AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1129130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1129130 MtrunA17_Chr7g0273761 93.043 460 31 1 2 460 374 833 0.0 895
Msa1129130 MtrunA17_Chr7g0273761 90.291 309 30 0 147 455 32 340 0.0 589
Msa1129130 MtrunA17_Chr7g0273781 77.609 460 102 1 1 460 34 492 0.0 762
Msa1129130 MtrunA17_Chr7g0273791 77.243 457 103 1 1 457 1 456 0.0 754
Msa1129130 MtrunA17_Chr5g0433641 76.087 460 110 0 1 460 1 460 0.0 738
Msa1129130 MtrunA17_Chr7g0273731 76.457 446 104 1 1 446 84 528 0.0 727
Msa1129130 MtrunA17_Chr7g0273721 73.043 460 123 1 2 460 3 462 0.0 712
Msa1129130 MtrunA17_Chr1g0165671 56.867 466 179 7 6 460 23 477 0.0 550
Msa1129130 MtrunA17_Chr1g0165661 52.916 463 201 5 6 460 5 458 1.21e-175 500
Msa1129130 MtrunA17_Chr1g0165681 52.349 447 207 6 6 449 5 448 2.52e-173 494
Msa1129130 MtrunA17_Chr1g0191081 54.222 450 192 7 3 446 11 452 1.57e-165 474
Msa1129130 MtrunA17_Chr1g0165711 49.345 458 184 8 6 460 5 417 1.64e-147 427
Msa1129130 MtrunA17_Chr7g0273741 88.514 148 17 0 1 148 1 148 1.80e-90 271
Msa1129130 MtrunA17_Chr7g0273701 75.862 174 42 0 287 460 1 174 2.31e-89 269
Msa1129130 MtrunA17_Chr6g0471381 53.516 256 111 6 198 449 6 257 9.46e-88 269
Msa1129130 MtrunA17_Chr8g0386141 34.419 430 263 10 14 438 11 426 2.14e-79 253
Msa1129130 MtrunA17_Chr3g0132001 33.099 426 269 8 14 436 18 430 8.25e-79 251
Msa1129130 MtrunA17_Chr7g0224391 32.639 432 264 9 14 436 20 433 1.39e-74 240
Msa1129130 MtrunA17_Chr3g0098961 69.595 148 45 0 1 148 4 151 4.60e-68 215
Msa1129130 MtrunA17_Chr6g0471971 47.257 237 98 5 163 396 2 214 6.66e-65 208
Msa1129130 MtrunA17_Chr6g0471371 61.224 147 57 0 6 152 5 151 6.93e-61 196
Msa1129130 MtrunA17_Chr3g0141851 32.911 395 236 14 13 393 14 393 8.61e-58 197
Msa1129130 MtrunA17_Chr1g0165741 59.441 143 58 0 6 148 5 147 1.11e-56 184
Msa1129130 MtrunA17_Chr2g0306321 29.274 427 284 12 25 438 36 457 2.17e-53 186
Msa1129130 MtrunA17_Chr8g0353421 62.097 124 47 0 6 129 5 128 4.21e-51 169
Msa1129130 MtrunA17_Chr4g0027071 29.515 454 270 15 17 439 19 453 4.29e-51 179
Msa1129130 MtrunA17_Chr2g0334001 29.630 432 278 13 17 436 10 427 6.22e-49 173
Msa1129130 MtrunA17_Chr4g0001861 29.612 412 260 12 42 438 34 430 7.82e-49 172
Msa1129130 MtrunA17_Chr8g0371821 27.209 430 290 11 16 436 9 424 1.04e-44 161
Msa1129130 MtrunA17_Chr7g0273691 69.072 97 30 0 166 262 1 97 4.93e-44 149
Msa1129130 MtrunA17_Chr3g0113821 29.820 389 255 10 17 393 12 394 9.17e-44 159
Msa1129130 MtrunA17_Chr6g0471891 44.503 191 78 4 233 421 1 165 1.66e-42 150
Msa1129130 MtrunA17_Chr7g0270771 30.565 301 164 9 6 292 1 270 1.95e-42 151
Msa1129130 MtrunA17_Chr2g0283361 28.605 430 279 14 31 445 25 441 9.41e-42 154
Msa1129130 MtrunA17_Chr3g0087401 27.632 456 272 16 18 434 10 446 3.71e-38 144
Msa1129130 MtrunA17_Chr7g0253501 28.692 474 251 20 16 434 8 449 5.62e-38 144
Msa1129130 MtrunA17_Chr4g0072041 28.571 427 264 13 36 434 39 452 1.29e-37 142
Msa1129130 MtrunA17_Chr7g0253531 26.752 471 286 19 16 443 8 462 3.43e-36 139
Msa1129130 MtrunA17_Chr4g0054081 26.636 428 280 10 36 438 34 452 3.98e-36 139
Msa1129130 MtrunA17_Chr3g0106691 28.244 393 256 11 17 390 63 448 1.42e-31 126
Msa1129130 MtrunA17_Chr6g0470591 26.980 404 258 17 64 441 70 462 4.24e-31 124
Msa1129130 MtrunA17_Chr3g0106661 26.882 465 283 17 17 441 17 464 9.76e-31 124
Msa1129130 MtrunA17_Chr1g0165721 54.808 104 45 2 348 449 1 104 5.92e-30 112
Msa1129130 MtrunA17_Chr3g0106721 29.841 315 197 10 43 340 41 348 8.05e-30 121
Msa1129130 MtrunA17_Chr5g0442701 27.051 451 284 16 8 426 8 445 2.11e-29 120
Msa1129130 MtrunA17_Chr3g0113181 26.761 426 262 13 53 441 54 466 2.48e-29 119
Msa1129130 MtrunA17_Chr7g0253541 24.703 421 255 18 62 439 57 458 2.54e-29 119
Msa1129130 MtrunA17_Chr7g0252731 26.357 387 249 13 14 391 21 380 6.34e-29 118
Msa1129130 MtrunA17_Chr5g0442691 26.535 456 280 17 8 426 31 468 9.70e-29 118
Msa1129130 MtrunA17_Chr1g0165731 45.299 117 49 3 163 272 2 110 1.05e-28 109
Msa1129130 MtrunA17_Chr3g0106711 35.789 190 112 4 17 198 17 204 1.34e-28 113
Msa1129130 MtrunA17_Chr2g0311401 28.053 303 196 9 146 436 5 297 4.05e-28 113
Msa1129130 MtrunA17_Chr3g0095721 25.735 408 264 11 62 442 69 464 1.15e-25 109
Msa1129130 MtrunA17_Chr7g0235531 24.201 438 273 14 17 422 11 421 2.16e-25 108
Msa1129130 MtrunA17_Chr5g0442721 25.728 412 263 13 62 442 64 463 1.15e-24 106
Msa1129130 MtrunA17_Chr4g0004691 32.530 166 106 2 20 185 14 173 1.58e-24 100
Msa1129130 MtrunA17_Chr3g0134041 27.764 407 240 19 65 444 66 445 4.27e-24 104
Msa1129130 MtrunA17_Chr3g0095731 25.542 415 253 13 65 442 65 460 5.03e-24 104
Msa1129130 MtrunA17_Chr3g0106761 28.857 350 199 17 70 390 19 347 9.93e-24 102
Msa1129130 MtrunA17_Chr7g0273681 80.769 52 10 0 92 143 1 52 1.06e-23 93.6
Msa1129130 MtrunA17_Chr3g0134071 27.790 439 256 23 37 444 44 452 3.34e-23 102
Msa1129130 MtrunA17_Chr3g0106741 29.167 336 198 15 79 390 59 378 3.85e-22 98.6
Msa1129130 MtrunA17_Chr5g0408911 25.758 396 248 15 22 394 32 404 6.45e-22 98.2
Msa1129130 MtrunA17_Chr8g0354371 25.061 411 262 15 13 404 20 403 2.39e-21 96.3
Msa1129130 MtrunA17_Chr3g0134061 26.207 435 271 19 37 441 42 456 2.99e-21 96.3
Msa1129130 MtrunA17_Chr5g0438701 23.608 449 280 20 16 439 9 419 5.90e-21 95.1
Msa1129130 MtrunA17_Chr3g0125001 26.410 390 235 18 24 390 25 385 1.06e-20 94.4
Msa1129130 MtrunA17_Chr7g0273671 93.023 43 3 0 1 43 1 43 1.32e-20 84.7
Msa1129130 MtrunA17_Chr4g0053091 23.762 404 247 13 24 404 32 397 5.31e-20 92.0
Msa1129130 MtrunA17_Chr3g0123061 23.799 437 282 17 16 439 11 409 5.70e-20 91.7
Msa1129130 MtrunA17_Chr3g0134091 26.991 452 263 21 24 443 30 446 2.95e-19 90.1
Msa1129130 MtrunA17_Chr1g0199561 22.459 423 278 14 16 409 9 410 5.49e-19 89.0
Msa1129130 MtrunA17_Chr3g0134121 25.901 444 281 20 25 445 31 449 5.54e-19 89.4
Msa1129130 MtrunA17_Chr5g0438681 27.500 240 154 8 16 252 9 231 9.15e-19 88.2
Msa1129130 MtrunA17_Chr8g0376891 22.391 460 304 15 16 452 9 438 2.10e-18 87.4
Msa1129130 MtrunA17_Chr4g0010381 23.650 389 254 15 24 390 25 392 7.36e-18 85.5
Msa1129130 MtrunA17_Chr3g0134111 25.277 451 274 21 25 445 32 449 2.48e-17 84.0
Msa1129130 MtrunA17_Chr8g0361781 23.077 403 259 14 16 391 9 387 1.65e-16 81.6
Msa1129130 MtrunA17_Chr3g0087221 27.019 322 195 13 24 324 25 327 1.80e-16 81.3
Msa1129130 MtrunA17_Chr8g0361771 22.938 388 252 13 46 409 41 405 2.59e-16 80.9
Msa1129130 MtrunA17_Chr4g0010311 23.136 389 257 15 24 390 25 393 4.08e-16 80.5
Msa1129130 MtrunA17_Chr7g0224131 24.873 394 254 17 24 398 25 395 6.61e-16 79.7
Msa1129130 MtrunA17_Chr8g0376901 23.261 460 298 18 16 451 9 437 1.19e-15 79.0
Msa1129130 MtrunA17_Chr6g0471981 60.784 51 20 0 101 151 1 51 1.34e-15 71.2
Msa1129130 MtrunA17_Chr2g0298091 29.787 141 96 1 49 189 50 187 2.39e-14 74.7
Msa1129130 MtrunA17_Chr2g0311411 32.143 140 91 3 14 153 7 142 1.05e-13 68.6
Msa1129130 MtrunA17_Chr3g0132831 25.946 185 119 3 20 189 5 186 1.45e-13 72.4
Msa1129130 MtrunA17_Chr1g0169471 33.019 106 63 2 81 184 2 101 5.94e-13 65.5
Msa1129130 MtrunA17_Chr5g0438721 31.250 144 75 6 62 199 6 131 4.84e-12 63.5
Msa1129130 MtrunA17_Chr7g0224121 27.389 157 93 7 36 185 39 181 7.74e-12 64.3
Msa1129130 MtrunA17_Chr8g0378151 26.027 146 103 2 39 181 36 179 1.20e-11 66.6
Msa1129130 MtrunA17_Chr5g0414431 57.143 49 16 1 59 107 9 52 2.13e-11 58.9
Msa1129130 MtrunA17_Chr6g0456591 28.571 133 85 5 60 185 64 193 2.33e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1129130 AT5G17540.1 47.109 467 231 9 3 460 2 461 1.29e-144 421
Msa1129130 AT3G03480.1 44.667 450 231 9 2 443 11 450 4.04e-129 382
Msa1129130 AT3G48720.1 30.892 437 286 9 8 441 7 430 4.27e-72 234
Msa1129130 AT5G41040.2 32.715 431 271 10 14 438 21 438 4.17e-71 232
Msa1129130 AT5G41040.1 32.715 431 271 10 14 438 37 454 5.68e-71 232
Msa1129130 AT5G63560.1 31.166 446 279 10 1 439 1 425 4.77e-68 223
Msa1129130 AT1G27620.1 30.858 431 266 12 14 434 13 421 2.25e-56 193
Msa1129130 AT5G48930.1 29.639 415 258 11 41 438 33 430 1.37e-49 175
Msa1129130 AT1G03390.1 29.930 431 269 12 14 426 26 441 4.55e-49 174
Msa1129130 AT2G19070.1 30.023 433 259 14 36 438 29 447 1.45e-46 167
Msa1129130 AT1G28680.1 27.700 426 284 14 31 441 27 443 3.18e-43 158
Msa1129130 AT5G57840.1 28.784 403 252 12 11 391 4 393 5.41e-41 152
Msa1129130 AT3G62160.1 28.774 424 247 14 6 403 1 395 8.51e-40 148
Msa1129130 AT2G40230.1 29.040 396 249 15 17 395 12 392 3.69e-39 147
Msa1129130 AT1G28680.2 29.167 336 226 10 31 360 27 356 4.62e-39 145
Msa1129130 AT5G07080.1 27.533 454 292 14 8 441 12 448 1.63e-38 145
Msa1129130 AT3G47170.1 25.996 477 291 16 8 442 10 466 2.71e-36 139
Msa1129130 AT1G65450.1 27.204 397 249 13 17 392 26 403 2.85e-32 128
Msa1129130 AT2G25150.1 24.838 463 296 17 16 446 19 461 1.42e-29 120
Msa1129130 AT1G32910.1 26.750 400 251 15 63 437 63 445 2.00e-27 114
Msa1129130 AT4G31910.1 26.531 441 284 17 26 438 27 455 2.85e-27 114
Msa1129130 AT1G78990.1 25.301 415 270 12 43 437 45 439 1.93e-26 111
Msa1129130 AT1G31490.1 25.260 384 243 11 31 394 29 388 6.57e-26 110
Msa1129130 AT2G23510.1 26.551 403 245 16 16 390 19 398 7.39e-25 107
Msa1129130 AT5G16410.1 24.745 392 259 12 65 437 91 465 2.27e-24 105
Msa1129130 AT3G26040.1 23.043 460 301 13 16 453 9 437 5.16e-23 101
Msa1129130 AT5G42830.1 27.214 463 269 19 14 442 16 444 1.07e-22 100
Msa1129130 AT4G15390.1 25.169 445 281 19 16 436 14 430 1.55e-22 100
Msa1129130 AT4G15390.2 25.169 445 281 19 16 436 14 430 1.55e-22 100
Msa1129130 AT1G24430.1 25.476 420 248 15 44 438 41 420 1.56e-21 97.1
Msa1129130 AT5G67150.1 24.500 400 253 15 24 400 30 403 1.39e-20 94.4
Msa1129130 AT1G24420.2 27.438 441 265 17 16 434 11 418 3.23e-20 93.2
Msa1129130 AT1G24420.1 27.438 441 265 17 16 434 11 418 3.23e-20 93.2
Msa1129130 AT5G07860.1 25.602 457 283 15 14 442 17 444 5.94e-20 92.4
Msa1129130 AT2G39980.1 23.684 418 255 12 65 431 62 466 1.71e-18 88.2
Msa1129130 AT3G30280.1 23.666 431 281 17 16 423 12 417 3.05e-18 87.4
Msa1129130 AT5G07870.1 24.622 463 294 15 13 442 16 456 3.12e-18 87.4
Msa1129130 AT5G23940.1 27.094 406 258 18 53 436 54 443 1.29e-17 85.5
Msa1129130 AT3G50300.1 25.123 406 251 17 24 402 28 407 1.93e-17 84.7
Msa1129130 AT5G07850.1 25.990 404 254 19 62 442 67 448 5.27e-17 83.6
Msa1129130 AT3G50270.1 24.485 388 253 14 24 390 30 398 8.99e-17 82.8
Msa1129130 AT5G23970.1 25.313 399 242 16 16 391 9 374 1.65e-16 82.0
Msa1129130 AT5G67160.1 26.012 346 230 12 59 390 50 383 3.39e-16 80.9
Msa1129130 AT5G47980.1 24.459 462 298 17 14 451 9 443 4.53e-15 77.4
Msa1129130 AT3G23840.1 23.887 247 156 6 39 272 36 263 3.11e-14 74.7
Msa1129130 AT5G47950.1 22.558 430 270 17 16 423 12 400 7.75e-14 73.6
Msa1129130 AT4G15400.1 25.901 444 273 21 16 437 11 420 3.24e-12 68.6
Msa1129130 AT4G13840.1 27.333 150 104 2 39 185 38 185 5.23e-11 64.7

Find 127 sgRNAs with CRISPR-Local

Find 178 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATCGTTGTAGGTTGATTT+TGG 0.190745 7_3:-81091807 None:intergenic
GGCAGATCTTATGGTTATTA+AGG 0.197032 7_3:+81091528 Msa1129130:CDS
ATCCACTTGCGGGAAGAATT+AGG 0.214730 7_3:+81089706 Msa1129130:CDS
TAAATAAATTTGTTGGCTTA+TGG 0.233111 7_3:+81091883 Msa1129130:three_prime_UTR
TCGCCACTTGATGGATATTA+TGG 0.235022 7_3:+81091379 Msa1129130:CDS
TTAATGCACGTTCAAGGTTT+AGG 0.237256 7_3:+81091347 Msa1129130:CDS
GCATTCTTTGGCAGATCTTA+TGG 0.245241 7_3:+81091519 Msa1129130:CDS
AAGTACTCAGAAGTAAATTT+TGG 0.247575 7_3:+81091607 Msa1129130:CDS
TGATTGCGTTAATTTATAAA+TGG 0.253171 7_3:-81089396 None:intergenic
GCACATTTAAGAACCTTAAC+AGG 0.260011 7_3:-81089657 None:intergenic
AATGAGAGACCAATTTATTA+TGG 0.279508 7_3:+81091918 Msa1129130:three_prime_UTR
AATTTATTTAACTTATCTAA+TGG 0.284970 7_3:-81091870 None:intergenic
TAATGCACGTTCAAGGTTTA+GGG 0.290580 7_3:+81091348 Msa1129130:CDS
AGAAGAATACATGCATTCTT+TGG 0.294021 7_3:+81091507 Msa1129130:CDS
GTGTATGGTGGAGTGGTAAA+AGG 0.301086 7_3:+81091643 Msa1129130:CDS
AACTTATTACCATAATAAAT+TGG 0.316387 7_3:-81091927 None:intergenic
GATAAGTTAAATAAATTTGT+TGG 0.334692 7_3:+81091876 Msa1129130:three_prime_UTR
AAGCTTTGCGGAAACCCTTT+AGG 0.345123 7_3:+81091442 Msa1129130:CDS
ATCATTTGTACTTCTTCATC+TGG 0.345335 7_3:-81091316 None:intergenic
GGGTCTTTCTCTACCCTTGA+TGG 0.346824 7_3:-81089636 None:intergenic
TGAAACAATTCATGAATGTA+TGG 0.347707 7_3:+81090990 Msa1129130:CDS
TAACGATAGATAAATATAAT+AGG 0.351117 7_3:-81089609 None:intergenic
GTTTCATTGTGGGCGTAAAC+TGG 0.359119 7_3:+81090939 Msa1129130:CDS
GAACATCGTATATGAGTTCT+TGG 0.374329 7_3:-81089851 None:intergenic
GGATGGGGTGAGGCGGTGTA+TGG 0.375232 7_3:+81091628 Msa1129130:CDS
AAGTTAAAACTTTCCACAAT+AGG 0.375391 7_3:+81091945 Msa1129130:three_prime_UTR
ATGGAACATCACAAACTATA+AGG 0.375658 7_3:-81091851 None:intergenic
TCCACTTGCGGGAAGAATTA+GGG 0.384194 7_3:+81089707 Msa1129130:CDS
GAAGAAAGATTGATGGACTA+TGG 0.390074 7_3:-81091170 None:intergenic
CATGAATGTATGGGCAGAAA+TGG 0.391377 7_3:+81091000 Msa1129130:CDS
CCTGCGGTGGTGACAGCAGC+CGG 0.395402 7_3:-81091418 None:intergenic
GCTAACCATTCGCCACTTGA+TGG 0.395994 7_3:+81091370 Msa1129130:CDS
GATGTAACACTTGATGAATT+TGG 0.399157 7_3:+81089798 Msa1129130:CDS
CATGCAATTGGCGATGCAAC+AGG 0.403226 7_3:+81090965 Msa1129130:CDS
AACCTTCCATTCAACCAGTA+TGG 0.403496 7_3:+81091038 Msa1129130:CDS
TCAATAATTTGTTTCGTGCC+TGG 0.413381 7_3:-81089873 None:intergenic
TGGGGTGAGGCGGTGTATGG+TGG 0.423405 7_3:+81091631 Msa1129130:CDS
TTTCCACTGCATAACCTAAA+GGG 0.424654 7_3:-81091456 None:intergenic
GAAGAGTTAGATAAGATGTT+TGG 0.426938 7_3:+81091781 Msa1129130:CDS
AAGTGTGGTGGTTTCATTGT+GGG 0.430933 7_3:+81090929 Msa1129130:CDS
GTTTATTACTATCCACTTGC+GGG 0.432351 7_3:+81089696 Msa1129130:CDS
TCTTCCTTGTTGATATTTGA+CGG 0.432691 7_3:-81091133 None:intergenic
TCATCCTATTCTGTTCATAC+AGG 0.434182 7_3:+81089896 Msa1129130:CDS
TATTTGACGGAAGTATTTGT+TGG 0.434903 7_3:-81091120 None:intergenic
GTTCTTGGAAGCAAGGGAAT+GGG 0.437641 7_3:-81089836 None:intergenic
CCGGCTGCTGTCACCACCGC+AGG 0.437909 7_3:+81091418 Msa1129130:CDS
GAAGAATTAGGGAGGGAGCT+AGG 0.442327 7_3:+81089718 Msa1129130:CDS
CTGCATTGACGAAGGTGAAA+TGG 0.446524 7_3:-81091232 None:intergenic
GTGTAAAGAAGAAAGATTGA+TGG 0.448040 7_3:-81091177 None:intergenic
GCGGAGGGTCTCTTGCCATT+AGG 0.455363 7_3:-81091072 None:intergenic
AAACTAGGACCAATCGTTGT+AGG 0.458464 7_3:-81091817 None:intergenic
GCATCGTTAATGCACGTTCA+AGG 0.459702 7_3:+81091341 Msa1129130:CDS
ATTTCCACTGCATAACCTAA+AGG 0.460925 7_3:-81091457 None:intergenic
TTCGTACAACTGAACTATCT+TGG 0.473397 7_3:-81089358 None:intergenic
GGGAGCTAGGGACAAGTTGA+TGG 0.473590 7_3:+81089731 Msa1129130:CDS
AAAGCTGGTGGCACCAACTC+TGG 0.474806 7_3:-81089519 None:intergenic
AGTTCTTGGAAGCAAGGGAA+TGG 0.482681 7_3:-81089837 None:intergenic
ATCCCACATAAGAATGCAAA+AGG 0.484239 7_3:+81091700 Msa1129130:CDS
AAGAATTAGGGAGGGAGCTA+GGG 0.488281 7_3:+81089719 Msa1129130:CDS
GAACTCATATACGATGTTCC+AGG 0.488751 7_3:+81089855 Msa1129130:CDS
AGGATCTCTCTGCGCCATAC+TGG 0.495159 7_3:-81091052 None:intergenic
GTAAACTGGAACCATGCAAT+TGG 0.495199 7_3:+81090953 Msa1129130:CDS
GGTGGGGCTGGACCTTTACC+TGG 0.499401 7_3:+81091664 Msa1129130:CDS
TCCGCAAAGCTTCCCTGCGG+TGG 0.499603 7_3:-81091431 None:intergenic
TCTGCGCCATACTGGTTGAA+TGG 0.499989 7_3:-81091044 None:intergenic
TCTATCGTTACGAACCATCA+AGG 0.503853 7_3:+81089622 Msa1129130:CDS
AGTTTAACTTCGCGAGGAGT+GGG 0.506066 7_3:-81089543 None:intergenic
TCCCTAATTCTTCCCGCAAG+TGG 0.509710 7_3:-81089708 None:intergenic
GGAGTGGTAAAAGGTGGGGC+TGG 0.515635 7_3:+81091652 Msa1129130:CDS
ACCACCGCAGGGAAGCTTTG+CGG 0.519285 7_3:+81091430 Msa1129130:CDS
AATAGGTAGTCAATAAAAGT+TGG 0.521730 7_3:+81091962 Msa1129130:three_prime_UTR
ATGGTGGAGTGGTAAAAGGT+GGG 0.522041 7_3:+81091647 Msa1129130:CDS
CAAAATCAACCTACAACGAT+TGG 0.525230 7_3:+81091808 Msa1129130:CDS
TCGCGAGGAGTGGGTAAAGC+TGG 0.526362 7_3:-81089534 None:intergenic
TAGTTTAACTTCGCGAGGAG+TGG 0.531895 7_3:-81089544 None:intergenic
GAAACAATTCATGAATGTAT+GGG 0.532109 7_3:+81090991 Msa1129130:CDS
TGAACCTGTATGAACAGAAT+AGG 0.541680 7_3:-81089900 None:intergenic
AAGAATGCAAAAGGAGGAGA+AGG 0.542764 7_3:+81091709 Msa1129130:CDS
CGCCATACTGGTTGAATGGA+AGG 0.543769 7_3:-81091040 None:intergenic
TTCTTGGAAGCAAGGGAATG+GGG 0.544018 7_3:-81089835 None:intergenic
ATATACGTAGCTCCAGGTAA+AGG 0.544205 7_3:-81091676 None:intergenic
TGTTTATTACTATCCACTTG+CGG 0.545893 7_3:+81089695 Msa1129130:CDS
GGTAGAGAAAGACCCTGTTA+AGG 0.553972 7_3:+81089644 Msa1129130:CDS
ATGGTGGATTGTACTGGTGA+AGG 0.555043 7_3:+81089750 Msa1129130:CDS
TATATGAGTTCTTGGAAGCA+AGG 0.556792 7_3:-81089843 None:intergenic
CTGCGGTGGTGACAGCAGCC+GGG 0.558615 7_3:-81091417 None:intergenic
GCGGAGGTGCCAACCAGAGT+TGG 0.564737 7_3:+81089506 Msa1129130:CDS
TGAGGCGGTGTATGGTGGAG+TGG 0.570853 7_3:+81091636 Msa1129130:CDS
CTGTTGCATCGCCAATTGCA+TGG 0.571678 7_3:-81090964 None:intergenic
CTGGTGGCACCAACTCTGGT+TGG 0.572358 7_3:-81089515 None:intergenic
GATAATAGTTTAACTTCGCG+AGG 0.573152 7_3:-81089549 None:intergenic
TATGGTGGAGTGGTAAAAGG+TGG 0.581935 7_3:+81091646 Msa1129130:CDS
TAACCTCTGAAGTTATGAAG+AGG 0.583920 7_3:+81091752 Msa1129130:CDS
AAGGTAGAGATAACAAAACT+AGG 0.584883 7_3:-81091832 None:intergenic
GGTTGCAAGTAATGCGCGGA+GGG 0.591291 7_3:-81091087 None:intergenic
GGGATTATATACGTAGCTCC+AGG 0.593500 7_3:-81091682 None:intergenic
ATGGCGCAGAGAGATCCTAA+TGG 0.598701 7_3:+81091057 Msa1129130:CDS
AAACCTCTTCATAACTTCAG+AGG 0.602162 7_3:-81091755 None:intergenic
TCTGACATAGATGATCAAGA+AGG 0.602444 7_3:+81089570 Msa1129130:CDS
ATATGAGTTCTTGGAAGCAA+GGG 0.602607 7_3:-81089842 None:intergenic
AAGTTGATGGTGGATTGTAC+TGG 0.603417 7_3:+81089744 Msa1129130:CDS
CTATCGTTACGAACCATCAA+GGG 0.609999 7_3:+81089623 Msa1129130:CDS
CAAGTGTGGTGGTTTCATTG+TGG 0.611937 7_3:+81090928 Msa1129130:CDS
TTACCATAATATCCATCAAG+TGG 0.613197 7_3:-81091382 None:intergenic
TCTTGGAAGCAAGGGAATGG+GGG 0.616445 7_3:-81089834 None:intergenic
AATATCCATCAAGTGGCGAA+TGG 0.617318 7_3:-81091375 None:intergenic
CGAGGAGTGGGTAAAGCTGG+TGG 0.619470 7_3:-81089531 None:intergenic
AAACCCTTTAGGTTATGCAG+TGG 0.626639 7_3:+81091453 Msa1129130:CDS
AGCTAGGGACAAGTTGATGG+TGG 0.631233 7_3:+81089734 Msa1129130:CDS
CCACATAAGAATGCAAAAGG+AGG 0.632833 7_3:+81091703 Msa1129130:CDS
CGGCTGCTGTCACCACCGCA+GGG 0.632979 7_3:+81091419 Msa1129130:CDS
GTATTTGTTGGTATTCACGA+TGG 0.633823 7_3:-81091108 None:intergenic
TGGTGGAGTGGTAAAAGGTG+GGG 0.634490 7_3:+81091648 Msa1129130:CDS
CACATTTAAGAACCTTAACA+GGG 0.639455 7_3:-81089656 None:intergenic
CGAATTGCAGCTATGTGAGA+AGG 0.642140 7_3:-81091199 None:intergenic
CAGATCACACGTCTCAAGTG+TGG 0.657117 7_3:+81090914 Msa1129130:intron
CAAATGTACTGCATTGACGA+AGG 0.667868 7_3:-81091240 None:intergenic
ATCACACGTCTCAAGTGTGG+TGG 0.671401 7_3:+81090917 Msa1129130:CDS
TGTTAATGTTCACAGCGCGG+AGG 0.678502 7_3:+81089490 Msa1129130:CDS
ACTTGCGGGAAGAATTAGGG+AGG 0.685706 7_3:+81089710 Msa1129130:CDS
CTTGCGGGAAGAATTAGGGA+GGG 0.687102 7_3:+81089711 Msa1129130:CDS
CGATGGTTGCAAGTAATGCG+CGG 0.689910 7_3:-81091091 None:intergenic
ACTTCCGTCAAATATCAACA+AGG 0.705210 7_3:+81091129 Msa1129130:CDS
TGGTTGCAAGTAATGCGCGG+AGG 0.705557 7_3:-81091088 None:intergenic
GTATGGGCAGAAATGGCTCG+AGG 0.708290 7_3:+81091007 Msa1129130:CDS
GTTTCCGCAAAGCTTCCCTG+CGG 0.715488 7_3:-81091434 None:intergenic
CATTGTTAATGTTCACAGCG+CGG 0.734245 7_3:+81089487 Msa1129130:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTAAAATTTAAAAGCA+AGG - chr7_3:81090029-81090048 None:intergenic 10.0%
!! AAAAAAGAAAAAAAAAACAT+AGG - chr7_3:81090115-81090134 None:intergenic 10.0%
!! GAAATTAGAATAATAATTAA+AGG + chr7_3:81090465-81090484 Msa1129130:intron 10.0%
!! AAATGATTTAATCTATTATA+TGG + chr7_3:81090665-81090684 Msa1129130:intron 10.0%
!!! AATTTATTTAACTTATCTAA+TGG - chr7_3:81091873-81091892 None:intergenic 10.0%
!! TAACGATAGATAAATATAAT+AGG - chr7_3:81089612-81089631 None:intergenic 15.0%
!!! TTTTGACAGAAAATTAATTA+TGG + chr7_3:81090184-81090203 Msa1129130:intron 15.0%
!! TTTGACAGAAAATTAATTAT+GGG + chr7_3:81090185-81090204 Msa1129130:intron 15.0%
!!! TAATTTTCTTTAATCATTGA+CGG - chr7_3:81090233-81090252 None:intergenic 15.0%
!!! TAAATCTATGAAATTAGTTT+AGG - chr7_3:81090331-81090350 None:intergenic 15.0%
!!! AACAAATATTTCTTTTGTTT+TGG - chr7_3:81090432-81090451 None:intergenic 15.0%
!! ATATGTATATGAAAACATAA+AGG - chr7_3:81090508-81090527 None:intergenic 15.0%
!! GATAAGTTAAATAAATTTGT+TGG + chr7_3:81091876-81091895 Msa1129130:three_prime_UTR 15.0%
!! AACTTATTACCATAATAAAT+TGG - chr7_3:81091930-81091949 None:intergenic 15.0%
!! TGATTGCGTTAATTTATAAA+TGG - chr7_3:81089399-81089418 None:intergenic 20.0%
!! ACAAAAATAGAAGAGTTAAT+AGG - chr7_3:81089452-81089471 None:intergenic 20.0%
!! AAGAAAAAAAAAACATAGGT+TGG - chr7_3:81090111-81090130 None:intergenic 20.0%
!!! TTTTTCCAAAAAATAGTAGT+TGG + chr7_3:81090130-81090149 Msa1129130:intron 20.0%
!!! ATCATTGATTTGAAATTCAA+AGG + chr7_3:81090557-81090576 Msa1129130:intron 20.0%
!!! TAAATAAATTTGTTGGCTTA+TGG + chr7_3:81091883-81091902 Msa1129130:three_prime_UTR 20.0%
!!! ATTGTTATTGCCTACAATTT+TGG + chr7_3:81090069-81090088 Msa1129130:intron 25.0%
! AAATTAATTATGGGTAGAGA+CGG + chr7_3:81090194-81090213 Msa1129130:intron 25.0%
!!! CACATACAGTTAGTTATTTT+AGG + chr7_3:81090286-81090305 Msa1129130:intron 25.0%
! TATTGTTTGGTATGAGATTA+AGG - chr7_3:81090701-81090720 None:intergenic 25.0%
! TTCTATGAACATAGAAAGAA+AGG - chr7_3:81090730-81090749 None:intergenic 25.0%
! ATCAAAAAAGAAAGTTCATG+TGG - chr7_3:81090787-81090806 None:intergenic 25.0%
! TGAAACAATTCATGAATGTA+TGG + chr7_3:81090990-81091009 Msa1129130:CDS 25.0%
! GAAACAATTCATGAATGTAT+GGG + chr7_3:81090991-81091010 Msa1129130:CDS 25.0%
!! AAGTACTCAGAAGTAAATTT+TGG + chr7_3:81091607-81091626 Msa1129130:CDS 25.0%
! AATGAGAGACCAATTTATTA+TGG + chr7_3:81091918-81091937 Msa1129130:three_prime_UTR 25.0%
! AAGTTAAAACTTTCCACAAT+AGG + chr7_3:81091945-81091964 Msa1129130:three_prime_UTR 25.0%
! AATAGGTAGTCAATAAAAGT+TGG + chr7_3:81091962-81091981 Msa1129130:three_prime_UTR 25.0%
CACATTTAAGAACCTTAACA+GGG - chr7_3:81089659-81089678 None:intergenic 30.0%
TGTTTATTACTATCCACTTG+CGG + chr7_3:81089695-81089714 Msa1129130:CDS 30.0%
GATGTAACACTTGATGAATT+TGG + chr7_3:81089798-81089817 Msa1129130:CDS 30.0%
CACAACTTTATGGACAAAAA+TGG - chr7_3:81089987-81090006 None:intergenic 30.0%
TCCAAAAAATAGTAGTTGGA+AGG + chr7_3:81090134-81090153 Msa1129130:intron 30.0%
AGAAAGGCAAGTATATTGTT+TGG - chr7_3:81090714-81090733 None:intergenic 30.0%
ATCACATATACCAAACTGAT+TGG + chr7_3:81090840-81090859 Msa1129130:intron 30.0%
TATACCAAACTGATTGGATT+AGG + chr7_3:81090846-81090865 Msa1129130:intron 30.0%
!! TATTTGACGGAAGTATTTGT+TGG - chr7_3:81091123-81091142 None:intergenic 30.0%
TCTTCCTTGTTGATATTTGA+CGG - chr7_3:81091136-81091155 None:intergenic 30.0%
GTGTAAAGAAGAAAGATTGA+TGG - chr7_3:81091180-81091199 None:intergenic 30.0%
! ATCTTATCACTGCATGTTTT+TGG + chr7_3:81091263-81091282 Msa1129130:CDS 30.0%
ATCATTTGTACTTCTTCATC+TGG - chr7_3:81091319-81091338 None:intergenic 30.0%
TTACCATAATATCCATCAAG+TGG - chr7_3:81091385-81091404 None:intergenic 30.0%
AGAAGAATACATGCATTCTT+TGG + chr7_3:81091507-81091526 Msa1129130:CDS 30.0%
! ACTCAGAAGTAAATTTTGGA+TGG + chr7_3:81091611-81091630 Msa1129130:CDS 30.0%
! CTCAGAAGTAAATTTTGGAT+GGG + chr7_3:81091612-81091631 Msa1129130:CDS 30.0%
! TCAGAAGTAAATTTTGGATG+GGG + chr7_3:81091613-81091632 Msa1129130:CDS 30.0%
GAAGAGTTAGATAAGATGTT+TGG + chr7_3:81091781-81091800 Msa1129130:CDS 30.0%
AAGGTAGAGATAACAAAACT+AGG - chr7_3:81091835-81091854 None:intergenic 30.0%
ATGGAACATCACAAACTATA+AGG - chr7_3:81091854-81091873 None:intergenic 30.0%
!! CTTTTATTGACTACCTATTG+TGG - chr7_3:81091961-81091980 None:intergenic 30.0%
! GATAATAGTTTAACTTCGCG+AGG - chr7_3:81089552-81089571 None:intergenic 35.0%
TCTGACATAGATGATCAAGA+AGG + chr7_3:81089570-81089589 Msa1129130:CDS 35.0%
GCACATTTAAGAACCTTAAC+AGG - chr7_3:81089660-81089679 None:intergenic 35.0%
GTTTATTACTATCCACTTGC+GGG + chr7_3:81089696-81089715 Msa1129130:CDS 35.0%
ATATGAGTTCTTGGAAGCAA+GGG - chr7_3:81089845-81089864 None:intergenic 35.0%
TATATGAGTTCTTGGAAGCA+AGG - chr7_3:81089846-81089865 None:intergenic 35.0%
GAACATCGTATATGAGTTCT+TGG - chr7_3:81089854-81089873 None:intergenic 35.0%
!! TCAATAATTTGTTTCGTGCC+TGG - chr7_3:81089876-81089895 None:intergenic 35.0%
TCATCCTATTCTGTTCATAC+AGG + chr7_3:81089896-81089915 Msa1129130:CDS 35.0%
TGAACCTGTATGAACAGAAT+AGG - chr7_3:81089903-81089922 None:intergenic 35.0%
! TCTCATCCTTAATGTTTTGC+TGG + chr7_3:81089936-81089955 Msa1129130:intron 35.0%
! ATTAAGTCAAAAGTGTGGCT+AGG - chr7_3:81089962-81089981 None:intergenic 35.0%
TGGTGATTAAGTCAAAAGTG+TGG - chr7_3:81089967-81089986 None:intergenic 35.0%
TTGTCTGAGTCACAACTTTA+TGG - chr7_3:81089997-81090016 None:intergenic 35.0%
AACCTAGTCTCCAAAATTGT+AGG - chr7_3:81090082-81090101 None:intergenic 35.0%
!!! GCCTTCCAACTACTATTTTT+TGG - chr7_3:81090138-81090157 None:intergenic 35.0%
! AATTTTGCCTCTCAACTAAC+AGG + chr7_3:81090367-81090386 Msa1129130:intron 35.0%
ACTCAAATGAGTCTCACTAA+AGG - chr7_3:81090585-81090604 None:intergenic 35.0%
TAACATGTAGAAAGTTCACG+TGG - chr7_3:81090816-81090835 None:intergenic 35.0%
ATGTCCTAATCCAATCAGTT+TGG - chr7_3:81090853-81090872 None:intergenic 35.0%
! GTATTTGTTGGTATTCACGA+TGG - chr7_3:81091111-81091130 None:intergenic 35.0%
ACTTCCGTCAAATATCAACA+AGG + chr7_3:81091129-81091148 Msa1129130:CDS 35.0%
!! GAAGAAAGATTGATGGACTA+TGG - chr7_3:81091173-81091192 None:intergenic 35.0%
TTAATGCACGTTCAAGGTTT+AGG + chr7_3:81091347-81091366 Msa1129130:CDS 35.0%
TAATGCACGTTCAAGGTTTA+GGG + chr7_3:81091348-81091367 Msa1129130:CDS 35.0%
TTTCCACTGCATAACCTAAA+GGG - chr7_3:81091459-81091478 None:intergenic 35.0%
ATTTCCACTGCATAACCTAA+AGG - chr7_3:81091460-81091479 None:intergenic 35.0%
GGCAGATCTTATGGTTATTA+AGG + chr7_3:81091528-81091547 Msa1129130:CDS 35.0%
ATCCCACATAAGAATGCAAA+AGG + chr7_3:81091700-81091719 Msa1129130:CDS 35.0%
! CTCCTTTTGCATTCTTATGT+GGG - chr7_3:81091705-81091724 None:intergenic 35.0%
!! TAACCTCTGAAGTTATGAAG+AGG + chr7_3:81091752-81091771 Msa1129130:CDS 35.0%
AAACCTCTTCATAACTTCAG+AGG - chr7_3:81091758-81091777 None:intergenic 35.0%
!!! CAATCGTTGTAGGTTGATTT+TGG - chr7_3:81091810-81091829 None:intergenic 35.0%
CAAAATCAACCTACAACGAT+TGG + chr7_3:81091808-81091827 Msa1129130:CDS 35.0%
CATTGTTAATGTTCACAGCG+CGG + chr7_3:81089487-81089506 Msa1129130:CDS 40.0%
TCTATCGTTACGAACCATCA+AGG + chr7_3:81089622-81089641 Msa1129130:CDS 40.0%
CTATCGTTACGAACCATCAA+GGG + chr7_3:81089623-81089642 Msa1129130:CDS 40.0%
!! AAGTTGATGGTGGATTGTAC+TGG + chr7_3:81089744-81089763 Msa1129130:CDS 40.0%
GAACTCATATACGATGTTCC+AGG + chr7_3:81089855-81089874 Msa1129130:CDS 40.0%
!! TGCCTACAATTTTGGAGACT+AGG + chr7_3:81090077-81090096 Msa1129130:intron 40.0%
!! TCTGTCAAAATCGATTCGAG+TGG - chr7_3:81090174-81090193 None:intergenic 40.0%
TAACAGGCAAGAAGACAAGT+TGG + chr7_3:81090383-81090402 Msa1129130:intron 40.0%
! CTGATTGGATTAGGACATGA+TGG + chr7_3:81090855-81090874 Msa1129130:intron 40.0%
AAGTGTGGTGGTTTCATTGT+GGG + chr7_3:81090929-81090948 Msa1129130:CDS 40.0%
GTAAACTGGAACCATGCAAT+TGG + chr7_3:81090953-81090972 Msa1129130:CDS 40.0%
CATGAATGTATGGGCAGAAA+TGG + chr7_3:81091000-81091019 Msa1129130:CDS 40.0%
AACCTTCCATTCAACCAGTA+TGG + chr7_3:81091038-81091057 Msa1129130:CDS 40.0%
! CAAATGTACTGCATTGACGA+AGG - chr7_3:81091243-81091262 None:intergenic 40.0%
AATATCCATCAAGTGGCGAA+TGG - chr7_3:81091378-81091397 None:intergenic 40.0%
! TCGCCACTTGATGGATATTA+TGG + chr7_3:81091379-81091398 Msa1129130:CDS 40.0%
! TGGTAACTGTTTTGCTTTCC+CGG + chr7_3:81091399-81091418 Msa1129130:CDS 40.0%
! AAACCCTTTAGGTTATGCAG+TGG + chr7_3:81091453-81091472 Msa1129130:CDS 40.0%
GCATTCTTTGGCAGATCTTA+TGG + chr7_3:81091519-81091538 Msa1129130:CDS 40.0%
! AGTAAATTTTGGATGGGGTG+AGG + chr7_3:81091618-81091637 Msa1129130:CDS 40.0%
ATATACGTAGCTCCAGGTAA+AGG - chr7_3:81091679-81091698 None:intergenic 40.0%
! CCTCCTTTTGCATTCTTATG+TGG - chr7_3:81091706-81091725 None:intergenic 40.0%
CCACATAAGAATGCAAAAGG+AGG + chr7_3:81091703-81091722 Msa1129130:CDS 40.0%
AAGAATGCAAAAGGAGGAGA+AGG + chr7_3:81091709-81091728 Msa1129130:CDS 40.0%
AAACTAGGACCAATCGTTGT+AGG - chr7_3:81091820-81091839 None:intergenic 40.0%
! AGTTTAACTTCGCGAGGAGT+GGG - chr7_3:81089546-81089565 None:intergenic 45.0%
! TAGTTTAACTTCGCGAGGAG+TGG - chr7_3:81089547-81089566 None:intergenic 45.0%
GGTAGAGAAAGACCCTGTTA+AGG + chr7_3:81089644-81089663 Msa1129130:CDS 45.0%
ATCCACTTGCGGGAAGAATT+AGG + chr7_3:81089706-81089725 Msa1129130:CDS 45.0%
TCCACTTGCGGGAAGAATTA+GGG + chr7_3:81089707-81089726 Msa1129130:CDS 45.0%
AAGAATTAGGGAGGGAGCTA+GGG + chr7_3:81089719-81089738 Msa1129130:CDS 45.0%
!! ATGGTGGATTGTACTGGTGA+AGG + chr7_3:81089750-81089769 Msa1129130:CDS 45.0%
TTCTTGGAAGCAAGGGAATG+GGG - chr7_3:81089838-81089857 None:intergenic 45.0%
GTTCTTGGAAGCAAGGGAAT+GGG - chr7_3:81089839-81089858 None:intergenic 45.0%
AGTTCTTGGAAGCAAGGGAA+TGG - chr7_3:81089840-81089859 None:intergenic 45.0%
GCTAGGCCAGCAAAACATTA+AGG - chr7_3:81089945-81089964 None:intergenic 45.0%
CTTCTTGCCTGTTAGTTGAG+AGG - chr7_3:81090377-81090396 None:intergenic 45.0%
CAAGTGTGGTGGTTTCATTG+TGG + chr7_3:81090928-81090947 Msa1129130:CDS 45.0%
GTTTCATTGTGGGCGTAAAC+TGG + chr7_3:81090939-81090958 Msa1129130:CDS 45.0%
CGAATTGCAGCTATGTGAGA+AGG - chr7_3:81091202-81091221 None:intergenic 45.0%
! CTGCATTGACGAAGGTGAAA+TGG - chr7_3:81091235-81091254 None:intergenic 45.0%
GCATCGTTAATGCACGTTCA+AGG + chr7_3:81091341-81091360 Msa1129130:CDS 45.0%
AAGCTTTGCGGAAACCCTTT+AGG + chr7_3:81091442-81091461 Msa1129130:CDS 45.0%
! AAATTTTGGATGGGGTGAGG+CGG + chr7_3:81091621-81091640 Msa1129130:CDS 45.0%
! GTGTATGGTGGAGTGGTAAA+AGG + chr7_3:81091643-81091662 Msa1129130:CDS 45.0%
! TATGGTGGAGTGGTAAAAGG+TGG + chr7_3:81091646-81091665 Msa1129130:CDS 45.0%
! ATGGTGGAGTGGTAAAAGGT+GGG + chr7_3:81091647-81091666 Msa1129130:CDS 45.0%
GGGATTATATACGTAGCTCC+AGG - chr7_3:81091685-81091704 None:intergenic 45.0%
TGTTAATGTTCACAGCGCGG+AGG + chr7_3:81089490-81089509 Msa1129130:CDS 50.0%
GGGTCTTTCTCTACCCTTGA+TGG - chr7_3:81089639-81089658 None:intergenic 50.0%
TCCCTAATTCTTCCCGCAAG+TGG - chr7_3:81089711-81089730 None:intergenic 50.0%
ACTTGCGGGAAGAATTAGGG+AGG + chr7_3:81089710-81089729 Msa1129130:CDS 50.0%
CTTGCGGGAAGAATTAGGGA+GGG + chr7_3:81089711-81089730 Msa1129130:CDS 50.0%
GAAGAATTAGGGAGGGAGCT+AGG + chr7_3:81089718-81089737 Msa1129130:CDS 50.0%
!! AGCTAGGGACAAGTTGATGG+TGG + chr7_3:81089734-81089753 Msa1129130:CDS 50.0%
TCTTGGAAGCAAGGGAATGG+GGG - chr7_3:81089837-81089856 None:intergenic 50.0%
CAGATCACACGTCTCAAGTG+TGG + chr7_3:81090914-81090933 Msa1129130:intron 50.0%
ATCACACGTCTCAAGTGTGG+TGG + chr7_3:81090917-81090936 Msa1129130:CDS 50.0%
CTGTTGCATCGCCAATTGCA+TGG - chr7_3:81090967-81090986 None:intergenic 50.0%
CATGCAATTGGCGATGCAAC+AGG + chr7_3:81090965-81090984 Msa1129130:CDS 50.0%
! CGCCATACTGGTTGAATGGA+AGG - chr7_3:81091043-81091062 None:intergenic 50.0%
! TCTGCGCCATACTGGTTGAA+TGG - chr7_3:81091047-81091066 None:intergenic 50.0%
ATGGCGCAGAGAGATCCTAA+TGG + chr7_3:81091057-81091076 Msa1129130:CDS 50.0%
CGATGGTTGCAAGTAATGCG+CGG - chr7_3:81091094-81091113 None:intergenic 50.0%
GCTAACCATTCGCCACTTGA+TGG + chr7_3:81091370-81091389 Msa1129130:CDS 50.0%
TGGTGGAGTGGTAAAAGGTG+GGG + chr7_3:81091648-81091667 Msa1129130:CDS 50.0%
AAAGCTGGTGGCACCAACTC+TGG - chr7_3:81089522-81089541 None:intergenic 55.0%
! GGGAGCTAGGGACAAGTTGA+TGG + chr7_3:81089731-81089750 Msa1129130:CDS 55.0%
AAGCAAGGGAATGGGGGATG+AGG - chr7_3:81089831-81089850 None:intergenic 55.0%
GTATGGGCAGAAATGGCTCG+AGG + chr7_3:81091007-81091026 Msa1129130:CDS 55.0%
AGGATCTCTCTGCGCCATAC+TGG - chr7_3:81091055-81091074 None:intergenic 55.0%
GGTTGCAAGTAATGCGCGGA+GGG - chr7_3:81091090-81091109 None:intergenic 55.0%
TGGTTGCAAGTAATGCGCGG+AGG - chr7_3:81091091-81091110 None:intergenic 55.0%
GTTTCCGCAAAGCTTCCCTG+CGG - chr7_3:81091437-81091456 None:intergenic 55.0%
CTGGTGGCACCAACTCTGGT+TGG - chr7_3:81089518-81089537 None:intergenic 60.0%
CGAGGAGTGGGTAAAGCTGG+TGG - chr7_3:81089534-81089553 None:intergenic 60.0%
TCGCGAGGAGTGGGTAAAGC+TGG - chr7_3:81089537-81089556 None:intergenic 60.0%
GCGGAGGGTCTCTTGCCATT+AGG - chr7_3:81091075-81091094 None:intergenic 60.0%
ACCACCGCAGGGAAGCTTTG+CGG + chr7_3:81091430-81091449 Msa1129130:CDS 60.0%
! TGAGGCGGTGTATGGTGGAG+TGG + chr7_3:81091636-81091655 Msa1129130:CDS 60.0%
GGAGTGGTAAAAGGTGGGGC+TGG + chr7_3:81091652-81091671 Msa1129130:CDS 60.0%
!! GCGGAGGTGCCAACCAGAGT+TGG + chr7_3:81089506-81089525 Msa1129130:CDS 65.0%
TCCGCAAAGCTTCCCTGCGG+TGG - chr7_3:81091434-81091453 None:intergenic 65.0%
GGATGGGGTGAGGCGGTGTA+TGG + chr7_3:81091628-81091647 Msa1129130:CDS 65.0%
TGGGGTGAGGCGGTGTATGG+TGG + chr7_3:81091631-81091650 Msa1129130:CDS 65.0%
GGTGGGGCTGGACCTTTACC+TGG + chr7_3:81091664-81091683 Msa1129130:CDS 65.0%
CTGCGGTGGTGACAGCAGCC+GGG - chr7_3:81091420-81091439 None:intergenic 70.0%
CCTGCGGTGGTGACAGCAGC+CGG - chr7_3:81091421-81091440 None:intergenic 70.0%
CGGCTGCTGTCACCACCGCA+GGG + chr7_3:81091419-81091438 Msa1129130:CDS 70.0%
CCGGCTGCTGTCACCACCGC+AGG + chr7_3:81091418-81091437 Msa1129130:CDS 75.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 81089361 81092052 81089361 ID=Msa1129130;Name=Msa1129130
chr7_3 mRNA 81089361 81092052 81089361 ID=Msa1129130-mRNA-1;Parent=Msa1129130;Name=Msa1129130-mRNA-1;_AED=0.02;_eAED=0.02;_QI=116|1|1|1|1|1|2|194|460
chr7_3 exon 81089361 81089917 81089361 ID=Msa1129130-mRNA-1:exon:23485;Parent=Msa1129130-mRNA-1
chr7_3 exon 81090917 81092052 81090917 ID=Msa1129130-mRNA-1:exon:23486;Parent=Msa1129130-mRNA-1
chr7_3 five_prime_UTR 81089361 81089476 81089361 ID=Msa1129130-mRNA-1:five_prime_utr;Parent=Msa1129130-mRNA-1
chr7_3 CDS 81089477 81089917 81089477 ID=Msa1129130-mRNA-1:cds;Parent=Msa1129130-mRNA-1
chr7_3 CDS 81090917 81091858 81090917 ID=Msa1129130-mRNA-1:cds;Parent=Msa1129130-mRNA-1
chr7_3 three_prime_UTR 81091859 81092052 81091859 ID=Msa1129130-mRNA-1:three_prime_utr;Parent=Msa1129130-mRNA-1
Gene Sequence

>Msa1129130

ATGACTTCGTCATTGTTAATGTTCACAGCGCGGAGGTGCCAACCAGAGTTGGTGCCACCAGCTTTACCCACTCCTCGCGAAGTTAAACTATTATCTGACATAGATGATCAAGAAGGTTTGCGTTTCAATATGCCTATTATATTTATCTATCGTTACGAACCATCAAGGGTAGAGAAAGACCCTGTTAAGGTTCTTAAATGTGCACTCTCAAAAACACTTGTTTATTACTATCCACTTGCGGGAAGAATTAGGGAGGGAGCTAGGGACAAGTTGATGGTGGATTGTACTGGTGAAGGTGTCATGTTCATTGAAGCTGAAGCTGATGTAACACTTGATGAATTTGGTGATGTACCTCATCCCCCATTCCCTTGCTTCCAAGAACTCATATACGATGTTCCAGGCACGAAACAAATTATTGATCATCCTATTCTGTTCATACAGATCACACGTCTCAAGTGTGGTGGTTTCATTGTGGGCGTAAACTGGAACCATGCAATTGGCGATGCAACAGGTTTGAAACAATTCATGAATGTATGGGCAGAAATGGCTCGAGGTGCACATCAACCTTCCATTCAACCAGTATGGCGCAGAGAGATCCTAATGGCAAGAGACCCTCCGCGCATTACTTGCAACCATCGTGAATACCAACAAATACTTCCGTCAAATATCAACAAGGAAGAAGATAATGTTGCTACCATAGTCCATCAATCTTTCTTCTTTACACCTTCTCACATAGCTGCAATTCGTCACTTGATTCCATTTCACCTTCGTCAATGCAGTACATTTGATCTTATCACTGCATGTTTTTGGTGTTGTCGCACAAAAGCATTACAGTTAGAGCCAGATGAAGAAGTACAAATGATGTGCATCGTTAATGCACGTTCAAGGTTTAGGGCTAACCATTCGCCACTTGATGGATATTATGGTAACTGTTTTGCTTTCCCGGCTGCTGTCACCACCGCAGGGAAGCTTTGCGGAAACCCTTTAGGTTATGCAGTGGAAATGATAAGAAAAGCAAAAGCTGAAGTTACAGAAGAATACATGCATTCTTTGGCAGATCTTATGGTTATTAAGGAACGATGTTTATTTACAACAATAAGAGCATGTGTTGTATCAGACTTGACTCGTGCTAAGTACTCAGAAGTAAATTTTGGATGGGGTGAGGCGGTGTATGGTGGAGTGGTAAAAGGTGGGGCTGGACCTTTACCTGGAGCTACGTATATAATCCCACATAAGAATGCAAAAGGAGGAGAAGGTTTGATATTATTAATTTTCTTAACCTCTGAAGTTATGAAGAGGTTTGCTGAAGAGTTAGATAAGATGTTTGGTAACCAAAATCAACCTACAACGATTGGTCCTAGTTTTGTTATCTCTACCTTATAG
Protein sequence

>Msa1129130

MTSSLLMFTARRCQPELVPPALPTPREVKLLSDIDDQEGLRFNMPIIFIYRYEPSRVEKDPVKVLKCALSKTLVYYYPLAGRIREGARDKLMVDCTGEGVMFIEAEADVTLDEFGDVPHPPFPCFQELIYDVPGTKQIIDHPILFIQITRLKCGGFIVGVNWNHAIGDATGLKQFMNVWAEMARGAHQPSIQPVWRREILMARDPPRITCNHREYQQILPSNINKEEDNVATIVHQSFFFTPSHIAAIRHLIPFHLRQCSTFDLITACFWCCRTKALQLEPDEEVQMMCIVNARSRFRANHSPLDGYYGNCFAFPAAVTTAGKLCGNPLGYAVEMIRKAKAEVTEEYMHSLADLMVIKERCLFTTIRACVVSDLTRAKYSEVNFGWGEAVYGGVVKGGAGPLPGATYIIPHKNAKGGEGLILLIFLTSEVMKRFAEELDKMFGNQNQPTTIGPSFVISTL*