Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270830 | XP_003593087.2 | 97.519 | 403 | 7 | 1 | 1 | 403 | 1 | 400 | 0.0 | 805 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270830 | sp|Q8BJ56|PLPL2_MOUSE | 27.953 | 254 | 149 | 6 | 152 | 382 | 10 | 252 | 3.23e-17 | 86.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270830 | A2Q497 | 97.519 | 403 | 7 | 1 | 1 | 403 | 1 | 400 | 0.0 | 805 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007810 | Msa0270830 | 0.806021 | 1.006970e-49 | -8.615850e-47 |
| Msa0026250 | Msa0270830 | -0.819541 | 1.100053e-52 | -8.615850e-47 |
| Msa0034700 | Msa0270830 | 0.842451 | 2.565774e-58 | -8.615850e-47 |
| Msa0035740 | Msa0270830 | -0.811336 | 7.367669e-51 | -8.615850e-47 |
| Msa0038150 | Msa0270830 | 0.804493 | 2.103636e-49 | -8.615850e-47 |
| Msa0038750 | Msa0270830 | 0.804003 | 2.660597e-49 | -8.615850e-47 |
| Msa0042950 | Msa0270830 | 0.836791 | 7.608354e-57 | -8.615850e-47 |
| Msa0046020 | Msa0270830 | 0.801206 | 1.004434e-48 | -8.615850e-47 |
| Msa0056230 | Msa0270830 | 0.814273 | 1.675646e-51 | -8.615850e-47 |
| Msa0061130 | Msa0270830 | 0.816958 | 4.227875e-52 | -8.615850e-47 |
| Msa0074060 | Msa0270830 | -0.819274 | 1.265796e-52 | -8.615850e-47 |
| Msa0075740 | Msa0270830 | -0.823215 | 1.561572e-53 | -8.615850e-47 |
| Msa0075750 | Msa0270830 | -0.821928 | 3.110592e-53 | -8.615850e-47 |
| Msa0077570 | Msa0270830 | 0.865231 | 6.862998e-65 | -8.615850e-47 |
| Msa0078160 | Msa0270830 | 0.803962 | 2.713237e-49 | -8.615850e-47 |
| Msa0089700 | Msa0270830 | 0.802138 | 6.467274e-49 | -8.615850e-47 |
| Msa0094170 | Msa0270830 | 0.815627 | 8.391668e-52 | -8.615850e-47 |
| Msa0095810 | Msa0270830 | 0.802673 | 5.017048e-49 | -8.615850e-47 |
| Msa0097220 | Msa0270830 | 0.804705 | 1.900109e-49 | -8.615850e-47 |
| Msa0105680 | Msa0270830 | 0.836203 | 1.074056e-56 | -8.615850e-47 |
| Msa0120100 | Msa0270830 | 0.810108 | 1.357950e-50 | -8.615850e-47 |
| Msa0120160 | Msa0270830 | 0.808340 | 3.249364e-50 | -8.615850e-47 |
| Msa0127350 | Msa0270830 | 0.810361 | 1.197590e-50 | -8.615850e-47 |
| Msa0129930 | Msa0270830 | 0.819485 | 1.133350e-52 | -8.615850e-47 |
| Msa0133140 | Msa0270830 | 0.823855 | 1.106355e-53 | -8.615850e-47 |
| Msa0136870 | Msa0270830 | 0.835562 | 1.561546e-56 | -8.615850e-47 |
| Msa0140870 | Msa0270830 | 0.803837 | 2.880901e-49 | -8.615850e-47 |
| Msa0145990 | Msa0270830 | 0.809043 | 2.299703e-50 | -8.615850e-47 |
| Msa0146390 | Msa0270830 | -0.804901 | 1.729591e-49 | -8.615850e-47 |
| Msa0152190 | Msa0270830 | 0.845025 | 5.251879e-59 | -8.615850e-47 |
| Msa0154880 | Msa0270830 | 0.803673 | 3.115456e-49 | -8.615850e-47 |
| Msa0159730 | Msa0270830 | -0.808454 | 3.072575e-50 | -8.615850e-47 |
| Msa0167150 | Msa0270830 | 0.800004 | 1.765998e-48 | -8.615850e-47 |
| Msa0173380 | Msa0270830 | -0.800572 | 1.353267e-48 | -8.615850e-47 |
| Msa0178840 | Msa0270830 | 0.848763 | 4.981036e-60 | -8.615850e-47 |
| Msa0189250 | Msa0270830 | 0.851316 | 9.611396e-61 | -8.615850e-47 |
| Msa0219280 | Msa0270830 | -0.802359 | 5.822931e-49 | -8.615850e-47 |
| Msa0225790 | Msa0270830 | 0.811894 | 5.572162e-51 | -8.615850e-47 |
| Msa0258910 | Msa0270830 | -0.810044 | 1.401581e-50 | -8.615850e-47 |
| Msa0259450 | Msa0270830 | 0.803426 | 3.505198e-49 | -8.615850e-47 |
| Msa0259570 | Msa0270830 | 0.806444 | 8.201353e-50 | -8.615850e-47 |
| Msa0260580 | Msa0270830 | 0.810568 | 1.080704e-50 | -8.615850e-47 |
| Msa0260640 | Msa0270830 | 0.808962 | 2.393433e-50 | -8.615850e-47 |
| Msa0261660 | Msa0270830 | 0.805654 | 1.202355e-49 | -8.615850e-47 |
| Msa0267450 | Msa0270830 | 0.800738 | 1.252145e-48 | -8.615850e-47 |
| Msa0269220 | Msa0270830 | 0.824055 | 9.929455e-54 | -8.615850e-47 |
| Msa0270830 | Msa0305630 | 0.814447 | 1.533788e-51 | -8.615850e-47 |
| Msa0270830 | Msa0309680 | 0.856202 | 3.774320e-62 | -8.615850e-47 |
| Msa0270830 | Msa0317820 | 0.803623 | 3.191352e-49 | -8.615850e-47 |
| Msa0270830 | Msa0340700 | 0.809974 | 1.450951e-50 | -8.615850e-47 |
| Msa0270830 | Msa0355080 | 0.816119 | 6.517009e-52 | -8.615850e-47 |
| Msa0270830 | Msa0369580 | 0.834341 | 3.169853e-56 | -8.615850e-47 |
| Msa0270830 | Msa0371350 | 0.809993 | 1.437952e-50 | -8.615850e-47 |
| Msa0270830 | Msa0436660 | 0.811161 | 8.040843e-51 | -8.615850e-47 |
| Msa0270830 | Msa0444770 | 0.807328 | 5.332775e-50 | -8.615850e-47 |
| Msa0270830 | Msa0450890 | 0.801736 | 7.822006e-49 | -8.615850e-47 |
| Msa0270830 | Msa0463820 | 0.821656 | 3.595732e-53 | -8.615850e-47 |
| Msa0270830 | Msa0480900 | 0.805195 | 1.501075e-49 | -8.615850e-47 |
| Msa0270830 | Msa0506700 | 0.805265 | 1.450887e-49 | -8.615850e-47 |
| Msa0270830 | Msa0541880 | -0.832949 | 7.058763e-56 | -8.615850e-47 |
| Msa0270830 | Msa0541940 | -0.839514 | 1.514145e-57 | -8.615850e-47 |
| Msa0270830 | Msa0580410 | 0.809515 | 1.821723e-50 | -8.615850e-47 |
| Msa0270830 | Msa0590620 | 0.823545 | 1.307516e-53 | -8.615850e-47 |
| Msa0270830 | Msa0595270 | -0.808190 | 3.497772e-50 | -8.615850e-47 |
| Msa0270830 | Msa0598470 | 0.811768 | 5.935796e-51 | -8.615850e-47 |
| Msa0270830 | Msa0619450 | 0.814646 | 1.385898e-51 | -8.615850e-47 |
| Msa0270830 | Msa0619530 | 0.814341 | 1.618655e-51 | -8.615850e-47 |
| Msa0270830 | Msa0620900 | -0.816253 | 6.083577e-52 | -8.615850e-47 |
| Msa0270830 | Msa0638300 | 0.826382 | 2.798018e-54 | -8.615850e-47 |
| Msa0270830 | Msa0654570 | 0.805356 | 1.388789e-49 | -8.615850e-47 |
| Msa0270830 | Msa0659230 | -0.816606 | 5.071548e-52 | -8.615850e-47 |
| Msa0270830 | Msa0659580 | 0.814888 | 1.225039e-51 | -8.615850e-47 |
| Msa0270830 | Msa0673620 | 0.823830 | 1.121498e-53 | -8.615850e-47 |
| Msa0270830 | Msa0685610 | -0.841164 | 5.611091e-58 | -8.615850e-47 |
| Msa0270830 | Msa0711860 | 0.804681 | 1.922301e-49 | -8.615850e-47 |
| Msa0270830 | Msa0714230 | 0.830375 | 3.042687e-55 | -8.615850e-47 |
| Msa0270830 | Msa0742370 | 0.821330 | 4.276819e-53 | -8.615850e-47 |
| Msa0270830 | Msa0745630 | 0.824044 | 9.989050e-54 | -8.615850e-47 |
| Msa0270830 | Msa0752490 | 0.818605 | 1.796061e-52 | -8.615850e-47 |
| Msa0270830 | Msa0752770 | 0.811115 | 8.225059e-51 | -8.615850e-47 |
| Msa0270830 | Msa0755550 | 0.801170 | 1.021865e-48 | -8.615850e-47 |
| Msa0270830 | Msa0770540 | 0.811284 | 7.562528e-51 | -8.615850e-47 |
| Msa0270830 | Msa0779450 | 0.802144 | 6.448013e-49 | -8.615850e-47 |
| Msa0270830 | Msa0790650 | 0.819983 | 8.718400e-53 | -8.615850e-47 |
| Msa0270830 | Msa0792840 | 0.812168 | 4.854920e-51 | -8.615850e-47 |
| Msa0270830 | Msa0793130 | 0.800720 | 1.262562e-48 | -8.615850e-47 |
| Msa0270830 | Msa0795910 | 0.808474 | 3.042560e-50 | -8.615850e-47 |
| Msa0270830 | Msa0808500 | 0.813649 | 2.300019e-51 | -8.615850e-47 |
| Msa0270830 | Msa0823480 | 0.845060 | 5.137959e-59 | -8.615850e-47 |
| Msa0270830 | Msa0827340 | 0.808728 | 2.686106e-50 | -8.615850e-47 |
| Msa0270830 | Msa0833360 | 0.811005 | 8.692433e-51 | -8.615850e-47 |
| Msa0270830 | Msa0840540 | -0.802482 | 5.493776e-49 | -8.615850e-47 |
| Msa0270830 | Msa0853200 | 0.823589 | 1.276830e-53 | -8.615850e-47 |
| Msa0270830 | Msa0862480 | 0.826225 | 3.048553e-54 | -8.615850e-47 |
| Msa0270830 | Msa0866060 | 0.802100 | 6.584040e-49 | -8.615850e-47 |
| Msa0270830 | Msa0866510 | 0.806874 | 6.655841e-50 | -8.615850e-47 |
| Msa0270830 | Msa0904590 | -0.805667 | 1.194857e-49 | -8.615850e-47 |
| Msa0270830 | Msa0906180 | 0.802641 | 5.095703e-49 | -8.615850e-47 |
| Msa0270830 | Msa0941150 | 0.801098 | 1.056982e-48 | -8.615850e-47 |
| Msa0270830 | Msa0968060 | 0.806210 | 9.187546e-50 | -8.615850e-47 |
| Msa0270830 | Msa0978550 | 0.800539 | 1.374796e-48 | -8.615850e-47 |
| Msa0270830 | Msa1017610 | 0.830615 | 2.657979e-55 | -8.615850e-47 |
| Msa0270830 | Msa1027160 | -0.820786 | 5.704954e-53 | -8.615850e-47 |
| Msa0270830 | Msa1031190 | 0.801960 | 7.034468e-49 | -8.615850e-47 |
| Msa0270830 | Msa1033430 | -0.826440 | 2.710394e-54 | -8.615850e-47 |
| Msa0270830 | Msa1039440 | 0.807899 | 4.034701e-50 | -8.615850e-47 |
| Msa0270830 | Msa1058550 | 0.802877 | 4.554647e-49 | -8.615850e-47 |
| Msa0270830 | Msa1067980 | 0.805205 | 1.493802e-49 | -8.615850e-47 |
| Msa0270830 | Msa1070370 | 0.800673 | 1.290505e-48 | -8.615850e-47 |
| Msa0270830 | Msa1073050 | -0.816674 | 4.897279e-52 | -8.615850e-47 |
| Msa0270830 | Msa1082640 | 0.815253 | 1.016415e-51 | -8.615850e-47 |
| Msa0270830 | Msa1083620 | 0.810903 | 9.146381e-51 | -8.615850e-47 |
| Msa0270830 | Msa1111910 | -0.804906 | 1.724778e-49 | -8.615850e-47 |
| Msa0270830 | Msa1128610 | 0.823531 | 1.317309e-53 | -8.615850e-47 |
| Msa0270830 | Msa1132250 | 0.800802 | 1.214552e-48 | -8.615850e-47 |
| Msa0270830 | Msa1132880 | 0.808438 | 3.097206e-50 | -8.615850e-47 |
| Msa0270830 | Msa1154320 | -0.822880 | 1.869349e-53 | -8.615850e-47 |
| Msa0270830 | Msa1154630 | -0.820461 | 6.775013e-53 | -8.615850e-47 |
| Msa0270830 | Msa1158180 | 0.800399 | 1.467987e-48 | -8.615850e-47 |
| Msa0270830 | Msa1191530 | 0.808555 | 2.923904e-50 | -8.615850e-47 |
| Msa0270830 | Msa1197740 | 0.801721 | 7.877175e-49 | -8.615850e-47 |
| Msa0270830 | Msa1204870 | 0.819553 | 1.093577e-52 | -8.615850e-47 |
| Msa0270830 | Msa1204900 | 0.811556 | 6.598698e-51 | -8.615850e-47 |
| Msa0270830 | Msa1242130 | -0.821699 | 3.513369e-53 | -8.615850e-47 |
| Msa0270830 | Msa1247200 | 0.821370 | 4.186215e-53 | -8.615850e-47 |
| Msa0270830 | Msa1250610 | -0.819978 | 8.744380e-53 | -8.615850e-47 |
| Msa0270830 | Msa1251440 | 0.807350 | 5.277332e-50 | -8.615850e-47 |
| Msa0270830 | Msa1255030 | 0.801929 | 7.140042e-49 | -8.615850e-47 |
| Msa0270830 | Msa1256490 | 0.808364 | 3.212421e-50 | -8.615850e-47 |
| Msa0270830 | Msa1257860 | 0.803153 | 3.993037e-49 | -8.615850e-47 |
| Msa0270830 | Msa1266120 | 0.800889 | 1.166275e-48 | -8.615850e-47 |
| Msa0270830 | Msa1266750 | 0.807974 | 3.888544e-50 | -8.615850e-47 |
| Msa0270830 | Msa1270860 | 0.806952 | 6.406930e-50 | -8.615850e-47 |
| Msa0270830 | Msa1283960 | -0.807130 | 5.873326e-50 | -8.615850e-47 |
| Msa0270830 | Msa1287100 | 0.821724 | 3.467731e-53 | -8.615850e-47 |
| Msa0270830 | Msa1290090 | 0.804165 | 2.462891e-49 | -8.615850e-47 |
| Msa0270830 | Msa1295480 | 0.819590 | 1.072080e-52 | -8.615850e-47 |
| Msa0270830 | Msa1296810 | 0.807445 | 5.036352e-50 | -8.615850e-47 |
| Msa0270830 | Msa1303690 | 0.813986 | 1.938452e-51 | -8.615850e-47 |
| Msa0270830 | Msa1326640 | -0.819175 | 1.332895e-52 | -8.615850e-47 |
| Msa0270830 | Msa1326680 | -0.824447 | 8.032462e-54 | -8.615850e-47 |
| Msa0270830 | Msa1328680 | 0.801450 | 8.953065e-49 | -8.615850e-47 |
| Msa0270830 | Msa1331530 | 0.801523 | 8.648172e-49 | -8.615850e-47 |
| Msa0270830 | Msa1338810 | 0.814477 | 1.510359e-51 | -8.615850e-47 |
| Msa0270830 | Msa1352600 | 0.807093 | 5.981954e-50 | -8.615850e-47 |
| Msa0270830 | Msa1357070 | -0.800100 | 1.688354e-48 | -8.615850e-47 |
| Msa0270830 | Msa1360070 | 0.803807 | 2.922850e-49 | -8.615850e-47 |
| Msa0270830 | Msa1361580 | 0.803875 | 2.829301e-49 | -8.615850e-47 |
| Msa0270830 | Msa1361670 | 0.824577 | 7.487697e-54 | -8.615850e-47 |
| Msa0270830 | Msa1363170 | 0.812720 | 3.677413e-51 | -8.615850e-47 |
| Msa0270830 | Msa1366140 | 0.831140 | 1.976551e-55 | -8.615850e-47 |
| Msa0270830 | Msa1373420 | 0.801331 | 9.471110e-49 | -8.615850e-47 |
| Msa0270830 | Msa1375650 | 0.820957 | 5.212291e-53 | -8.615850e-47 |
| Msa0270830 | Msa1381340 | 0.806162 | 9.404388e-50 | -8.615850e-47 |
| Msa0270830 | Msa1387100 | 0.812651 | 3.808939e-51 | -8.615850e-47 |
| Msa0270830 | Msa1387450 | 0.848301 | 6.688165e-60 | -8.615850e-47 |
| Msa0270830 | Msa1396110 | -0.816469 | 5.441160e-52 | -8.615850e-47 |
| Msa0270830 | Msa1398150 | 0.804866 | 1.758528e-49 | -8.615850e-47 |
| Msa0270830 | Msa1407160 | 0.802396 | 5.723355e-49 | -8.615850e-47 |
| Msa0270830 | Msa1412800 | 0.810657 | 1.033667e-50 | -8.615850e-47 |
| Msa0270830 | Msa1428230 | 0.800348 | 1.503077e-48 | -8.615850e-47 |
| Msa0270830 | Msa1430630 | 0.809723 | 1.643524e-50 | -8.615850e-47 |
| Msa0270830 | Msa1431510 | 0.824841 | 6.486586e-54 | -8.615850e-47 |
| Msa0270830 | Msa1436640 | -0.802207 | 6.259677e-49 | -8.615850e-47 |
| Msa0270830 | Msa1439000 | 0.805833 | 1.102732e-49 | -8.615850e-47 |
| Msa0270830 | Msa1452230 | 0.836334 | 9.947920e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270830 | MtrunA17_Chr2g0278271 | 97.519 | 403 | 7 | 1 | 1 | 403 | 1 | 400 | 0.0 | 805 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270830 | AT1G33270.1 | 66.759 | 361 | 99 | 3 | 40 | 392 | 13 | 360 | 4.20e-175 | 493 |
| Msa0270830 | AT1G33270.2 | 66.319 | 288 | 76 | 3 | 40 | 319 | 13 | 287 | 3.21e-135 | 389 |
Find 145 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATTTAATATTTACAAAAT+AGG | 0.150928 | 2_3:-2156920 | Msa0270830:three_prime_UTR |
| AGACATTTGGAATAGTTATT+TGG | 0.195790 | 2_3:-2156704 | Msa0270830:three_prime_UTR |
| CAATTATGCTACCCTTTAAA+TGG | 0.227483 | 2_3:-2157096 | Msa0270830:three_prime_UTR |
| TTAAGGTGATGTCCATTTAA+AGG | 0.227505 | 2_3:+2157084 | None:intergenic |
| TTGCTGTAACACAGCTTCTT+TGG | 0.250898 | 2_3:-2158551 | Msa0270830:CDS |
| CTTCTCTTTCCTTATCATCT+TGG | 0.258626 | 2_3:-2160938 | Msa0270830:CDS |
| GTCTGTGCTGTAGTTGCTTC+TGG | 0.266151 | 2_3:-2159811 | Msa0270830:CDS |
| TATTTAATATTTACAAAATA+GGG | 0.273161 | 2_3:-2156919 | Msa0270830:three_prime_UTR |
| GGAGAGAATTGGTGCTGTTA+TGG | 0.285621 | 2_3:-2161071 | Msa0270830:CDS |
| CTCTTCTCCGTTCACGCAAA+TGG | 0.290088 | 2_3:-2161431 | Msa0270830:exon |
| CTTGACCGACTCTTTGAGTT+TGG | 0.293311 | 2_3:-2157263 | Msa0270830:CDS |
| TTTACTTCTTCCTTTATTCC+AGG | 0.293412 | 2_3:-2158468 | Msa0270830:CDS |
| ATGACGACTTTCCCTCGTTT+TGG | 0.297382 | 2_3:+2161537 | None:intergenic |
| TCTGCAGTTCCTAACTTCTA+AGG | 0.302354 | 2_3:-2157044 | Msa0270830:three_prime_UTR |
| TTTGATAGCTACTAAAATAT+TGG | 0.304460 | 2_3:-2159770 | Msa0270830:CDS |
| GATATCTTGATGCTGCTGTC+TGG | 0.307350 | 2_3:-2157241 | Msa0270830:CDS |
| AAAACACTTGTGTAATCATT+TGG | 0.318930 | 2_3:-2156665 | Msa0270830:three_prime_UTR |
| AGGAGAGGGAGAAGGGGTTG+TGG | 0.320455 | 2_3:+2161246 | None:intergenic |
| CCTCCCTCCAATGATAATTA+AGG | 0.321771 | 2_3:+2157067 | None:intergenic |
| AGATTCAACCTGATGTGATT+TGG | 0.334321 | 2_3:-2161042 | Msa0270830:CDS |
| TTGGAGACCCAGGGGTTTGT+TGG | 0.335292 | 2_3:-2158532 | Msa0270830:CDS |
| TATTCAGAATGGTTACATTA+AGG | 0.335651 | 2_3:-2160900 | Msa0270830:intron |
| CATTGTACAATAGCACATTA+TGG | 0.336247 | 2_3:-2157153 | Msa0270830:exon |
| CGAAATCGTTTATGCATTGA+TGG | 0.343466 | 2_3:-2158321 | Msa0270830:CDS |
| AGGAGGAGGAGAGGGAGAAG+GGG | 0.343599 | 2_3:+2161240 | None:intergenic |
| GAACTTACAAAAGTAGATTA+TGG | 0.347245 | 2_3:-2156640 | Msa0270830:three_prime_UTR |
| AACAAATCACCCTGGAATAA+AGG | 0.350115 | 2_3:+2158458 | None:intergenic |
| GAGGAGGAGGAGAGGGAGAA+GGG | 0.352199 | 2_3:+2161239 | None:intergenic |
| GACATCACCTTAATTATCAT+TGG | 0.360150 | 2_3:-2157074 | Msa0270830:three_prime_UTR |
| TAAGGTGATGTCCATTTAAA+GGG | 0.361735 | 2_3:+2157085 | None:intergenic |
| CGAAACATCGTAGCTGGCTT+TGG | 0.362210 | 2_3:+2158342 | None:intergenic |
| GACGTTCATATAAGATCTAA+TGG | 0.364869 | 2_3:-2158885 | Msa0270830:CDS |
| TTTGTCATCCATAGGGAAAC+TGG | 0.381622 | 2_3:+2156834 | None:intergenic |
| CCATTAGCTGGTTCTTCTGC+TGG | 0.395305 | 2_3:-2159841 | Msa0270830:CDS |
| CCCTATGGATGACAAAGTTA+TGG | 0.399539 | 2_3:-2156827 | Msa0270830:three_prime_UTR |
| TGCATTGATGAGATCTTCCT+TGG | 0.414782 | 2_3:+2158494 | None:intergenic |
| TTGTAAACTAAGGAGACATT+TGG | 0.421306 | 2_3:-2156717 | Msa0270830:three_prime_UTR |
| GGAGATGAAGAAGGAGGAGA+TGG | 0.421593 | 2_3:+2161387 | None:intergenic |
| GGGGACTGCATTTCGGCTGG+GGG | 0.428347 | 2_3:-2159728 | Msa0270830:intron |
| GATTCAACCTGATGTGATTT+GGG | 0.433059 | 2_3:-2161041 | Msa0270830:CDS |
| TTGGGGAAAATTGTAAACTA+AGG | 0.434184 | 2_3:-2156727 | Msa0270830:three_prime_UTR |
| GAGACCCAGGGGTTTGTTGG+TGG | 0.434625 | 2_3:-2158529 | Msa0270830:CDS |
| TCTTCTCCGTTCACGCAAAT+GGG | 0.437353 | 2_3:-2161430 | Msa0270830:exon |
| GGAGGAGGAGGAGAGGGAGA+AGG | 0.447113 | 2_3:+2161238 | None:intergenic |
| TGCAATCCCATACGACCTGC+TGG | 0.448491 | 2_3:+2157466 | None:intergenic |
| GATCTTATATGAACGTCATC+TGG | 0.450062 | 2_3:+2158891 | None:intergenic |
| TCCCTCTCCTCCTCCTCCGC+CGG | 0.450277 | 2_3:-2161233 | Msa0270830:CDS |
| CAGGAAACCACGCCATTAGC+TGG | 0.458530 | 2_3:-2159853 | Msa0270830:CDS |
| TACAATGAGAAGGAGAGAAT+TGG | 0.460365 | 2_3:-2161082 | Msa0270830:CDS |
| CTCTGCTCCCAAATCACATC+AGG | 0.461065 | 2_3:+2161034 | None:intergenic |
| ATTTATAGCCAGTTTCCCTA+TGG | 0.461255 | 2_3:-2156842 | Msa0270830:three_prime_UTR |
| TCCGGCGGAGGAGGAGGAGA+GGG | 0.462278 | 2_3:+2161232 | None:intergenic |
| GATACTACTGCTCCTGCATT+CGG | 0.466890 | 2_3:-2157182 | Msa0270830:CDS |
| AGAAGAGTTGTAACTACTCC+TGG | 0.467503 | 2_3:-2160983 | Msa0270830:CDS |
| TGAGCAACACCAAGATGATA+AGG | 0.474367 | 2_3:+2160929 | None:intergenic |
| TTACTTCTTCCTTTATTCCA+GGG | 0.476147 | 2_3:-2158467 | Msa0270830:intron |
| ATATCTTGATGCTGCTGTCT+GGG | 0.486047 | 2_3:-2157240 | Msa0270830:CDS |
| GCGTTCTCGGGATTACAATC+TGG | 0.491090 | 2_3:+2157427 | None:intergenic |
| AAATATTGGCTGAAGATTGT+CGG | 0.498682 | 2_3:-2159756 | Msa0270830:CDS |
| CGTCGTTAGTGAAACGGAAA+CGG | 0.499050 | 2_3:+2161332 | None:intergenic |
| CCAGCAGAAGAACCAGCTAA+TGG | 0.499103 | 2_3:+2159841 | None:intergenic |
| ACCGACATCTGCAGCACAAA+CGG | 0.500017 | 2_3:-2158277 | Msa0270830:intron |
| ATGAAGAAGGAGGAGATGGA+TGG | 0.504387 | 2_3:+2161391 | None:intergenic |
| CGATTTCGAAACATCGTAGC+TGG | 0.507412 | 2_3:+2158336 | None:intergenic |
| GAAATCGTTTATGCATTGAT+GGG | 0.509760 | 2_3:-2158320 | Msa0270830:CDS |
| ATCACCTTAATTATCATTGG+AGG | 0.510078 | 2_3:-2157071 | Msa0270830:three_prime_UTR |
| GAAAAGCTCGCCGGTGGCGA+CGG | 0.510983 | 2_3:+2161192 | None:intergenic |
| TGGCTGAAGATTGTCGGAAG+GGG | 0.511558 | 2_3:-2159750 | Msa0270830:CDS |
| CACAGCTTCTTTGGAGACCC+AGG | 0.512275 | 2_3:-2158542 | Msa0270830:CDS |
| AAAATTCAGGGATACCTGAC+GGG | 0.513793 | 2_3:+2157396 | None:intergenic |
| TTCCGGCGGAGGAGGAGGAG+AGG | 0.516187 | 2_3:+2161231 | None:intergenic |
| AATTTGTTTCTGAATATCAC+AGG | 0.517161 | 2_3:+2156778 | None:intergenic |
| AAATCCTTCGCCGTCGCCAC+CGG | 0.518247 | 2_3:-2161202 | Msa0270830:CDS |
| CGTATGGGATTGCAAGGGAT+AGG | 0.518266 | 2_3:-2157457 | Msa0270830:CDS |
| CTGATCCACCAACAAACCCC+TGG | 0.519698 | 2_3:+2158524 | None:intergenic |
| TATTGCGATAGAATTCTTGC+TGG | 0.520803 | 2_3:-2156979 | Msa0270830:three_prime_UTR |
| ACAATGCTATTTCCGAATGC+AGG | 0.521454 | 2_3:+2157170 | None:intergenic |
| ATGCATCCCATTTGCGTGAA+CGG | 0.522447 | 2_3:+2161424 | None:intergenic |
| ACGTTCATATAAGATCTAAT+GGG | 0.522976 | 2_3:-2158884 | Msa0270830:CDS |
| GGTGGATCAGTTTGATTCCA+AGG | 0.522998 | 2_3:-2158511 | Msa0270830:CDS |
| AGATCTAATGGGAGAGTTCG+AGG | 0.526204 | 2_3:-2158873 | Msa0270830:intron |
| GTATGGGATTGCAAGGGATA+GGG | 0.532482 | 2_3:-2157456 | Msa0270830:CDS |
| AAGGAGGAGATGGATGGAGC+TGG | 0.535892 | 2_3:+2161397 | None:intergenic |
| AGTTGCTTCTGGAGCTAGCA+TGG | 0.537640 | 2_3:-2159800 | Msa0270830:CDS |
| ACGGTAACGGTGAGCTTGAG+AGG | 0.538984 | 2_3:+2161363 | None:intergenic |
| CTGCAGTTCCTAACTTCTAA+GGG | 0.543653 | 2_3:-2157043 | Msa0270830:three_prime_UTR |
| TCACCACCGGAGTCGATTCA+CGG | 0.552472 | 2_3:+2161140 | None:intergenic |
| CTCGCCGGTGGCGACGGCGA+AGG | 0.555094 | 2_3:+2161198 | None:intergenic |
| CCATAACTTTGTCATCCATA+GGG | 0.555512 | 2_3:+2156827 | None:intergenic |
| ATTGCGATAGAATTCTTGCT+GGG | 0.560586 | 2_3:-2156978 | Msa0270830:three_prime_UTR |
| GGCTGAAGATTGTCGGAAGG+GGG | 0.561976 | 2_3:-2159749 | Msa0270830:CDS |
| TTAATATTTACAAAATAGGG+TGG | 0.562220 | 2_3:-2156916 | Msa0270830:three_prime_UTR |
| TCAAGAATTACATCTTCTGC+TGG | 0.562958 | 2_3:+2157281 | None:intergenic |
| GCAGGTCGTATGGGATTGCA+AGG | 0.563172 | 2_3:-2157463 | Msa0270830:CDS |
| CTGAAGATTGTCGGAAGGGG+GGG | 0.569435 | 2_3:-2159747 | Msa0270830:CDS |
| TGATGCTGCTGTCTGGGCAA+AGG | 0.572016 | 2_3:-2157234 | Msa0270830:CDS |
| GGTTAACGTCGTTAGTGAAA+CGG | 0.575244 | 2_3:+2161326 | None:intergenic |
| GCTGAAGATTGTCGGAAGGG+GGG | 0.578978 | 2_3:-2159748 | Msa0270830:CDS |
| AGCGACCTCCGTCCAAAACG+AGG | 0.581530 | 2_3:-2161549 | None:intergenic |
| AACGGTAATGTACAATGAGA+AGG | 0.581786 | 2_3:-2161092 | Msa0270830:CDS |
| ACAGCTTCTTTGGAGACCCA+GGG | 0.582345 | 2_3:-2158541 | Msa0270830:CDS |
| AAATCGTTTATGCATTGATG+GGG | 0.582936 | 2_3:-2158319 | Msa0270830:CDS |
| GCCATAACTTTGTCATCCAT+AGG | 0.587101 | 2_3:+2156826 | None:intergenic |
| AACGGAAAGTGTGACGGTAA+CGG | 0.587248 | 2_3:+2161350 | None:intergenic |
| AATTGAATTGAGTGCGCGTG+GGG | 0.592504 | 2_3:+2161293 | None:intergenic |
| TCACCTTAATTATCATTGGA+GGG | 0.593314 | 2_3:-2157070 | Msa0270830:three_prime_UTR |
| GAGAGTGAAAGATATTGAAG+CGG | 0.595167 | 2_3:-2161014 | Msa0270830:CDS |
| GGTAACGGTGAGCTTGAGAG+GGG | 0.595995 | 2_3:+2161365 | None:intergenic |
| GTTCACGCAAATGGGATGCA+TGG | 0.600746 | 2_3:-2161422 | Msa0270830:exon |
| ACCGTTTGTGCTGCAGATGT+CGG | 0.603463 | 2_3:+2158276 | None:intergenic |
| CGGTAACGGTGAGCTTGAGA+GGG | 0.603909 | 2_3:+2161364 | None:intergenic |
| CATTTGCGTGAACGGAGAAG+AGG | 0.607165 | 2_3:+2161432 | None:intergenic |
| GAATTCAAATTCGAGTTCAA+CGG | 0.607604 | 2_3:-2161110 | Msa0270830:CDS |
| TGCGATAGAATTCTTGCTGG+GGG | 0.608221 | 2_3:-2156976 | Msa0270830:three_prime_UTR |
| GATATCCAAACTCAAAGAGT+CGG | 0.608281 | 2_3:+2157258 | None:intergenic |
| TTGGCTGAAGATTGTCGGAA+GGG | 0.608456 | 2_3:-2159751 | Msa0270830:CDS |
| TGATCCACCAACAAACCCCT+GGG | 0.611703 | 2_3:+2158525 | None:intergenic |
| GCGACCTCCGTCCAAAACGA+GGG | 0.613103 | 2_3:-2161548 | None:intergenic |
| ACCTAAGAAAAGCTCGCCGG+TGG | 0.620128 | 2_3:+2161186 | None:intergenic |
| GAATTCTCGAACATCACCAC+CGG | 0.623839 | 2_3:+2161127 | None:intergenic |
| ATTGGCTGAAGATTGTCGGA+AGG | 0.624133 | 2_3:-2159752 | Msa0270830:CDS |
| GTGGAGTGTTGTTGAACGCG+TGG | 0.628852 | 2_3:+2161265 | None:intergenic |
| CAACAGCCGTGAATCGACTC+CGG | 0.628860 | 2_3:-2161146 | Msa0270830:CDS |
| AACGGAAACGGAAAGTGTGA+CGG | 0.631499 | 2_3:+2161344 | None:intergenic |
| AGAATTGAATTGAGTGCGCG+TGG | 0.635696 | 2_3:+2161291 | None:intergenic |
| TGAAAGATATTGAAGCGGAA+CGG | 0.645350 | 2_3:-2161009 | Msa0270830:CDS |
| TATACCTAAGAAAAGCTCGC+CGG | 0.652080 | 2_3:+2161183 | None:intergenic |
| AATCGTTTATGCATTGATGG+GGG | 0.653176 | 2_3:-2158318 | Msa0270830:CDS |
| AGAAACCAATCACAAAAGAG+AGG | 0.655385 | 2_3:-2161481 | Msa0270830:five_prime_UTR |
| TTGCGATAGAATTCTTGCTG+GGG | 0.655599 | 2_3:-2156977 | Msa0270830:three_prime_UTR |
| ACGAGGGAAAGTCGTCATCG+AGG | 0.660924 | 2_3:-2161532 | Msa0270830:five_prime_UTR |
| GAGTGTTGTTGAACGCGTGG+TGG | 0.667602 | 2_3:+2161268 | None:intergenic |
| CAGCTTCTTTGGAGACCCAG+GGG | 0.669446 | 2_3:-2158540 | Msa0270830:CDS |
| CCTTAATTATCATTGGAGGG+AGG | 0.669627 | 2_3:-2157067 | Msa0270830:three_prime_UTR |
| GTTTGTGCTGCAGATGTCGG+TGG | 0.676596 | 2_3:+2158279 | None:intergenic |
| TGCGCGTGGGGAGAAGAGTG+AGG | 0.677813 | 2_3:+2161305 | None:intergenic |
| CAGCCGTGAATCGACTCCGG+TGG | 0.679268 | 2_3:-2161143 | Msa0270830:CDS |
| GTAACGGTGAGCTTGAGAGG+GGG | 0.680996 | 2_3:+2161366 | None:intergenic |
| TTATGGATTGAAGATGCATG+AGG | 0.686616 | 2_3:-2157136 | Msa0270830:three_prime_UTR |
| AAATTCAGGGATACCTGACG+GGG | 0.689461 | 2_3:+2157397 | None:intergenic |
| GCAGCAGAGAAACTAAAACC+AGG | 0.702246 | 2_3:+2160965 | None:intergenic |
| GAATTGAATTGAGTGCGCGT+GGG | 0.703219 | 2_3:+2161292 | None:intergenic |
| AGAAGAACCAGCTAATGGCG+TGG | 0.703301 | 2_3:+2159846 | None:intergenic |
| CAGGTCGTATGGGATTGCAA+GGG | 0.713449 | 2_3:-2157462 | Msa0270830:CDS |
| AATTCAGGGATACCTGACGG+GGG | 0.776486 | 2_3:+2157398 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAGTTATGAATTAAAAAA+AGG | + | chr2_3:2157299-2157318 | None:intergenic | 10.0% |
| !!! | TTTTTAATTCATAACTATTA+AGG | - | chr2_3:2157300-2157319 | Msa0270830:CDS | 10.0% |
| !! | AATTACATTTATAAATTACA+TGG | - | chr2_3:2159466-2159485 | Msa0270830:intron | 10.0% |
| !! | AATTAAACAAAAAGAAAATA+AGG | - | chr2_3:2159501-2159520 | Msa0270830:intron | 10.0% |
| !! | AATAAGTTATTTATTCAAAC+AGG | - | chr2_3:2157637-2157656 | Msa0270830:intron | 15.0% |
| !! | ATAAGTTATTTATTCAAACA+GGG | - | chr2_3:2157638-2157657 | Msa0270830:intron | 15.0% |
| !!! | TTTTTTTTTTTGGATTCTAT+TGG | - | chr2_3:2158844-2158863 | Msa0270830:intron | 15.0% |
| !!! | TTTAAAAGATATAACTGTTT+TGG | - | chr2_3:2158952-2158971 | Msa0270830:intron | 15.0% |
| !!! | TTAAAAGATATAACTGTTTT+GGG | - | chr2_3:2158953-2158972 | Msa0270830:intron | 15.0% |
| !! | GAGATATATATAATTTCATT+TGG | - | chr2_3:2159193-2159212 | Msa0270830:intron | 15.0% |
| !!! | ATTTTTATTTAGTTACTTGT+TGG | - | chr2_3:2159912-2159931 | Msa0270830:intron | 15.0% |
| !!! | ATGCCTTATAAATTTTTTTT+TGG | - | chr2_3:2159983-2160002 | Msa0270830:intron | 15.0% |
| !! | AGTCCAAAAAAAAATTTATA+AGG | + | chr2_3:2159989-2160008 | None:intergenic | 15.0% |
| !! | AGATTATCTAAATATTGAAT+GGG | + | chr2_3:2160240-2160259 | None:intergenic | 15.0% |
| !! | TAGATTATCTAAATATTGAA+TGG | + | chr2_3:2160241-2160260 | None:intergenic | 15.0% |
| !!! | CAATGTTTTAAATACTATAA+AGG | + | chr2_3:2160369-2160388 | None:intergenic | 15.0% |
| !! | AAGTATTAAAGATAAATTGA+TGG | - | chr2_3:2160421-2160440 | Msa0270830:intron | 15.0% |
| !! | AGTTATGAATTAAAAAAAGG+AGG | + | chr2_3:2157296-2157315 | None:intergenic | 20.0% |
| !! | TAAGTTATTTATTCAAACAG+GGG | - | chr2_3:2157639-2157658 | Msa0270830:intron | 20.0% |
| !! | TATCTTTGTATGTTTATCTA+GGG | - | chr2_3:2157917-2157936 | Msa0270830:intron | 20.0% |
| !! | CAATAACAAAAACATTCAAT+TGG | + | chr2_3:2157946-2157965 | None:intergenic | 20.0% |
| !!! | TTTTGTTATTGAAATAGAAC+TGG | - | chr2_3:2157955-2157974 | Msa0270830:intron | 20.0% |
| !! | TATCATTGTATGTTTATCTA+GGG | - | chr2_3:2157996-2158015 | Msa0270830:intron | 20.0% |
| !!! | AGTTATGTAATCTACTATTT+TGG | - | chr2_3:2158218-2158237 | Msa0270830:intron | 20.0% |
| !!! | TTTGATAGCTACTAAAATAT+TGG | - | chr2_3:2158395-2158414 | Msa0270830:intron | 20.0% |
| !!! | ACTTGAAGTTTAACTTTTAT+TGG | - | chr2_3:2158603-2158622 | Msa0270830:intron | 20.0% |
| !!! | CTTGAAGTTTAACTTTTATT+GGG | - | chr2_3:2158604-2158623 | Msa0270830:intron | 20.0% |
| !!! | TTGAAGTTTAACTTTTATTG+GGG | - | chr2_3:2158605-2158624 | Msa0270830:intron | 20.0% |
| !!! | AAAAATAGCTAAGCTTTTTT+GGG | + | chr2_3:2158663-2158682 | None:intergenic | 20.0% |
| !!! | AAAAAATAGCTAAGCTTTTT+TGG | + | chr2_3:2158664-2158683 | None:intergenic | 20.0% |
| !! | TAGAATCCAAAAAAAAAAAG+TGG | + | chr2_3:2158843-2158862 | None:intergenic | 20.0% |
| !! | TACTTAATAACTTTCAAGAT+AGG | + | chr2_3:2158887-2158906 | None:intergenic | 20.0% |
| !! | AGTTATTAAGTATCAGTTAT+TGG | - | chr2_3:2158895-2158914 | Msa0270830:CDS | 20.0% |
| !!! | ATATCTTTTAAAAATGCTAG+AGG | + | chr2_3:2158944-2158963 | None:intergenic | 20.0% |
| !!! | TAAAAGATATAACTGTTTTG+GGG | - | chr2_3:2158954-2158973 | Msa0270830:intron | 20.0% |
| !! | GAAATTATATATATCTCGTA+AGG | + | chr2_3:2159190-2159209 | None:intergenic | 20.0% |
| !!! | AGTTATTTTCATTATAGAAC+TGG | - | chr2_3:2159338-2159357 | Msa0270830:intron | 20.0% |
| !! | CACAAAATAATCAATCAATT+GGG | + | chr2_3:2159949-2159968 | None:intergenic | 20.0% |
| !! | TCACAAAATAATCAATCAAT+TGG | + | chr2_3:2159950-2159969 | None:intergenic | 20.0% |
| !! | AATGCATAGAACTAAATTAA+TGG | + | chr2_3:2160035-2160054 | None:intergenic | 20.0% |
| !! | TATTACTCTTCATCAATAAT+TGG | + | chr2_3:2160264-2160283 | None:intergenic | 20.0% |
| !! | ATGAAGAGTAATAAACTTTA+GGG | - | chr2_3:2160271-2160290 | Msa0270830:intron | 20.0% |
| !! | AAAATAATTCTAACTTTCTC+AGG | - | chr2_3:2160449-2160468 | Msa0270830:intron | 20.0% |
| !! | TTAATATTTACAAAATAGGG+TGG | - | chr2_3:2161249-2161268 | Msa0270830:CDS | 20.0% |
| ! | TATTCAGAATGGTTACATTA+AGG | - | chr2_3:2157265-2157284 | Msa0270830:CDS | 25.0% |
| !! | ATAACTATTAAGGACTTGTT+TGG | - | chr2_3:2157310-2157329 | Msa0270830:intron | 25.0% |
| ! | TCACTTTCATAAATTACTAC+TGG | + | chr2_3:2157470-2157489 | None:intergenic | 25.0% |
| ! | AGCTTATGAAAATAGCTTAT+AGG | - | chr2_3:2157767-2157786 | Msa0270830:intron | 25.0% |
| ! | GTATCTTTGTATGTTTATCT+AGG | - | chr2_3:2157916-2157935 | Msa0270830:intron | 25.0% |
| ! | GTATCATTGTATGTTTATCT+AGG | - | chr2_3:2157995-2158014 | Msa0270830:intron | 25.0% |
| !!! | CATGTAATTAGTTTTGACAT+TGG | - | chr2_3:2158035-2158054 | Msa0270830:intron | 25.0% |
| ! | AGTATACCAACAAGAAAATA+CGG | + | chr2_3:2158184-2158203 | None:intergenic | 25.0% |
| !! | AATAAGATCCTTGTGAATTT+TGG | - | chr2_3:2158725-2158744 | Msa0270830:intron | 25.0% |
| !! | ATAAGATCCTTGTGAATTTT+GGG | - | chr2_3:2158726-2158745 | Msa0270830:intron | 25.0% |
| !!! | AACTGTTTTTGAAACCAAAT+AGG | - | chr2_3:2159012-2159031 | Msa0270830:intron | 25.0% |
| ! | ACGTTCATATAAGATCTAAT+GGG | - | chr2_3:2159281-2159300 | Msa0270830:intron | 25.0% |
| ! | TTCACCTTATTATTTATGAC+TGG | - | chr2_3:2159393-2159412 | Msa0270830:intron | 25.0% |
| ! | TCTTCCAGTCATAAATAATA+AGG | + | chr2_3:2159400-2159419 | None:intergenic | 25.0% |
| ! | TTGTTAGTATAGTATTACCT+CGG | - | chr2_3:2159725-2159744 | Msa0270830:intron | 25.0% |
| ! | TATGCATTTATCATTTGAGA+TGG | - | chr2_3:2160047-2160066 | Msa0270830:intron | 25.0% |
| ! | AATTCTTTCATTGGAATACT+TGG | - | chr2_3:2160070-2160089 | Msa0270830:intron | 25.0% |
| ! | GATGAAGAGTAATAAACTTT+AGG | - | chr2_3:2160270-2160289 | Msa0270830:intron | 25.0% |
| !! | TCAGTTTCAAAATGAACTTT+TGG | - | chr2_3:2160337-2160356 | Msa0270830:intron | 25.0% |
| ! | AAAGCGATAAATGTTTATCA+AGG | + | chr2_3:2160657-2160676 | None:intergenic | 25.0% |
| ! | ATAAACATTTATCGCTTTAC+AGG | - | chr2_3:2160659-2160678 | Msa0270830:intron | 25.0% |
| !! | AATCATTTCAGCTTTTGAAT+TGG | - | chr2_3:2160852-2160871 | Msa0270830:intron | 25.0% |
| !! | ATCATTTCAGCTTTTGAATT+GGG | - | chr2_3:2160853-2160872 | Msa0270830:intron | 25.0% |
| !!! | TGAAATCTCAGATTTTTTTG+TGG | - | chr2_3:2161282-2161301 | Msa0270830:CDS | 25.0% |
| !!! | AATTTGTTTCTGAATATCAC+AGG | + | chr2_3:2161390-2161409 | None:intergenic | 25.0% |
| !! | TTGCTTCTTGATTTTGTATT+TGG | - | chr2_3:2161419-2161438 | Msa0270830:exon | 25.0% |
| !! | TGCTTCTTGATTTTGTATTT+GGG | - | chr2_3:2161420-2161439 | Msa0270830:exon | 25.0% |
| !! | AGACATTTGGAATAGTTATT+TGG | - | chr2_3:2161461-2161480 | Msa0270830:five_prime_UTR | 25.0% |
| ! | AAAACACTTGTGTAATCATT+TGG | - | chr2_3:2161500-2161519 | Msa0270830:five_prime_UTR | 25.0% |
| ! | GAACTTACAAAAGTAGATTA+TGG | - | chr2_3:2161525-2161544 | Msa0270830:five_prime_UTR | 25.0% |
| ! | ATTAACCTCTCTTTTGTGAT+TGG | + | chr2_3:2156692-2156711 | None:intergenic | 30.0% |
| ! | GAATTCAAATTCGAGTTCAA+CGG | - | chr2_3:2157055-2157074 | Msa0270830:three_prime_UTR | 30.0% |
| ! | GCTCATTTTCTTATTCAGAA+TGG | - | chr2_3:2157254-2157273 | Msa0270830:CDS | 30.0% |
| ! | TATTAAGGACTTGTTTGGAT+TGG | - | chr2_3:2157315-2157334 | Msa0270830:intron | 30.0% |
| TGTCTGTATCATTGTTTCAT+AGG | + | chr2_3:2157424-2157443 | None:intergenic | 30.0% | |
| CAATCAATCGCTTATAACAT+GGG | + | chr2_3:2157869-2157888 | None:intergenic | 30.0% | |
| TCAATCAATCGCTTATAACA+TGG | + | chr2_3:2157870-2157889 | None:intergenic | 30.0% | |
| ATGTTATAAGCGATTGATTG+AGG | - | chr2_3:2157869-2157888 | Msa0270830:intron | 30.0% | |
| TAGAACTGGAATTGTTGATA+AGG | - | chr2_3:2157969-2157988 | Msa0270830:intron | 30.0% | |
| !!! | TAGTTTTGACATTGGTTATC+TGG | - | chr2_3:2158043-2158062 | Msa0270830:intron | 30.0% |
| ! | ACTGTGTATCTTGTTCATTT+TGG | - | chr2_3:2158075-2158094 | Msa0270830:intron | 30.0% |
| TTTCAATATGAGTCATCTTG+AGG | - | chr2_3:2158261-2158280 | Msa0270830:intron | 30.0% | |
| ! | AAATATTGGCTGAAGATTGT+CGG | - | chr2_3:2158409-2158428 | Msa0270830:intron | 30.0% |
| ! | AAACTTCAAGTTTCAACACA+TGG | + | chr2_3:2158594-2158613 | None:intergenic | 30.0% |
| !!! | CTATCCATCAAGACTTTTTT+GGG | + | chr2_3:2158753-2158772 | None:intergenic | 30.0% |
| AAAAAGTGGCATTGCTTAAA+AGG | + | chr2_3:2158829-2158848 | None:intergenic | 30.0% | |
| !!! | GCAATGCCACTTTTTTTTTT+TGG | - | chr2_3:2158834-2158853 | Msa0270830:intron | 30.0% |
| GATTCTATTGGAATTCAGAA+TGG | - | chr2_3:2158856-2158875 | Msa0270830:intron | 30.0% | |
| AAGTATCAGTTATTGGTGAA+TGG | - | chr2_3:2158902-2158921 | Msa0270830:CDS | 30.0% | |
| ACATCATATAAGCTCCTATT+TGG | + | chr2_3:2159029-2159048 | None:intergenic | 30.0% | |
| AACTAAGTTATTATCGACAG+TGG | - | chr2_3:2159069-2159088 | Msa0270830:intron | 30.0% | |
| AATGTTCTAATCTCATAGTG+CGG | - | chr2_3:2159160-2159179 | Msa0270830:intron | 30.0% | |
| ! | TATAATTGTTTTCTCTCGAC+AGG | - | chr2_3:2159219-2159238 | Msa0270830:intron | 30.0% |
| GACGTTCATATAAGATCTAA+TGG | - | chr2_3:2159280-2159299 | Msa0270830:intron | 30.0% | |
| CTTGCTGAGAAAAAACATAT+TGG | - | chr2_3:2159428-2159447 | Msa0270830:intron | 30.0% | |
| TTTACTTCTTCCTTTATTCC+AGG | - | chr2_3:2159697-2159716 | Msa0270830:intron | 30.0% | |
| TTACTTCTTCCTTTATTCCA+GGG | - | chr2_3:2159698-2159717 | Msa0270830:intron | 30.0% | |
| ! | GAAATCGTTTATGCATTGAT+GGG | - | chr2_3:2159845-2159864 | Msa0270830:CDS | 30.0% |
| ! | AAATCGTTTATGCATTGATG+GGG | - | chr2_3:2159846-2159865 | Msa0270830:CDS | 30.0% |
| TTGAGATGGAATTCTTTCAT+TGG | - | chr2_3:2160061-2160080 | Msa0270830:intron | 30.0% | |
| TAAGTTCTTGAACGTGAATA+GGG | + | chr2_3:2160104-2160123 | None:intergenic | 30.0% | |
| TTAAGTTCTTGAACGTGAAT+AGG | + | chr2_3:2160105-2160124 | None:intergenic | 30.0% | |
| GTTCAAGAACTTAATCATTC+TGG | - | chr2_3:2160111-2160130 | Msa0270830:intron | 30.0% | |
| GTGTTATACAAAGATTGAGA+TGG | - | chr2_3:2160197-2160216 | Msa0270830:intron | 30.0% | |
| ! | AAGAGTAATAAACTTTAGGG+TGG | - | chr2_3:2160274-2160293 | Msa0270830:intron | 30.0% |
| GATTCTATTCAACAGCTAAT+TGG | - | chr2_3:2160398-2160417 | Msa0270830:intron | 30.0% | |
| AAATATTCATGCACTGTGAT+CGG | - | chr2_3:2160566-2160585 | Msa0270830:intron | 30.0% | |
| ATGCTAACTCACAAAATTCA+GGG | + | chr2_3:2160784-2160803 | None:intergenic | 30.0% | |
| TATGCTAACTCACAAAATTC+AGG | + | chr2_3:2160785-2160804 | None:intergenic | 30.0% | |
| !!! | CTTGAACTAGTTTTTCAACT+GGG | + | chr2_3:2160961-2160980 | None:intergenic | 30.0% |
| !!! | TCTTGAACTAGTTTTTCAAC+TGG | + | chr2_3:2160962-2160981 | None:intergenic | 30.0% |
| CATTGTACAATAGCACATTA+TGG | - | chr2_3:2161012-2161031 | Msa0270830:CDS | 30.0% | |
| CAATTATGCTACCCTTTAAA+TGG | - | chr2_3:2161069-2161088 | Msa0270830:CDS | 30.0% | |
| TAAGGTGATGTCCATTTAAA+GGG | + | chr2_3:2161083-2161102 | None:intergenic | 30.0% | |
| TTAAGGTGATGTCCATTTAA+AGG | + | chr2_3:2161084-2161103 | None:intergenic | 30.0% | |
| GACATCACCTTAATTATCAT+TGG | - | chr2_3:2161091-2161110 | Msa0270830:CDS | 30.0% | |
| ATCACCTTAATTATCATTGG+AGG | - | chr2_3:2161094-2161113 | Msa0270830:CDS | 30.0% | |
| TCACCTTAATTATCATTGGA+GGG | - | chr2_3:2161095-2161114 | Msa0270830:CDS | 30.0% | |
| ! | GTTTTATACCCTTAGAAGTT+AGG | + | chr2_3:2161133-2161152 | None:intergenic | 30.0% |
| ! | GCTTCTTGATTTTGTATTTG+GGG | - | chr2_3:2161421-2161440 | Msa0270830:exon | 30.0% |
| TTGGGGAAAATTGTAAACTA+AGG | - | chr2_3:2161438-2161457 | Msa0270830:five_prime_UTR | 30.0% | |
| TTGTAAACTAAGGAGACATT+TGG | - | chr2_3:2161448-2161467 | Msa0270830:five_prime_UTR | 30.0% | |
| AGAAACCAATCACAAAAGAG+AGG | - | chr2_3:2156684-2156703 | Msa0270830:three_prime_UTR | 35.0% | |
| AACGGTAATGTACAATGAGA+AGG | - | chr2_3:2157073-2157092 | Msa0270830:three_prime_UTR | 35.0% | |
| TACAATGAGAAGGAGAGAAT+TGG | - | chr2_3:2157083-2157102 | Msa0270830:three_prime_UTR | 35.0% | |
| AGATTCAACCTGATGTGATT+TGG | - | chr2_3:2157123-2157142 | Msa0270830:three_prime_UTR | 35.0% | |
| GATTCAACCTGATGTGATTT+GGG | - | chr2_3:2157124-2157143 | Msa0270830:three_prime_UTR | 35.0% | |
| GAGAGTGAAAGATATTGAAG+CGG | - | chr2_3:2157151-2157170 | Msa0270830:exon | 35.0% | |
| TGAAAGATATTGAAGCGGAA+CGG | - | chr2_3:2157156-2157175 | Msa0270830:exon | 35.0% | |
| CTTCTCTTTCCTTATCATCT+TGG | - | chr2_3:2157227-2157246 | Msa0270830:CDS | 35.0% | |
| ! | ATGCTTATCTAGAGTCTGTT+TGG | - | chr2_3:2157356-2157375 | Msa0270830:intron | 35.0% |
| ! | ACACCTTCAATTAGAAGTGT+CGG | - | chr2_3:2157529-2157548 | Msa0270830:intron | 35.0% |
| GTTTATCTAGGGATTCCAAT+CGG | - | chr2_3:2157928-2157947 | Msa0270830:intron | 35.0% | |
| TTTATCTAGGGATTCCAATC+GGG | - | chr2_3:2158008-2158027 | Msa0270830:intron | 35.0% | |
| ! | TTGACTCCGTATTTTCTTGT+TGG | - | chr2_3:2158175-2158194 | Msa0270830:intron | 35.0% |
| !!! | TAGTTTTGTGATGCATTTCC+AGG | - | chr2_3:2158293-2158312 | Msa0270830:CDS | 35.0% |
| ACTTCAAGCTCAAAGGATAA+GGG | + | chr2_3:2158547-2158566 | None:intergenic | 35.0% | |
| AGTTTCAACACATGGTAAAC+TGG | + | chr2_3:2158586-2158605 | None:intergenic | 35.0% | |
| ! | ACTTTTATTGGGGCAAACAT+AGG | - | chr2_3:2158615-2158634 | Msa0270830:intron | 35.0% |
| GCAAACATAGGTCAATTTCT+AGG | - | chr2_3:2158627-2158646 | Msa0270830:intron | 35.0% | |
| TTATTTCAGTTCTGTCTCCA+AGG | + | chr2_3:2158710-2158729 | None:intergenic | 35.0% | |
| !!! | CCTATCCATCAAGACTTTTT+TGG | + | chr2_3:2158754-2158773 | None:intergenic | 35.0% |
| ! | CCAAAAAAGTCTTGATGGAT+AGG | - | chr2_3:2158751-2158770 | Msa0270830:intron | 35.0% |
| ! | AAGTCTTGATGGATAGGATT+TGG | - | chr2_3:2158757-2158776 | Msa0270830:intron | 35.0% |
| TGCTTAAAAGGAGAAAAGAG+TGG | + | chr2_3:2158817-2158836 | None:intergenic | 35.0% | |
| TAGCTGTGATAATATGCATG+TGG | - | chr2_3:2159109-2159128 | Msa0270830:intron | 35.0% | |
| GATCTTATATGAACGTCATC+TGG | + | chr2_3:2159277-2159296 | None:intergenic | 35.0% | |
| GTAGAAAGAAAGACTTGAAC+TGG | - | chr2_3:2159364-2159383 | Msa0270830:intron | 35.0% | |
| CAGGACTTGAAAAACTTCTT+CGG | + | chr2_3:2159565-2159584 | None:intergenic | 35.0% | |
| ! | CAGAAGTACATATTACGACA+CGG | + | chr2_3:2159588-2159607 | None:intergenic | 35.0% |
| AACAAATCACCCTGGAATAA+AGG | + | chr2_3:2159710-2159729 | None:intergenic | 35.0% | |
| ACTATACTAACAAATCACCC+TGG | + | chr2_3:2159718-2159737 | None:intergenic | 35.0% | |
| AAAATCATCACATGAAACCG+AGG | + | chr2_3:2159745-2159764 | None:intergenic | 35.0% | |
| CGAAATCGTTTATGCATTGA+TGG | - | chr2_3:2159844-2159863 | Msa0270830:CDS | 35.0% | |
| ! | AATCGTTTATGCATTGATGG+GGG | - | chr2_3:2159847-2159866 | Msa0270830:CDS | 35.0% |
| CATTGGAATACTTGGTATCT+AGG | - | chr2_3:2160078-2160097 | Msa0270830:intron | 35.0% | |
| GTAAATGATGATTGCATGCT+TGG | - | chr2_3:2160141-2160160 | Msa0270830:intron | 35.0% | |
| !!! | AGGGTGGAAAATGCTTTTTT+AGG | - | chr2_3:2160290-2160309 | Msa0270830:intron | 35.0% |
| ! | TAGACGACTGATGAGTATTT+TGG | - | chr2_3:2160825-2160844 | Msa0270830:intron | 35.0% |
| TCAAGAATTACATCTTCTGC+TGG | + | chr2_3:2160887-2160906 | None:intergenic | 35.0% | |
| GATATCCAAACTCAAAGAGT+CGG | + | chr2_3:2160910-2160929 | None:intergenic | 35.0% | |
| ! | TTATGGATTGAAGATGCATG+AGG | - | chr2_3:2161029-2161048 | Msa0270830:CDS | 35.0% |
| TATTGCGATAGAATTCTTGC+TGG | - | chr2_3:2161186-2161205 | Msa0270830:CDS | 35.0% | |
| ATTGCGATAGAATTCTTGCT+GGG | - | chr2_3:2161187-2161206 | Msa0270830:CDS | 35.0% | |
| ATTTATAGCCAGTTTCCCTA+TGG | - | chr2_3:2161323-2161342 | Msa0270830:CDS | 35.0% | |
| CCATAACTTTGTCATCCATA+GGG | + | chr2_3:2161341-2161360 | None:intergenic | 35.0% | |
| GGTTAACGTCGTTAGTGAAA+CGG | + | chr2_3:2156842-2156861 | None:intergenic | 40.0% | |
| ! | AAGGATTTCTTTTCTTCCGG+CGG | + | chr2_3:2156951-2156970 | None:intergenic | 40.0% |
| ! | GCGAAGGATTTCTTTTCTTC+CGG | + | chr2_3:2156954-2156973 | None:intergenic | 40.0% |
| TATACCTAAGAAAAGCTCGC+CGG | + | chr2_3:2156985-2157004 | None:intergenic | 40.0% | |
| AGAAGAGTTGTAACTACTCC+TGG | - | chr2_3:2157182-2157201 | Msa0270830:CDS | 40.0% | |
| TGAGCAACACCAAGATGATA+AGG | + | chr2_3:2157239-2157258 | None:intergenic | 40.0% | |
| ! | CTTCTAATTGAAGGTGTGTC+TGG | + | chr2_3:2157526-2157545 | None:intergenic | 40.0% |
| AAACCACTTGTGAAGCAGTT+TGG | - | chr2_3:2157672-2157691 | Msa0270830:intron | 40.0% | |
| AACCACTTGTGAAGCAGTTT+GGG | - | chr2_3:2157673-2157692 | Msa0270830:intron | 40.0% | |
| GAGCCTATGAAAACAACTCA+TGG | - | chr2_3:2157697-2157716 | Msa0270830:intron | 40.0% | |
| !! | ACGCCATGAGTTGTTTTCAT+AGG | + | chr2_3:2157703-2157722 | None:intergenic | 40.0% |
| TAATTACATGAGCACCCGAT+TGG | + | chr2_3:2158025-2158044 | None:intergenic | 40.0% | |
| ! | TTGTGCACAGTATAGCTTGT+AGG | - | chr2_3:2158147-2158166 | Msa0270830:intron | 40.0% |
| TACTTTCAGGCCAAGTATAG+AGG | + | chr2_3:2158467-2158486 | None:intergenic | 40.0% | |
| TGTCAATGCTTGTTTGCTCA+TGG | - | chr2_3:2158520-2158539 | Msa0270830:CDS | 40.0% | |
| CACTTCAAGCTCAAAGGATA+AGG | + | chr2_3:2158548-2158567 | None:intergenic | 40.0% | |
| TATCCTTTGAGCTTGAAGTG+TGG | - | chr2_3:2158548-2158567 | Msa0270830:CDS | 40.0% | |
| TAACCACACTTCAAGCTCAA+AGG | + | chr2_3:2158554-2158573 | None:intergenic | 40.0% | |
| TTTGGGTCCCAAAATTCACA+AGG | + | chr2_3:2158736-2158755 | None:intergenic | 40.0% | |
| ! | TCTTGATGGATAGGATTTGG+TGG | - | chr2_3:2158760-2158779 | Msa0270830:intron | 40.0% |
| ! | CTTGATGGATAGGATTTGGT+GGG | - | chr2_3:2158761-2158780 | Msa0270830:intron | 40.0% |
| GGTTCGTGTTCATGTGATAA+GGG | - | chr2_3:2158782-2158801 | Msa0270830:intron | 40.0% | |
| GTTCGTGTTCATGTGATAAG+GGG | - | chr2_3:2158783-2158802 | Msa0270830:intron | 40.0% | |
| TTGCTGTAACACAGCTTCTT+TGG | - | chr2_3:2159614-2159633 | Msa0270830:intron | 40.0% | |
| ! | TGCATTGATGAGATCTTCCT+TGG | + | chr2_3:2159674-2159693 | None:intergenic | 40.0% |
| ! | AGATATCTGGAGGGAGTATA+AGG | + | chr2_3:2159799-2159818 | None:intergenic | 40.0% |
| ! | TTTGGTGCAAGATATCTGGA+GGG | + | chr2_3:2159808-2159827 | None:intergenic | 40.0% |
| AGTTACGTGGTTTCATGTTG+AGG | - | chr2_3:2160169-2160188 | Msa0270830:intron | 40.0% | |
| GTTACGTGGTTTCATGTTGA+GGG | - | chr2_3:2160170-2160189 | Msa0270830:intron | 40.0% | |
| AAAATTCAGGGATACCTGAC+GGG | + | chr2_3:2160772-2160791 | None:intergenic | 40.0% | |
| CAAAATTCAGGGATACCTGA+CGG | + | chr2_3:2160773-2160792 | None:intergenic | 40.0% | |
| ATATCTTGATGCTGCTGTCT+GGG | - | chr2_3:2160925-2160944 | Msa0270830:CDS | 40.0% | |
| !! | ACAATGCTATTTCCGAATGC+AGG | + | chr2_3:2160998-2161017 | None:intergenic | 40.0% |
| CCTCCCTCCAATGATAATTA+AGG | + | chr2_3:2161101-2161120 | None:intergenic | 40.0% | |
| CCTTAATTATCATTGGAGGG+AGG | - | chr2_3:2161098-2161117 | Msa0270830:CDS | 40.0% | |
| TCTGCAGTTCCTAACTTCTA+AGG | - | chr2_3:2161121-2161140 | Msa0270830:CDS | 40.0% | |
| CTGCAGTTCCTAACTTCTAA+GGG | - | chr2_3:2161122-2161141 | Msa0270830:CDS | 40.0% | |
| TTGCGATAGAATTCTTGCTG+GGG | - | chr2_3:2161188-2161207 | Msa0270830:CDS | 40.0% | |
| TTTGTCATCCATAGGGAAAC+TGG | + | chr2_3:2161334-2161353 | None:intergenic | 40.0% | |
| CCCTATGGATGACAAAGTTA+TGG | - | chr2_3:2161338-2161357 | Msa0270830:CDS | 40.0% | |
| GCCATAACTTTGTCATCCAT+AGG | + | chr2_3:2161342-2161361 | None:intergenic | 40.0% | |
| ! | ATGACGACTTTCCCTCGTTT+TGG | + | chr2_3:2156631-2156650 | None:intergenic | 45.0% |
| TCTTCTCCGTTCACGCAAAT+GGG | - | chr2_3:2156735-2156754 | Msa0270830:three_prime_UTR | 45.0% | |
| ATGCATCCCATTTGCGTGAA+CGG | + | chr2_3:2156744-2156763 | None:intergenic | 45.0% | |
| ATGAAGAAGGAGGAGATGGA+TGG | + | chr2_3:2156777-2156796 | None:intergenic | 45.0% | |
| ! | AACGGAAAGTGTGACGGTAA+CGG | + | chr2_3:2156818-2156837 | None:intergenic | 45.0% |
| ! | AACGGAAACGGAAAGTGTGA+CGG | + | chr2_3:2156824-2156843 | None:intergenic | 45.0% |
| CGTCGTTAGTGAAACGGAAA+CGG | + | chr2_3:2156836-2156855 | None:intergenic | 45.0% | |
| AATTGAATTGAGTGCGCGTG+GGG | + | chr2_3:2156875-2156894 | None:intergenic | 45.0% | |
| GAATTGAATTGAGTGCGCGT+GGG | + | chr2_3:2156876-2156895 | None:intergenic | 45.0% | |
| AGAATTGAATTGAGTGCGCG+TGG | + | chr2_3:2156877-2156896 | None:intergenic | 45.0% | |
| GAATTCTCGAACATCACCAC+CGG | + | chr2_3:2157041-2157060 | None:intergenic | 45.0% | |
| !! | GGAGAGAATTGGTGCTGTTA+TGG | - | chr2_3:2157094-2157113 | Msa0270830:three_prime_UTR | 45.0% |
| GCAGCAGAGAAACTAAAACC+AGG | + | chr2_3:2157203-2157222 | None:intergenic | 45.0% | |
| !!! | GGTTTTAGTTTCTCTGCTGC+TGG | - | chr2_3:2157203-2157222 | Msa0270830:CDS | 45.0% |
| ! | GCACCGACACTTCTAATTGA+AGG | + | chr2_3:2157535-2157554 | None:intergenic | 45.0% |
| !! | GTGCACAAGCATAACTTGCT+AGG | + | chr2_3:2158135-2158154 | None:intergenic | 45.0% |
| ATTGGCTGAAGATTGTCGGA+AGG | - | chr2_3:2158413-2158432 | Msa0270830:intron | 45.0% | |
| TTGGCTGAAGATTGTCGGAA+GGG | - | chr2_3:2158414-2158433 | Msa0270830:intron | 45.0% | |
| ! | CAACTACGCGAAGTACTTTC+AGG | + | chr2_3:2158480-2158499 | None:intergenic | 45.0% |
| !! | CTGAAAGTACTTCGCGTAGT+TGG | - | chr2_3:2158478-2158497 | Msa0270830:CDS | 45.0% |
| TACATTGCTGACGAGAACCT+TGG | - | chr2_3:2158690-2158709 | Msa0270830:intron | 45.0% | |
| GGGACCCAAAAAAGTCTTGA+TGG | - | chr2_3:2158746-2158765 | Msa0270830:intron | 45.0% | |
| GGGTTCGTGTTCATGTGATA+AGG | - | chr2_3:2158781-2158800 | Msa0270830:intron | 45.0% | |
| GGAGCTTATATGATGTGCAG+AGG | - | chr2_3:2159033-2159052 | Msa0270830:intron | 45.0% | |
| AGATCTAATGGGAGAGTTCG+AGG | - | chr2_3:2159292-2159311 | Msa0270830:intron | 45.0% | |
| AGTACATATTACGACACGGC+AGG | + | chr2_3:2159584-2159603 | None:intergenic | 45.0% | |
| GGTGGATCAGTTTGATTCCA+AGG | - | chr2_3:2159654-2159673 | Msa0270830:intron | 45.0% | |
| ! | CTTTGGTGCAAGATATCTGG+AGG | + | chr2_3:2159809-2159828 | None:intergenic | 45.0% |
| !! | TGGCTTTGGTGCAAGATATC+TGG | + | chr2_3:2159812-2159831 | None:intergenic | 45.0% |
| CGATTTCGAAACATCGTAGC+TGG | + | chr2_3:2159832-2159851 | None:intergenic | 45.0% | |
| ATGCTTGGTCACTAGTTACG+TGG | - | chr2_3:2160156-2160175 | Msa0270830:intron | 45.0% | |
| GTATGGGATTGCAAGGGATA+GGG | - | chr2_3:2160709-2160728 | Msa0270830:intron | 45.0% | |
| AAATTCAGGGATACCTGACG+GGG | + | chr2_3:2160771-2160790 | None:intergenic | 45.0% | |
| ! | CTTGACCGACTCTTTGAGTT+TGG | - | chr2_3:2160902-2160921 | Msa0270830:CDS | 45.0% |
| GATATCTTGATGCTGCTGTC+TGG | - | chr2_3:2160924-2160943 | Msa0270830:CDS | 45.0% | |
| GATACTACTGCTCCTGCATT+CGG | - | chr2_3:2160983-2161002 | Msa0270830:CDS | 45.0% | |
| TGCGATAGAATTCTTGCTGG+GGG | - | chr2_3:2161189-2161208 | Msa0270830:CDS | 45.0% | |
| !! | TTATTTAATATTTACAAAAT+AGG | - | chr2_3:2161245-2161264 | Msa0270830:CDS | 5.0% |
| !! | TATTTAATATTTACAAAATA+GGG | - | chr2_3:2161246-2161265 | Msa0270830:CDS | 5.0% |
| CATTTGCGTGAACGGAGAAG+AGG | + | chr2_3:2156736-2156755 | None:intergenic | 50.0% | |
| CTCTTCTCCGTTCACGCAAA+TGG | - | chr2_3:2156734-2156753 | Msa0270830:three_prime_UTR | 50.0% | |
| GTTCACGCAAATGGGATGCA+TGG | - | chr2_3:2156743-2156762 | Msa0270830:three_prime_UTR | 50.0% | |
| GGAGATGAAGAAGGAGGAGA+TGG | + | chr2_3:2156781-2156800 | None:intergenic | 50.0% | |
| TTGAGAGGGGGAGATGAAGA+AGG | + | chr2_3:2156790-2156809 | None:intergenic | 50.0% | |
| ! | GATTTCTTTTCTTCCGGCGG+AGG | + | chr2_3:2156948-2156967 | None:intergenic | 50.0% |
| CTCTGCTCCCAAATCACATC+AGG | + | chr2_3:2157134-2157153 | None:intergenic | 50.0% | |
| CTCCCAAACTGCTTCACAAG+TGG | + | chr2_3:2157678-2157697 | None:intergenic | 50.0% | |
| AGAAGAACCAGCTAATGGCG+TGG | + | chr2_3:2158322-2158341 | None:intergenic | 50.0% | |
| CCAGCAGAAGAACCAGCTAA+TGG | + | chr2_3:2158327-2158346 | None:intergenic | 50.0% | |
| ! | CCATTAGCTGGTTCTTCTGC+TGG | - | chr2_3:2158324-2158343 | Msa0270830:CDS | 50.0% |
| GTCTGTGCTGTAGTTGCTTC+TGG | - | chr2_3:2158354-2158373 | Msa0270830:CDS | 50.0% | |
| !! | AGTTGCTTCTGGAGCTAGCA+TGG | - | chr2_3:2158365-2158384 | Msa0270830:intron | 50.0% |
| TGGCTGAAGATTGTCGGAAG+GGG | - | chr2_3:2158415-2158434 | Msa0270830:intron | 50.0% | |
| ! | TGGGGGTATGCCTCTATACT+TGG | - | chr2_3:2158454-2158473 | Msa0270830:intron | 50.0% |
| ! | ACAGCTTCTTTGGAGACCCA+GGG | - | chr2_3:2159624-2159643 | Msa0270830:intron | 50.0% |
| TGATCCACCAACAAACCCCT+GGG | + | chr2_3:2159643-2159662 | None:intergenic | 50.0% | |
| ! | CGAAACATCGTAGCTGGCTT+TGG | + | chr2_3:2159826-2159845 | None:intergenic | 50.0% |
| ACCGACATCTGCAGCACAAA+CGG | - | chr2_3:2159888-2159907 | Msa0270830:intron | 50.0% | |
| ACCGTTTGTGCTGCAGATGT+CGG | + | chr2_3:2159892-2159911 | None:intergenic | 50.0% | |
| GTGGTTTCATGTTGAGGGCT+TGG | - | chr2_3:2160175-2160194 | Msa0270830:intron | 50.0% | |
| ! | CGTGTTTGTGCTTTTCCAGC+AGG | - | chr2_3:2160684-2160703 | Msa0270830:intron | 50.0% |
| ! | TGCTTTTCCAGCAGGTCGTA+TGG | - | chr2_3:2160692-2160711 | Msa0270830:intron | 50.0% |
| ! | GCTTTTCCAGCAGGTCGTAT+GGG | - | chr2_3:2160693-2160712 | Msa0270830:intron | 50.0% |
| CAGGTCGTATGGGATTGCAA+GGG | - | chr2_3:2160703-2160722 | Msa0270830:intron | 50.0% | |
| CGTATGGGATTGCAAGGGAT+AGG | - | chr2_3:2160708-2160727 | Msa0270830:intron | 50.0% | |
| GCGTTCTCGGGATTACAATC+TGG | + | chr2_3:2160741-2160760 | None:intergenic | 50.0% | |
| AATTCAGGGATACCTGACGG+GGG | + | chr2_3:2160770-2160789 | None:intergenic | 50.0% | |
| AATTCTTGCTGGGGGAGAAG+AGG | - | chr2_3:2161197-2161216 | Msa0270830:CDS | 50.0% | |
| ATTCTTGCTGGGGGAGAAGA+GGG | - | chr2_3:2161198-2161217 | Msa0270830:CDS | 50.0% | |
| ACGAGGGAAAGTCGTCATCG+AGG | - | chr2_3:2156633-2156652 | Msa0270830:three_prime_UTR | 55.0% | |
| AAGGAGGAGATGGATGGAGC+TGG | + | chr2_3:2156771-2156790 | None:intergenic | 55.0% | |
| AGAGGGGGAGATGAAGAAGG+AGG | + | chr2_3:2156787-2156806 | None:intergenic | 55.0% | |
| GTAACGGTGAGCTTGAGAGG+GGG | + | chr2_3:2156802-2156821 | None:intergenic | 55.0% | |
| ! | GGTAACGGTGAGCTTGAGAG+GGG | + | chr2_3:2156803-2156822 | None:intergenic | 55.0% |
| ! | CGGTAACGGTGAGCTTGAGA+GGG | + | chr2_3:2156804-2156823 | None:intergenic | 55.0% |
| ! | ACGGTAACGGTGAGCTTGAG+AGG | + | chr2_3:2156805-2156824 | None:intergenic | 55.0% |
| ! | GAGTGTTGTTGAACGCGTGG+TGG | + | chr2_3:2156900-2156919 | None:intergenic | 55.0% |
| !! | GTGGAGTGTTGTTGAACGCG+TGG | + | chr2_3:2156903-2156922 | None:intergenic | 55.0% |
| ! | TTCTTTTCTTCCGGCGGAGG+AGG | + | chr2_3:2156945-2156964 | None:intergenic | 55.0% |
| ACCTAAGAAAAGCTCGCCGG+TGG | + | chr2_3:2156982-2157001 | None:intergenic | 55.0% | |
| ! | CAACAGCCGTGAATCGACTC+CGG | - | chr2_3:2157019-2157038 | Msa0270830:three_prime_UTR | 55.0% |
| ! | TCACCACCGGAGTCGATTCA+CGG | + | chr2_3:2157028-2157047 | None:intergenic | 55.0% |
| CAGCTAATGGCGTGGTTTCC+TGG | + | chr2_3:2158314-2158333 | None:intergenic | 55.0% | |
| CAGGAAACCACGCCATTAGC+TGG | - | chr2_3:2158312-2158331 | Msa0270830:CDS | 55.0% | |
| GGCTGAAGATTGTCGGAAGG+GGG | - | chr2_3:2158416-2158435 | Msa0270830:intron | 55.0% | |
| GCTGAAGATTGTCGGAAGGG+GGG | - | chr2_3:2158417-2158436 | Msa0270830:intron | 55.0% | |
| CTGAAGATTGTCGGAAGGGG+GGG | - | chr2_3:2158418-2158437 | Msa0270830:intron | 55.0% | |
| ! | CACAGCTTCTTTGGAGACCC+AGG | - | chr2_3:2159623-2159642 | Msa0270830:intron | 55.0% |
| ! | CAGCTTCTTTGGAGACCCAG+GGG | - | chr2_3:2159625-2159644 | Msa0270830:intron | 55.0% |
| TTGGAGACCCAGGGGTTTGT+TGG | - | chr2_3:2159633-2159652 | Msa0270830:intron | 55.0% | |
| CTGATCCACCAACAAACCCC+TGG | + | chr2_3:2159644-2159663 | None:intergenic | 55.0% | |
| GTTTGTGCTGCAGATGTCGG+TGG | + | chr2_3:2159889-2159908 | None:intergenic | 55.0% | |
| TGCAATCCCATACGACCTGC+TGG | + | chr2_3:2160702-2160721 | None:intergenic | 55.0% | |
| GCAGGTCGTATGGGATTGCA+AGG | - | chr2_3:2160702-2160721 | Msa0270830:intron | 55.0% | |
| TGATGCTGCTGTCTGGGCAA+AGG | - | chr2_3:2160931-2160950 | Msa0270830:CDS | 55.0% | |
| TTCTTGCTGGGGGAGAAGAG+GGG | - | chr2_3:2161199-2161218 | Msa0270830:CDS | 55.0% | |
| AGGAGAGGGAGAAGGGGTTG+TGG | + | chr2_3:2156922-2156941 | None:intergenic | 60.0% | |
| AGGAGGAGGAGAGGGAGAAG+GGG | + | chr2_3:2156928-2156947 | None:intergenic | 60.0% | |
| GAGGAGGAGGAGAGGGAGAA+GGG | + | chr2_3:2156929-2156948 | None:intergenic | 60.0% | |
| ! | TTTTCTTCCGGCGGAGGAGG+AGG | + | chr2_3:2156942-2156961 | None:intergenic | 60.0% |
| AAATCCTTCGCCGTCGCCAC+CGG | - | chr2_3:2156963-2156982 | Msa0270830:three_prime_UTR | 60.0% | |
| ! | GCCACCGGCGAGCTTTTCTT+AGG | - | chr2_3:2156978-2156997 | Msa0270830:three_prime_UTR | 60.0% |
| GGAAGGGGGGGACTGCATTT+CGG | - | chr2_3:2158430-2158449 | Msa0270830:intron | 60.0% | |
| !! | GAGACCCAGGGGTTTGTTGG+TGG | - | chr2_3:2159636-2159655 | Msa0270830:intron | 60.0% |
| ACGGGGGCTAGATGCGTTCT+CGG | + | chr2_3:2160754-2160773 | None:intergenic | 60.0% | |
| TGCGCGTGGGGAGAAGAGTG+AGG | + | chr2_3:2156863-2156882 | None:intergenic | 65.0% | |
| GGAGGAGGAGGAGAGGGAGA+AGG | + | chr2_3:2156930-2156949 | None:intergenic | 65.0% | |
| GAAAAGCTCGCCGGTGGCGA+CGG | + | chr2_3:2156976-2156995 | None:intergenic | 65.0% | |
| ! | CAGCCGTGAATCGACTCCGG+TGG | - | chr2_3:2157022-2157041 | Msa0270830:three_prime_UTR | 65.0% |
| GGGGGGACTGCATTTCGGCT+GGG | - | chr2_3:2158435-2158454 | Msa0270830:intron | 65.0% | |
| GGGGGACTGCATTTCGGCTG+GGG | - | chr2_3:2158436-2158455 | Msa0270830:intron | 65.0% | |
| GGGGACTGCATTTCGGCTGG+GGG | - | chr2_3:2158437-2158456 | Msa0270830:intron | 65.0% | |
| CGGGGGCTAGATGCGTTCTC+GGG | + | chr2_3:2160753-2160772 | None:intergenic | 65.0% | |
| GAACGCATCTAGCCCCCGTC+AGG | - | chr2_3:2160755-2160774 | Msa0270830:intron | 65.0% | |
| TCCCTCTCCTCCTCCTCCGC+CGG | - | chr2_3:2156932-2156951 | Msa0270830:three_prime_UTR | 70.0% | |
| TCCGGCGGAGGAGGAGGAGA+GGG | + | chr2_3:2156936-2156955 | None:intergenic | 70.0% | |
| TTCCGGCGGAGGAGGAGGAG+AGG | + | chr2_3:2156937-2156956 | None:intergenic | 70.0% | |
| GGGGGGGACTGCATTTCGGC+TGG | - | chr2_3:2158434-2158453 | Msa0270830:intron | 70.0% | |
| ! | CTCGCCGGTGGCGACGGCGA+AGG | + | chr2_3:2156970-2156989 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 2156628 | 2161559 | 2156628 | ID=Msa0270830;Name=Msa0270830 |
| chr2_3 | mRNA | 2156628 | 2161559 | 2156628 | ID=Msa0270830-mRNA-1;Parent=Msa0270830;Name=Msa0270830-mRNA-1;_AED=0.05;_eAED=0.05;_QI=125|1|1|1|1|1|7|535|403 |
| chr2_3 | exon | 2156628 | 2157324 | 2156628 | ID=Msa0270830-mRNA-1:exon:1057;Parent=Msa0270830-mRNA-1 |
| chr2_3 | exon | 2157411 | 2157506 | 2157411 | ID=Msa0270830-mRNA-1:exon:1056;Parent=Msa0270830-mRNA-1 |
| chr2_3 | exon | 2158278 | 2158374 | 2158278 | ID=Msa0270830-mRNA-1:exon:1055;Parent=Msa0270830-mRNA-1 |
| chr2_3 | exon | 2158468 | 2158573 | 2158468 | ID=Msa0270830-mRNA-1:exon:1054;Parent=Msa0270830-mRNA-1 |
| chr2_3 | exon | 2158874 | 2158946 | 2158874 | ID=Msa0270830-mRNA-1:exon:1053;Parent=Msa0270830-mRNA-1 |
| chr2_3 | exon | 2159729 | 2159872 | 2159729 | ID=Msa0270830-mRNA-1:exon:1052;Parent=Msa0270830-mRNA-1 |
| chr2_3 | exon | 2160901 | 2161559 | 2160901 | ID=Msa0270830-mRNA-1:exon:1051;Parent=Msa0270830-mRNA-1 |
| chr2_3 | five_prime_UTR | 2161435 | 2161559 | 2161435 | ID=Msa0270830-mRNA-1:five_prime_utr;Parent=Msa0270830-mRNA-1 |
| chr2_3 | CDS | 2160901 | 2161434 | 2160901 | ID=Msa0270830-mRNA-1:cds;Parent=Msa0270830-mRNA-1 |
| chr2_3 | CDS | 2159729 | 2159872 | 2159729 | ID=Msa0270830-mRNA-1:cds;Parent=Msa0270830-mRNA-1 |
| chr2_3 | CDS | 2158874 | 2158946 | 2158874 | ID=Msa0270830-mRNA-1:cds;Parent=Msa0270830-mRNA-1 |
| chr2_3 | CDS | 2158468 | 2158573 | 2158468 | ID=Msa0270830-mRNA-1:cds;Parent=Msa0270830-mRNA-1 |
| chr2_3 | CDS | 2158278 | 2158374 | 2158278 | ID=Msa0270830-mRNA-1:cds;Parent=Msa0270830-mRNA-1 |
| chr2_3 | CDS | 2157411 | 2157506 | 2157411 | ID=Msa0270830-mRNA-1:cds;Parent=Msa0270830-mRNA-1 |
| chr2_3 | CDS | 2157163 | 2157324 | 2157163 | ID=Msa0270830-mRNA-1:cds;Parent=Msa0270830-mRNA-1 |
| chr2_3 | three_prime_UTR | 2156628 | 2157162 | 2156628 | ID=Msa0270830-mRNA-1:three_prime_utr;Parent=Msa0270830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
