 | -0.803205 | 3.895101e-49 | -8.615850e-47 |
| Msa0186200 | Msa1207660 | -0.809614 | 1.734511e-50 | -8.615850e-47 |
| Msa0186200 | Msa1207770 | -0.803756 | 2.994171e-49 | -8.615850e-47 |
| Msa0186200 | Msa1214960 | 0.822491 | 2.302861e-53 | -8.615850e-47 |
| Msa0186200 | Msa1219530 | -0.808584 | 2.882958e-50 | -8.615850e-47 |
| Msa0186200 | Msa1223710 | 0.816075 | 6.667722e-52 | -8.615850e-47 |
| Msa0186200 | Msa1225240 | -0.802705 | 4.942723e-49 | -8.615850e-47 |
| Msa0186200 | Msa1238250 | 0.803687 | 3.095830e-49 | -8.615850e-47 |
| Msa0186200 | Msa1251500 | 0.812047 | 5.161070e-51 | -8.615850e-47 |
| Msa0186200 | Msa1259560 | 0.805618 | 1.223531e-49 | -8.615850e-47 |
| Msa0186200 | Msa1269200 | 0.814337 | 1.621847e-51 | -8.615850e-47 |
| Msa0186200 | Msa1273320 | 0.801940 | 7.101260e-49 | -8.615850e-47 |
| Msa0186200 | Msa1302630 | 0.817872 | 2.632156e-52 | -8.615850e-47 |
| Msa0186200 | Msa1317740 | 0.800193 | 1.616363e-48 | -8.615850e-47 |
| Msa0186200 | Msa1319030 | 0.814798 | 1.282592e-51 | -8.615850e-47 |
| Msa0186200 | Msa1319190 | 0.813717 | 2.222148e-51 | -8.615850e-47 |
| Msa0186200 | Msa1323030 | 0.803112 | 4.071878e-49 | -8.615850e-47 |
| Msa0186200 | Msa1331530 | -0.801645 | 8.163965e-49 | -8.615850e-47 |
| Msa0186200 | Msa1344930 | 0.802862 | 4.585666e-49 | -8.615850e-47 |
| Msa0186200 | Msa1345390 | 0.818295 | 2.111705e-52 | -8.615850e-47 |
| Msa0186200 | Msa1357840 | 0.807369 | 5.227338e-50 | -8.615850e-47 |
| Msa0186200 | Msa1359520 | 0.824640 | 7.234334e-54 | -8.615850e-47 |
| Msa0186200 | Msa1360070 | -0.806259 | 8.971490e-50 | -8.615850e-47 |
| Msa0186200 | Msa1361580 | -0.812966 | 3.248875e-51 | -8.615850e-47 |
| Msa0186200 | Msa1362520 | 0.820034 | 8.488899e-53 | -8.615850e-47 |
| Msa0186200 | Msa1371540 | -0.805135 | 1.544583e-49 | -8.615850e-47 |
| Msa0186200 | Msa1373560 | 0.813735 | 2.202501e-51 | -8.615850e-47 |
| Msa0186200 | Msa1375640 | 0.832930 | 7.134802e-56 | -8.615850e-47 |
| Msa0186200 | Msa1376520 | 0.801495 | 8.764798e-49 | -8.615850e-47 |
| Msa0186200 | Msa1377460 | 0.812899 | 3.361083e-51 | -8.615850e-47 |
| Msa0186200 | Msa1381300 | -0.810798 | 9.634206e-51 | -8.615850e-47 |
| Msa0186200 | Msa1395720 | 0.806367 | 8.513397e-50 | -8.615850e-47 |
| Msa0186200 | Msa1400290 | -0.813326 | 2.708234e-51 | -8.615850e-47 |
| Msa0186200 | Msa1407040 | 0.812770 | 3.587490e-51 | -8.615850e-47 |
| Msa0186200 | Msa1409060 | 0.815276 | 1.004636e-51 | -8.615850e-47 |
| Msa0186200 | Msa1409360 | -0.809027 | 2.317232e-50 | -8.615850e-47 |
| Msa0186200 | Msa1426690 | -0.807450 | 5.025259e-50 | -8.615850e-47 |
| Msa0186200 | Msa1429810 | 0.821811 | 3.310668e-53 | -8.615850e-47 |
| Msa0186200 | Msa1433060 | -0.811111 | 8.245198e-51 | -8.615850e-47 |
| Msa0186200 | Msa1434300 | 0.821748 | 3.422761e-53 | -8.615850e-47 |
| Msa0186200 | Msa1434700 | 0.827618 | 1.416111e-54 | -8.615850e-47 |
| Msa0186200 | Msa1462210 | -0.804270 | 2.341900e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186200 | MtrunA17_Chr3g0140601 | 95.726 | 117 | 5 | 0 | 1 | 117 | 1 | 117 | 3.75e-78 | 226 |
| Msa0186200 | MtrunA17_Chr1g0146471 | 70.085 | 117 | 33 | 2 | 1 | 117 | 1 | 115 | 7.78e-58 | 174 |
| Msa0186200 | MtrunA17_Chr4g0063331 | 56.790 | 81 | 35 | 0 | 27 | 107 | 21 | 101 | 2.34e-24 | 89.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186200 | AT5G25940.1 | 57.955 | 88 | 37 | 0 | 19 | 106 | 16 | 103 | 2.47e-21 | 82.4 |
Find 26 sgRNAs with CRISPR-Local
Find 112 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCTGCTGACAAAACAATCT+TGG | 0.341283 | 2_1:+912051 | Msa0186200:CDS |
| TCAGAGACTCTTCTAGCAGC+AGG | 0.453559 | 2_1:-912093 | None:intergenic |
| TTGCAGTTCGGATGATTCCA+TGG | 0.467990 | 2_1:+911544 | Msa0186200:CDS |
| AACATCTTCTGCTCTTCTGC+GGG | 0.476450 | 2_1:-910911 | None:intergenic |
| AGGTGTGCGTGCTGGATTCA+AGG | 0.476456 | 2_1:+911228 | Msa0186200:CDS |
| GGATTCAAGGCAGCCGGCAT+CGG | 0.492095 | 2_1:+911241 | Msa0186200:CDS |
| ATTCACAGTTGGTTGCAGTT+CGG | 0.494528 | 2_1:+911532 | Msa0186200:intron |
| AAACCTCAATTATACTGCTC+AGG | 0.499730 | 2_1:+911575 | Msa0186200:CDS |
| CGTGCTGGATTCAAGGCAGC+CGG | 0.500054 | 2_1:+911235 | Msa0186200:CDS |
| CACATGTCCCTCAGTTCTGA+TGG | 0.505127 | 2_1:-910851 | None:intergenic |
| TTGAGGTTTGCCTTTGCCCA+TGG | 0.506394 | 2_1:-911561 | None:intergenic |
| CAACATCTTCTGCTCTTCTG+CGG | 0.519948 | 2_1:-910912 | None:intergenic |
| AGGTCTAGTCAATGTACAGC+TGG | 0.529239 | 2_1:+910935 | Msa0186200:CDS |
| CAGGCGCTTATCATATCTGC+CGG | 0.532856 | 2_1:+911594 | Msa0186200:CDS |
| TATGCAGAAGGTGTGCGTGC+TGG | 0.539033 | 2_1:+911220 | Msa0186200:intron |
| GCGCCTGAGCAGTATAATTG+AGG | 0.541209 | 2_1:-911578 | None:intergenic |
| GGCAGCCGGCATCGGATGTG+TGG | 0.545487 | 2_1:+911249 | Msa0186200:CDS |
| CAGAGACTCTTCTAGCAGCA+GGG | 0.568654 | 2_1:-912092 | None:intergenic |
| ACTCGCCACACATCCGATGC+CGG | 0.574386 | 2_1:-911254 | None:intergenic |
| TGCAGTTCGGATGATTCCAT+GGG | 0.575792 | 2_1:+911545 | Msa0186200:CDS |
| CATCAGAACTGAGGGACATG+TGG | 0.592369 | 2_1:+910852 | Msa0186200:CDS |
| GGGAATTCCATCAGAACTGA+GGG | 0.594629 | 2_1:+910844 | Msa0186200:CDS |
| CAGAAGAGCAGAAGATGTTG+AGG | 0.594698 | 2_1:+910915 | Msa0186200:CDS |
| TCGGATGATTCCATGGGCAA+AGG | 0.603271 | 2_1:+911551 | Msa0186200:CDS |
| AAGATTACGTACAGTAGGCA+CGG | 0.635926 | 2_1:-911278 | None:intergenic |
| TGGGAATTCCATCAGAACTG+AGG | 0.659138 | 2_1:+910843 | Msa0186200:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTAAAAATACATATTTTTT+TGG | + | chr2_1:911340-911359 | Msa0186200:intron | 10.0% |
| !!! | ACTAAAAATACATATTTTTT+TGG | + | chr2_1:911340-911359 | Msa0186200:intron | 10.0% |
| !!! | TAACAAACTTTAAGAAATTA+TGG | + | chr2_1:911366-911385 | Msa0186200:intron | 15.0% |
| !! | AAAAAAACAGAAATTCTTTA+AGG | - | chr2_1:911445-911464 | None:intergenic | 15.0% |
| !! | TTTACTCCTATAATTAAATT+TGG | - | chr2_1:911714-911733 | None:intergenic | 15.0% |
| !!! | TGATTAATGAATTTTATCTA+AGG | - | chr2_1:911883-911902 | None:intergenic | 15.0% |
| !!! | TTCTAATTTTGATAATATAG+TGG | + | chr2_1:911984-912003 | Msa0186200:intron | 15.0% |
| !!! | TAACAAACTTTAAGAAATTA+TGG | + | chr2_1:911366-911385 | Msa0186200:intron | 15.0% |
| !! | AAAAAAACAGAAATTCTTTA+AGG | - | chr2_1:911445-911464 | None:intergenic | 15.0% |
| !! | TTTACTCCTATAATTAAATT+TGG | - | chr2_1:911714-911733 | None:intergenic | 15.0% |
| !!! | TGATTAATGAATTTTATCTA+AGG | - | chr2_1:911883-911902 | None:intergenic | 15.0% |
| !!! | TTCTAATTTTGATAATATAG+TGG | + | chr2_1:911984-912003 | Msa0186200:intron | 15.0% |
| !! | GATGAATAAGAAAATTAAAC+TGG | - | chr2_1:910993-911012 | None:intergenic | 20.0% |
| !! | CATATTAAGAAAATGACAAA+CGG | - | chr2_1:911204-911223 | None:intergenic | 20.0% |
| !!! | TTTGATAATATAGTGGTTTT+TGG | + | chr2_1:911991-912010 | Msa0186200:intron | 20.0% |
| !! | GATGAATAAGAAAATTAAAC+TGG | - | chr2_1:910993-911012 | None:intergenic | 20.0% |
| !! | CATATTAAGAAAATGACAAA+CGG | - | chr2_1:911204-911223 | None:intergenic | 20.0% |
| !!! | TTTGATAATATAGTGGTTTT+TGG | + | chr2_1:911991-912010 | Msa0186200:intron | 20.0% |
| !! | ATTTTCATCAATCAAGTCAT+AGG | + | chr2_1:911089-911108 | Msa0186200:intron | 25.0% |
| !! | TCATTTTCTTAATATGCAGA+AGG | + | chr2_1:911208-911227 | Msa0186200:intron | 25.0% |
| !! | ATCTTTTATGGACAAAACTT+AGG | + | chr2_1:911296-911315 | Msa0186200:intron | 25.0% |
| ! | TATCTCAAATGTAACAGATA+AGG | - | chr2_1:911488-911507 | None:intergenic | 25.0% |
| ! | ATGCCACCAAATTTAATTAT+AGG | + | chr2_1:911705-911724 | Msa0186200:intron | 25.0% |
| ! | ACTCCTATAATTAAATTTGG+TGG | - | chr2_1:911711-911730 | None:intergenic | 25.0% |
| !!! | TAGGAGTAAAAGTATCATTT+CGG | + | chr2_1:911724-911743 | Msa0186200:intron | 25.0% |
| ! | ATCACTTGAATCTTATTACT+TGG | + | chr2_1:911899-911918 | Msa0186200:intron | 25.0% |
| !! | ATTTTCATCAATCAAGTCAT+AGG | + | chr2_1:911089-911108 | Msa0186200:intron | 25.0% |
| !! | TCATTTTCTTAATATGCAGA+AGG | + | chr2_1:911208-911227 | Msa0186200:intron | 25.0% |
| !! | ATCTTTTATGGACAAAACTT+AGG | + | chr2_1:911296-911315 | Msa0186200:intron | 25.0% |
| ! | TATCTCAAATGTAACAGATA+AGG | - | chr2_1:911488-911507 | None:intergenic | 25.0% |
| ! | ATGCCACCAAATTTAATTAT+AGG | + | chr2_1:911705-911724 | Msa0186200:intron | 25.0% |
| ! | ACTCCTATAATTAAATTTGG+TGG | - | chr2_1:911711-911730 | None:intergenic | 25.0% |
| !!! | TAGGAGTAAAAGTATCATTT+CGG | + | chr2_1:911724-911743 | Msa0186200:intron | 25.0% |
| ! | ATCACTTGAATCTTATTACT+TGG | + | chr2_1:911899-911918 | Msa0186200:intron | 25.0% |
| !! | CAGCAAACTTGTGTTTTTAT+TGG | - | chr2_1:910882-910901 | None:intergenic | 30.0% |
| CATAAAAGATTACGTACAGT+AGG | - | chr2_1:911286-911305 | None:intergenic | 30.0% | |
| ! | CTACTGTACGTAATCTTTTA+TGG | + | chr2_1:911284-911303 | Msa0186200:intron | 30.0% |
| TTATGGATTTGAGAAAACCA+TGG | + | chr2_1:911383-911402 | Msa0186200:intron | 30.0% | |
| !! | AGCTTTAGAAAATTCACAGT+TGG | + | chr2_1:911521-911540 | Msa0186200:intron | 30.0% |
| !! | CAGCAAACTTGTGTTTTTAT+TGG | - | chr2_1:910882-910901 | None:intergenic | 30.0% |
| CATAAAAGATTACGTACAGT+AGG | - | chr2_1:911286-911305 | None:intergenic | 30.0% | |
| ! | CTACTGTACGTAATCTTTTA+TGG | + | chr2_1:911284-911303 | Msa0186200:intron | 30.0% |
| TTATGGATTTGAGAAAACCA+TGG | + | chr2_1:911383-911402 | Msa0186200:intron | 30.0% | |
| !! | AGCTTTAGAAAATTCACAGT+TGG | + | chr2_1:911521-911540 | Msa0186200:intron | 30.0% |
| TCAATCAAGTCATAGGTGAT+AGG | + | chr2_1:911096-911115 | Msa0186200:intron | 35.0% | |
| CTTCTTAACTAAGCTATCCA+TGG | - | chr2_1:911403-911422 | None:intergenic | 35.0% | |
| AAACCTCAATTATACTGCTC+AGG | + | chr2_1:911575-911594 | Msa0186200:CDS | 35.0% | |
| !! | AATTTAAGTTGAGATCGCAC+CGG | - | chr2_1:911616-911635 | None:intergenic | 35.0% |
| TAGCTAACGATTTGATTCCA+CGG | + | chr2_1:911775-911794 | Msa0186200:intron | 35.0% | |
| TCAATCAAGTCATAGGTGAT+AGG | + | chr2_1:911096-911115 | Msa0186200:intron | 35.0% | |
| CTTCTTAACTAAGCTATCCA+TGG | - | chr2_1:911403-911422 | None:intergenic | 35.0% | |
| AAACCTCAATTATACTGCTC+AGG | + | chr2_1:911575-911594 | Msa0186200:CDS | 35.0% | |
| !! | AATTTAAGTTGAGATCGCAC+CGG | - | chr2_1:911616-911635 | None:intergenic | 35.0% |
| TAGCTAACGATTTGATTCCA+CGG | + | chr2_1:911775-911794 | Msa0186200:intron | 35.0% | |
| CATAGGTGATAGGTATAGTG+TGG | + | chr2_1:911106-911125 | Msa0186200:intron | 40.0% | |
| AAGATTACGTACAGTAGGCA+CGG | - | chr2_1:911281-911300 | None:intergenic | 40.0% | |
| ATTCACAGTTGGTTGCAGTT+CGG | + | chr2_1:911532-911551 | Msa0186200:intron | 40.0% | |
| GACTCAACTAATCGAGAGTT+TGG | + | chr2_1:911806-911825 | Msa0186200:intron | 40.0% | |
| CAACTAATCGAGAGTTTGGT+TGG | + | chr2_1:911810-911829 | Msa0186200:intron | 40.0% | |
| CATAGGTGATAGGTATAGTG+TGG | + | chr2_1:911106-911125 | Msa0186200:intron | 40.0% | |
| AAGATTACGTACAGTAGGCA+CGG | - | chr2_1:911281-911300 | None:intergenic | 40.0% | |
| ATTCACAGTTGGTTGCAGTT+CGG | + | chr2_1:911532-911551 | Msa0186200:intron | 40.0% | |
| GACTCAACTAATCGAGAGTT+TGG | + | chr2_1:911806-911825 | Msa0186200:intron | 40.0% | |
| CAACTAATCGAGAGTTTGGT+TGG | + | chr2_1:911810-911829 | Msa0186200:intron | 40.0% | |
| TGGGAATTCCATCAGAACTG+AGG | + | chr2_1:910843-910862 | Msa0186200:CDS | 45.0% | |
| GGGAATTCCATCAGAACTGA+GGG | + | chr2_1:910844-910863 | Msa0186200:CDS | 45.0% | |
| AACATCTTCTGCTCTTCTGC+GGG | - | chr2_1:910914-910933 | None:intergenic | 45.0% | |
| CAACATCTTCTGCTCTTCTG+CGG | - | chr2_1:910915-910934 | None:intergenic | 45.0% | |
| CAGAAGAGCAGAAGATGTTG+AGG | + | chr2_1:910915-910934 | Msa0186200:CDS | 45.0% | |
| AGGTCTAGTCAATGTACAGC+TGG | + | chr2_1:910935-910954 | Msa0186200:CDS | 45.0% | |
| TTGCAGTTCGGATGATTCCA+TGG | + | chr2_1:911544-911563 | Msa0186200:CDS | 45.0% | |
| TGCAGTTCGGATGATTCCAT+GGG | + | chr2_1:911545-911564 | Msa0186200:CDS | 45.0% | |
| CGCTGCTGACAAAACAATCT+TGG | + | chr2_1:912051-912070 | Msa0186200:CDS | 45.0% | |
| TGGGAATTCCATCAGAACTG+AGG | + | chr2_1:910843-910862 | Msa0186200:CDS | 45.0% | |
| GGGAATTCCATCAGAACTGA+GGG | + | chr2_1:910844-910863 | Msa0186200:CDS | 45.0% | |
| AACATCTTCTGCTCTTCTGC+GGG | - | chr2_1:910914-910933 | None:intergenic | 45.0% | |
| CAACATCTTCTGCTCTTCTG+CGG | - | chr2_1:910915-910934 | None:intergenic | 45.0% | |
| CAGAAGAGCAGAAGATGTTG+AGG | + | chr2_1:910915-910934 | Msa0186200:CDS | 45.0% | |
| AGGTCTAGTCAATGTACAGC+TGG | + | chr2_1:910935-910954 | Msa0186200:CDS | 45.0% | |
| TTGCAGTTCGGATGATTCCA+TGG | + | chr2_1:911544-911563 | Msa0186200:CDS | 45.0% | |
| TGCAGTTCGGATGATTCCAT+GGG | + | chr2_1:911545-911564 | Msa0186200:CDS | 45.0% | |
| CGCTGCTGACAAAACAATCT+TGG | + | chr2_1:912051-912070 | Msa0186200:CDS | 45.0% | |
| ! | CACATGTCCCTCAGTTCTGA+TGG | - | chr2_1:910854-910873 | None:intergenic | 50.0% |
| CATCAGAACTGAGGGACATG+TGG | + | chr2_1:910852-910871 | Msa0186200:CDS | 50.0% | |
| TCGGATGATTCCATGGGCAA+AGG | + | chr2_1:911551-911570 | Msa0186200:CDS | 50.0% | |
| TTGAGGTTTGCCTTTGCCCA+TGG | - | chr2_1:911564-911583 | None:intergenic | 50.0% | |
| GCGCCTGAGCAGTATAATTG+AGG | - | chr2_1:911581-911600 | None:intergenic | 50.0% | |
| CAGGCGCTTATCATATCTGC+CGG | + | chr2_1:911594-911613 | Msa0186200:CDS | 50.0% | |
| AGTTGAGTCTGTATCGTCCG+TGG | - | chr2_1:911795-911814 | None:intergenic | 50.0% | |
| CAGAGACTCTTCTAGCAGCA+GGG | - | chr2_1:912095-912114 | None:intergenic | 50.0% | |
| TCAGAGACTCTTCTAGCAGC+AGG | - | chr2_1:912096-912115 | None:intergenic | 50.0% | |
| ! | CACATGTCCCTCAGTTCTGA+TGG | - | chr2_1:910854-910873 | None:intergenic | 50.0% |
| CATCAGAACTGAGGGACATG+TGG | + | chr2_1:910852-910871 | Msa0186200:CDS | 50.0% | |
| TCGGATGATTCCATGGGCAA+AGG | + | chr2_1:911551-911570 | Msa0186200:CDS | 50.0% | |
| TTGAGGTTTGCCTTTGCCCA+TGG | - | chr2_1:911564-911583 | None:intergenic | 50.0% | |
| GCGCCTGAGCAGTATAATTG+AGG | - | chr2_1:911581-911600 | None:intergenic | 50.0% | |
| CAGGCGCTTATCATATCTGC+CGG | + | chr2_1:911594-911613 | Msa0186200:CDS | 50.0% | |
| AGTTGAGTCTGTATCGTCCG+TGG | - | chr2_1:911795-911814 | None:intergenic | 50.0% | |
| CAGAGACTCTTCTAGCAGCA+GGG | - | chr2_1:912095-912114 | None:intergenic | 50.0% | |
| TCAGAGACTCTTCTAGCAGC+AGG | - | chr2_1:912096-912115 | None:intergenic | 50.0% | |
| ! | TATGCAGAAGGTGTGCGTGC+TGG | + | chr2_1:911220-911239 | Msa0186200:intron | 55.0% |
| AGGTGTGCGTGCTGGATTCA+AGG | + | chr2_1:911228-911247 | Msa0186200:CDS | 55.0% | |
| ! | TATGCAGAAGGTGTGCGTGC+TGG | + | chr2_1:911220-911239 | Msa0186200:intron | 55.0% |
| AGGTGTGCGTGCTGGATTCA+AGG | + | chr2_1:911228-911247 | Msa0186200:CDS | 55.0% | |
| CGTGCTGGATTCAAGGCAGC+CGG | + | chr2_1:911235-911254 | Msa0186200:CDS | 60.0% | |
| GGATTCAAGGCAGCCGGCAT+CGG | + | chr2_1:911241-911260 | Msa0186200:CDS | 60.0% | |
| ACTCGCCACACATCCGATGC+CGG | - | chr2_1:911257-911276 | None:intergenic | 60.0% | |
| CGTGCTGGATTCAAGGCAGC+CGG | + | chr2_1:911235-911254 | Msa0186200:CDS | 60.0% | |
| GGATTCAAGGCAGCCGGCAT+CGG | + | chr2_1:911241-911260 | Msa0186200:CDS | 60.0% | |
| ACTCGCCACACATCCGATGC+CGG | - | chr2_1:911257-911276 | None:intergenic | 60.0% | |
| ! | GGCAGCCGGCATCGGATGTG+TGG | + | chr2_1:911249-911268 | Msa0186200:CDS | 70.0% |
| ! | GGCAGCCGGCATCGGATGTG+TGG | + | chr2_1:911249-911268 | Msa0186200:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 910842 | 912129 | 910842 | ID=Msa0186200;Name=Msa0186200 |
| chr2_1 | mRNA | 910842 | 912129 | 910842 | ID=Msa0186200-mRNA-1;Parent=Msa0186200;Name=Msa0186200-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0.66|0.25|1|1|1|4|0|117 |
| chr2_1 | exon | 910842 | 910956 | 910842 | ID=Msa0186200-mRNA-1:exon:214;Parent=Msa0186200-mRNA-1 |
| chr2_1 | exon | 911227 | 911288 | 911227 | ID=Msa0186200-mRNA-1:exon:215;Parent=Msa0186200-mRNA-1 |
| chr2_1 | exon | 911540 | 911615 | 911540 | ID=Msa0186200-mRNA-1:exon:216;Parent=Msa0186200-mRNA-1 |
| chr2_1 | exon | 912029 | 912129 | 912029 | ID=Msa0186200-mRNA-1:exon:217;Parent=Msa0186200-mRNA-1 |
| chr2_1 | CDS | 910842 | 910956 | 910842 | ID=Msa0186200-mRNA-1:cds;Parent=Msa0186200-mRNA-1 |
| chr2_1 | CDS | 911227 | 911288 | 911227 | ID=Msa0186200-mRNA-1:cds;Parent=Msa0186200-mRNA-1 |
| chr2_1 | CDS | 911540 | 911615 | 911540 | ID=Msa0186200-mRNA-1:cds;Parent=Msa0186200-mRNA-1 |
| chr2_1 | CDS | 912029 | 912129 | 912029 | ID=Msa0186200-mRNA-1:cds;Parent=Msa0186200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
