Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1406430 | XP_003616595.1 | 78.638 | 323 | 11 | 2 | 1 | 265 | 1 | 323 | 2.14e-168 | 478 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1406430 | sp|P50346|RLA0_SOYBN | 69.592 | 319 | 40 | 2 | 1 | 262 | 1 | 319 | 9.83e-143 | 406 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1406430 | G7KGX1 | 78.638 | 323 | 11 | 2 | 1 | 265 | 1 | 323 | 1.02e-168 | 478 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003720 | Msa1406430 | 0.832718 | 8.055306e-56 | -8.615850e-47 |
| Msa0003890 | Msa1406430 | 0.815006 | 1.153387e-51 | -8.615850e-47 |
| Msa0006110 | Msa1406430 | 0.856045 | 4.195666e-62 | -8.615850e-47 |
| Msa0006380 | Msa1406430 | 0.815416 | 9.348149e-52 | -8.615850e-47 |
| Msa0017510 | Msa1406430 | 0.811664 | 6.252363e-51 | -8.615850e-47 |
| Msa0026430 | Msa1406430 | 0.829482 | 5.021255e-55 | -8.615850e-47 |
| Msa0026910 | Msa1406430 | 0.807586 | 4.702562e-50 | -8.615850e-47 |
| Msa0027260 | Msa1406430 | 0.827115 | 1.869572e-54 | -8.615850e-47 |
| Msa0028420 | Msa1406430 | 0.820885 | 5.413180e-53 | -8.615850e-47 |
| Msa0032090 | Msa1406430 | 0.800526 | 1.382601e-48 | -8.615850e-47 |
| Msa0032430 | Msa1406430 | 0.800301 | 1.536988e-48 | -8.615850e-47 |
| Msa0040690 | Msa1406430 | 0.817587 | 3.051520e-52 | -8.615850e-47 |
| Msa0045490 | Msa1406430 | 0.814954 | 1.184248e-51 | -8.615850e-47 |
| Msa0051630 | Msa1406430 | 0.800851 | 1.187022e-48 | -8.615850e-47 |
| Msa0051750 | Msa1406430 | 0.803964 | 2.711084e-49 | -8.615850e-47 |
| Msa0052680 | Msa1406430 | 0.827333 | 1.658103e-54 | -8.615850e-47 |
| Msa0052730 | Msa1406430 | 0.821530 | 3.845291e-53 | -8.615850e-47 |
| Msa0054440 | Msa1406430 | 0.813716 | 2.222922e-51 | -8.615850e-47 |
| Msa0054480 | Msa1406430 | 0.837114 | 6.292908e-57 | -8.615850e-47 |
| Msa0059040 | Msa1406430 | 0.805839 | 1.099463e-49 | -8.615850e-47 |
| Msa0059110 | Msa1406430 | 0.835747 | 1.401518e-56 | -8.615850e-47 |
| Msa0061340 | Msa1406430 | 0.800969 | 1.123063e-48 | -8.615850e-47 |
| Msa0070700 | Msa1406430 | 0.803067 | 4.160139e-49 | -8.615850e-47 |
| Msa0079380 | Msa1406430 | 0.809691 | 1.669787e-50 | -8.615850e-47 |
| Msa0079920 | Msa1406430 | 0.808096 | 3.662908e-50 | -8.615850e-47 |
| Msa0084380 | Msa1406430 | 0.813398 | 2.611431e-51 | -8.615850e-47 |
| Msa0090360 | Msa1406430 | 0.840906 | 6.556970e-58 | -8.615850e-47 |
| Msa0112770 | Msa1406430 | 0.804129 | 2.504664e-49 | -8.615850e-47 |
| Msa1353060 | Msa1406430 | 0.822980 | 1.771691e-53 | -8.615850e-47 |
| Msa1353470 | Msa1406430 | 0.828908 | 6.921200e-55 | -8.615850e-47 |
| Msa1358250 | Msa1406430 | 0.843112 | 1.711679e-58 | -8.615850e-47 |
| Msa1359040 | Msa1406430 | 0.803442 | 3.479322e-49 | -8.615850e-47 |
| Msa1361400 | Msa1406430 | 0.810585 | 1.071272e-50 | -8.615850e-47 |
| Msa1361410 | Msa1406430 | 0.816091 | 6.612580e-52 | -8.615850e-47 |
| Msa1367590 | Msa1406430 | 0.809088 | 2.248682e-50 | -8.615850e-47 |
| Msa1371640 | Msa1406430 | 0.822334 | 2.504379e-53 | -8.615850e-47 |
| Msa1374060 | Msa1406430 | 0.826435 | 2.717050e-54 | -8.615850e-47 |
| Msa1375840 | Msa1406430 | 0.811836 | 5.736179e-51 | -8.615850e-47 |
| Msa1376200 | Msa1406430 | 0.804066 | 2.582309e-49 | -8.615850e-47 |
| Msa1381350 | Msa1406430 | 0.821581 | 3.741144e-53 | -8.615850e-47 |
| Msa1382560 | Msa1406430 | 0.847337 | 1.232346e-59 | -8.615850e-47 |
| Msa1382620 | Msa1406430 | 0.806388 | 8.428124e-50 | -8.615850e-47 |
| Msa1386780 | Msa1406430 | 0.800439 | 1.440317e-48 | -8.615850e-47 |
| Msa1392780 | Msa1406430 | 0.849986 | 2.273637e-60 | -8.615850e-47 |
| Msa1394290 | Msa1406430 | 0.817205 | 3.720533e-52 | -8.615850e-47 |
| Msa1398090 | Msa1406430 | 0.807122 | 5.898339e-50 | -8.615850e-47 |
| Msa1400580 | Msa1406430 | 0.816727 | 4.764898e-52 | -8.615850e-47 |
| Msa1406430 | Msa1419870 | 0.812013 | 5.249629e-51 | -8.615850e-47 |
| Msa1406430 | Msa1423350 | 0.813953 | 1.971727e-51 | -8.615850e-47 |
| Msa1406430 | Msa1423870 | 0.806789 | 6.935456e-50 | -8.615850e-47 |
| Msa1406430 | Msa1433390 | 0.829707 | 4.427694e-55 | -8.615850e-47 |
| Msa1406430 | Msa1443300 | 0.820979 | 5.152322e-53 | -8.615850e-47 |
| Msa1406430 | Msa1448640 | 0.820617 | 6.241189e-53 | -8.615850e-47 |
| Msa1406430 | Msa1451160 | 0.836194 | 1.079521e-56 | -8.615850e-47 |
| Msa1406430 | Msa1457920 | 0.830703 | 2.529286e-55 | -8.615850e-47 |
| Msa1406430 | Msa1466540 | 0.839315 | 1.705832e-57 | -8.615850e-47 |
| Msa0610840 | Msa1406430 | -0.822964 | 1.787329e-53 | -8.615850e-47 |
| Msa0625720 | Msa1406430 | 0.816023 | 6.846414e-52 | -8.615850e-47 |
| Msa0663390 | Msa1406430 | 0.822209 | 2.676933e-53 | -8.615850e-47 |
| Msa0689260 | Msa1406430 | 0.845493 | 3.925209e-59 | -8.615850e-47 |
| Msa0691290 | Msa1406430 | 0.803136 | 4.025796e-49 | -8.615850e-47 |
| Msa0692040 | Msa1406430 | -0.818105 | 2.332283e-52 | -8.615850e-47 |
| Msa0709160 | Msa1406430 | 0.818710 | 1.700241e-52 | -8.615850e-47 |
| Msa0711780 | Msa1406430 | 0.842565 | 2.392300e-58 | -8.615850e-47 |
| Msa0715700 | Msa1406430 | 0.822768 | 1.985227e-53 | -8.615850e-47 |
| Msa0721280 | Msa1406430 | 0.800777 | 1.229122e-48 | -8.615850e-47 |
| Msa0731940 | Msa1406430 | 0.800947 | 1.134579e-48 | -8.615850e-47 |
| Msa0738440 | Msa1406430 | 0.809319 | 2.006910e-50 | -8.615850e-47 |
| Msa0745790 | Msa1406430 | 0.816093 | 6.605951e-52 | -8.615850e-47 |
| Msa0749290 | Msa1406430 | 0.807939 | 3.955983e-50 | -8.615850e-47 |
| Msa0750880 | Msa1406430 | 0.830647 | 2.610983e-55 | -8.615850e-47 |
| Msa0764300 | Msa1406430 | 0.815642 | 8.324910e-52 | -8.615850e-47 |
| Msa0765240 | Msa1406430 | 0.826055 | 3.346826e-54 | -8.615850e-47 |
| Msa0786270 | Msa1406430 | 0.812260 | 4.635530e-51 | -8.615850e-47 |
| Msa0790400 | Msa1406430 | 0.804249 | 2.364796e-49 | -8.615850e-47 |
| Msa0793800 | Msa1406430 | 0.815282 | 1.001291e-51 | -8.615850e-47 |
| Msa0794670 | Msa1406430 | 0.836402 | 9.559380e-57 | -8.615850e-47 |
| Msa0802830 | Msa1406430 | 0.816427 | 5.560660e-52 | -8.615850e-47 |
| Msa0808270 | Msa1406430 | 0.801051 | 1.080271e-48 | -8.615850e-47 |
| Msa0816710 | Msa1406430 | 0.821506 | 3.895062e-53 | -8.615850e-47 |
| Msa0820850 | Msa1406430 | 0.817261 | 3.613840e-52 | -8.615850e-47 |
| Msa0830540 | Msa1406430 | 0.801473 | 8.857579e-49 | -8.615850e-47 |
| Msa0831530 | Msa1406430 | 0.825918 | 3.606043e-54 | -8.615850e-47 |
| Msa0832340 | Msa1406430 | 0.818490 | 1.907514e-52 | -8.615850e-47 |
| Msa0835960 | Msa1406430 | 0.802601 | 5.193316e-49 | -8.615850e-47 |
| Msa0124060 | Msa1406430 | 0.803773 | 2.969841e-49 | -8.615850e-47 |
| Msa0137840 | Msa1406430 | 0.817519 | 3.161148e-52 | -8.615850e-47 |
| Msa0140820 | Msa1406430 | 0.804814 | 1.803399e-49 | -8.615850e-47 |
| Msa0146280 | Msa1406430 | 0.826190 | 3.107155e-54 | -8.615850e-47 |
| Msa0152400 | Msa1406430 | 0.804184 | 2.439477e-49 | -8.615850e-47 |
| Msa0157290 | Msa1406430 | 0.812106 | 5.008596e-51 | -8.615850e-47 |
| Msa0168500 | Msa1406430 | 0.802750 | 4.837234e-49 | -8.615850e-47 |
| Msa0169280 | Msa1406430 | 0.804457 | 2.140665e-49 | -8.615850e-47 |
| Msa0173070 | Msa1406430 | 0.804660 | 1.941782e-49 | -8.615850e-47 |
| Msa0184040 | Msa1406430 | 0.838098 | 3.518656e-57 | -8.615850e-47 |
| Msa0187120 | Msa1406430 | 0.817972 | 2.498457e-52 | -8.615850e-47 |
| Msa0188350 | Msa1406430 | 0.810769 | 9.777201e-51 | -8.615850e-47 |
| Msa0189300 | Msa1406430 | 0.802439 | 5.607937e-49 | -8.615850e-47 |
| Msa0197930 | Msa1406430 | 0.809100 | 2.235675e-50 | -8.615850e-47 |
| Msa0204960 | Msa1406430 | 0.801072 | 1.069782e-48 | -8.615850e-47 |
| Msa0205230 | Msa1406430 | 0.827106 | 1.878677e-54 | -8.615850e-47 |
| Msa0216240 | Msa1406430 | 0.803150 | 3.999397e-49 | -8.615850e-47 |
| Msa0220740 | Msa1406430 | 0.827390 | 1.606460e-54 | -8.615850e-47 |
| Msa0231980 | Msa1406430 | 0.820054 | 8.401147e-53 | -8.615850e-47 |
| Msa0232050 | Msa1406430 | 0.803000 | 4.294892e-49 | -8.615850e-47 |
| Msa1228620 | Msa1406430 | -0.808546 | 2.936806e-50 | -8.615850e-47 |
| Msa1245930 | Msa1406430 | 0.829679 | 4.498563e-55 | -8.615850e-47 |
| Msa1251160 | Msa1406430 | 0.801985 | 6.953605e-49 | -8.615850e-47 |
| Msa1253020 | Msa1406430 | 0.811061 | 8.452067e-51 | -8.615850e-47 |
| Msa1254730 | Msa1406430 | 0.806805 | 6.881494e-50 | -8.615850e-47 |
| Msa1259060 | Msa1406430 | 0.823549 | 1.304492e-53 | -8.615850e-47 |
| Msa1276660 | Msa1406430 | 0.817429 | 3.312311e-52 | -8.615850e-47 |
| Msa1284550 | Msa1406430 | 0.812850 | 3.445133e-51 | -8.615850e-47 |
| Msa1303240 | Msa1406430 | 0.802735 | 4.872328e-49 | -8.615850e-47 |
| Msa1303250 | Msa1406430 | 0.821950 | 3.074606e-53 | -8.615850e-47 |
| Msa1313140 | Msa1406430 | 0.814679 | 1.362333e-51 | -8.615850e-47 |
| Msa1328640 | Msa1406430 | 0.812545 | 4.017162e-51 | -8.615850e-47 |
| Msa1328710 | Msa1406430 | 0.840126 | 1.048827e-57 | -8.615850e-47 |
| Msa1342900 | Msa1406430 | 0.805844 | 1.096786e-49 | -8.615850e-47 |
| Msa0376310 | Msa1406430 | 0.803594 | 3.235214e-49 | -8.615850e-47 |
| Msa0385580 | Msa1406430 | 0.834192 | 3.455625e-56 | -8.615850e-47 |
| Msa0388700 | Msa1406430 | 0.812436 | 4.243818e-51 | -8.615850e-47 |
| Msa0388950 | Msa1406430 | 0.814721 | 1.333801e-51 | -8.615850e-47 |
| Msa0390730 | Msa1406430 | 0.997670 | 7.343314e-247 | -8.615850e-47 |
| Msa0392510 | Msa1406430 | 0.809414 | 1.914531e-50 | -8.615850e-47 |
| Msa0395820 | Msa1406430 | 0.835474 | 1.642832e-56 | -8.615850e-47 |
| Msa0402790 | Msa1406430 | 0.814545 | 1.458796e-51 | -8.615850e-47 |
| Msa0410650 | Msa1406430 | 0.806567 | 7.726934e-50 | -8.615850e-47 |
| Msa0410870 | Msa1406430 | 0.811561 | 6.581874e-51 | -8.615850e-47 |
| Msa0411430 | Msa1406430 | 0.806861 | 6.695935e-50 | -8.615850e-47 |
| Msa0419410 | Msa1406430 | 0.806591 | 7.635721e-50 | -8.615850e-47 |
| Msa0422840 | Msa1406430 | 0.805428 | 1.341200e-49 | -8.615850e-47 |
| Msa0422920 | Msa1406430 | 0.807769 | 4.299408e-50 | -8.615850e-47 |
| Msa0481530 | Msa1406430 | 0.813383 | 2.631481e-51 | -8.615850e-47 |
| Msa0983320 | Msa1406430 | -0.803102 | 4.091326e-49 | -8.615850e-47 |
| Msa0983500 | Msa1406430 | -0.807032 | 6.160684e-50 | -8.615850e-47 |
| Msa1005990 | Msa1406430 | 0.828528 | 8.553515e-55 | -8.615850e-47 |
| Msa1006840 | Msa1406430 | 0.815058 | 1.123014e-51 | -8.615850e-47 |
| Msa1013400 | Msa1406430 | 0.826084 | 3.293283e-54 | -8.615850e-47 |
| Msa1048160 | Msa1406430 | 0.818057 | 2.391129e-52 | -8.615850e-47 |
| Msa1075650 | Msa1406430 | 0.816240 | 6.124374e-52 | -8.615850e-47 |
| Msa1078170 | Msa1406430 | 0.815208 | 1.039801e-51 | -8.615850e-47 |
| Msa1081930 | Msa1406430 | 0.837465 | 5.115760e-57 | -8.615850e-47 |
| Msa1085200 | Msa1406430 | 0.807760 | 4.319328e-50 | -8.615850e-47 |
| Msa1088640 | Msa1406430 | 0.803719 | 3.047520e-49 | -8.615850e-47 |
| Msa1093530 | Msa1406430 | 0.828684 | 7.838481e-55 | -8.615850e-47 |
| Msa1093840 | Msa1406430 | 0.808304 | 3.307254e-50 | -8.615850e-47 |
| Msa1100050 | Msa1406430 | 0.807140 | 5.846100e-50 | -8.615850e-47 |
| Msa1101090 | Msa1406430 | 0.803919 | 2.769722e-49 | -8.615850e-47 |
| Msa1104140 | Msa1406430 | 0.806676 | 7.328386e-50 | -8.615850e-47 |
| Msa0249580 | Msa1406430 | 0.811958 | 5.396311e-51 | -8.615850e-47 |
| Msa0253200 | Msa1406430 | 0.804062 | 2.586520e-49 | -8.615850e-47 |
| Msa0255090 | Msa1406430 | 0.805006 | 1.644112e-49 | -8.615850e-47 |
| Msa0257460 | Msa1406430 | 0.817390 | 3.381049e-52 | -8.615850e-47 |
| Msa0258310 | Msa1406430 | 0.801713 | 7.907364e-49 | -8.615850e-47 |
| Msa0259380 | Msa1406430 | 0.800762 | 1.237749e-48 | -8.615850e-47 |
| Msa0262340 | Msa1406430 | 0.815816 | 7.615429e-52 | -8.615850e-47 |
| Msa0270320 | Msa1406430 | 0.829363 | 5.368546e-55 | -8.615850e-47 |
| Msa0271530 | Msa1406430 | 0.839827 | 1.255215e-57 | -8.615850e-47 |
| Msa0288080 | Msa1406430 | 0.800233 | 1.586296e-48 | -8.615850e-47 |
| Msa0292030 | Msa1406430 | 0.806612 | 7.560842e-50 | -8.615850e-47 |
| Msa0296740 | Msa1406430 | 0.814182 | 1.754654e-51 | -8.615850e-47 |
| Msa0297790 | Msa1406430 | 0.800926 | 1.145782e-48 | -8.615850e-47 |
| Msa0307850 | Msa1406430 | 0.830727 | 2.495827e-55 | -8.615850e-47 |
| Msa0309750 | Msa1406430 | 0.824182 | 9.270014e-54 | -8.615850e-47 |
| Msa0317730 | Msa1406430 | 0.803657 | 3.139337e-49 | -8.615850e-47 |
| Msa0326480 | Msa1406430 | 0.828192 | 1.030679e-54 | -8.615850e-47 |
| Msa0334360 | Msa1406430 | 0.824012 | 1.016363e-53 | -8.615850e-47 |
| Msa0335800 | Msa1406430 | 0.801294 | 9.635013e-49 | -8.615850e-47 |
| Msa0337620 | Msa1406430 | 0.817517 | 3.165282e-52 | -8.615850e-47 |
| Msa0339500 | Msa1406430 | 0.805196 | 1.500270e-49 | -8.615850e-47 |
| Msa0341540 | Msa1406430 | 0.801014 | 1.099458e-48 | -8.615850e-47 |
| Msa0357900 | Msa1406430 | 0.801681 | 8.029791e-49 | -8.615850e-47 |
| Msa0359030 | Msa1406430 | 0.800675 | 1.289653e-48 | -8.615850e-47 |
| Msa1109680 | Msa1406430 | 0.817248 | 3.638594e-52 | -8.615850e-47 |
| Msa1123380 | Msa1406430 | 0.831024 | 2.110405e-55 | -8.615850e-47 |
| Msa1128600 | Msa1406430 | 0.842483 | 2.515968e-58 | -8.615850e-47 |
| Msa1135470 | Msa1406430 | 0.848922 | 4.500044e-60 | -8.615850e-47 |
| Msa1137570 | Msa1406430 | 0.815790 | 7.717045e-52 | -8.615850e-47 |
| Msa1147900 | Msa1406430 | 0.818855 | 1.576641e-52 | -8.615850e-47 |
| Msa1160590 | Msa1406430 | 0.822251 | 2.618462e-53 | -8.615850e-47 |
| Msa1165940 | Msa1406430 | 0.815644 | 8.317871e-52 | -8.615850e-47 |
| Msa1173100 | Msa1406430 | 0.832290 | 1.028354e-55 | -8.615850e-47 |
| Msa1181250 | Msa1406430 | 0.812223 | 4.722724e-51 | -8.615850e-47 |
| Msa1181330 | Msa1406430 | 0.801948 | 7.074461e-49 | -8.615850e-47 |
| Msa1189070 | Msa1406430 | 0.819842 | 9.393341e-53 | -8.615850e-47 |
| Msa1193290 | Msa1406430 | 0.834024 | 3.807480e-56 | -8.615850e-47 |
| Msa1199570 | Msa1406430 | 0.833258 | 5.912625e-56 | -8.615850e-47 |
| Msa1207270 | Msa1406430 | 0.822880 | 1.869413e-53 | -8.615850e-47 |
| Msa1208880 | Msa1406430 | 0.830579 | 2.712884e-55 | -8.615850e-47 |
| Msa1209460 | Msa1406430 | 0.801718 | 7.887615e-49 | -8.615850e-47 |
| Msa1218600 | Msa1406430 | 0.805856 | 1.090454e-49 | -8.615850e-47 |
| Msa1219010 | Msa1406430 | 0.828658 | 7.955137e-55 | -8.615850e-47 |
| Msa1221060 | Msa1406430 | 0.818137 | 2.292901e-52 | -8.615850e-47 |
| Msa0484780 | Msa1406430 | 0.801862 | 7.370603e-49 | -8.615850e-47 |
| Msa0484840 | Msa1406430 | 0.823405 | 1.409822e-53 | -8.615850e-47 |
| Msa0493410 | Msa1406430 | 0.822839 | 1.911041e-53 | -8.615850e-47 |
| Msa0497210 | Msa1406430 | 0.806049 | 9.931608e-50 | -8.615850e-47 |
| Msa0516170 | Msa1406430 | 0.800652 | 1.303377e-48 | -8.615850e-47 |
| Msa0529890 | Msa1406430 | 0.819686 | 1.019272e-52 | -8.615850e-47 |
| Msa0532070 | Msa1406430 | 0.814628 | 1.398733e-51 | -8.615850e-47 |
| Msa0542090 | Msa1406430 | 0.803535 | 3.328975e-49 | -8.615850e-47 |
| Msa0542130 | Msa1406430 | 0.801754 | 7.757359e-49 | -8.615850e-47 |
| Msa0556060 | Msa1406430 | 0.836015 | 1.198791e-56 | -8.615850e-47 |
| Msa0557070 | Msa1406430 | 0.830494 | 2.845141e-55 | -8.615850e-47 |
| Msa0569200 | Msa1406430 | 0.832341 | 9.988212e-56 | -8.615850e-47 |
| Msa0585560 | Msa1406430 | 0.825951 | 3.543040e-54 | -8.615850e-47 |
| Msa0858130 | Msa1406430 | 0.804210 | 2.409474e-49 | -8.615850e-47 |
| Msa0861130 | Msa1406430 | 0.818285 | 2.122677e-52 | -8.615850e-47 |
| Msa0861510 | Msa1406430 | 0.807041 | 6.134729e-50 | -8.615850e-47 |
| Msa0861600 | Msa1406430 | 0.816866 | 4.433048e-52 | -8.615850e-47 |
| Msa0866520 | Msa1406430 | 0.804236 | 2.380456e-49 | -8.615850e-47 |
| Msa0880140 | Msa1406430 | 0.806178 | 9.332444e-50 | -8.615850e-47 |
| Msa0902760 | Msa1406430 | 0.825368 | 4.871065e-54 | -8.615850e-47 |
| Msa0908920 | Msa1406430 | -0.805656 | 1.201718e-49 | -8.615850e-47 |
| Msa0945110 | Msa1406430 | 0.811992 | 5.304028e-51 | -8.615850e-47 |
| Msa0963270 | Msa1406430 | 0.803661 | 3.134583e-49 | -8.615850e-47 |
| Msa0968590 | Msa1406430 | 0.813754 | 2.181436e-51 | -8.615850e-47 |
| Msa0970530 | Msa1406430 | 0.807113 | 5.923790e-50 | -8.615850e-47 |
| Msa0974070 | Msa1406430 | 0.801114 | 1.048708e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1406430 | MtrunA17_Chr5g0436791 | 78.638 | 323 | 11 | 2 | 1 | 265 | 1 | 323 | 1.97e-172 | 478 |
| Msa1406430 | MtrunA17_Chr3g0138631 | 73.375 | 323 | 28 | 2 | 1 | 265 | 1 | 323 | 3.76e-152 | 427 |
| Msa1406430 | MtrunA17_Chr7g0222411 | 67.308 | 104 | 33 | 1 | 11 | 113 | 7 | 110 | 1.12e-41 | 141 |
| Msa1406430 | MtrunA17_Chr7g0272291 | 67.416 | 89 | 28 | 1 | 11 | 98 | 7 | 95 | 3.24e-34 | 119 |
| Msa1406430 | MtrunA17_Chr3g0115971 | 51.724 | 116 | 34 | 2 | 63 | 177 | 8 | 102 | 2.84e-22 | 90.1 |
| Msa1406430 | MtrunA17_Chr1g0168061 | 66.667 | 81 | 17 | 1 | 195 | 265 | 1 | 81 | 1.18e-19 | 80.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1406430 | AT2G40010.1 | 67.508 | 317 | 49 | 2 | 1 | 263 | 1 | 317 | 8.35e-139 | 393 |
| Msa1406430 | AT3G09200.1 | 70.909 | 275 | 32 | 1 | 4 | 230 | 3 | 277 | 4.74e-134 | 381 |
| Msa1406430 | AT3G11250.1 | 70.545 | 275 | 33 | 1 | 4 | 230 | 3 | 277 | 2.23e-133 | 380 |
| Msa1406430 | AT3G09200.2 | 60.000 | 275 | 29 | 2 | 4 | 230 | 3 | 244 | 3.68e-104 | 304 |
Find 88 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTGATTCGGTTGTTCTTA+TGG | 0.196398 | tig0023207:-71502 | Msa1406430:CDS |
| TTCTCGGCTTTGGTTGGTTT+TGG | 0.243035 | tig0023207:+71642 | None:intergenic |
| CTCCCATACCTCTTTCTTCC+AGG | 0.272769 | tig0023207:-71244 | Msa1406430:CDS |
| TCTGATGAGGACATTGGTTT+TGG | 0.301112 | tig0023207:-68026 | Msa1406430:CDS |
| CCCTTCTTGATGAGTTCAAC+AGG | 0.305313 | tig0023207:+71171 | None:intergenic |
| ATCGTAAGCTTGTTTCTTCT+CGG | 0.312192 | tig0023207:+71626 | None:intergenic |
| GGTGATTCGGTTGTTCTTAT+GGG | 0.317103 | tig0023207:-71501 | Msa1406430:CDS |
| TCCTCATCAGATTCTTCTTC+GGG | 0.318279 | tig0023207:+68038 | None:intergenic |
| AGCTTGTTTCTTCTCGGCTT+TGG | 0.324216 | tig0023207:+71632 | None:intergenic |
| GTCCTCATCAGATTCTTCTT+CGG | 0.343197 | tig0023207:+68037 | None:intergenic |
| AATGGTTACTTCACTTTCCT+TGG | 0.348671 | tig0023207:-68258 | Msa1406430:CDS |
| AACCTTATCCCTCTCCTTGT+TGG | 0.367087 | tig0023207:-71411 | Msa1406430:CDS |
| GACCTCCTTGAGGTCTCCTT+TGG | 0.367672 | tig0023207:+71368 | None:intergenic |
| TTCTTCTTCGGGCTCCTCAT+TGG | 0.367790 | tig0023207:+68049 | None:intergenic |
| GGGTCAGGCCCTCTGTTGCC+AGG | 0.369168 | tig0023207:+71267 | None:intergenic |
| CCCTCTCCTTGTTGGAAATG+TGG | 0.387613 | tig0023207:-71403 | Msa1406430:CDS |
| AGCTCCTGCTCGTGTTGGTT+TGG | 0.398892 | tig0023207:-71316 | Msa1406430:CDS |
| TCCTTAACCTTGTCAGCCTC+AGG | 0.406863 | tig0023207:+68140 | None:intergenic |
| CCCTGAGGCTGACAAGGTTA+AGG | 0.407662 | tig0023207:-68141 | Msa1406430:CDS |
| CCTCTCCTTGTTGGAAATGT+GGG | 0.418166 | tig0023207:-71402 | Msa1406430:CDS |
| GGAGGGACAACAACATCAAT+TGG | 0.422188 | tig0023207:+71288 | None:intergenic |
| AGTACCCTTGTTAATCTTTG+TGG | 0.438446 | tig0023207:+71209 | None:intergenic |
| TGGTGGTTTACGTGGTGATT+CGG | 0.441475 | tig0023207:-71514 | Msa1406430:CDS |
| GTACCCTTGTTAATCTTTGT+GGG | 0.449524 | tig0023207:+71210 | None:intergenic |
| GAGGATGCACGCTGAGAAAA+CGG | 0.456339 | tig0023207:-71451 | Msa1406430:CDS |
| GCAGCTACAACAAACTTACT+TGG | 0.458337 | tig0023207:+68104 | None:intergenic |
| TTCCAACAAGGAGAGGGATA+AGG | 0.459106 | tig0023207:+71409 | None:intergenic |
| ATTGATGTTGTTGTCCCTCC+TGG | 0.461091 | tig0023207:-71285 | Msa1406430:CDS |
| CAAGGTTAAGGAGTTCTTGA+AGG | 0.472691 | tig0023207:-68129 | Msa1406430:CDS |
| AAAGAGGTATGGGAGGGGTC+AGG | 0.472711 | tig0023207:+71252 | None:intergenic |
| AGGAGCTCCAACCTTGTACT+TGG | 0.478120 | tig0023207:+71332 | None:intergenic |
| AGGATGCACGCTGAGAAAAC+GGG | 0.480723 | tig0023207:-71450 | Msa1406430:CDS |
| TGTTTCTTCTCGGCTTTGGT+TGG | 0.480748 | tig0023207:+71636 | None:intergenic |
| CAGGCCCTCTGTTGCCAGGA+GGG | 0.481238 | tig0023207:+71271 | None:intergenic |
| CTTGTTGTGAAGTTTGCCAT+TGG | 0.485339 | tig0023207:-68287 | Msa1406430:intron |
| CAGCAGCAGAAACATCAGTC+AGG | 0.493719 | tig0023207:+68072 | None:intergenic |
| TTCTTTCCCTGAGGCTGACA+AGG | 0.513735 | tig0023207:-68147 | Msa1406430:CDS |
| GTTTGCCATTGGTGTCTCAA+TGG | 0.515161 | tig0023207:-68276 | Msa1406430:CDS |
| GTTGGAGCTCCTGCTCGTGT+TGG | 0.519504 | tig0023207:-71321 | Msa1406430:CDS |
| GCAACCAAACCAACACGAGC+AGG | 0.521300 | tig0023207:+71312 | None:intergenic |
| TTGTCCCTCCTGGCAACAGA+GGG | 0.525369 | tig0023207:-71275 | Msa1406430:CDS |
| GAGTGAATTCATCTAGAAGC+TGG | 0.530076 | tig0023207:+71592 | None:intergenic |
| AACCAGCTTCAGAATATTCG+TGG | 0.543257 | tig0023207:-71534 | Msa1406430:CDS |
| CCCTGTTGAACTCATCAAGA+AGG | 0.543687 | tig0023207:-71172 | Msa1406430:CDS |
| GCACCTGGAAGAAAGAGGTA+TGG | 0.548566 | tig0023207:+71241 | None:intergenic |
| TCAGGCCCTCTGTTGCCAGG+AGG | 0.549469 | tig0023207:+71270 | None:intergenic |
| AATATTCGTGGTGGTTTACG+TGG | 0.555191 | tig0023207:-71522 | Msa1406430:CDS |
| TTGTGGGAATGTTGAGCACC+TGG | 0.555236 | tig0023207:+71226 | None:intergenic |
| TGAAGAGGTTGCCAAGTACA+AGG | 0.559975 | tig0023207:-71343 | Msa1406430:CDS |
| GAAGAATCTGATGAGGACAT+TGG | 0.561710 | tig0023207:-68032 | Msa1406430:CDS |
| GAGGTTGCCAAGTACAAGGT+TGG | 0.563956 | tig0023207:-71339 | Msa1406430:CDS |
| CACCTGGAAGAAAGAGGTAT+GGG | 0.565173 | tig0023207:+71242 | None:intergenic |
| GTGATTCGGTTGTTCTTATG+GGG | 0.567097 | tig0023207:-71500 | Msa1406430:CDS |
| CACCACGAATATTCTGAAGC+TGG | 0.570820 | tig0023207:+71532 | None:intergenic |
| AGCAGCAGAAACATCAGTCA+GGG | 0.574191 | tig0023207:+68073 | None:intergenic |
| ATTGTTAATGCTGATAACGT+TGG | 0.574787 | tig0023207:-71561 | Msa1406430:CDS |
| TGAGGTGCAGCAGCGAGTGT+TGG | 0.574957 | tig0023207:+68224 | None:intergenic |
| CATTCCCACAAAGATTAACA+AGG | 0.575244 | tig0023207:-71214 | Msa1406430:CDS |
| GTTGTCCCTCCTGGCAACAG+AGG | 0.582415 | tig0023207:-71276 | Msa1406430:CDS |
| CCTGTTGAACTCATCAAGAA+GGG | 0.586555 | tig0023207:-71171 | Msa1406430:CDS |
| AGCCTCAGGGAAAGAATACT+CGG | 0.591842 | tig0023207:+68154 | None:intergenic |
| CCTCAAGGAGGTCAGTGAAG+AGG | 0.593760 | tig0023207:-71358 | Msa1406430:CDS |
| AGCGAGTGTTGGATAAGAGA+TGG | 0.594113 | tig0023207:+68235 | None:intergenic |
| GTTGAGCACCTGGAAGAAAG+AGG | 0.596639 | tig0023207:+71236 | None:intergenic |
| CCTCTTCACTGACCTCCTTG+AGG | 0.596985 | tig0023207:+71358 | None:intergenic |
| TGTTTCTGCTGCTGCCAATG+AGG | 0.598910 | tig0023207:-68063 | Msa1406430:CDS |
| CAGCTACAACAAACTTACTT+GGG | 0.601933 | tig0023207:+68105 | None:intergenic |
| TGGAAGAAAGAGGTATGGGA+GGG | 0.613861 | tig0023207:+71246 | None:intergenic |
| CCTTCTTGATGAGTTCAACA+GGG | 0.614444 | tig0023207:+71172 | None:intergenic |
| TTTCACCAAAGGAGACCTCA+AGG | 0.617367 | tig0023207:-71373 | Msa1406430:CDS |
| CCTTAACCTTGTCAGCCTCA+GGG | 0.620363 | tig0023207:+68141 | None:intergenic |
| CCACATTTCCAACAAGGAGA+GGG | 0.620458 | tig0023207:+71403 | None:intergenic |
| CTGGAAGAAAGAGGTATGGG+AGG | 0.624147 | tig0023207:+71245 | None:intergenic |
| GGAAGAAAGAGGTATGGGAG+GGG | 0.635124 | tig0023207:+71247 | None:intergenic |
| CCCACATTTCCAACAAGGAG+AGG | 0.636584 | tig0023207:+71402 | None:intergenic |
| GCCCGAAGAAGAATCTGATG+AGG | 0.637782 | tig0023207:-68039 | Msa1406430:CDS |
| CAGCTTCAGAATATTCGTGG+TGG | 0.652956 | tig0023207:-71531 | Msa1406430:CDS |
| ACTCATCAAGAAGGGAGACA+AGG | 0.673191 | tig0023207:-71163 | Msa1406430:intron |
| GGATGCACGCTGAGAAAACG+GGG | 0.678918 | tig0023207:-71449 | Msa1406430:CDS |
| TCAAACCCACATTTCCAACA+AGG | 0.684557 | tig0023207:+71397 | None:intergenic |
| AACCGAGTATTCTTTCCCTG+AGG | 0.686463 | tig0023207:-68156 | Msa1406430:CDS |
| CTTCTTGATGAGTTCAACAG+GGG | 0.687686 | tig0023207:+71173 | None:intergenic |
| TGTTGGATAAGAGATGGCCA+AGG | 0.692916 | tig0023207:+68241 | None:intergenic |
| AGTAACCATTGAGACACCAA+TGG | 0.697332 | tig0023207:+68271 | None:intergenic |
| ATTCCCACAAAGATTAACAA+GGG | 0.700399 | tig0023207:-71213 | Msa1406430:CDS |
| TATGCATTCACGAACATGTG+AGG | 0.724385 | tig0023207:+68206 | None:intergenic |
| CACCAAAGGAGACCTCAAGG+AGG | 0.756266 | tig0023207:-71370 | Msa1406430:CDS |
| CTATGATGAAGAGATCTGTG+AGG | 0.762423 | tig0023207:-71470 | Msa1406430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGAATATTTATATGTTTTT+TGG | + | tig0023207:71097-71116 | None:intergenic | 10.0% |
| !!! | TATATGATGATCTTTTAAAA+GGG | + | tig0023207:70032-70051 | None:intergenic | 15.0% |
| !!! | AATATTTATATGTTTTTTGG+TGG | + | tig0023207:71094-71113 | None:intergenic | 15.0% |
| !! | TTATATTAGACAAGAATTGT+TGG | + | tig0023207:68716-68735 | None:intergenic | 20.0% |
| !! | AATCATAATCATAACATACA+TGG | - | tig0023207:69305-69324 | Msa1406430:intron | 20.0% |
| !!! | CATTATCTTGATTCATTTTA+CGG | - | tig0023207:69371-69390 | Msa1406430:intron | 20.0% |
| !! | TTAATATGTTTAGTAATGCT+TGG | + | tig0023207:69985-70004 | None:intergenic | 20.0% |
| !!! | CTATATGATGATCTTTTAAA+AGG | + | tig0023207:70033-70052 | None:intergenic | 20.0% |
| !!! | CTTTTAAAAGATCATCATAT+AGG | - | tig0023207:70031-70050 | Msa1406430:intron | 20.0% |
| !! | TTTAACATATTTAGTATGCA+TGG | - | tig0023207:70391-70410 | Msa1406430:intron | 20.0% |
| !! | TGAAAACTATTAAAAGTCTA+GGG | + | tig0023207:70449-70468 | None:intergenic | 20.0% |
| !! | ATGAAAACTATTAAAAGTCT+AGG | + | tig0023207:70450-70469 | None:intergenic | 20.0% |
| !! | AATGGAAAATATTTATCATG+AGG | + | tig0023207:71198-71217 | None:intergenic | 20.0% |
| ! | CTTATTTGTTTCAGATAAAC+AGG | + | tig0023207:68832-68851 | None:intergenic | 25.0% |
| !! | CTGTTTATCTGAAACAAATA+AGG | - | tig0023207:68830-68849 | Msa1406430:intron | 25.0% |
| !! | TATCTGAAACAAATAAGGAT+TGG | - | tig0023207:68835-68854 | Msa1406430:intron | 25.0% |
| !! | ATCTGAAACAAATAAGGATT+GGG | - | tig0023207:68836-68855 | Msa1406430:intron | 25.0% |
| !!! | AATACCATTTTTACAAGTTC+TGG | + | tig0023207:70282-70301 | None:intergenic | 25.0% |
| ! | GGATTATCAAGTTTATGTTA+AGG | + | tig0023207:70533-70552 | None:intergenic | 25.0% |
| ! | GAAAGAAGTAATATGAAGAA+TGG | + | tig0023207:70623-70642 | None:intergenic | 25.0% |
| ! | TCATATTACTTCTTTCTCTT+TGG | - | tig0023207:70627-70646 | Msa1406430:intron | 25.0% |
| !!! | TATTTTGGAATCAAGAGTTA+GGG | + | tig0023207:70719-70738 | None:intergenic | 25.0% |
| !!! | TTATTTTGGAATCAAGAGTT+AGG | + | tig0023207:70720-70739 | None:intergenic | 25.0% |
| ! | ATTGTTAATGCTGATAACGT+TGG | - | tig0023207:68094-68113 | Msa1406430:CDS | 30.0% |
| ATTCCCACAAAGATTAACAA+GGG | - | tig0023207:68442-68461 | Msa1406430:intron | 30.0% | |
| ACAACAAGTCCATATGAAAA+TGG | + | tig0023207:68562-68581 | None:intergenic | 30.0% | |
| TTTCTAGATACGTCTAGTAT+GGG | + | tig0023207:68589-68608 | None:intergenic | 30.0% | |
| TTTGTTTCAGATAAACAGGT+TGG | + | tig0023207:68828-68847 | None:intergenic | 30.0% | |
| TCACTGAATAAACAAGATGT+AGG | + | tig0023207:69568-69587 | None:intergenic | 30.0% | |
| TTGTTTATTCAGTGACATGT+GGG | - | tig0023207:69573-69592 | Msa1406430:intron | 30.0% | |
| CATGACTTATATAAAGTAGG+TGG | + | tig0023207:69671-69690 | None:intergenic | 30.0% | |
| CACCTACTTTATATAAGTCA+TGG | - | tig0023207:69669-69688 | Msa1406430:intron | 30.0% | |
| GACCATGACTTATATAAAGT+AGG | + | tig0023207:69674-69693 | None:intergenic | 30.0% | |
| AGCAAGTTATTCTTAAGCAA+GGG | + | tig0023207:69924-69943 | None:intergenic | 30.0% | |
| TAGCAAGTTATTCTTAAGCA+AGG | + | tig0023207:69925-69944 | None:intergenic | 30.0% | |
| AATGCAAGAGAATCAAACTA+GGG | + | tig0023207:70584-70603 | None:intergenic | 30.0% | |
| ATCAAGCAAGAAACAACTAT+GGG | + | tig0023207:70761-70780 | None:intergenic | 30.0% | |
| AATCAAGCAAGAAACAACTA+TGG | + | tig0023207:70762-70781 | None:intergenic | 30.0% | |
| TTATGTTGAACATGCTTCAT+GGG | + | tig0023207:70792-70811 | None:intergenic | 30.0% | |
| !!! | AGGCTTTAGATTGTTGTTTT+GGG | + | tig0023207:70818-70837 | None:intergenic | 30.0% |
| !!! | AAGGCTTTAGATTGTTGTTT+TGG | + | tig0023207:70819-70838 | None:intergenic | 30.0% |
| ! | AGAGATTCAAATCTAAGGTT+TGG | + | tig0023207:70858-70877 | None:intergenic | 30.0% |
| CATGAAGAGATTCAAATCTA+AGG | + | tig0023207:70863-70882 | None:intergenic | 30.0% | |
| GATTTGAATCTCTTCATGAA+AGG | - | tig0023207:70865-70884 | Msa1406430:intron | 30.0% | |
| ACAAGAAAATATGATTGCCA+TGG | - | tig0023207:70944-70963 | Msa1406430:intron | 30.0% | |
| TTGGAGAAAGAAAAAGAGAA+AGG | - | tig0023207:70986-71005 | Msa1406430:intron | 30.0% | |
| TGGAGAAAGAAAAAGAGAAA+GGG | - | tig0023207:70987-71006 | Msa1406430:intron | 30.0% | |
| TACGGATAAAATATCAGTGT+CGG | + | tig0023207:71164-71183 | None:intergenic | 30.0% | |
| GTTCATGGAAAGTAAGTTAA+TGG | + | tig0023207:71216-71235 | None:intergenic | 30.0% | |
| TGTTAGAGGATTAAAGTTCA+TGG | + | tig0023207:71231-71250 | None:intergenic | 30.0% | |
| CGATTGTCTGATAAAAATTC+CGG | - | tig0023207:71251-71270 | Msa1406430:CDS | 30.0% | |
| ! | ATCGTAAGCTTGTTTCTTCT+CGG | + | tig0023207:68032-68051 | None:intergenic | 35.0% |
| CATTCCCACAAAGATTAACA+AGG | - | tig0023207:68441-68460 | Msa1406430:intron | 35.0% | |
| GTACCCTTGTTAATCTTTGT+GGG | + | tig0023207:68448-68467 | None:intergenic | 35.0% | |
| AGTACCCTTGTTAATCTTTG+TGG | + | tig0023207:68449-68468 | None:intergenic | 35.0% | |
| CTTTCTAGATACGTCTAGTA+TGG | + | tig0023207:68590-68609 | None:intergenic | 35.0% | |
| TACCTATAGCCTAGGATTTA+GGG | + | tig0023207:68888-68907 | None:intergenic | 35.0% | |
| TTACCTATAGCCTAGGATTT+AGG | + | tig0023207:68889-68908 | None:intergenic | 35.0% | |
| !! | GGCTCATCTTAACTTGTTAT+AGG | - | tig0023207:69016-69035 | Msa1406430:intron | 35.0% |
| ATCATAAACATAGTCGTGCA+TGG | - | tig0023207:69282-69301 | Msa1406430:intron | 35.0% | |
| CTTGTTTATTCAGTGACATG+TGG | - | tig0023207:69572-69591 | Msa1406430:intron | 35.0% | |
| ATACAAGGGGTTCTCATTAT+GGG | + | tig0023207:69620-69639 | None:intergenic | 35.0% | |
| GTAAACAAGCAAGCATGATT+AGG | + | tig0023207:69718-69737 | None:intergenic | 35.0% | |
| AGTATGAGTTTACCGCTAAT+CGG | + | tig0023207:69759-69778 | None:intergenic | 35.0% | |
| AAGATCATCATATAGGACCT+TGG | - | tig0023207:70038-70057 | Msa1406430:intron | 35.0% | |
| CAGTCCAGAACTTGTAAAAA+TGG | - | tig0023207:70275-70294 | Msa1406430:intron | 35.0% | |
| !! | ACACTTGGTTTGAGGTTTTT+GGG | + | tig0023207:70310-70329 | None:intergenic | 35.0% |
| CCAAAATACTTAGAGACACT+TGG | + | tig0023207:70325-70344 | None:intergenic | 35.0% | |
| ! | CCAAGTGTCTCTAAGTATTT+TGG | - | tig0023207:70322-70341 | Msa1406430:intron | 35.0% |
| TTAGTATGCATGGCAAGAAA+AGG | - | tig0023207:70401-70420 | Msa1406430:intron | 35.0% | |
| AGACATAATCATGATCCCAA+AGG | - | tig0023207:70482-70501 | Msa1406430:intron | 35.0% | |
| GACATAATCATGATCCCAAA+GGG | - | tig0023207:70483-70502 | Msa1406430:intron | 35.0% | |
| !!! | GTTTTGATTGCTTGAGCTTA+GGG | + | tig0023207:70562-70581 | None:intergenic | 35.0% |
| GAATGCAAGAGAATCAAACT+AGG | + | tig0023207:70585-70604 | None:intergenic | 35.0% | |
| GTTTGATTCTCTTGCATTCT+TGG | - | tig0023207:70586-70605 | Msa1406430:intron | 35.0% | |
| GCATGAAGTGGTTTCTTTAT+AGG | + | tig0023207:70659-70678 | None:intergenic | 35.0% | |
| ! | GATGGAAGTTGGGTTTATTT+TGG | + | tig0023207:70734-70753 | None:intergenic | 35.0% |
| TATGTTGAACATGCTTCATG+GGG | + | tig0023207:70791-70810 | None:intergenic | 35.0% | |
| CTTATGTTGAACATGCTTCA+TGG | + | tig0023207:70793-70812 | None:intergenic | 35.0% | |
| ACTAAGCTTCCATAAGTTAG+AGG | - | tig0023207:70910-70929 | Msa1406430:intron | 35.0% | |
| CTTCATGATCCTCTAACTTA+TGG | + | tig0023207:70922-70941 | None:intergenic | 35.0% | |
| CATAAGTTAGAGGATCATGA+AGG | - | tig0023207:70920-70939 | Msa1406430:intron | 35.0% | |
| GAAAATATGATTGCCATGGA+AGG | - | tig0023207:70948-70967 | Msa1406430:intron | 35.0% | |
| AAGGAGAATTAGAGAAGGAT+TGG | - | tig0023207:70967-70986 | Msa1406430:intron | 35.0% | |
| GGAGAAAGAAAAAGAGAAAG+GGG | - | tig0023207:70988-71007 | Msa1406430:intron | 35.0% | |
| TATCCTTTCTCTCTCTATGT+TGG | + | tig0023207:71052-71071 | None:intergenic | 35.0% | |
| ACATAGAGAGAGAAAGGATA+AGG | - | tig0023207:71052-71071 | Msa1406430:intron | 35.0% | |
| CATAGAGAGAGAAAGGATAA+GGG | - | tig0023207:71053-71072 | Msa1406430:intron | 35.0% | |
| TTATCAGACAATCGTGTTAG+AGG | + | tig0023207:71245-71264 | None:intergenic | 35.0% | |
| AATGGTTACTTCACTTTCCT+TGG | - | tig0023207:71397-71416 | Msa1406430:CDS | 35.0% | |
| CAGCTACAACAAACTTACTT+GGG | + | tig0023207:71553-71572 | None:intergenic | 35.0% | |
| !!! | GACATTGGTTTTGGTCTTTT+TGG | - | tig0023207:71638-71657 | Msa1406430:CDS | 35.0% |
| GAGTGAATTCATCTAGAAGC+TGG | + | tig0023207:68066-68085 | None:intergenic | 40.0% | |
| AACCAGCTTCAGAATATTCG+TGG | - | tig0023207:68121-68140 | Msa1406430:CDS | 40.0% | |
| AATATTCGTGGTGGTTTACG+TGG | - | tig0023207:68133-68152 | Msa1406430:CDS | 40.0% | |
| !! | TGGTGATTCGGTTGTTCTTA+TGG | - | tig0023207:68153-68172 | Msa1406430:CDS | 40.0% |
| !! | GGTGATTCGGTTGTTCTTAT+GGG | - | tig0023207:68154-68173 | Msa1406430:CDS | 40.0% |
| !! | GTGATTCGGTTGTTCTTATG+GGG | - | tig0023207:68155-68174 | Msa1406430:CDS | 40.0% |
| CTATGATGAAGAGATCTGTG+AGG | - | tig0023207:68185-68204 | Msa1406430:CDS | 40.0% | |
| TCAAACCCACATTTCCAACA+AGG | + | tig0023207:68261-68280 | None:intergenic | 40.0% | |
| !! | GTGGGTTTGATTTTCACCAA+AGG | - | tig0023207:68271-68290 | Msa1406430:CDS | 40.0% |
| CTTCTTGATGAGTTCAACAG+GGG | + | tig0023207:68485-68504 | None:intergenic | 40.0% | |
| CCTTCTTGATGAGTTCAACA+GGG | + | tig0023207:68486-68505 | None:intergenic | 40.0% | |
| CCTGTTGAACTCATCAAGAA+GGG | - | tig0023207:68484-68503 | Msa1406430:intron | 40.0% | |
| ! | GGCATCAGACCATTTTCATA+TGG | - | tig0023207:68550-68569 | Msa1406430:intron | 40.0% |
| ! | CATGGTGATTACGGATTACA+CGG | + | tig0023207:68750-68769 | None:intergenic | 40.0% |
| ACCTATAGCCTAGGATTTAG+GGG | + | tig0023207:68887-68906 | None:intergenic | 40.0% | |
| ACACACGTATAATCAACCGT+CGG | + | tig0023207:68954-68973 | None:intergenic | 40.0% | |
| ACTTCCTATACGTGTCATGA+CGG | - | tig0023207:69043-69062 | Msa1406430:intron | 40.0% | |
| GCCTAAGCATAACATAGTCA+TGG | - | tig0023207:69116-69135 | Msa1406430:intron | 40.0% | |
| GCCATGACTATGTTATGCTT+AGG | + | tig0023207:69120-69139 | None:intergenic | 40.0% | |
| GTCATGGCATGATTCTAAAC+CGG | - | tig0023207:69132-69151 | Msa1406430:intron | 40.0% | |
| TGATTCTAAACCGGACGATT+AGG | - | tig0023207:69141-69160 | Msa1406430:intron | 40.0% | |
| GATTCTAAACCGGACGATTA+GGG | - | tig0023207:69142-69161 | Msa1406430:intron | 40.0% | |
| ATTCTAAACCGGACGATTAG+GGG | - | tig0023207:69143-69162 | Msa1406430:intron | 40.0% | |
| !! | TTAGTTTTCCCCTAATCGTC+CGG | + | tig0023207:69154-69173 | None:intergenic | 40.0% |
| GGGAAAACTAAGATAGTCGT+CGG | - | tig0023207:69163-69182 | Msa1406430:intron | 40.0% | |
| TCATGTATGGGATTGTTCTC+GGG | + | tig0023207:69417-69436 | None:intergenic | 40.0% | |
| GTCATGTATGGGATTGTTCT+CGG | + | tig0023207:69418-69437 | None:intergenic | 40.0% | |
| AGGTTTCATCGGTCATGTAT+GGG | + | tig0023207:69429-69448 | None:intergenic | 40.0% | |
| TAGGTTTCATCGGTCATGTA+TGG | + | tig0023207:69430-69449 | None:intergenic | 40.0% | |
| GAGAACGATTCAAGCCATAA+GGG | + | tig0023207:69490-69509 | None:intergenic | 40.0% | |
| GATACAAGGGGTTCTCATTA+TGG | + | tig0023207:69621-69640 | None:intergenic | 40.0% | |
| !! | CATGGTCTTGTCATTCATGT+AGG | - | tig0023207:69687-69706 | Msa1406430:intron | 40.0% |
| TCATGCTTGCTTGTTTACCT+CGG | - | tig0023207:69720-69739 | Msa1406430:intron | 40.0% | |
| ACCTTTATCGAACCGATTAG+CGG | - | tig0023207:69744-69763 | Msa1406430:intron | 40.0% | |
| ACTTCGCGTCTTATCATTCT+AGG | - | tig0023207:69845-69864 | Msa1406430:intron | 40.0% | |
| CTTCGCGTCTTATCATTCTA+GGG | - | tig0023207:69846-69865 | Msa1406430:intron | 40.0% | |
| AGTTCTCAACAACTATGTCG+AGG | - | tig0023207:69887-69906 | Msa1406430:intron | 40.0% | |
| GCATGATACGATACGATTTG+GGG | + | tig0023207:69948-69967 | None:intergenic | 40.0% | |
| GGCATGATACGATACGATTT+GGG | + | tig0023207:69949-69968 | None:intergenic | 40.0% | |
| TGGCATGATACGATACGATT+TGG | + | tig0023207:69950-69969 | None:intergenic | 40.0% | |
| ATGCTTGGTACATGAGAGAA+TGG | + | tig0023207:69970-69989 | None:intergenic | 40.0% | |
| ! | TCATATAGGACCTTGGTTTG+AGG | - | tig0023207:70045-70064 | Msa1406430:intron | 40.0% |
| ! | CATATAGGACCTTGGTTTGA+GGG | - | tig0023207:70046-70065 | Msa1406430:intron | 40.0% |
| ! | ATATAGGACCTTGGTTTGAG+GGG | - | tig0023207:70047-70066 | Msa1406430:intron | 40.0% |
| CCATGGCGAGTAAATTTACT+GGG | - | tig0023207:70167-70186 | Msa1406430:intron | 40.0% | |
| CATGGCGAGTAAATTTACTG+GGG | - | tig0023207:70168-70187 | Msa1406430:intron | 40.0% | |
| !! | GACACTTGGTTTGAGGTTTT+TGG | + | tig0023207:70311-70330 | None:intergenic | 40.0% |
| ! | ACTTAGAGACACTTGGTTTG+AGG | + | tig0023207:70318-70337 | None:intergenic | 40.0% |
| ATAATCATGATCCCAAAGGG+TGG | - | tig0023207:70486-70505 | Msa1406430:intron | 40.0% | |
| TAATCATGATCCCAAAGGGT+GGG | - | tig0023207:70487-70506 | Msa1406430:intron | 40.0% | |
| ! | AGATAGTTTTCCCACCCTTT+GGG | + | tig0023207:70500-70519 | None:intergenic | 40.0% |
| ! | TAGATAGTTTTCCCACCCTT+TGG | + | tig0023207:70501-70520 | None:intergenic | 40.0% |
| AAGGGTGGGAAAACTATCTA+TGG | - | tig0023207:70501-70520 | Msa1406430:intron | 40.0% | |
| !!! | GGTTTTGATTGCTTGAGCTT+AGG | + | tig0023207:70563-70582 | None:intergenic | 40.0% |
| AAGAGTTAGGGTTTGGAAGA+TGG | + | tig0023207:70707-70726 | None:intergenic | 40.0% | |
| TGGAATCAAGAGTTAGGGTT+TGG | + | tig0023207:70714-70733 | None:intergenic | 40.0% | |
| ! | TGGTCTTGATCAAGAAGCTA+AGG | + | tig0023207:70838-70857 | None:intergenic | 40.0% |
| CTTCTCTAATTCTCCTTCCA+TGG | + | tig0023207:70964-70983 | None:intergenic | 40.0% | |
| CATGGAAGGAGAATTAGAGA+AGG | - | tig0023207:70962-70981 | Msa1406430:intron | 40.0% | |
| TTGCCAACATAGAGAGAGAA+AGG | - | tig0023207:71046-71065 | Msa1406430:intron | 40.0% | |
| ! | CATGAGGTGTCAGCTTAATA+CGG | + | tig0023207:71182-71201 | None:intergenic | 40.0% |
| AATATCCAGTCTGTCAGTAC+CGG | + | tig0023207:71273-71292 | None:intergenic | 40.0% | |
| CAGACTGGATATTACACTTG+TGG | - | tig0023207:71280-71299 | Msa1406430:CDS | 40.0% | |
| CAATGGCAAACTTCACAACA+AGG | + | tig0023207:71370-71389 | None:intergenic | 40.0% | |
| ! | CTTGTTGTGAAGTTTGCCAT+TGG | - | tig0023207:71368-71387 | Msa1406430:CDS | 40.0% |
| AGTAACCATTGAGACACCAA+TGG | + | tig0023207:71387-71406 | None:intergenic | 40.0% | |
| TATGCATTCACGAACATGTG+AGG | + | tig0023207:71452-71471 | None:intergenic | 40.0% | |
| CAAGGTTAAGGAGTTCTTGA+AGG | - | tig0023207:71526-71545 | Msa1406430:CDS | 40.0% | |
| GCAGCTACAACAAACTTACT+TGG | + | tig0023207:71554-71573 | None:intergenic | 40.0% | |
| TCCTCATCAGATTCTTCTTC+GGG | + | tig0023207:71620-71639 | None:intergenic | 40.0% | |
| GTCCTCATCAGATTCTTCTT+CGG | + | tig0023207:71621-71640 | None:intergenic | 40.0% | |
| GAAGAATCTGATGAGGACAT+TGG | - | tig0023207:71623-71642 | Msa1406430:CDS | 40.0% | |
| !!! | TCTGATGAGGACATTGGTTT+TGG | - | tig0023207:71629-71648 | Msa1406430:CDS | 40.0% |
| !!! | TTCTCGGCTTTGGTTGGTTT+TGG | + | tig0023207:68016-68035 | None:intergenic | 45.0% |
| ! | TGTTTCTTCTCGGCTTTGGT+TGG | + | tig0023207:68022-68041 | None:intergenic | 45.0% |
| ! | AGCTTGTTTCTTCTCGGCTT+TGG | + | tig0023207:68026-68045 | None:intergenic | 45.0% |
| !! | CACCACGAATATTCTGAAGC+TGG | + | tig0023207:68126-68145 | None:intergenic | 45.0% |
| CAGCTTCAGAATATTCGTGG+TGG | - | tig0023207:68124-68143 | Msa1406430:CDS | 45.0% | |
| TGGTGGTTTACGTGGTGATT+CGG | - | tig0023207:68141-68160 | Msa1406430:CDS | 45.0% | |
| AACCTTATCCCTCTCCTTGT+TGG | - | tig0023207:68244-68263 | Msa1406430:CDS | 45.0% | |
| TTCCAACAAGGAGAGGGATA+AGG | + | tig0023207:68249-68268 | None:intergenic | 45.0% | |
| CCACATTTCCAACAAGGAGA+GGG | + | tig0023207:68255-68274 | None:intergenic | 45.0% | |
| CCTCTCCTTGTTGGAAATGT+GGG | - | tig0023207:68253-68272 | Msa1406430:CDS | 45.0% | |
| TTTCACCAAAGGAGACCTCA+AGG | - | tig0023207:68282-68301 | Msa1406430:intron | 45.0% | |
| TGAAGAGGTTGCCAAGTACA+AGG | - | tig0023207:68312-68331 | Msa1406430:intron | 45.0% | |
| GGAGGGACAACAACATCAAT+TGG | + | tig0023207:68370-68389 | None:intergenic | 45.0% | |
| ATTGATGTTGTTGTCCCTCC+TGG | - | tig0023207:68370-68389 | Msa1406430:intron | 45.0% | |
| ! | TGGAAGAAAGAGGTATGGGA+GGG | + | tig0023207:68412-68431 | None:intergenic | 45.0% |
| ! | CACCTGGAAGAAAGAGGTAT+GGG | + | tig0023207:68416-68435 | None:intergenic | 45.0% |
| CCCTGTTGAACTCATCAAGA+AGG | - | tig0023207:68483-68502 | Msa1406430:intron | 45.0% | |
| CCCTTCTTGATGAGTTCAAC+AGG | + | tig0023207:68487-68506 | None:intergenic | 45.0% | |
| ACTCATCAAGAAGGGAGACA+AGG | - | tig0023207:68492-68511 | Msa1406430:intron | 45.0% | |
| ATCAAGAAGGGAGACAAGGT+TGG | - | tig0023207:68496-68515 | Msa1406430:intron | 45.0% | |
| AAATGGTCTGATGCCTAGCT+TGG | + | tig0023207:68545-68564 | None:intergenic | 45.0% | |
| TACTCGCAGCATGGTGATTA+CGG | + | tig0023207:68759-68778 | None:intergenic | 45.0% | |
| CTCTCGCTGAAATATCCATC+CGG | - | tig0023207:68787-68806 | Msa1406430:intron | 45.0% | |
| ! | GATAAACAGGTTGGACGTCA+AGG | + | tig0023207:68819-68838 | None:intergenic | 45.0% |
| AGTGAGTTCCCCTAAATCCT+AGG | - | tig0023207:68876-68895 | Msa1406430:intron | 45.0% | |
| TCCCCTAAATCCTAGGCTAT+AGG | - | tig0023207:68883-68902 | Msa1406430:intron | 45.0% | |
| CTAGGCTATAGGTAACCTCA+GGG | - | tig0023207:68894-68913 | Msa1406430:intron | 45.0% | |
| TAGGCTATAGGTAACCTCAG+GGG | - | tig0023207:68895-68914 | Msa1406430:intron | 45.0% | |
| GTGTCTACAATACAACCCGA+CGG | - | tig0023207:68935-68954 | Msa1406430:intron | 45.0% | |
| CACACGTATAATCAACCGTC+GGG | + | tig0023207:68953-68972 | None:intergenic | 45.0% | |
| GACGGTTGATTATACGTGTG+TGG | - | tig0023207:68953-68972 | Msa1406430:intron | 45.0% | |
| GTGCATACTAGATTCGTCGT+AGG | - | tig0023207:68995-69014 | Msa1406430:intron | 45.0% | |
| TTGACCGTCATGACACGTAT+AGG | + | tig0023207:69050-69069 | None:intergenic | 45.0% | |
| TATACGTGTCATGACGGTCA+AGG | - | tig0023207:69049-69068 | Msa1406430:intron | 45.0% | |
| ATACGTGTCATGACGGTCAA+GGG | - | tig0023207:69050-69069 | Msa1406430:intron | 45.0% | |
| AGAGCGTATTCTTGGCAATG+CGG | + | tig0023207:69086-69105 | None:intergenic | 45.0% | |
| CGATACGTAGAGCGTATTCT+TGG | + | tig0023207:69094-69113 | None:intergenic | 45.0% | |
| AGAATACGCTCTACGTATCG+AGG | - | tig0023207:69094-69113 | Msa1406430:intron | 45.0% | |
| ! | TTCATTTTACGGAAAGCCCC+AGG | - | tig0023207:69382-69401 | Msa1406430:intron | 45.0% |
| CATGTATGGGATTGTTCTCG+GGG | + | tig0023207:69416-69435 | None:intergenic | 45.0% | |
| ATGACCGATGAAACCTAGCA+AGG | - | tig0023207:69433-69452 | Msa1406430:intron | 45.0% | |
| TGACCGATGAAACCTAGCAA+GGG | - | tig0023207:69434-69453 | Msa1406430:intron | 45.0% | |
| GTACCCTTGCTAGGTTTCAT+CGG | + | tig0023207:69440-69459 | None:intergenic | 45.0% | |
| ! | GAAACCTAGCAAGGGTACAT+CGG | - | tig0023207:69442-69461 | Msa1406430:intron | 45.0% |
| GGAGAACGATTCAAGCCATA+AGG | + | tig0023207:69491-69510 | None:intergenic | 45.0% | |
| ATGGCTTGAATCGTTCTCCT+TGG | - | tig0023207:69492-69511 | Msa1406430:intron | 45.0% | |
| TGGCTTGAATCGTTCTCCTT+GGG | - | tig0023207:69493-69512 | Msa1406430:intron | 45.0% | |
| ! | TCTCTTGTTATCCACGTCAG+GGG | + | tig0023207:69537-69556 | None:intergenic | 45.0% |
| ! | GTCTCTTGTTATCCACGTCA+GGG | + | tig0023207:69538-69557 | None:intergenic | 45.0% |
| ! | TGTCTCTTGTTATCCACGTC+AGG | + | tig0023207:69539-69558 | None:intergenic | 45.0% |
| AGGGGTTCTCATTATGGGAA+CGG | + | tig0023207:69615-69634 | None:intergenic | 45.0% | |
| !! | ACCGCTAATCGGTTCGATAA+AGG | + | tig0023207:69748-69767 | None:intergenic | 45.0% |
| ACGTAAAACCCCTCAAACCA+AGG | + | tig0023207:70058-70077 | None:intergenic | 45.0% | |
| !! | AGGTTTTGGCATTCTTCGAG+CGG | + | tig0023207:70105-70124 | None:intergenic | 45.0% |
| !! | ACACATGGTTTGCTCGTTTC+CGG | + | tig0023207:70129-70148 | None:intergenic | 45.0% |
| GCCATGGCGAGTAAATTTAC+TGG | - | tig0023207:70166-70185 | Msa1406430:intron | 45.0% | |
| CCCAGTAAATTTACTCGCCA+TGG | + | tig0023207:70170-70189 | None:intergenic | 45.0% | |
| GCTTGAACTTGTGCATGAAG+TGG | + | tig0023207:70671-70690 | None:intergenic | 45.0% | |
| TATGGGCTTGGATGGAAGTT+GGG | + | tig0023207:70744-70763 | None:intergenic | 45.0% | |
| GAAACAACTATGGGCTTGGA+TGG | + | tig0023207:70752-70771 | None:intergenic | 45.0% | |
| GCAAGAAACAACTATGGGCT+TGG | + | tig0023207:70756-70775 | None:intergenic | 45.0% | |
| TTGAACATGCTTCATGGGGT+TGG | + | tig0023207:70787-70806 | None:intergenic | 45.0% | |
| GTGAGAGAAGAGAAGAGAGA+AGG | - | tig0023207:71012-71031 | Msa1406430:intron | 45.0% | |
| ATTTAGCACGCTTCAGGCAA+GGG | + | tig0023207:71141-71160 | None:intergenic | 45.0% | |
| !! | AAATTCCGGTACTGACAGAC+TGG | - | tig0023207:71265-71284 | Msa1406430:CDS | 45.0% |
| GTCCTCTCTGTGTATGACAA+TGG | - | tig0023207:71302-71321 | Msa1406430:CDS | 45.0% | |
| AGCCATTGTCATACACAGAG+AGG | + | tig0023207:71307-71326 | None:intergenic | 45.0% | |
| CAGTAAGATCCAGAACCTCA+GGG | + | tig0023207:71340-71359 | None:intergenic | 45.0% | |
| TCAGTAAGATCCAGAACCTC+AGG | + | tig0023207:71341-71360 | None:intergenic | 45.0% | |
| !! | TGAGGTTCTGGATCTTACTG+AGG | - | tig0023207:71340-71359 | Msa1406430:CDS | 45.0% |
| ! | GTTTGCCATTGGTGTCTCAA+TGG | - | tig0023207:71379-71398 | Msa1406430:CDS | 45.0% |
| TGTTGGATAAGAGATGGCCA+AGG | + | tig0023207:71417-71436 | None:intergenic | 45.0% | |
| !! | AGCGAGTGTTGGATAAGAGA+TGG | + | tig0023207:71423-71442 | None:intergenic | 45.0% |
| AACCGAGTATTCTTTCCCTG+AGG | - | tig0023207:71499-71518 | Msa1406430:CDS | 45.0% | |
| AGCCTCAGGGAAAGAATACT+CGG | + | tig0023207:71504-71523 | None:intergenic | 45.0% | |
| AGCAGCAGAAACATCAGTCA+GGG | + | tig0023207:71585-71604 | None:intergenic | 45.0% | |
| GAGGATGCACGCTGAGAAAA+CGG | - | tig0023207:68204-68223 | Msa1406430:CDS | 50.0% | |
| AGGATGCACGCTGAGAAAAC+GGG | - | tig0023207:68205-68224 | Msa1406430:CDS | 50.0% | |
| CCCTCTCCTTGTTGGAAATG+TGG | - | tig0023207:68252-68271 | Msa1406430:CDS | 50.0% | |
| CCCACATTTCCAACAAGGAG+AGG | + | tig0023207:68256-68275 | None:intergenic | 50.0% | |
| GAGGTTGCCAAGTACAAGGT+TGG | - | tig0023207:68316-68335 | Msa1406430:intron | 50.0% | |
| AGGAGCTCCAACCTTGTACT+TGG | + | tig0023207:68326-68345 | None:intergenic | 50.0% | |
| ! | GGAAGAAAGAGGTATGGGAG+GGG | + | tig0023207:68411-68430 | None:intergenic | 50.0% |
| ! | CTGGAAGAAAGAGGTATGGG+AGG | + | tig0023207:68413-68432 | None:intergenic | 50.0% |
| CTCCCATACCTCTTTCTTCC+AGG | - | tig0023207:68411-68430 | Msa1406430:intron | 50.0% | |
| GCACCTGGAAGAAAGAGGTA+TGG | + | tig0023207:68417-68436 | None:intergenic | 50.0% | |
| GTTGAGCACCTGGAAGAAAG+AGG | + | tig0023207:68422-68441 | None:intergenic | 50.0% | |
| TTGTGGGAATGTTGAGCACC+TGG | + | tig0023207:68432-68451 | None:intergenic | 50.0% | |
| CCTGAGGTTACCTATAGCCT+AGG | + | tig0023207:68896-68915 | None:intergenic | 50.0% | |
| CCTAGGCTATAGGTAACCTC+AGG | - | tig0023207:68893-68912 | Msa1406430:intron | 50.0% | |
| GTAACCTCAGGGGAAACCTA+CGG | - | tig0023207:68905-68924 | Msa1406430:intron | 50.0% | |
| CGGGTTGTATTGTAGACACG+TGG | + | tig0023207:68934-68953 | None:intergenic | 50.0% | |
| GTGTGGTCATGCTTCCTAGA+CGG | - | tig0023207:68970-68989 | Msa1406430:intron | 50.0% | |
| TCTAGTATGCACGACCGTCT+AGG | + | tig0023207:68987-69006 | None:intergenic | 50.0% | |
| TACGTGTCATGACGGTCAAG+GGG | - | tig0023207:69051-69070 | Msa1406430:intron | 50.0% | |
| ! | ATTTTACGGAAAGCCCCAGG+TGG | - | tig0023207:69385-69404 | Msa1406430:intron | 50.0% |
| ! | CTCTTGTTATCCACGTCAGG+GGG | + | tig0023207:69536-69555 | None:intergenic | 50.0% |
| ! | TCTCTTGCTATCCACACCAG+GGG | + | tig0023207:69644-69663 | None:intergenic | 50.0% |
| ! | GTCTCTTGCTATCCACACCA+GGG | + | tig0023207:69645-69664 | None:intergenic | 50.0% |
| ! | TGTCTCTTGCTATCCACACC+AGG | + | tig0023207:69646-69665 | None:intergenic | 50.0% |
| ! | TCGGTTCGATAAAGGTTCCG+AGG | + | tig0023207:69740-69759 | None:intergenic | 50.0% |
| CGAAGAATGCCAAAACCTGC+CGG | - | tig0023207:70107-70126 | Msa1406430:intron | 50.0% | |
| GGCGAGTAAATTTACTGGGG+AGG | - | tig0023207:70171-70190 | Msa1406430:intron | 50.0% | |
| AGCAGAACGAAGCACAACCA+AGG | + | tig0023207:70237-70256 | None:intergenic | 50.0% | |
| TGCTTGAGCTTAGGGCTTGA+AGG | + | tig0023207:70554-70573 | None:intergenic | 50.0% | |
| CTATGGGCTTGGATGGAAGT+TGG | + | tig0023207:70745-70764 | None:intergenic | 50.0% | |
| GATTTAGCACGCTTCAGGCA+AGG | + | tig0023207:71142-71161 | None:intergenic | 50.0% | |
| TGTCGGATTTAGCACGCTTC+AGG | + | tig0023207:71147-71166 | None:intergenic | 50.0% | |
| TGTGTTTAGCCCTGAGGTTC+TGG | - | tig0023207:71328-71347 | Msa1406430:CDS | 50.0% | |
| TTCTTTCCCTGAGGCTGACA+AGG | - | tig0023207:71508-71527 | Msa1406430:CDS | 50.0% | |
| CCTTAACCTTGTCAGCCTCA+GGG | + | tig0023207:71517-71536 | None:intergenic | 50.0% | |
| TCCTTAACCTTGTCAGCCTC+AGG | + | tig0023207:71518-71537 | None:intergenic | 50.0% | |
| CAGCAGCAGAAACATCAGTC+AGG | + | tig0023207:71586-71605 | None:intergenic | 50.0% | |
| ! | TGTTTCTGCTGCTGCCAATG+AGG | - | tig0023207:71592-71611 | Msa1406430:CDS | 50.0% |
| TTCTTCTTCGGGCTCCTCAT+TGG | + | tig0023207:71609-71628 | None:intergenic | 50.0% | |
| GCCCGAAGAAGAATCTGATG+AGG | - | tig0023207:71616-71635 | Msa1406430:CDS | 50.0% | |
| GGATGCACGCTGAGAAAACG+GGG | - | tig0023207:68206-68225 | Msa1406430:CDS | 55.0% | |
| CACCAAAGGAGACCTCAAGG+AGG | - | tig0023207:68285-68304 | Msa1406430:intron | 55.0% | |
| GACCTCCTTGAGGTCTCCTT+TGG | + | tig0023207:68290-68309 | None:intergenic | 55.0% | |
| CCTCTTCACTGACCTCCTTG+AGG | + | tig0023207:68300-68319 | None:intergenic | 55.0% | |
| CCTCAAGGAGGTCAGTGAAG+AGG | - | tig0023207:68297-68316 | Msa1406430:intron | 55.0% | |
| !! | AGCTCCTGCTCGTGTTGGTT+TGG | - | tig0023207:68339-68358 | Msa1406430:intron | 55.0% |
| GCAACCAAACCAACACGAGC+AGG | + | tig0023207:68346-68365 | None:intergenic | 55.0% | |
| TTGTCCCTCCTGGCAACAGA+GGG | - | tig0023207:68380-68399 | Msa1406430:intron | 55.0% | |
| ! | AAAGAGGTATGGGAGGGGTC+AGG | + | tig0023207:68406-68425 | None:intergenic | 55.0% |
| GTTGCGTTGCTTGCCAAGCT+AGG | - | tig0023207:68529-68548 | Msa1406430:intron | 55.0% | |
| GCTTGTTCGTACTCGCAGCA+TGG | + | tig0023207:68768-68787 | None:intergenic | 55.0% | |
| TTGGACGTCAAGGTAGCAGC+CGG | + | tig0023207:68809-68828 | None:intergenic | 55.0% | |
| TGTAGACACGTGGTGACCGT+AGG | + | tig0023207:68924-68943 | None:intergenic | 55.0% | |
| TTCTCGGGGTTACTCCACCT+GGG | + | tig0023207:69402-69421 | None:intergenic | 55.0% | |
| GAGTCCGATGTACCCTTGCT+AGG | + | tig0023207:69449-69468 | None:intergenic | 55.0% | |
| ! | AAGGGTACATCGGACTCCCT+CGG | - | tig0023207:69452-69471 | Msa1406430:intron | 55.0% |
| TACGAGAGGTTCTCGACCCA+AGG | + | tig0023207:69512-69531 | None:intergenic | 55.0% | |
| AGTGACATGTGGGTCCCTTG+CGG | - | tig0023207:69583-69602 | Msa1406430:intron | 55.0% | |
| TCCACACCAGGGGGATACAA+GGG | + | tig0023207:69634-69653 | None:intergenic | 55.0% | |
| ATCCACACCAGGGGGATACA+AGG | + | tig0023207:69635-69654 | None:intergenic | 55.0% | |
| ! | CTCTTGCTATCCACACCAGG+GGG | + | tig0023207:69643-69662 | None:intergenic | 55.0% |
| ! | TGCTCGTTTCCGGCAGGTTT+TGG | + | tig0023207:70119-70138 | None:intergenic | 55.0% |
| !! | ATGGTTTGCTCGTTTCCGGC+AGG | + | tig0023207:70125-70144 | None:intergenic | 55.0% |
| GCAGACTGTGTGGTCACACA+TGG | + | tig0023207:70144-70163 | None:intergenic | 55.0% | |
| GTTGGAGGTGAGCAGAACCT+TGG | - | tig0023207:70217-70236 | Msa1406430:intron | 55.0% | |
| ! | TGGCTCTGTGTTTAGCCCTG+AGG | - | tig0023207:71322-71341 | Msa1406430:CDS | 55.0% |
| CCCTGAGGCTGACAAGGTTA+AGG | - | tig0023207:71514-71533 | Msa1406430:CDS | 55.0% | |
| GTTGGAGCTCCTGCTCGTGT+TGG | - | tig0023207:68334-68353 | Msa1406430:intron | 60.0% | |
| GTTGTCCCTCCTGGCAACAG+AGG | - | tig0023207:68379-68398 | Msa1406430:intron | 60.0% | |
| ACGTCAAGGTAGCAGCCGGA+TGG | + | tig0023207:68805-68824 | None:intergenic | 60.0% | |
| GTGACCGTAGGTTTCCCCTG+AGG | + | tig0023207:68912-68931 | None:intergenic | 60.0% | |
| TCTCGGGGTTACTCCACCTG+GGG | + | tig0023207:69401-69420 | None:intergenic | 60.0% | |
| GTTCTCGGGGTTACTCCACC+TGG | + | tig0023207:69403-69422 | None:intergenic | 60.0% | |
| GGGAACGGTTCAAGCCGCAA+GGG | + | tig0023207:69600-69619 | None:intergenic | 60.0% | |
| TGGGAACGGTTCAAGCCGCA+AGG | + | tig0023207:69601-69620 | None:intergenic | 60.0% | |
| GAGAACCCCTTGTATCCCCC+TGG | - | tig0023207:69625-69644 | Msa1406430:intron | 60.0% | |
| CCACACCAGGGGGATACAAG+GGG | + | tig0023207:69633-69652 | None:intergenic | 60.0% | |
| ACCACACAGTCTGCTCGCCA+TGG | - | tig0023207:70150-70169 | Msa1406430:intron | 60.0% | |
| AACTGCTCGCCATGGCGAGT+TGG | - | tig0023207:70199-70218 | Msa1406430:intron | 60.0% | |
| TGCTCACCTCCAACTCGCCA+TGG | + | tig0023207:70211-70230 | None:intergenic | 60.0% | |
| GTGCTTCGTTCTGCTCGCTG+TGG | - | tig0023207:70242-70261 | Msa1406430:intron | 60.0% | |
| TGAGGTGCAGCAGCGAGTGT+TGG | + | tig0023207:71434-71453 | None:intergenic | 60.0% | |
| CAGGCCCTCTGTTGCCAGGA+GGG | + | tig0023207:68387-68406 | None:intergenic | 65.0% | |
| TCAGGCCCTCTGTTGCCAGG+AGG | + | tig0023207:68388-68407 | None:intergenic | 65.0% | |
| ! | GGTGTCGTGCGGGTCCCTTA+TGG | - | tig0023207:69473-69492 | Msa1406430:intron | 65.0% |
| CCACGTCAGGGGGATACGAG+AGG | + | tig0023207:69526-69545 | None:intergenic | 65.0% | |
| CCTCTCGTATCCCCCTGACG+TGG | - | tig0023207:69523-69542 | Msa1406430:intron | 65.0% | |
| CCCCTTGTATCCCCCTGGTG+TGG | - | tig0023207:69630-69649 | Msa1406430:intron | 65.0% | |
| GCCATGGCGAGCAGACTGTG+TGG | + | tig0023207:70154-70173 | None:intergenic | 65.0% | |
| AGGCGAGCAACTGCTCGCCA+TGG | - | tig0023207:70191-70210 | Msa1406430:intron | 65.0% | |
| ! | TGCTCGCCATGGCGAGTTGG+AGG | - | tig0023207:70202-70221 | Msa1406430:intron | 65.0% |
| GGGTCAGGCCCTCTGTTGCC+AGG | + | tig0023207:68391-68410 | None:intergenic | 70.0% | |
| !! | CGGACTCCCTCGGTGTCGTG+CGG | - | tig0023207:69462-69481 | Msa1406430:intron | 70.0% |
| !! | GGACTCCCTCGGTGTCGTGC+GGG | - | tig0023207:69463-69482 | Msa1406430:intron | 70.0% |
| AGGGACCCGCACGACACCGA+GGG | + | tig0023207:69471-69490 | None:intergenic | 70.0% | |
| AAGGGACCCGCACGACACCG+AGG | + | tig0023207:69472-69491 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023207 | gene | 68007 | 71670 | 68007 | ID=Msa1406430;Name=Msa1406430 |
| tig0023207 | mRNA | 68007 | 71670 | 68007 | ID=Msa1406430-mRNA-1;Parent=Msa1406430;Name=Msa1406430-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|0|0|1|1|1|2|0|265 |
| tig0023207 | exon | 71164 | 71670 | 71164 | ID=Msa1406430-mRNA-1:exon:24584;Parent=Msa1406430-mRNA-1 |
| tig0023207 | exon | 68007 | 68297 | 68007 | ID=Msa1406430-mRNA-1:exon:24583;Parent=Msa1406430-mRNA-1 |
| tig0023207 | CDS | 71164 | 71670 | 71164 | ID=Msa1406430-mRNA-1:cds;Parent=Msa1406430-mRNA-1 |
| tig0023207 | CDS | 68007 | 68297 | 68007 | ID=Msa1406430-mRNA-1:cds;Parent=Msa1406430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
