Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0390730 | XP_003616595.1 | 78.638 | 323 | 11 | 2 | 1 | 265 | 1 | 323 | 2.14e-168 | 478 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0390730 | sp|P50346|RLA0_SOYBN | 69.592 | 319 | 40 | 2 | 1 | 262 | 1 | 319 | 9.83e-143 | 406 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0390730 | G7KGX1 | 78.638 | 323 | 11 | 2 | 1 | 265 | 1 | 323 | 1.02e-168 | 478 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0390730 | 0.801472 | 8.861266e-49 | -8.615850e-47 |
| Msa0003720 | Msa0390730 | 0.838764 | 2.369607e-57 | -8.615850e-47 |
| Msa0003890 | Msa0390730 | 0.817051 | 4.028768e-52 | -8.615850e-47 |
| Msa0006110 | Msa0390730 | 0.856529 | 3.026007e-62 | -8.615850e-47 |
| Msa0006380 | Msa0390730 | 0.823679 | 1.216332e-53 | -8.615850e-47 |
| Msa0017510 | Msa0390730 | 0.814184 | 1.753582e-51 | -8.615850e-47 |
| Msa0026430 | Msa0390730 | 0.830379 | 3.035773e-55 | -8.615850e-47 |
| Msa0026910 | Msa0390730 | 0.810856 | 9.359393e-51 | -8.615850e-47 |
| Msa0027230 | Msa0390730 | 0.802556 | 5.303734e-49 | -8.615850e-47 |
| Msa0027260 | Msa0390730 | 0.837854 | 4.065509e-57 | -8.615850e-47 |
| Msa0028420 | Msa0390730 | 0.823860 | 1.103564e-53 | -8.615850e-47 |
| Msa0029630 | Msa0390730 | 0.803850 | 2.863399e-49 | -8.615850e-47 |
| Msa0032090 | Msa0390730 | 0.808002 | 3.836714e-50 | -8.615850e-47 |
| Msa0032430 | Msa0390730 | 0.807179 | 5.736499e-50 | -8.615850e-47 |
| Msa0032920 | Msa0390730 | -0.800639 | 1.311497e-48 | -8.615850e-47 |
| Msa0040690 | Msa0390730 | 0.826807 | 2.215293e-54 | -8.615850e-47 |
| Msa0045490 | Msa0390730 | 0.815939 | 7.150844e-52 | -8.615850e-47 |
| Msa0051630 | Msa0390730 | 0.804889 | 1.739321e-49 | -8.615850e-47 |
| Msa0051750 | Msa0390730 | 0.807092 | 5.984844e-50 | -8.615850e-47 |
| Msa0052680 | Msa0390730 | 0.832107 | 1.141521e-55 | -8.615850e-47 |
| Msa0052730 | Msa0390730 | 0.826085 | 3.292407e-54 | -8.615850e-47 |
| Msa0054440 | Msa0390730 | 0.817834 | 2.684625e-52 | -8.615850e-47 |
| Msa0054480 | Msa0390730 | 0.838562 | 2.671825e-57 | -8.615850e-47 |
| Msa0059040 | Msa0390730 | 0.810620 | 1.053080e-50 | -8.615850e-47 |
| Msa0059110 | Msa0390730 | 0.841504 | 4.565436e-58 | -8.615850e-47 |
| Msa0061340 | Msa0390730 | 0.807206 | 5.659561e-50 | -8.615850e-47 |
| Msa0070700 | Msa0390730 | 0.806362 | 8.535814e-50 | -8.615850e-47 |
| Msa0075220 | Msa0390730 | 0.802838 | 4.638942e-49 | -8.615850e-47 |
| Msa0079380 | Msa0390730 | 0.815414 | 9.359685e-52 | -8.615850e-47 |
| Msa0079920 | Msa0390730 | 0.812531 | 4.046560e-51 | -8.615850e-47 |
| Msa0084380 | Msa0390730 | 0.817620 | 2.999691e-52 | -8.615850e-47 |
| Msa0090360 | Msa0390730 | 0.843201 | 1.621305e-58 | -8.615850e-47 |
| Msa0094470 | Msa0390730 | 0.807270 | 5.486773e-50 | -8.615850e-47 |
| Msa0112770 | Msa0390730 | 0.811845 | 5.710490e-51 | -8.615850e-47 |
| Msa0115400 | Msa0390730 | 0.800702 | 1.273047e-48 | -8.615850e-47 |
| Msa0124060 | Msa0390730 | 0.807962 | 3.912291e-50 | -8.615850e-47 |
| Msa0125450 | Msa0390730 | 0.807564 | 4.752627e-50 | -8.615850e-47 |
| Msa0125540 | Msa0390730 | 0.803521 | 3.350465e-49 | -8.615850e-47 |
| Msa0127020 | Msa0390730 | 0.803658 | 3.138199e-49 | -8.615850e-47 |
| Msa0128860 | Msa0390730 | 0.801664 | 8.094546e-49 | -8.615850e-47 |
| Msa0137840 | Msa0390730 | 0.822727 | 2.028938e-53 | -8.615850e-47 |
| Msa0140820 | Msa0390730 | 0.812331 | 4.473322e-51 | -8.615850e-47 |
| Msa0144370 | Msa0390730 | 0.801025 | 1.093941e-48 | -8.615850e-47 |
| Msa0146280 | Msa0390730 | 0.832684 | 8.216350e-56 | -8.615850e-47 |
| Msa0152400 | Msa0390730 | 0.809713 | 1.651708e-50 | -8.615850e-47 |
| Msa0157290 | Msa0390730 | 0.814690 | 1.354957e-51 | -8.615850e-47 |
| Msa0168500 | Msa0390730 | 0.807916 | 4.000157e-50 | -8.615850e-47 |
| Msa0169280 | Msa0390730 | 0.808758 | 2.646323e-50 | -8.615850e-47 |
| Msa0172070 | Msa0390730 | 0.804778 | 1.834548e-49 | -8.615850e-47 |
| Msa0173070 | Msa0390730 | 0.808518 | 2.978375e-50 | -8.615850e-47 |
| Msa0174730 | Msa0390730 | 0.802639 | 5.098509e-49 | -8.615850e-47 |
| Msa0182620 | Msa0390730 | -0.804289 | 2.319816e-49 | -8.615850e-47 |
| Msa0184040 | Msa0390730 | 0.841499 | 4.579410e-58 | -8.615850e-47 |
| Msa0187120 | Msa0390730 | 0.823115 | 1.647808e-53 | -8.615850e-47 |
| Msa0188350 | Msa0390730 | 0.818890 | 1.547461e-52 | -8.615850e-47 |
| Msa0188690 | Msa0390730 | 0.802587 | 5.228224e-49 | -8.615850e-47 |
| Msa0189300 | Msa0390730 | 0.810252 | 1.264547e-50 | -8.615850e-47 |
| Msa0197930 | Msa0390730 | 0.811774 | 5.916498e-51 | -8.615850e-47 |
| Msa0204960 | Msa0390730 | 0.803083 | 4.129227e-49 | -8.615850e-47 |
| Msa0205230 | Msa0390730 | 0.832162 | 1.106210e-55 | -8.615850e-47 |
| Msa0216240 | Msa0390730 | 0.805827 | 1.105976e-49 | -8.615850e-47 |
| Msa0220740 | Msa0390730 | 0.830577 | 2.714880e-55 | -8.615850e-47 |
| Msa0231980 | Msa0390730 | 0.826939 | 2.059729e-54 | -8.615850e-47 |
| Msa0232050 | Msa0390730 | 0.810609 | 1.058571e-50 | -8.615850e-47 |
| Msa0376310 | Msa0390730 | 0.809290 | 2.036081e-50 | -8.615850e-47 |
| Msa0385580 | Msa0390730 | 0.837402 | 5.309845e-57 | -8.615850e-47 |
| Msa0388700 | Msa0390730 | 0.816467 | 5.446806e-52 | -8.615850e-47 |
| Msa0388950 | Msa0390730 | 0.815083 | 1.108740e-51 | -8.615850e-47 |
| Msa0390730 | Msa0392510 | 0.809928 | 1.484636e-50 | -8.615850e-47 |
| Msa0390730 | Msa0395820 | 0.840524 | 8.258390e-58 | -8.615850e-47 |
| Msa0390730 | Msa0402790 | 0.821239 | 4.488911e-53 | -8.615850e-47 |
| Msa0390730 | Msa0410650 | 0.810286 | 1.243163e-50 | -8.615850e-47 |
| Msa0390730 | Msa0410870 | 0.815766 | 7.813472e-52 | -8.615850e-47 |
| Msa0390730 | Msa0411430 | 0.807000 | 6.257937e-50 | -8.615850e-47 |
| Msa0390730 | Msa0419410 | 0.806053 | 9.914039e-50 | -8.615850e-47 |
| Msa0390730 | Msa0422840 | 0.810433 | 1.155387e-50 | -8.615850e-47 |
| Msa0390730 | Msa0422920 | 0.811979 | 5.340024e-51 | -8.615850e-47 |
| Msa0390730 | Msa0481530 | 0.815009 | 1.151341e-51 | -8.615850e-47 |
| Msa0390730 | Msa0484780 | 0.804353 | 2.250143e-49 | -8.615850e-47 |
| Msa0390730 | Msa0484840 | 0.824460 | 7.974462e-54 | -8.615850e-47 |
| Msa0390730 | Msa0493410 | 0.827003 | 1.988250e-54 | -8.615850e-47 |
| Msa0390730 | Msa0497210 | 0.808315 | 3.290649e-50 | -8.615850e-47 |
| Msa0390730 | Msa0516170 | 0.803959 | 2.717140e-49 | -8.615850e-47 |
| Msa0390730 | Msa0524500 | 0.806870 | 6.667249e-50 | -8.615850e-47 |
| Msa0390730 | Msa0529890 | 0.820769 | 5.758458e-53 | -8.615850e-47 |
| Msa0390730 | Msa0532070 | 0.817588 | 3.049934e-52 | -8.615850e-47 |
| Msa0390730 | Msa0542090 | 0.807208 | 5.656085e-50 | -8.615850e-47 |
| Msa0390730 | Msa0542130 | 0.805830 | 1.104636e-49 | -8.615850e-47 |
| Msa0390730 | Msa0547720 | 0.802835 | 4.645127e-49 | -8.615850e-47 |
| Msa0390730 | Msa0549470 | 0.800248 | 1.575837e-48 | -8.615850e-47 |
| Msa0390730 | Msa0556060 | 0.840096 | 1.068219e-57 | -8.615850e-47 |
| Msa0390730 | Msa0557070 | 0.834200 | 3.438819e-56 | -8.615850e-47 |
| Msa0390730 | Msa0569200 | 0.837138 | 6.203113e-57 | -8.615850e-47 |
| Msa0390730 | Msa0581110 | 0.805690 | 1.181909e-49 | -8.615850e-47 |
| Msa0390730 | Msa0585560 | 0.827442 | 1.561353e-54 | -8.615850e-47 |
| Msa0390730 | Msa0610840 | -0.824183 | 9.264968e-54 | -8.615850e-47 |
| Msa0390730 | Msa0615440 | 0.807676 | 4.499160e-50 | -8.615850e-47 |
| Msa0390730 | Msa0625720 | 0.817221 | 3.690647e-52 | -8.615850e-47 |
| Msa0390730 | Msa0663390 | 0.823532 | 1.316678e-53 | -8.615850e-47 |
| Msa0390730 | Msa0679710 | 0.802112 | 6.546252e-49 | -8.615850e-47 |
| Msa0390730 | Msa0689260 | 0.847976 | 8.222537e-60 | -8.615850e-47 |
| Msa0390730 | Msa0691290 | 0.804897 | 1.732748e-49 | -8.615850e-47 |
| Msa0390730 | Msa0692040 | -0.817709 | 2.864334e-52 | -8.615850e-47 |
| Msa0390730 | Msa0695130 | 0.806774 | 6.985179e-50 | -8.615850e-47 |
| Msa0390730 | Msa0698490 | 0.806459 | 8.140416e-50 | -8.615850e-47 |
| Msa0390730 | Msa0698660 | 0.806079 | 9.789906e-50 | -8.615850e-47 |
| Msa0390730 | Msa0709160 | 0.819640 | 1.044736e-52 | -8.615850e-47 |
| Msa0390730 | Msa0711780 | 0.847061 | 1.467485e-59 | -8.615850e-47 |
| Msa0390730 | Msa0715700 | 0.823873 | 1.095298e-53 | -8.615850e-47 |
| Msa0390730 | Msa0716830 | 0.800105 | 1.684372e-48 | -8.615850e-47 |
| Msa0390730 | Msa0721280 | 0.801871 | 7.337266e-49 | -8.615850e-47 |
| Msa0390730 | Msa0730430 | 0.801381 | 9.250501e-49 | -8.615850e-47 |
| Msa0390730 | Msa0731940 | 0.802429 | 5.634812e-49 | -8.615850e-47 |
| Msa0390730 | Msa0738440 | 0.814771 | 1.300138e-51 | -8.615850e-47 |
| Msa0390730 | Msa0741840 | 0.800225 | 1.592470e-48 | -8.615850e-47 |
| Msa0390730 | Msa0745790 | 0.818990 | 1.469259e-52 | -8.615850e-47 |
| Msa0390730 | Msa0749290 | 0.807109 | 5.933624e-50 | -8.615850e-47 |
| Msa0390730 | Msa0750880 | 0.838246 | 3.223580e-57 | -8.615850e-47 |
| Msa0390730 | Msa0764300 | 0.815026 | 1.141572e-51 | -8.615850e-47 |
| Msa0390730 | Msa0765240 | 0.828778 | 7.438694e-55 | -8.615850e-47 |
| Msa0390730 | Msa0777990 | 0.801037 | 1.087495e-48 | -8.615850e-47 |
| Msa0390730 | Msa0786270 | 0.820250 | 7.575538e-53 | -8.615850e-47 |
| Msa0390730 | Msa0790400 | 0.813474 | 2.513764e-51 | -8.615850e-47 |
| Msa0390730 | Msa0790660 | -0.802026 | 6.819539e-49 | -8.615850e-47 |
| Msa0390730 | Msa0793800 | 0.820438 | 6.860219e-53 | -8.615850e-47 |
| Msa0390730 | Msa0794670 | 0.841303 | 5.157835e-58 | -8.615850e-47 |
| Msa0390730 | Msa0794730 | 0.801595 | 8.359760e-49 | -8.615850e-47 |
| Msa0390730 | Msa0802830 | 0.812661 | 3.789861e-51 | -8.615850e-47 |
| Msa0390730 | Msa0803890 | 0.801542 | 8.573656e-49 | -8.615850e-47 |
| Msa0390730 | Msa0808270 | 0.806891 | 6.601012e-50 | -8.615850e-47 |
| Msa0390730 | Msa0816710 | 0.823140 | 1.625725e-53 | -8.615850e-47 |
| Msa0390730 | Msa0820850 | 0.816450 | 5.496959e-52 | -8.615850e-47 |
| Msa0390730 | Msa0830540 | 0.808745 | 2.662464e-50 | -8.615850e-47 |
| Msa0390730 | Msa0831530 | 0.830951 | 2.198286e-55 | -8.615850e-47 |
| Msa0390730 | Msa0832340 | 0.822240 | 2.633945e-53 | -8.615850e-47 |
| Msa0390730 | Msa0835960 | 0.800322 | 1.521820e-48 | -8.615850e-47 |
| Msa0390730 | Msa0858130 | 0.804454 | 2.143262e-49 | -8.615850e-47 |
| Msa0390730 | Msa0861130 | 0.817677 | 2.912286e-52 | -8.615850e-47 |
| Msa0390730 | Msa0861510 | 0.815056 | 1.124246e-51 | -8.615850e-47 |
| Msa0390730 | Msa0861600 | 0.822891 | 1.858410e-53 | -8.615850e-47 |
| Msa0390730 | Msa0866520 | 0.806901 | 6.566897e-50 | -8.615850e-47 |
| Msa0390730 | Msa0876190 | 0.800039 | 1.737834e-48 | -8.615850e-47 |
| Msa0390730 | Msa0880140 | 0.808895 | 2.473768e-50 | -8.615850e-47 |
| Msa0390730 | Msa0902760 | 0.830295 | 3.182687e-55 | -8.615850e-47 |
| Msa0390730 | Msa0908920 | -0.804593 | 2.005315e-49 | -8.615850e-47 |
| Msa0390730 | Msa0945110 | 0.817483 | 3.222049e-52 | -8.615850e-47 |
| Msa0390730 | Msa0959360 | 0.806124 | 9.577057e-50 | -8.615850e-47 |
| Msa0390730 | Msa0963270 | 0.806112 | 9.635598e-50 | -8.615850e-47 |
| Msa0390730 | Msa0968590 | 0.819139 | 1.358654e-52 | -8.615850e-47 |
| Msa0390730 | Msa0970530 | 0.812689 | 3.736217e-51 | -8.615850e-47 |
| Msa0390730 | Msa0970600 | 0.802861 | 4.588652e-49 | -8.615850e-47 |
| Msa0390730 | Msa0974070 | 0.803956 | 2.721488e-49 | -8.615850e-47 |
| Msa0390730 | Msa0983320 | -0.804922 | 1.711551e-49 | -8.615850e-47 |
| Msa0390730 | Msa0983500 | -0.809421 | 1.908052e-50 | -8.615850e-47 |
| Msa0390730 | Msa1005990 | 0.826686 | 2.367555e-54 | -8.615850e-47 |
| Msa0390730 | Msa1006840 | 0.822950 | 1.800310e-53 | -8.615850e-47 |
| Msa0390730 | Msa1013400 | 0.831761 | 1.389618e-55 | -8.615850e-47 |
| Msa0390730 | Msa1048160 | 0.819480 | 1.135913e-52 | -8.615850e-47 |
| Msa0390730 | Msa1048920 | 0.805366 | 1.382169e-49 | -8.615850e-47 |
| Msa0390730 | Msa1075650 | 0.818769 | 1.649251e-52 | -8.615850e-47 |
| Msa0390730 | Msa1078170 | 0.817306 | 3.531536e-52 | -8.615850e-47 |
| Msa0390730 | Msa1081930 | 0.841841 | 3.719195e-58 | -8.615850e-47 |
| Msa0390730 | Msa1085200 | 0.811034 | 8.566239e-51 | -8.615850e-47 |
| Msa0390730 | Msa1088640 | 0.807977 | 3.883661e-50 | -8.615850e-47 |
| Msa0390730 | Msa1093530 | 0.833449 | 5.299723e-56 | -8.615850e-47 |
| Msa0390730 | Msa1093840 | 0.814785 | 1.290980e-51 | -8.615850e-47 |
| Msa0390730 | Msa1100050 | 0.807507 | 4.886104e-50 | -8.615850e-47 |
| Msa0390730 | Msa1101090 | 0.805997 | 1.018597e-49 | -8.615850e-47 |
| Msa0390730 | Msa1104140 | 0.814659 | 1.376638e-51 | -8.615850e-47 |
| Msa0390730 | Msa1106700 | 0.801080 | 1.065793e-48 | -8.615850e-47 |
| Msa0390730 | Msa1109680 | 0.822551 | 2.229717e-53 | -8.615850e-47 |
| Msa0390730 | Msa1123380 | 0.832878 | 7.350117e-56 | -8.615850e-47 |
| Msa0390730 | Msa1128600 | 0.844908 | 5.646937e-59 | -8.615850e-47 |
| Msa0390730 | Msa1135470 | 0.847973 | 8.239784e-60 | -8.615850e-47 |
| Msa0390730 | Msa1137570 | 0.819502 | 1.122727e-52 | -8.615850e-47 |
| Msa0390730 | Msa1147900 | 0.825856 | 3.731465e-54 | -8.615850e-47 |
| Msa0390730 | Msa1160590 | 0.825285 | 5.094791e-54 | -8.615850e-47 |
| Msa0390730 | Msa1165940 | 0.821206 | 4.567631e-53 | -8.615850e-47 |
| Msa0390730 | Msa1173100 | 0.835700 | 1.440549e-56 | -8.615850e-47 |
| Msa0390730 | Msa1181250 | 0.815260 | 1.012767e-51 | -8.615850e-47 |
| Msa0390730 | Msa1181330 | 0.804388 | 2.212684e-49 | -8.615850e-47 |
| Msa0390730 | Msa1189070 | 0.823608 | 1.264121e-53 | -8.615850e-47 |
| Msa0390730 | Msa1193290 | 0.835161 | 1.971556e-56 | -8.615850e-47 |
| Msa0390730 | Msa1199570 | 0.836109 | 1.134155e-56 | -8.615850e-47 |
| Msa0390730 | Msa1207270 | 0.829154 | 6.033139e-55 | -8.615850e-47 |
| Msa0390730 | Msa1208880 | 0.834447 | 2.981574e-56 | -8.615850e-47 |
| Msa0390730 | Msa1209460 | 0.808633 | 2.814314e-50 | -8.615850e-47 |
| Msa0390730 | Msa1209760 | 0.800186 | 1.621686e-48 | -8.615850e-47 |
| Msa0390730 | Msa1218600 | 0.814285 | 1.665554e-51 | -8.615850e-47 |
| Msa0390730 | Msa1219010 | 0.834190 | 3.458877e-56 | -8.615850e-47 |
| Msa0390730 | Msa1221060 | 0.820547 | 6.473743e-53 | -8.615850e-47 |
| Msa0390730 | Msa1228620 | -0.807070 | 6.047627e-50 | -8.615850e-47 |
| Msa0390730 | Msa1245930 | 0.832408 | 9.617120e-56 | -8.615850e-47 |
| Msa0390730 | Msa1251160 | 0.805741 | 1.153314e-49 | -8.615850e-47 |
| Msa0390730 | Msa1253020 | 0.811682 | 6.196082e-51 | -8.615850e-47 |
| Msa0390730 | Msa1254730 | 0.813587 | 2.373219e-51 | -8.615850e-47 |
| Msa0390730 | Msa1259060 | 0.827712 | 1.344314e-54 | -8.615850e-47 |
| Msa0390730 | Msa1276660 | 0.827212 | 1.771889e-54 | -8.615850e-47 |
| Msa0390730 | Msa1284550 | 0.814330 | 1.628080e-51 | -8.615850e-47 |
| Msa0390730 | Msa1303240 | 0.806346 | 8.601524e-50 | -8.615850e-47 |
| Msa0390730 | Msa1303250 | 0.825547 | 4.416555e-54 | -8.615850e-47 |
| Msa0390730 | Msa1313140 | 0.815010 | 1.150521e-51 | -8.615850e-47 |
| Msa0390730 | Msa1328640 | 0.818092 | 2.347174e-52 | -8.615850e-47 |
| Msa0390730 | Msa1328710 | 0.843265 | 1.558606e-58 | -8.615850e-47 |
| Msa0390730 | Msa1333480 | 0.805375 | 1.375940e-49 | -8.615850e-47 |
| Msa0390730 | Msa1336570 | 0.801516 | 8.679821e-49 | -8.615850e-47 |
| Msa0390730 | Msa1336710 | 0.802766 | 4.801887e-49 | -8.615850e-47 |
| Msa0390730 | Msa1342900 | 0.807774 | 4.288033e-50 | -8.615850e-47 |
| Msa0390730 | Msa1353060 | 0.830637 | 2.625313e-55 | -8.615850e-47 |
| Msa0390730 | Msa1353470 | 0.831041 | 2.090412e-55 | -8.615850e-47 |
| Msa0390730 | Msa1358250 | 0.845821 | 3.197173e-59 | -8.615850e-47 |
| Msa0390730 | Msa1359040 | 0.805979 | 1.027434e-49 | -8.615850e-47 |
| Msa0390730 | Msa1361400 | 0.815372 | 9.563476e-52 | -8.615850e-47 |
| Msa0390730 | Msa1361410 | 0.818677 | 1.730000e-52 | -8.615850e-47 |
| Msa0390730 | Msa1367590 | 0.814343 | 1.617171e-51 | -8.615850e-47 |
| Msa0390730 | Msa1369150 | 0.800486 | 1.409337e-48 | -8.615850e-47 |
| Msa0390730 | Msa1371640 | 0.821967 | 3.047193e-53 | -8.615850e-47 |
| Msa0390730 | Msa1374060 | 0.832567 | 8.783069e-56 | -8.615850e-47 |
| Msa0390730 | Msa1374120 | 0.803917 | 2.773398e-49 | -8.615850e-47 |
| Msa0390730 | Msa1375840 | 0.820361 | 7.145052e-53 | -8.615850e-47 |
| Msa0390730 | Msa1376200 | 0.805316 | 1.415747e-49 | -8.615850e-47 |
| Msa0390730 | Msa1381350 | 0.825376 | 4.848616e-54 | -8.615850e-47 |
| Msa0390730 | Msa1382560 | 0.852678 | 3.943031e-61 | -8.615850e-47 |
| Msa0390730 | Msa1382620 | 0.809632 | 1.718929e-50 | -8.615850e-47 |
| Msa0390730 | Msa1386780 | 0.805201 | 1.496383e-49 | -8.615850e-47 |
| Msa0390730 | Msa1392010 | -0.801266 | 9.765640e-49 | -8.615850e-47 |
| Msa0390730 | Msa1392780 | 0.851783 | 7.084894e-61 | -8.615850e-47 |
| Msa0390730 | Msa1394290 | 0.824144 | 9.463146e-54 | -8.615850e-47 |
| Msa0390730 | Msa1398090 | 0.807606 | 4.657004e-50 | -8.615850e-47 |
| Msa0390730 | Msa1400580 | 0.820688 | 6.009227e-53 | -8.615850e-47 |
| Msa0390730 | Msa1406430 | 0.997670 | 7.343314e-247 | -8.615850e-47 |
| Msa0390730 | Msa1419870 | 0.817321 | 3.503358e-52 | -8.615850e-47 |
| Msa0390730 | Msa1423350 | 0.820333 | 7.250075e-53 | -8.615850e-47 |
| Msa0390730 | Msa1423870 | 0.807548 | 4.790629e-50 | -8.615850e-47 |
| Msa0390730 | Msa1433390 | 0.832554 | 8.847785e-56 | -8.615850e-47 |
| Msa0390730 | Msa1442210 | 0.802782 | 4.765589e-49 | -8.615850e-47 |
| Msa0390730 | Msa1443300 | 0.828945 | 6.777659e-55 | -8.615850e-47 |
| Msa0390730 | Msa1448640 | 0.823883 | 1.089401e-53 | -8.615850e-47 |
| Msa0390730 | Msa1451160 | 0.839974 | 1.149232e-57 | -8.615850e-47 |
| Msa0390730 | Msa1457920 | 0.835085 | 2.060793e-56 | -8.615850e-47 |
| Msa0390730 | Msa1466540 | 0.840958 | 6.353815e-58 | -8.615850e-47 |
| Msa0249580 | Msa0390730 | 0.819530 | 1.106466e-52 | -8.615850e-47 |
| Msa0253200 | Msa0390730 | 0.805332 | 1.404780e-49 | -8.615850e-47 |
| Msa0254790 | Msa0390730 | 0.801546 | 8.558278e-49 | -8.615850e-47 |
| Msa0255090 | Msa0390730 | 0.808747 | 2.660382e-50 | -8.615850e-47 |
| Msa0257460 | Msa0390730 | 0.819736 | 9.931551e-53 | -8.615850e-47 |
| Msa0258310 | Msa0390730 | 0.804254 | 2.360002e-49 | -8.615850e-47 |
| Msa0259380 | Msa0390730 | 0.804540 | 2.057049e-49 | -8.615850e-47 |
| Msa0262340 | Msa0390730 | 0.822674 | 2.087269e-53 | -8.615850e-47 |
| Msa0270320 | Msa0390730 | 0.834399 | 3.064892e-56 | -8.615850e-47 |
| Msa0271530 | Msa0390730 | 0.844367 | 7.899420e-59 | -8.615850e-47 |
| Msa0280610 | Msa0390730 | 0.803160 | 3.980811e-49 | -8.615850e-47 |
| Msa0281530 | Msa0390730 | 0.800997 | 1.108319e-48 | -8.615850e-47 |
| Msa0288080 | Msa0390730 | 0.802712 | 4.924592e-49 | -8.615850e-47 |
| Msa0292030 | Msa0390730 | 0.807948 | 3.938210e-50 | -8.615850e-47 |
| Msa0296740 | Msa0390730 | 0.816447 | 5.503283e-52 | -8.615850e-47 |
| Msa0297790 | Msa0390730 | 0.803412 | 3.530322e-49 | -8.615850e-47 |
| Msa0299870 | Msa0390730 | 0.804618 | 1.981288e-49 | -8.615850e-47 |
| Msa0307850 | Msa0390730 | 0.839574 | 1.460366e-57 | -8.615850e-47 |
| Msa0309750 | Msa0390730 | 0.829711 | 4.417593e-55 | -8.615850e-47 |
| Msa0317280 | Msa0390730 | 0.803581 | 3.256500e-49 | -8.615850e-47 |
| Msa0317730 | Msa0390730 | 0.806574 | 7.699562e-50 | -8.615850e-47 |
| Msa0326480 | Msa0390730 | 0.832929 | 7.139215e-56 | -8.615850e-47 |
| Msa0333030 | Msa0390730 | 0.805054 | 1.606240e-49 | -8.615850e-47 |
| Msa0334360 | Msa0390730 | 0.822007 | 2.981960e-53 | -8.615850e-47 |
| Msa0335800 | Msa0390730 | 0.805205 | 1.493916e-49 | -8.615850e-47 |
| Msa0337620 | Msa0390730 | 0.825673 | 4.122883e-54 | -8.615850e-47 |
| Msa0339500 | Msa0390730 | 0.808485 | 3.026617e-50 | -8.615850e-47 |
| Msa0341540 | Msa0390730 | 0.804134 | 2.498783e-49 | -8.615850e-47 |
| Msa0357900 | Msa0390730 | 0.807631 | 4.600036e-50 | -8.615850e-47 |
| Msa0359030 | Msa0390730 | 0.803901 | 2.793760e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0390730 | MtrunA17_Chr5g0436791 | 78.638 | 323 | 11 | 2 | 1 | 265 | 1 | 323 | 1.97e-172 | 478 |
| Msa0390730 | MtrunA17_Chr3g0138631 | 73.375 | 323 | 28 | 2 | 1 | 265 | 1 | 323 | 3.76e-152 | 427 |
| Msa0390730 | MtrunA17_Chr7g0222411 | 67.308 | 104 | 33 | 1 | 11 | 113 | 7 | 110 | 1.12e-41 | 141 |
| Msa0390730 | MtrunA17_Chr7g0272291 | 67.416 | 89 | 28 | 1 | 11 | 98 | 7 | 95 | 3.24e-34 | 119 |
| Msa0390730 | MtrunA17_Chr3g0115971 | 51.724 | 116 | 34 | 2 | 63 | 177 | 8 | 102 | 2.84e-22 | 90.1 |
| Msa0390730 | MtrunA17_Chr1g0168061 | 66.667 | 81 | 17 | 1 | 195 | 265 | 1 | 81 | 1.18e-19 | 80.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0390730 | AT2G40010.1 | 67.508 | 317 | 49 | 2 | 1 | 263 | 1 | 317 | 8.35e-139 | 393 |
| Msa0390730 | AT3G09200.1 | 70.909 | 275 | 32 | 1 | 4 | 230 | 3 | 277 | 4.74e-134 | 381 |
| Msa0390730 | AT3G11250.1 | 70.545 | 275 | 33 | 1 | 4 | 230 | 3 | 277 | 2.23e-133 | 380 |
| Msa0390730 | AT3G09200.2 | 60.000 | 275 | 29 | 2 | 4 | 230 | 3 | 244 | 3.68e-104 | 304 |
Find 88 sgRNAs with CRISPR-Local
Find 336 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTGATTCGGTTGTTCTTA+TGG | 0.196398 | 3_2:-1800718 | Msa0390730:CDS |
| TTCTCGGCTTTGGTTGGTTT+TGG | 0.243035 | 3_2:+1800858 | None:intergenic |
| CTCCCATACCTCTTTCTTCC+AGG | 0.272769 | 3_2:-1800460 | Msa0390730:CDS |
| TCTGATGAGGACATTGGTTT+TGG | 0.301112 | 3_2:-1797242 | Msa0390730:CDS |
| CCCTTCTTGATGAGTTCAAC+AGG | 0.305313 | 3_2:+1800387 | None:intergenic |
| ATCGTAAGCTTGTTTCTTCT+CGG | 0.312192 | 3_2:+1800842 | None:intergenic |
| GGTGATTCGGTTGTTCTTAT+GGG | 0.317103 | 3_2:-1800717 | Msa0390730:CDS |
| TCCTCATCAGATTCTTCTTC+GGG | 0.318279 | 3_2:+1797254 | None:intergenic |
| AGCTTGTTTCTTCTCGGCTT+TGG | 0.324216 | 3_2:+1800848 | None:intergenic |
| GTCCTCATCAGATTCTTCTT+CGG | 0.343197 | 3_2:+1797253 | None:intergenic |
| AATGGTTACTTCACTTTCCT+TGG | 0.348671 | 3_2:-1797474 | Msa0390730:CDS |
| AACCTTATCCCTCTCCTTGT+TGG | 0.367087 | 3_2:-1800627 | Msa0390730:CDS |
| GACCTCCTTGAGGTCTCCTT+TGG | 0.367672 | 3_2:+1800584 | None:intergenic |
| TTCTTCTTCGGGCTCCTCAT+TGG | 0.367790 | 3_2:+1797265 | None:intergenic |
| GGGTCAGGCCCTCTGTTGCC+AGG | 0.369168 | 3_2:+1800483 | None:intergenic |
| CCCTCTCCTTGTTGGAAATG+TGG | 0.387613 | 3_2:-1800619 | Msa0390730:CDS |
| AGCTCCTGCTCGTGTTGGTT+TGG | 0.398892 | 3_2:-1800532 | Msa0390730:CDS |
| TCCTTAACCTTGTCAGCCTC+AGG | 0.406863 | 3_2:+1797356 | None:intergenic |
| CCCTGAGGCTGACAAGGTTA+AGG | 0.407662 | 3_2:-1797357 | Msa0390730:CDS |
| CCTCTCCTTGTTGGAAATGT+GGG | 0.418166 | 3_2:-1800618 | Msa0390730:CDS |
| GGAGGGACAACAACATCAAT+TGG | 0.422188 | 3_2:+1800504 | None:intergenic |
| AGTACCCTTGTTAATCTTTG+TGG | 0.438446 | 3_2:+1800425 | None:intergenic |
| TGGTGGTTTACGTGGTGATT+CGG | 0.441475 | 3_2:-1800730 | Msa0390730:CDS |
| GTACCCTTGTTAATCTTTGT+GGG | 0.449524 | 3_2:+1800426 | None:intergenic |
| GAGGATGCACGCTGAGAAAA+CGG | 0.456339 | 3_2:-1800667 | Msa0390730:CDS |
| GCAGCTACAACAAACTTACT+TGG | 0.458337 | 3_2:+1797320 | None:intergenic |
| TTCCAACAAGGAGAGGGATA+AGG | 0.459106 | 3_2:+1800625 | None:intergenic |
| ATTGATGTTGTTGTCCCTCC+TGG | 0.461091 | 3_2:-1800501 | Msa0390730:CDS |
| CAAGGTTAAGGAGTTCTTGA+AGG | 0.472691 | 3_2:-1797345 | Msa0390730:CDS |
| AAAGAGGTATGGGAGGGGTC+AGG | 0.472711 | 3_2:+1800468 | None:intergenic |
| AGGAGCTCCAACCTTGTACT+TGG | 0.478120 | 3_2:+1800548 | None:intergenic |
| AGGATGCACGCTGAGAAAAC+GGG | 0.480723 | 3_2:-1800666 | Msa0390730:CDS |
| TGTTTCTTCTCGGCTTTGGT+TGG | 0.480748 | 3_2:+1800852 | None:intergenic |
| CAGGCCCTCTGTTGCCAGGA+GGG | 0.481238 | 3_2:+1800487 | None:intergenic |
| CTTGTTGTGAAGTTTGCCAT+TGG | 0.485339 | 3_2:-1797503 | Msa0390730:intron |
| CAGCAGCAGAAACATCAGTC+AGG | 0.493719 | 3_2:+1797288 | None:intergenic |
| TTCTTTCCCTGAGGCTGACA+AGG | 0.513735 | 3_2:-1797363 | Msa0390730:CDS |
| GTTTGCCATTGGTGTCTCAA+TGG | 0.515161 | 3_2:-1797492 | Msa0390730:CDS |
| GTTGGAGCTCCTGCTCGTGT+TGG | 0.519504 | 3_2:-1800537 | Msa0390730:CDS |
| GCAACCAAACCAACACGAGC+AGG | 0.521300 | 3_2:+1800528 | None:intergenic |
| TTGTCCCTCCTGGCAACAGA+GGG | 0.525369 | 3_2:-1800491 | Msa0390730:CDS |
| GAGTGAATTCATCTAGAAGC+TGG | 0.530076 | 3_2:+1800808 | None:intergenic |
| AACCAGCTTCAGAATATTCG+TGG | 0.543257 | 3_2:-1800750 | Msa0390730:CDS |
| CCCTGTTGAACTCATCAAGA+AGG | 0.543687 | 3_2:-1800388 | Msa0390730:CDS |
| GCACCTGGAAGAAAGAGGTA+TGG | 0.548566 | 3_2:+1800457 | None:intergenic |
| TCAGGCCCTCTGTTGCCAGG+AGG | 0.549469 | 3_2:+1800486 | None:intergenic |
| AATATTCGTGGTGGTTTACG+TGG | 0.555191 | 3_2:-1800738 | Msa0390730:CDS |
| TTGTGGGAATGTTGAGCACC+TGG | 0.555236 | 3_2:+1800442 | None:intergenic |
| TGAAGAGGTTGCCAAGTACA+AGG | 0.559975 | 3_2:-1800559 | Msa0390730:CDS |
| GAAGAATCTGATGAGGACAT+TGG | 0.561710 | 3_2:-1797248 | Msa0390730:CDS |
| GAGGTTGCCAAGTACAAGGT+TGG | 0.563956 | 3_2:-1800555 | Msa0390730:CDS |
| CACCTGGAAGAAAGAGGTAT+GGG | 0.565173 | 3_2:+1800458 | None:intergenic |
| GTGATTCGGTTGTTCTTATG+GGG | 0.567097 | 3_2:-1800716 | Msa0390730:CDS |
| CACCACGAATATTCTGAAGC+TGG | 0.570820 | 3_2:+1800748 | None:intergenic |
| AGCAGCAGAAACATCAGTCA+GGG | 0.574191 | 3_2:+1797289 | None:intergenic |
| ATTGTTAATGCTGATAACGT+TGG | 0.574787 | 3_2:-1800777 | Msa0390730:CDS |
| TGAGGTGCAGCAGCGAGTGT+TGG | 0.574957 | 3_2:+1797440 | None:intergenic |
| CATTCCCACAAAGATTAACA+AGG | 0.575244 | 3_2:-1800430 | Msa0390730:CDS |
| GTTGTCCCTCCTGGCAACAG+AGG | 0.582415 | 3_2:-1800492 | Msa0390730:CDS |
| CCTGTTGAACTCATCAAGAA+GGG | 0.586555 | 3_2:-1800387 | Msa0390730:CDS |
| AGCCTCAGGGAAAGAATACT+CGG | 0.591842 | 3_2:+1797370 | None:intergenic |
| CCTCAAGGAGGTCAGTGAAG+AGG | 0.593760 | 3_2:-1800574 | Msa0390730:CDS |
| AGCGAGTGTTGGATAAGAGA+TGG | 0.594113 | 3_2:+1797451 | None:intergenic |
| GTTGAGCACCTGGAAGAAAG+AGG | 0.596639 | 3_2:+1800452 | None:intergenic |
| CCTCTTCACTGACCTCCTTG+AGG | 0.596985 | 3_2:+1800574 | None:intergenic |
| TGTTTCTGCTGCTGCCAATG+AGG | 0.598910 | 3_2:-1797279 | Msa0390730:CDS |
| CAGCTACAACAAACTTACTT+GGG | 0.601933 | 3_2:+1797321 | None:intergenic |
| TGGAAGAAAGAGGTATGGGA+GGG | 0.613861 | 3_2:+1800462 | None:intergenic |
| CCTTCTTGATGAGTTCAACA+GGG | 0.614444 | 3_2:+1800388 | None:intergenic |
| TTTCACCAAAGGAGACCTCA+AGG | 0.617367 | 3_2:-1800589 | Msa0390730:CDS |
| CCTTAACCTTGTCAGCCTCA+GGG | 0.620363 | 3_2:+1797357 | None:intergenic |
| CCACATTTCCAACAAGGAGA+GGG | 0.620458 | 3_2:+1800619 | None:intergenic |
| CTGGAAGAAAGAGGTATGGG+AGG | 0.624147 | 3_2:+1800461 | None:intergenic |
| GGAAGAAAGAGGTATGGGAG+GGG | 0.635124 | 3_2:+1800463 | None:intergenic |
| CCCACATTTCCAACAAGGAG+AGG | 0.636584 | 3_2:+1800618 | None:intergenic |
| GCCCGAAGAAGAATCTGATG+AGG | 0.637782 | 3_2:-1797255 | Msa0390730:CDS |
| CAGCTTCAGAATATTCGTGG+TGG | 0.652956 | 3_2:-1800747 | Msa0390730:CDS |
| ACTCATCAAGAAGGGAGACA+AGG | 0.673191 | 3_2:-1800379 | Msa0390730:intron |
| GGATGCACGCTGAGAAAACG+GGG | 0.678918 | 3_2:-1800665 | Msa0390730:CDS |
| TCAAACCCACATTTCCAACA+AGG | 0.684557 | 3_2:+1800613 | None:intergenic |
| AACCGAGTATTCTTTCCCTG+AGG | 0.686463 | 3_2:-1797372 | Msa0390730:CDS |
| CTTCTTGATGAGTTCAACAG+GGG | 0.687686 | 3_2:+1800389 | None:intergenic |
| TGTTGGATAAGAGATGGCCA+AGG | 0.692916 | 3_2:+1797457 | None:intergenic |
| AGTAACCATTGAGACACCAA+TGG | 0.697332 | 3_2:+1797487 | None:intergenic |
| ATTCCCACAAAGATTAACAA+GGG | 0.700399 | 3_2:-1800429 | Msa0390730:CDS |
| TATGCATTCACGAACATGTG+AGG | 0.724385 | 3_2:+1797422 | None:intergenic |
| CACCAAAGGAGACCTCAAGG+AGG | 0.756266 | 3_2:-1800586 | Msa0390730:CDS |
| CTATGATGAAGAGATCTGTG+AGG | 0.762423 | 3_2:-1800686 | Msa0390730:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGAATATTTATATGTTTTT+TGG | + | chr3_2:1800313-1800332 | None:intergenic | 10.0% |
| !!! | TATATGATGATCTTTTAAAA+GGG | + | chr3_2:1799248-1799267 | None:intergenic | 15.0% |
| !!! | AATATTTATATGTTTTTTGG+TGG | + | chr3_2:1800310-1800329 | None:intergenic | 15.0% |
| !! | TTATATTAGACAAGAATTGT+TGG | + | chr3_2:1797932-1797951 | None:intergenic | 20.0% |
| !! | AATCATAATCATAACATACA+TGG | - | chr3_2:1798521-1798540 | Msa0390730:intron | 20.0% |
| !!! | CATTATCTTGATTCATTTTA+CGG | - | chr3_2:1798587-1798606 | Msa0390730:intron | 20.0% |
| !! | TTAATATGTTTAGTAATGCT+TGG | + | chr3_2:1799201-1799220 | None:intergenic | 20.0% |
| !!! | CTATATGATGATCTTTTAAA+AGG | + | chr3_2:1799249-1799268 | None:intergenic | 20.0% |
| !!! | CTTTTAAAAGATCATCATAT+AGG | - | chr3_2:1799247-1799266 | Msa0390730:intron | 20.0% |
| !! | TTTAACATATTTAGTATGCA+TGG | - | chr3_2:1799607-1799626 | Msa0390730:intron | 20.0% |
| !! | TGAAAACTATTAAAAGTCTA+GGG | + | chr3_2:1799665-1799684 | None:intergenic | 20.0% |
| !! | ATGAAAACTATTAAAAGTCT+AGG | + | chr3_2:1799666-1799685 | None:intergenic | 20.0% |
| !! | AATGGAAAATATTTATCATG+AGG | + | chr3_2:1800414-1800433 | None:intergenic | 20.0% |
| ! | CTTATTTGTTTCAGATAAAC+AGG | + | chr3_2:1798048-1798067 | None:intergenic | 25.0% |
| !! | CTGTTTATCTGAAACAAATA+AGG | - | chr3_2:1798046-1798065 | Msa0390730:intron | 25.0% |
| !! | TATCTGAAACAAATAAGGAT+TGG | - | chr3_2:1798051-1798070 | Msa0390730:intron | 25.0% |
| !! | ATCTGAAACAAATAAGGATT+GGG | - | chr3_2:1798052-1798071 | Msa0390730:intron | 25.0% |
| !!! | AATACCATTTTTACAAGTTC+TGG | + | chr3_2:1799498-1799517 | None:intergenic | 25.0% |
| ! | GGATTATCAAGTTTATGTTA+AGG | + | chr3_2:1799749-1799768 | None:intergenic | 25.0% |
| ! | GAAAGAAGTAATATGAAGAA+TGG | + | chr3_2:1799839-1799858 | None:intergenic | 25.0% |
| ! | TCATATTACTTCTTTCTCTT+TGG | - | chr3_2:1799843-1799862 | Msa0390730:intron | 25.0% |
| !!! | TATTTTGGAATCAAGAGTTA+GGG | + | chr3_2:1799935-1799954 | None:intergenic | 25.0% |
| !!! | TTATTTTGGAATCAAGAGTT+AGG | + | chr3_2:1799936-1799955 | None:intergenic | 25.0% |
| ! | ATTGTTAATGCTGATAACGT+TGG | - | chr3_2:1797310-1797329 | Msa0390730:CDS | 30.0% |
| ATTCCCACAAAGATTAACAA+GGG | - | chr3_2:1797658-1797677 | Msa0390730:intron | 30.0% | |
| ACAACAAGTCCATATGAAAA+TGG | + | chr3_2:1797778-1797797 | None:intergenic | 30.0% | |
| TTTCTAGATACGTCTAGTAT+GGG | + | chr3_2:1797805-1797824 | None:intergenic | 30.0% | |
| TTTGTTTCAGATAAACAGGT+TGG | + | chr3_2:1798044-1798063 | None:intergenic | 30.0% | |
| TCACTGAATAAACAAGATGT+AGG | + | chr3_2:1798784-1798803 | None:intergenic | 30.0% | |
| TTGTTTATTCAGTGACATGT+GGG | - | chr3_2:1798789-1798808 | Msa0390730:intron | 30.0% | |
| CATGACTTATATAAAGTAGG+TGG | + | chr3_2:1798887-1798906 | None:intergenic | 30.0% | |
| CACCTACTTTATATAAGTCA+TGG | - | chr3_2:1798885-1798904 | Msa0390730:intron | 30.0% | |
| GACCATGACTTATATAAAGT+AGG | + | chr3_2:1798890-1798909 | None:intergenic | 30.0% | |
| AGCAAGTTATTCTTAAGCAA+GGG | + | chr3_2:1799140-1799159 | None:intergenic | 30.0% | |
| TAGCAAGTTATTCTTAAGCA+AGG | + | chr3_2:1799141-1799160 | None:intergenic | 30.0% | |
| AATGCAAGAGAATCAAACTA+GGG | + | chr3_2:1799800-1799819 | None:intergenic | 30.0% | |
| ATCAAGCAAGAAACAACTAT+GGG | + | chr3_2:1799977-1799996 | None:intergenic | 30.0% | |
| AATCAAGCAAGAAACAACTA+TGG | + | chr3_2:1799978-1799997 | None:intergenic | 30.0% | |
| TTATGTTGAACATGCTTCAT+GGG | + | chr3_2:1800008-1800027 | None:intergenic | 30.0% | |
| !!! | AGGCTTTAGATTGTTGTTTT+GGG | + | chr3_2:1800034-1800053 | None:intergenic | 30.0% |
| !!! | AAGGCTTTAGATTGTTGTTT+TGG | + | chr3_2:1800035-1800054 | None:intergenic | 30.0% |
| ! | AGAGATTCAAATCTAAGGTT+TGG | + | chr3_2:1800074-1800093 | None:intergenic | 30.0% |
| CATGAAGAGATTCAAATCTA+AGG | + | chr3_2:1800079-1800098 | None:intergenic | 30.0% | |
| GATTTGAATCTCTTCATGAA+AGG | - | chr3_2:1800081-1800100 | Msa0390730:intron | 30.0% | |
| ACAAGAAAATATGATTGCCA+TGG | - | chr3_2:1800160-1800179 | Msa0390730:intron | 30.0% | |
| TTGGAGAAAGAAAAAGAGAA+AGG | - | chr3_2:1800202-1800221 | Msa0390730:intron | 30.0% | |
| TGGAGAAAGAAAAAGAGAAA+GGG | - | chr3_2:1800203-1800222 | Msa0390730:intron | 30.0% | |
| TACGGATAAAATATCAGTGT+CGG | + | chr3_2:1800380-1800399 | None:intergenic | 30.0% | |
| GTTCATGGAAAGTAAGTTAA+TGG | + | chr3_2:1800432-1800451 | None:intergenic | 30.0% | |
| TGTTAGAGGATTAAAGTTCA+TGG | + | chr3_2:1800447-1800466 | None:intergenic | 30.0% | |
| CGATTGTCTGATAAAAATTC+CGG | - | chr3_2:1800467-1800486 | Msa0390730:CDS | 30.0% | |
| ! | ATCGTAAGCTTGTTTCTTCT+CGG | + | chr3_2:1797248-1797267 | None:intergenic | 35.0% |
| CATTCCCACAAAGATTAACA+AGG | - | chr3_2:1797657-1797676 | Msa0390730:intron | 35.0% | |
| GTACCCTTGTTAATCTTTGT+GGG | + | chr3_2:1797664-1797683 | None:intergenic | 35.0% | |
| AGTACCCTTGTTAATCTTTG+TGG | + | chr3_2:1797665-1797684 | None:intergenic | 35.0% | |
| CTTTCTAGATACGTCTAGTA+TGG | + | chr3_2:1797806-1797825 | None:intergenic | 35.0% | |
| TACCTATAGCCTAGGATTTA+GGG | + | chr3_2:1798104-1798123 | None:intergenic | 35.0% | |
| TTACCTATAGCCTAGGATTT+AGG | + | chr3_2:1798105-1798124 | None:intergenic | 35.0% | |
| !! | GGCTCATCTTAACTTGTTAT+AGG | - | chr3_2:1798232-1798251 | Msa0390730:intron | 35.0% |
| ATCATAAACATAGTCGTGCA+TGG | - | chr3_2:1798498-1798517 | Msa0390730:intron | 35.0% | |
| CTTGTTTATTCAGTGACATG+TGG | - | chr3_2:1798788-1798807 | Msa0390730:intron | 35.0% | |
| ATACAAGGGGTTCTCATTAT+GGG | + | chr3_2:1798836-1798855 | None:intergenic | 35.0% | |
| GTAAACAAGCAAGCATGATT+AGG | + | chr3_2:1798934-1798953 | None:intergenic | 35.0% | |
| AGTATGAGTTTACCGCTAAT+CGG | + | chr3_2:1798975-1798994 | None:intergenic | 35.0% | |
| AAGATCATCATATAGGACCT+TGG | - | chr3_2:1799254-1799273 | Msa0390730:intron | 35.0% | |
| CAGTCCAGAACTTGTAAAAA+TGG | - | chr3_2:1799491-1799510 | Msa0390730:intron | 35.0% | |
| !! | ACACTTGGTTTGAGGTTTTT+GGG | + | chr3_2:1799526-1799545 | None:intergenic | 35.0% |
| CCAAAATACTTAGAGACACT+TGG | + | chr3_2:1799541-1799560 | None:intergenic | 35.0% | |
| ! | CCAAGTGTCTCTAAGTATTT+TGG | - | chr3_2:1799538-1799557 | Msa0390730:intron | 35.0% |
| TTAGTATGCATGGCAAGAAA+AGG | - | chr3_2:1799617-1799636 | Msa0390730:intron | 35.0% | |
| AGACATAATCATGATCCCAA+AGG | - | chr3_2:1799698-1799717 | Msa0390730:intron | 35.0% | |
| GACATAATCATGATCCCAAA+GGG | - | chr3_2:1799699-1799718 | Msa0390730:intron | 35.0% | |
| !!! | GTTTTGATTGCTTGAGCTTA+GGG | + | chr3_2:1799778-1799797 | None:intergenic | 35.0% |
| GAATGCAAGAGAATCAAACT+AGG | + | chr3_2:1799801-1799820 | None:intergenic | 35.0% | |
| GTTTGATTCTCTTGCATTCT+TGG | - | chr3_2:1799802-1799821 | Msa0390730:intron | 35.0% | |
| GCATGAAGTGGTTTCTTTAT+AGG | + | chr3_2:1799875-1799894 | None:intergenic | 35.0% | |
| ! | GATGGAAGTTGGGTTTATTT+TGG | + | chr3_2:1799950-1799969 | None:intergenic | 35.0% |
| TATGTTGAACATGCTTCATG+GGG | + | chr3_2:1800007-1800026 | None:intergenic | 35.0% | |
| CTTATGTTGAACATGCTTCA+TGG | + | chr3_2:1800009-1800028 | None:intergenic | 35.0% | |
| ACTAAGCTTCCATAAGTTAG+AGG | - | chr3_2:1800126-1800145 | Msa0390730:intron | 35.0% | |
| CTTCATGATCCTCTAACTTA+TGG | + | chr3_2:1800138-1800157 | None:intergenic | 35.0% | |
| CATAAGTTAGAGGATCATGA+AGG | - | chr3_2:1800136-1800155 | Msa0390730:intron | 35.0% | |
| GAAAATATGATTGCCATGGA+AGG | - | chr3_2:1800164-1800183 | Msa0390730:intron | 35.0% | |
| AAGGAGAATTAGAGAAGGAT+TGG | - | chr3_2:1800183-1800202 | Msa0390730:intron | 35.0% | |
| GGAGAAAGAAAAAGAGAAAG+GGG | - | chr3_2:1800204-1800223 | Msa0390730:intron | 35.0% | |
| TATCCTTTCTCTCTCTATGT+TGG | + | chr3_2:1800268-1800287 | None:intergenic | 35.0% | |
| ACATAGAGAGAGAAAGGATA+AGG | - | chr3_2:1800268-1800287 | Msa0390730:intron | 35.0% | |
| CATAGAGAGAGAAAGGATAA+GGG | - | chr3_2:1800269-1800288 | Msa0390730:intron | 35.0% | |
| TTATCAGACAATCGTGTTAG+AGG | + | chr3_2:1800461-1800480 | None:intergenic | 35.0% | |
| AATGGTTACTTCACTTTCCT+TGG | - | chr3_2:1800613-1800632 | Msa0390730:CDS | 35.0% | |
| CAGCTACAACAAACTTACTT+GGG | + | chr3_2:1800769-1800788 | None:intergenic | 35.0% | |
| !!! | GACATTGGTTTTGGTCTTTT+TGG | - | chr3_2:1800854-1800873 | Msa0390730:CDS | 35.0% |
| GAGTGAATTCATCTAGAAGC+TGG | + | chr3_2:1797282-1797301 | None:intergenic | 40.0% | |
| AACCAGCTTCAGAATATTCG+TGG | - | chr3_2:1797337-1797356 | Msa0390730:CDS | 40.0% | |
| AATATTCGTGGTGGTTTACG+TGG | - | chr3_2:1797349-1797368 | Msa0390730:CDS | 40.0% | |
| !! | TGGTGATTCGGTTGTTCTTA+TGG | - | chr3_2:1797369-1797388 | Msa0390730:CDS | 40.0% |
| !! | GGTGATTCGGTTGTTCTTAT+GGG | - | chr3_2:1797370-1797389 | Msa0390730:CDS | 40.0% |
| !! | GTGATTCGGTTGTTCTTATG+GGG | - | chr3_2:1797371-1797390 | Msa0390730:CDS | 40.0% |
| CTATGATGAAGAGATCTGTG+AGG | - | chr3_2:1797401-1797420 | Msa0390730:CDS | 40.0% | |
| TCAAACCCACATTTCCAACA+AGG | + | chr3_2:1797477-1797496 | None:intergenic | 40.0% | |
| !! | GTGGGTTTGATTTTCACCAA+AGG | - | chr3_2:1797487-1797506 | Msa0390730:CDS | 40.0% |
| CTTCTTGATGAGTTCAACAG+GGG | + | chr3_2:1797701-1797720 | None:intergenic | 40.0% | |
| CCTTCTTGATGAGTTCAACA+GGG | + | chr3_2:1797702-1797721 | None:intergenic | 40.0% | |
| CCTGTTGAACTCATCAAGAA+GGG | - | chr3_2:1797700-1797719 | Msa0390730:intron | 40.0% | |
| ! | GGCATCAGACCATTTTCATA+TGG | - | chr3_2:1797766-1797785 | Msa0390730:intron | 40.0% |
| ! | CATGGTGATTACGGATTACA+CGG | + | chr3_2:1797966-1797985 | None:intergenic | 40.0% |
| ACCTATAGCCTAGGATTTAG+GGG | + | chr3_2:1798103-1798122 | None:intergenic | 40.0% | |
| ACACACGTATAATCAACCGT+CGG | + | chr3_2:1798170-1798189 | None:intergenic | 40.0% | |
| ACTTCCTATACGTGTCATGA+CGG | - | chr3_2:1798259-1798278 | Msa0390730:intron | 40.0% | |
| GCCTAAGCATAACATAGTCA+TGG | - | chr3_2:1798332-1798351 | Msa0390730:intron | 40.0% | |
| GCCATGACTATGTTATGCTT+AGG | + | chr3_2:1798336-1798355 | None:intergenic | 40.0% | |
| GTCATGGCATGATTCTAAAC+CGG | - | chr3_2:1798348-1798367 | Msa0390730:intron | 40.0% | |
| TGATTCTAAACCGGACGATT+AGG | - | chr3_2:1798357-1798376 | Msa0390730:intron | 40.0% | |
| GATTCTAAACCGGACGATTA+GGG | - | chr3_2:1798358-1798377 | Msa0390730:intron | 40.0% | |
| ATTCTAAACCGGACGATTAG+GGG | - | chr3_2:1798359-1798378 | Msa0390730:intron | 40.0% | |
| !! | TTAGTTTTCCCCTAATCGTC+CGG | + | chr3_2:1798370-1798389 | None:intergenic | 40.0% |
| TCATGTATGGGATTGTTCTC+GGG | + | chr3_2:1798633-1798652 | None:intergenic | 40.0% | |
| GTCATGTATGGGATTGTTCT+CGG | + | chr3_2:1798634-1798653 | None:intergenic | 40.0% | |
| AGGTTTCATCGGTCATGTAT+GGG | + | chr3_2:1798645-1798664 | None:intergenic | 40.0% | |
| TAGGTTTCATCGGTCATGTA+TGG | + | chr3_2:1798646-1798665 | None:intergenic | 40.0% | |
| GAGAACGATTCAAGCCATAA+GGG | + | chr3_2:1798706-1798725 | None:intergenic | 40.0% | |
| GATACAAGGGGTTCTCATTA+TGG | + | chr3_2:1798837-1798856 | None:intergenic | 40.0% | |
| !! | CATGGTCTTGTCATTCATGT+AGG | - | chr3_2:1798903-1798922 | Msa0390730:intron | 40.0% |
| TCATGCTTGCTTGTTTACCT+CGG | - | chr3_2:1798936-1798955 | Msa0390730:intron | 40.0% | |
| ACCTTTATCGAACCGATTAG+CGG | - | chr3_2:1798960-1798979 | Msa0390730:intron | 40.0% | |
| ACTTCGCGTCTTATCATTCT+AGG | - | chr3_2:1799061-1799080 | Msa0390730:intron | 40.0% | |
| CTTCGCGTCTTATCATTCTA+GGG | - | chr3_2:1799062-1799081 | Msa0390730:intron | 40.0% | |
| AGTTCTCAACAACTATGTCG+AGG | - | chr3_2:1799103-1799122 | Msa0390730:intron | 40.0% | |
| GCATGATACGATACGATTTG+GGG | + | chr3_2:1799164-1799183 | None:intergenic | 40.0% | |
| GGCATGATACGATACGATTT+GGG | + | chr3_2:1799165-1799184 | None:intergenic | 40.0% | |
| TGGCATGATACGATACGATT+TGG | + | chr3_2:1799166-1799185 | None:intergenic | 40.0% | |
| ATGCTTGGTACATGAGAGAA+TGG | + | chr3_2:1799186-1799205 | None:intergenic | 40.0% | |
| ! | TCATATAGGACCTTGGTTTG+AGG | - | chr3_2:1799261-1799280 | Msa0390730:intron | 40.0% |
| ! | CATATAGGACCTTGGTTTGA+GGG | - | chr3_2:1799262-1799281 | Msa0390730:intron | 40.0% |
| ! | ATATAGGACCTTGGTTTGAG+GGG | - | chr3_2:1799263-1799282 | Msa0390730:intron | 40.0% |
| CCATGGCGAGTAAATTTACT+GGG | - | chr3_2:1799383-1799402 | Msa0390730:intron | 40.0% | |
| CATGGCGAGTAAATTTACTG+GGG | - | chr3_2:1799384-1799403 | Msa0390730:intron | 40.0% | |
| !! | GACACTTGGTTTGAGGTTTT+TGG | + | chr3_2:1799527-1799546 | None:intergenic | 40.0% |
| ! | ACTTAGAGACACTTGGTTTG+AGG | + | chr3_2:1799534-1799553 | None:intergenic | 40.0% |
| ATAATCATGATCCCAAAGGG+TGG | - | chr3_2:1799702-1799721 | Msa0390730:intron | 40.0% | |
| TAATCATGATCCCAAAGGGT+GGG | - | chr3_2:1799703-1799722 | Msa0390730:intron | 40.0% | |
| ! | AGATAGTTTTCCCACCCTTT+GGG | + | chr3_2:1799716-1799735 | None:intergenic | 40.0% |
| ! | TAGATAGTTTTCCCACCCTT+TGG | + | chr3_2:1799717-1799736 | None:intergenic | 40.0% |
| AAGGGTGGGAAAACTATCTA+TGG | - | chr3_2:1799717-1799736 | Msa0390730:intron | 40.0% | |
| !!! | GGTTTTGATTGCTTGAGCTT+AGG | + | chr3_2:1799779-1799798 | None:intergenic | 40.0% |
| AAGAGTTAGGGTTTGGAAGA+TGG | + | chr3_2:1799923-1799942 | None:intergenic | 40.0% | |
| TGGAATCAAGAGTTAGGGTT+TGG | + | chr3_2:1799930-1799949 | None:intergenic | 40.0% | |
| ! | TGGTCTTGATCAAGAAGCTA+AGG | + | chr3_2:1800054-1800073 | None:intergenic | 40.0% |
| CTTCTCTAATTCTCCTTCCA+TGG | + | chr3_2:1800180-1800199 | None:intergenic | 40.0% | |
| CATGGAAGGAGAATTAGAGA+AGG | - | chr3_2:1800178-1800197 | Msa0390730:intron | 40.0% | |
| TTGCCAACATAGAGAGAGAA+AGG | - | chr3_2:1800262-1800281 | Msa0390730:intron | 40.0% | |
| ! | CATGAGGTGTCAGCTTAATA+CGG | + | chr3_2:1800398-1800417 | None:intergenic | 40.0% |
| AATATCCAGTCTGTCAGTAC+CGG | + | chr3_2:1800489-1800508 | None:intergenic | 40.0% | |
| CAGACTGGATATTACACTTG+TGG | - | chr3_2:1800496-1800515 | Msa0390730:CDS | 40.0% | |
| CAATGGCAAACTTCACAACA+AGG | + | chr3_2:1800586-1800605 | None:intergenic | 40.0% | |
| ! | CTTGTTGTGAAGTTTGCCAT+TGG | - | chr3_2:1800584-1800603 | Msa0390730:CDS | 40.0% |
| AGTAACCATTGAGACACCAA+TGG | + | chr3_2:1800603-1800622 | None:intergenic | 40.0% | |
| TATGCATTCACGAACATGTG+AGG | + | chr3_2:1800668-1800687 | None:intergenic | 40.0% | |
| CAAGGTTAAGGAGTTCTTGA+AGG | - | chr3_2:1800742-1800761 | Msa0390730:CDS | 40.0% | |
| GCAGCTACAACAAACTTACT+TGG | + | chr3_2:1800770-1800789 | None:intergenic | 40.0% | |
| TCCTCATCAGATTCTTCTTC+GGG | + | chr3_2:1800836-1800855 | None:intergenic | 40.0% | |
| GTCCTCATCAGATTCTTCTT+CGG | + | chr3_2:1800837-1800856 | None:intergenic | 40.0% | |
| GAAGAATCTGATGAGGACAT+TGG | - | chr3_2:1800839-1800858 | Msa0390730:CDS | 40.0% | |
| !!! | TCTGATGAGGACATTGGTTT+TGG | - | chr3_2:1800845-1800864 | Msa0390730:CDS | 40.0% |
| !!! | TTCTCGGCTTTGGTTGGTTT+TGG | + | chr3_2:1797232-1797251 | None:intergenic | 45.0% |
| ! | TGTTTCTTCTCGGCTTTGGT+TGG | + | chr3_2:1797238-1797257 | None:intergenic | 45.0% |
| ! | AGCTTGTTTCTTCTCGGCTT+TGG | + | chr3_2:1797242-1797261 | None:intergenic | 45.0% |
| !! | CACCACGAATATTCTGAAGC+TGG | + | chr3_2:1797342-1797361 | None:intergenic | 45.0% |
| CAGCTTCAGAATATTCGTGG+TGG | - | chr3_2:1797340-1797359 | Msa0390730:CDS | 45.0% | |
| TGGTGGTTTACGTGGTGATT+CGG | - | chr3_2:1797357-1797376 | Msa0390730:CDS | 45.0% | |
| AACCTTATCCCTCTCCTTGT+TGG | - | chr3_2:1797460-1797479 | Msa0390730:CDS | 45.0% | |
| TTCCAACAAGGAGAGGGATA+AGG | + | chr3_2:1797465-1797484 | None:intergenic | 45.0% | |
| CCACATTTCCAACAAGGAGA+GGG | + | chr3_2:1797471-1797490 | None:intergenic | 45.0% | |
| CCTCTCCTTGTTGGAAATGT+GGG | - | chr3_2:1797469-1797488 | Msa0390730:CDS | 45.0% | |
| TTTCACCAAAGGAGACCTCA+AGG | - | chr3_2:1797498-1797517 | Msa0390730:intron | 45.0% | |
| TGAAGAGGTTGCCAAGTACA+AGG | - | chr3_2:1797528-1797547 | Msa0390730:intron | 45.0% | |
| GGAGGGACAACAACATCAAT+TGG | + | chr3_2:1797586-1797605 | None:intergenic | 45.0% | |
| ATTGATGTTGTTGTCCCTCC+TGG | - | chr3_2:1797586-1797605 | Msa0390730:intron | 45.0% | |
| ! | TGGAAGAAAGAGGTATGGGA+GGG | + | chr3_2:1797628-1797647 | None:intergenic | 45.0% |
| ! | CACCTGGAAGAAAGAGGTAT+GGG | + | chr3_2:1797632-1797651 | None:intergenic | 45.0% |
| CCCTGTTGAACTCATCAAGA+AGG | - | chr3_2:1797699-1797718 | Msa0390730:intron | 45.0% | |
| CCCTTCTTGATGAGTTCAAC+AGG | + | chr3_2:1797703-1797722 | None:intergenic | 45.0% | |
| ACTCATCAAGAAGGGAGACA+AGG | - | chr3_2:1797708-1797727 | Msa0390730:intron | 45.0% | |
| ATCAAGAAGGGAGACAAGGT+TGG | - | chr3_2:1797712-1797731 | Msa0390730:intron | 45.0% | |
| AAATGGTCTGATGCCTAGCT+TGG | + | chr3_2:1797761-1797780 | None:intergenic | 45.0% | |
| TACTCGCAGCATGGTGATTA+CGG | + | chr3_2:1797975-1797994 | None:intergenic | 45.0% | |
| CTCTCGCTGAAATATCCATC+CGG | - | chr3_2:1798003-1798022 | Msa0390730:intron | 45.0% | |
| ! | GATAAACAGGTTGGACGTCA+AGG | + | chr3_2:1798035-1798054 | None:intergenic | 45.0% |
| AGTGAGTTCCCCTAAATCCT+AGG | - | chr3_2:1798092-1798111 | Msa0390730:intron | 45.0% | |
| TCCCCTAAATCCTAGGCTAT+AGG | - | chr3_2:1798099-1798118 | Msa0390730:intron | 45.0% | |
| CTAGGCTATAGGTAACCTCA+GGG | - | chr3_2:1798110-1798129 | Msa0390730:intron | 45.0% | |
| TAGGCTATAGGTAACCTCAG+GGG | - | chr3_2:1798111-1798130 | Msa0390730:intron | 45.0% | |
| GTGTCTACAATACAACCCGA+CGG | - | chr3_2:1798151-1798170 | Msa0390730:intron | 45.0% | |
| CACACGTATAATCAACCGTC+GGG | + | chr3_2:1798169-1798188 | None:intergenic | 45.0% | |
| GACGGTTGATTATACGTGTG+TGG | - | chr3_2:1798169-1798188 | Msa0390730:intron | 45.0% | |
| GTGCATACTAGATTCGTCGT+AGG | - | chr3_2:1798211-1798230 | Msa0390730:intron | 45.0% | |
| TTGACCGTCATGACACGTAT+AGG | + | chr3_2:1798266-1798285 | None:intergenic | 45.0% | |
| TATACGTGTCATGACGGTCA+AGG | - | chr3_2:1798265-1798284 | Msa0390730:intron | 45.0% | |
| ATACGTGTCATGACGGTCAA+GGG | - | chr3_2:1798266-1798285 | Msa0390730:intron | 45.0% | |
| AGAGCGTATTCTTGGCAATG+CGG | + | chr3_2:1798302-1798321 | None:intergenic | 45.0% | |
| CGATACGTAGAGCGTATTCT+TGG | + | chr3_2:1798310-1798329 | None:intergenic | 45.0% | |
| AGAATACGCTCTACGTATCG+AGG | - | chr3_2:1798310-1798329 | Msa0390730:intron | 45.0% | |
| ! | TTCATTTTACGGAAAGCCCC+AGG | - | chr3_2:1798598-1798617 | Msa0390730:intron | 45.0% |
| CATGTATGGGATTGTTCTCG+GGG | + | chr3_2:1798632-1798651 | None:intergenic | 45.0% | |
| ATGACCGATGAAACCTAGCA+AGG | - | chr3_2:1798649-1798668 | Msa0390730:intron | 45.0% | |
| TGACCGATGAAACCTAGCAA+GGG | - | chr3_2:1798650-1798669 | Msa0390730:intron | 45.0% | |
| GTACCCTTGCTAGGTTTCAT+CGG | + | chr3_2:1798656-1798675 | None:intergenic | 45.0% | |
| ! | GAAACCTAGCAAGGGTACAT+CGG | - | chr3_2:1798658-1798677 | Msa0390730:intron | 45.0% |
| GGAGAACGATTCAAGCCATA+AGG | + | chr3_2:1798707-1798726 | None:intergenic | 45.0% | |
| ATGGCTTGAATCGTTCTCCT+TGG | - | chr3_2:1798708-1798727 | Msa0390730:intron | 45.0% | |
| TGGCTTGAATCGTTCTCCTT+GGG | - | chr3_2:1798709-1798728 | Msa0390730:intron | 45.0% | |
| ! | TCTCTTGTTATCCACGTCAG+GGG | + | chr3_2:1798753-1798772 | None:intergenic | 45.0% |
| ! | GTCTCTTGTTATCCACGTCA+GGG | + | chr3_2:1798754-1798773 | None:intergenic | 45.0% |
| ! | TGTCTCTTGTTATCCACGTC+AGG | + | chr3_2:1798755-1798774 | None:intergenic | 45.0% |
| AGGGGTTCTCATTATGGGAA+CGG | + | chr3_2:1798831-1798850 | None:intergenic | 45.0% | |
| !! | ACCGCTAATCGGTTCGATAA+AGG | + | chr3_2:1798964-1798983 | None:intergenic | 45.0% |
| ACGTAAAACCCCTCAAACCA+AGG | + | chr3_2:1799274-1799293 | None:intergenic | 45.0% | |
| !! | AGGTTTTGGCATTCTTCGAG+CGG | + | chr3_2:1799321-1799340 | None:intergenic | 45.0% |
| !! | ACACATGGTTTGCTCGTTTC+CGG | + | chr3_2:1799345-1799364 | None:intergenic | 45.0% |
| GCCATGGCGAGTAAATTTAC+TGG | - | chr3_2:1799382-1799401 | Msa0390730:intron | 45.0% | |
| CCCAGTAAATTTACTCGCCA+TGG | + | chr3_2:1799386-1799405 | None:intergenic | 45.0% | |
| GCTTGAACTTGTGCATGAAG+TGG | + | chr3_2:1799887-1799906 | None:intergenic | 45.0% | |
| TATGGGCTTGGATGGAAGTT+GGG | + | chr3_2:1799960-1799979 | None:intergenic | 45.0% | |
| GAAACAACTATGGGCTTGGA+TGG | + | chr3_2:1799968-1799987 | None:intergenic | 45.0% | |
| GCAAGAAACAACTATGGGCT+TGG | + | chr3_2:1799972-1799991 | None:intergenic | 45.0% | |
| TTGAACATGCTTCATGGGGT+TGG | + | chr3_2:1800003-1800022 | None:intergenic | 45.0% | |
| GTGAGAGAAGAGAAGAGAGA+AGG | - | chr3_2:1800228-1800247 | Msa0390730:intron | 45.0% | |
| ATTTAGCACGCTTCAGGCAA+GGG | + | chr3_2:1800357-1800376 | None:intergenic | 45.0% | |
| !! | AAATTCCGGTACTGACAGAC+TGG | - | chr3_2:1800481-1800500 | Msa0390730:CDS | 45.0% |
| GTCCTCTCTGTGTATGACAA+TGG | - | chr3_2:1800518-1800537 | Msa0390730:CDS | 45.0% | |
| AGCCATTGTCATACACAGAG+AGG | + | chr3_2:1800523-1800542 | None:intergenic | 45.0% | |
| CAGTAAGATCCAGAACCTCA+GGG | + | chr3_2:1800556-1800575 | None:intergenic | 45.0% | |
| TCAGTAAGATCCAGAACCTC+AGG | + | chr3_2:1800557-1800576 | None:intergenic | 45.0% | |
| !! | TGAGGTTCTGGATCTTACTG+AGG | - | chr3_2:1800556-1800575 | Msa0390730:CDS | 45.0% |
| ! | GTTTGCCATTGGTGTCTCAA+TGG | - | chr3_2:1800595-1800614 | Msa0390730:CDS | 45.0% |
| TGTTGGATAAGAGATGGCCA+AGG | + | chr3_2:1800633-1800652 | None:intergenic | 45.0% | |
| !! | AGCGAGTGTTGGATAAGAGA+TGG | + | chr3_2:1800639-1800658 | None:intergenic | 45.0% |
| AACCGAGTATTCTTTCCCTG+AGG | - | chr3_2:1800715-1800734 | Msa0390730:CDS | 45.0% | |
| AGCCTCAGGGAAAGAATACT+CGG | + | chr3_2:1800720-1800739 | None:intergenic | 45.0% | |
| AGCAGCAGAAACATCAGTCA+GGG | + | chr3_2:1800801-1800820 | None:intergenic | 45.0% | |
| GAGGATGCACGCTGAGAAAA+CGG | - | chr3_2:1797420-1797439 | Msa0390730:CDS | 50.0% | |
| AGGATGCACGCTGAGAAAAC+GGG | - | chr3_2:1797421-1797440 | Msa0390730:CDS | 50.0% | |
| CCCTCTCCTTGTTGGAAATG+TGG | - | chr3_2:1797468-1797487 | Msa0390730:CDS | 50.0% | |
| CCCACATTTCCAACAAGGAG+AGG | + | chr3_2:1797472-1797491 | None:intergenic | 50.0% | |
| GAGGTTGCCAAGTACAAGGT+TGG | - | chr3_2:1797532-1797551 | Msa0390730:intron | 50.0% | |
| AGGAGCTCCAACCTTGTACT+TGG | + | chr3_2:1797542-1797561 | None:intergenic | 50.0% | |
| ! | GGAAGAAAGAGGTATGGGAG+GGG | + | chr3_2:1797627-1797646 | None:intergenic | 50.0% |
| ! | CTGGAAGAAAGAGGTATGGG+AGG | + | chr3_2:1797629-1797648 | None:intergenic | 50.0% |
| CTCCCATACCTCTTTCTTCC+AGG | - | chr3_2:1797627-1797646 | Msa0390730:intron | 50.0% | |
| GCACCTGGAAGAAAGAGGTA+TGG | + | chr3_2:1797633-1797652 | None:intergenic | 50.0% | |
| GTTGAGCACCTGGAAGAAAG+AGG | + | chr3_2:1797638-1797657 | None:intergenic | 50.0% | |
| TTGTGGGAATGTTGAGCACC+TGG | + | chr3_2:1797648-1797667 | None:intergenic | 50.0% | |
| CCTGAGGTTACCTATAGCCT+AGG | + | chr3_2:1798112-1798131 | None:intergenic | 50.0% | |
| CCTAGGCTATAGGTAACCTC+AGG | - | chr3_2:1798109-1798128 | Msa0390730:intron | 50.0% | |
| GTAACCTCAGGGGAAACCTA+CGG | - | chr3_2:1798121-1798140 | Msa0390730:intron | 50.0% | |
| CGGGTTGTATTGTAGACACG+TGG | + | chr3_2:1798150-1798169 | None:intergenic | 50.0% | |
| GTGTGGTCATGCTTCCTAGA+CGG | - | chr3_2:1798186-1798205 | Msa0390730:intron | 50.0% | |
| TCTAGTATGCACGACCGTCT+AGG | + | chr3_2:1798203-1798222 | None:intergenic | 50.0% | |
| TACGTGTCATGACGGTCAAG+GGG | - | chr3_2:1798267-1798286 | Msa0390730:intron | 50.0% | |
| ! | ATTTTACGGAAAGCCCCAGG+TGG | - | chr3_2:1798601-1798620 | Msa0390730:intron | 50.0% |
| ! | CTCTTGTTATCCACGTCAGG+GGG | + | chr3_2:1798752-1798771 | None:intergenic | 50.0% |
| ! | TCTCTTGCTATCCACACCAG+GGG | + | chr3_2:1798860-1798879 | None:intergenic | 50.0% |
| ! | GTCTCTTGCTATCCACACCA+GGG | + | chr3_2:1798861-1798880 | None:intergenic | 50.0% |
| ! | TGTCTCTTGCTATCCACACC+AGG | + | chr3_2:1798862-1798881 | None:intergenic | 50.0% |
| ! | TCGGTTCGATAAAGGTTCCG+AGG | + | chr3_2:1798956-1798975 | None:intergenic | 50.0% |
| CGAAGAATGCCAAAACCTGC+CGG | - | chr3_2:1799323-1799342 | Msa0390730:intron | 50.0% | |
| GGCGAGTAAATTTACTGGGG+AGG | - | chr3_2:1799387-1799406 | Msa0390730:intron | 50.0% | |
| AGCAGAACGAAGCACAACCA+AGG | + | chr3_2:1799453-1799472 | None:intergenic | 50.0% | |
| TGCTTGAGCTTAGGGCTTGA+AGG | + | chr3_2:1799770-1799789 | None:intergenic | 50.0% | |
| CTATGGGCTTGGATGGAAGT+TGG | + | chr3_2:1799961-1799980 | None:intergenic | 50.0% | |
| GATTTAGCACGCTTCAGGCA+AGG | + | chr3_2:1800358-1800377 | None:intergenic | 50.0% | |
| TGTCGGATTTAGCACGCTTC+AGG | + | chr3_2:1800363-1800382 | None:intergenic | 50.0% | |
| TGTGTTTAGCCCTGAGGTTC+TGG | - | chr3_2:1800544-1800563 | Msa0390730:CDS | 50.0% | |
| TTCTTTCCCTGAGGCTGACA+AGG | - | chr3_2:1800724-1800743 | Msa0390730:CDS | 50.0% | |
| CCTTAACCTTGTCAGCCTCA+GGG | + | chr3_2:1800733-1800752 | None:intergenic | 50.0% | |
| TCCTTAACCTTGTCAGCCTC+AGG | + | chr3_2:1800734-1800753 | None:intergenic | 50.0% | |
| CAGCAGCAGAAACATCAGTC+AGG | + | chr3_2:1800802-1800821 | None:intergenic | 50.0% | |
| ! | TGTTTCTGCTGCTGCCAATG+AGG | - | chr3_2:1800808-1800827 | Msa0390730:CDS | 50.0% |
| TTCTTCTTCGGGCTCCTCAT+TGG | + | chr3_2:1800825-1800844 | None:intergenic | 50.0% | |
| GCCCGAAGAAGAATCTGATG+AGG | - | chr3_2:1800832-1800851 | Msa0390730:CDS | 50.0% | |
| GGATGCACGCTGAGAAAACG+GGG | - | chr3_2:1797422-1797441 | Msa0390730:CDS | 55.0% | |
| CACCAAAGGAGACCTCAAGG+AGG | - | chr3_2:1797501-1797520 | Msa0390730:intron | 55.0% | |
| GACCTCCTTGAGGTCTCCTT+TGG | + | chr3_2:1797506-1797525 | None:intergenic | 55.0% | |
| CCTCTTCACTGACCTCCTTG+AGG | + | chr3_2:1797516-1797535 | None:intergenic | 55.0% | |
| CCTCAAGGAGGTCAGTGAAG+AGG | - | chr3_2:1797513-1797532 | Msa0390730:intron | 55.0% | |
| !! | AGCTCCTGCTCGTGTTGGTT+TGG | - | chr3_2:1797555-1797574 | Msa0390730:intron | 55.0% |
| GCAACCAAACCAACACGAGC+AGG | + | chr3_2:1797562-1797581 | None:intergenic | 55.0% | |
| TTGTCCCTCCTGGCAACAGA+GGG | - | chr3_2:1797596-1797615 | Msa0390730:intron | 55.0% | |
| ! | AAAGAGGTATGGGAGGGGTC+AGG | + | chr3_2:1797622-1797641 | None:intergenic | 55.0% |
| GTTGCGTTGCTTGCCAAGCT+AGG | - | chr3_2:1797745-1797764 | Msa0390730:intron | 55.0% | |
| GCTTGTTCGTACTCGCAGCA+TGG | + | chr3_2:1797984-1798003 | None:intergenic | 55.0% | |
| TTGGACGTCAAGGTAGCAGC+CGG | + | chr3_2:1798025-1798044 | None:intergenic | 55.0% | |
| TGTAGACACGTGGTGACCGT+AGG | + | chr3_2:1798140-1798159 | None:intergenic | 55.0% | |
| TTCTCGGGGTTACTCCACCT+GGG | + | chr3_2:1798618-1798637 | None:intergenic | 55.0% | |
| GAGTCCGATGTACCCTTGCT+AGG | + | chr3_2:1798665-1798684 | None:intergenic | 55.0% | |
| ! | AAGGGTACATCGGACTCCCT+CGG | - | chr3_2:1798668-1798687 | Msa0390730:intron | 55.0% |
| TACGAGAGGTTCTCGACCCA+AGG | + | chr3_2:1798728-1798747 | None:intergenic | 55.0% | |
| AGTGACATGTGGGTCCCTTG+CGG | - | chr3_2:1798799-1798818 | Msa0390730:intron | 55.0% | |
| TCCACACCAGGGGGATACAA+GGG | + | chr3_2:1798850-1798869 | None:intergenic | 55.0% | |
| ATCCACACCAGGGGGATACA+AGG | + | chr3_2:1798851-1798870 | None:intergenic | 55.0% | |
| ! | CTCTTGCTATCCACACCAGG+GGG | + | chr3_2:1798859-1798878 | None:intergenic | 55.0% |
| ! | TGCTCGTTTCCGGCAGGTTT+TGG | + | chr3_2:1799335-1799354 | None:intergenic | 55.0% |
| !! | ATGGTTTGCTCGTTTCCGGC+AGG | + | chr3_2:1799341-1799360 | None:intergenic | 55.0% |
| GCAGACTGTGTGGTCACACA+TGG | + | chr3_2:1799360-1799379 | None:intergenic | 55.0% | |
| GTTGGAGGTGAGCAGAACCT+TGG | - | chr3_2:1799433-1799452 | Msa0390730:intron | 55.0% | |
| ! | TGGCTCTGTGTTTAGCCCTG+AGG | - | chr3_2:1800538-1800557 | Msa0390730:CDS | 55.0% |
| CCCTGAGGCTGACAAGGTTA+AGG | - | chr3_2:1800730-1800749 | Msa0390730:CDS | 55.0% | |
| GTTGGAGCTCCTGCTCGTGT+TGG | - | chr3_2:1797550-1797569 | Msa0390730:intron | 60.0% | |
| GTTGTCCCTCCTGGCAACAG+AGG | - | chr3_2:1797595-1797614 | Msa0390730:intron | 60.0% | |
| ACGTCAAGGTAGCAGCCGGA+TGG | + | chr3_2:1798021-1798040 | None:intergenic | 60.0% | |
| GTGACCGTAGGTTTCCCCTG+AGG | + | chr3_2:1798128-1798147 | None:intergenic | 60.0% | |
| TCTCGGGGTTACTCCACCTG+GGG | + | chr3_2:1798617-1798636 | None:intergenic | 60.0% | |
| GTTCTCGGGGTTACTCCACC+TGG | + | chr3_2:1798619-1798638 | None:intergenic | 60.0% | |
| GGGAACGGTTCAAGCCGCAA+GGG | + | chr3_2:1798816-1798835 | None:intergenic | 60.0% | |
| TGGGAACGGTTCAAGCCGCA+AGG | + | chr3_2:1798817-1798836 | None:intergenic | 60.0% | |
| GAGAACCCCTTGTATCCCCC+TGG | - | chr3_2:1798841-1798860 | Msa0390730:intron | 60.0% | |
| CCACACCAGGGGGATACAAG+GGG | + | chr3_2:1798849-1798868 | None:intergenic | 60.0% | |
| ACCACACAGTCTGCTCGCCA+TGG | - | chr3_2:1799366-1799385 | Msa0390730:intron | 60.0% | |
| AACTGCTCGCCATGGCGAGT+TGG | - | chr3_2:1799415-1799434 | Msa0390730:intron | 60.0% | |
| TGCTCACCTCCAACTCGCCA+TGG | + | chr3_2:1799427-1799446 | None:intergenic | 60.0% | |
| GTGCTTCGTTCTGCTCGCTG+TGG | - | chr3_2:1799458-1799477 | Msa0390730:intron | 60.0% | |
| TGAGGTGCAGCAGCGAGTGT+TGG | + | chr3_2:1800650-1800669 | None:intergenic | 60.0% | |
| CAGGCCCTCTGTTGCCAGGA+GGG | + | chr3_2:1797603-1797622 | None:intergenic | 65.0% | |
| TCAGGCCCTCTGTTGCCAGG+AGG | + | chr3_2:1797604-1797623 | None:intergenic | 65.0% | |
| ! | GGTGTCGTGCGGGTCCCTTA+TGG | - | chr3_2:1798689-1798708 | Msa0390730:intron | 65.0% |
| CCACGTCAGGGGGATACGAG+AGG | + | chr3_2:1798742-1798761 | None:intergenic | 65.0% | |
| CCTCTCGTATCCCCCTGACG+TGG | - | chr3_2:1798739-1798758 | Msa0390730:intron | 65.0% | |
| CCCCTTGTATCCCCCTGGTG+TGG | - | chr3_2:1798846-1798865 | Msa0390730:intron | 65.0% | |
| GCCATGGCGAGCAGACTGTG+TGG | + | chr3_2:1799370-1799389 | None:intergenic | 65.0% | |
| AGGCGAGCAACTGCTCGCCA+TGG | - | chr3_2:1799407-1799426 | Msa0390730:intron | 65.0% | |
| ! | TGCTCGCCATGGCGAGTTGG+AGG | - | chr3_2:1799418-1799437 | Msa0390730:intron | 65.0% |
| GGGTCAGGCCCTCTGTTGCC+AGG | + | chr3_2:1797607-1797626 | None:intergenic | 70.0% | |
| !! | CGGACTCCCTCGGTGTCGTG+CGG | - | chr3_2:1798678-1798697 | Msa0390730:intron | 70.0% |
| !! | GGACTCCCTCGGTGTCGTGC+GGG | - | chr3_2:1798679-1798698 | Msa0390730:intron | 70.0% |
| AGGGACCCGCACGACACCGA+GGG | + | chr3_2:1798687-1798706 | None:intergenic | 70.0% | |
| AAGGGACCCGCACGACACCG+AGG | + | chr3_2:1798688-1798707 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 1797223 | 1800886 | 1797223 | ID=Msa0390730;Name=Msa0390730 |
| chr3_2 | mRNA | 1797223 | 1800886 | 1797223 | ID=Msa0390730-mRNA-1;Parent=Msa0390730;Name=Msa0390730-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|0|0|1|1|1|2|0|265 |
| chr3_2 | exon | 1800380 | 1800886 | 1800380 | ID=Msa0390730-mRNA-1:exon:605;Parent=Msa0390730-mRNA-1 |
| chr3_2 | exon | 1797223 | 1797513 | 1797223 | ID=Msa0390730-mRNA-1:exon:604;Parent=Msa0390730-mRNA-1 |
| chr3_2 | CDS | 1800380 | 1800886 | 1800380 | ID=Msa0390730-mRNA-1:cds;Parent=Msa0390730-mRNA-1 |
| chr3_2 | CDS | 1797223 | 1797513 | 1797223 | ID=Msa0390730-mRNA-1:cds;Parent=Msa0390730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
