Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0562690 | XP_039685309.1 | 97.122 | 139 | 4 | 0 | 2 | 140 | 1 | 139 | 2.04e-93 | 276 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0562690 | A0A396GQD5 | 97.122 | 139 | 4 | 0 | 2 | 140 | 49 | 187 | 4.12e-93 | 276 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010770 | Msa0562690 | 0.803142 | 4.014657e-49 | -8.615850e-47 |
| Msa0016540 | Msa0562690 | 0.807119 | 5.905326e-50 | -8.615850e-47 |
| Msa0017320 | Msa0562690 | 0.823438 | 1.385381e-53 | -8.615850e-47 |
| Msa0022550 | Msa0562690 | 0.819482 | 1.134697e-52 | -8.615850e-47 |
| Msa0023330 | Msa0562690 | 0.801806 | 7.569203e-49 | -8.615850e-47 |
| Msa0026910 | Msa0562690 | 0.803546 | 3.310623e-49 | -8.615850e-47 |
| Msa0030300 | Msa0562690 | 0.839569 | 1.464984e-57 | -8.615850e-47 |
| Msa0031180 | Msa0562690 | 0.806326 | 8.686466e-50 | -8.615850e-47 |
| Msa0032470 | Msa0562690 | 0.813055 | 3.106354e-51 | -8.615850e-47 |
| Msa0042550 | Msa0562690 | 0.805123 | 1.554267e-49 | -8.615850e-47 |
| Msa0043500 | Msa0562690 | 0.850732 | 1.404132e-60 | -8.615850e-47 |
| Msa0043650 | Msa0562690 | 0.839679 | 1.371947e-57 | -8.615850e-47 |
| Msa0047640 | Msa0562690 | 0.816001 | 6.925259e-52 | -8.615850e-47 |
| Msa0051630 | Msa0562690 | 0.838352 | 3.025501e-57 | -8.615850e-47 |
| Msa0051740 | Msa0562690 | 0.843117 | 1.706546e-58 | -8.615850e-47 |
| Msa0051750 | Msa0562690 | 0.830766 | 2.441675e-55 | -8.615850e-47 |
| Msa0054820 | Msa0562690 | 0.844004 | 9.888826e-59 | -8.615850e-47 |
| Msa0071250 | Msa0562690 | 0.830645 | 2.614003e-55 | -8.615850e-47 |
| Msa0074750 | Msa0562690 | 0.814165 | 1.770528e-51 | -8.615850e-47 |
| Msa0077900 | Msa0562690 | 0.825831 | 3.782533e-54 | -8.615850e-47 |
| Msa0078480 | Msa0562690 | 0.810487 | 1.124913e-50 | -8.615850e-47 |
| Msa0081650 | Msa0562690 | 0.825336 | 4.955462e-54 | -8.615850e-47 |
| Msa0089980 | Msa0562690 | 0.800675 | 1.289741e-48 | -8.615850e-47 |
| Msa0096580 | Msa0562690 | 0.805434 | 1.337425e-49 | -8.615850e-47 |
| Msa0097950 | Msa0562690 | 0.815793 | 7.705479e-52 | -8.615850e-47 |
| Msa0100160 | Msa0562690 | 0.845625 | 3.614779e-59 | -8.615850e-47 |
| Msa0102140 | Msa0562690 | 0.810303 | 1.232561e-50 | -8.615850e-47 |
| Msa0104230 | Msa0562690 | 0.817530 | 3.144111e-52 | -8.615850e-47 |
| Msa0105520 | Msa0562690 | 0.808860 | 2.516482e-50 | -8.615850e-47 |
| Msa0106620 | Msa0562690 | 0.851795 | 7.033272e-61 | -8.615850e-47 |
| Msa0106710 | Msa0562690 | 0.833228 | 6.016924e-56 | -8.615850e-47 |
| Msa0127850 | Msa0562690 | 0.814682 | 1.360327e-51 | -8.615850e-47 |
| Msa0138020 | Msa0562690 | 0.815046 | 1.129652e-51 | -8.615850e-47 |
| Msa0138360 | Msa0562690 | 0.802987 | 4.321990e-49 | -8.615850e-47 |
| Msa0141400 | Msa0562690 | 0.836405 | 9.538319e-57 | -8.615850e-47 |
| Msa0142500 | Msa0562690 | 0.828427 | 9.044225e-55 | -8.615850e-47 |
| Msa0143850 | Msa0562690 | 0.806653 | 7.409166e-50 | -8.615850e-47 |
| Msa0146080 | Msa0562690 | 0.832849 | 7.476154e-56 | -8.615850e-47 |
| Msa0147980 | Msa0562690 | 0.810913 | 9.100554e-51 | -8.615850e-47 |
| Msa0149440 | Msa0562690 | 0.806656 | 7.400098e-50 | -8.615850e-47 |
| Msa0171980 | Msa0562690 | 0.804137 | 2.495808e-49 | -8.615850e-47 |
| Msa0178510 | Msa0562690 | 0.801893 | 7.261874e-49 | -8.615850e-47 |
| Msa0186950 | Msa0562690 | 0.809869 | 1.529058e-50 | -8.615850e-47 |
| Msa0189040 | Msa0562690 | 0.810731 | 9.961238e-51 | -8.615850e-47 |
| Msa0189710 | Msa0562690 | 0.800590 | 1.341874e-48 | -8.615850e-47 |
| Msa0197610 | Msa0562690 | 0.800986 | 1.114267e-48 | -8.615850e-47 |
| Msa0205010 | Msa0562690 | 0.837578 | 4.785860e-57 | -8.615850e-47 |
| Msa0207030 | Msa0562690 | 0.843232 | 1.590630e-58 | -8.615850e-47 |
| Msa0225220 | Msa0562690 | 0.819029 | 1.439469e-52 | -8.615850e-47 |
| Msa0225640 | Msa0562690 | 0.808547 | 2.934836e-50 | -8.615850e-47 |
| Msa0227190 | Msa0562690 | 0.805589 | 1.241018e-49 | -8.615850e-47 |
| Msa0232020 | Msa0562690 | 0.820711 | 5.936278e-53 | -8.615850e-47 |
| Msa0233370 | Msa0562690 | 0.831924 | 1.266638e-55 | -8.615850e-47 |
| Msa0237200 | Msa0562690 | 0.825922 | 3.599583e-54 | -8.615850e-47 |
| Msa0237210 | Msa0562690 | 0.807905 | 4.022277e-50 | -8.615850e-47 |
| Msa0238030 | Msa0562690 | 0.811992 | 5.305129e-51 | -8.615850e-47 |
| Msa0376020 | Msa0562690 | 0.802557 | 5.300878e-49 | -8.615850e-47 |
| Msa0378970 | Msa0562690 | 0.857060 | 2.110092e-62 | -8.615850e-47 |
| Msa0382310 | Msa0562690 | 0.806755 | 7.050553e-50 | -8.615850e-47 |
| Msa0387050 | Msa0562690 | 0.818800 | 1.622495e-52 | -8.615850e-47 |
| Msa0389910 | Msa0562690 | 0.840850 | 6.782416e-58 | -8.615850e-47 |
| Msa0390480 | Msa0562690 | 0.812682 | 3.748997e-51 | -8.615850e-47 |
| Msa0391400 | Msa0562690 | 0.806204 | 9.215164e-50 | -8.615850e-47 |
| Msa0394690 | Msa0562690 | 0.831752 | 1.397126e-55 | -8.615850e-47 |
| Msa0395980 | Msa0562690 | 0.827786 | 1.290910e-54 | -8.615850e-47 |
| Msa0408300 | Msa0562690 | 0.810291 | 1.240029e-50 | -8.615850e-47 |
| Msa0413730 | Msa0562690 | 0.803330 | 3.669698e-49 | -8.615850e-47 |
| Msa0422180 | Msa0562690 | 0.801221 | 9.973073e-49 | -8.615850e-47 |
| Msa0427580 | Msa0562690 | 0.816118 | 6.520456e-52 | -8.615850e-47 |
| Msa0428580 | Msa0562690 | 0.854094 | 1.546825e-61 | -8.615850e-47 |
| Msa0430060 | Msa0562690 | 0.820307 | 7.350387e-53 | -8.615850e-47 |
| Msa0430150 | Msa0562690 | 0.818438 | 1.960193e-52 | -8.615850e-47 |
| Msa0431210 | Msa0562690 | 0.812563 | 3.981862e-51 | -8.615850e-47 |
| Msa0432160 | Msa0562690 | 0.809671 | 1.686343e-50 | -8.615850e-47 |
| Msa0440510 | Msa0562690 | 0.805874 | 1.081438e-49 | -8.615850e-47 |
| Msa0450400 | Msa0562690 | -0.803837 | 2.880901e-49 | -8.615850e-47 |
| Msa0473980 | Msa0562690 | 0.812600 | 3.906822e-51 | -8.615850e-47 |
| Msa0474940 | Msa0562690 | 0.841849 | 3.702869e-58 | -8.615850e-47 |
| Msa0476680 | Msa0562690 | 0.814255 | 1.690742e-51 | -8.615850e-47 |
| Msa0480780 | Msa0562690 | 0.848669 | 5.290661e-60 | -8.615850e-47 |
| Msa0481030 | Msa0562690 | 0.821260 | 4.437094e-53 | -8.615850e-47 |
| Msa0481970 | Msa0562690 | 0.801506 | 8.721108e-49 | -8.615850e-47 |
| Msa0240270 | Msa0562690 | 0.802337 | 5.884548e-49 | -8.615850e-47 |
| Msa0240300 | Msa0562690 | 0.810343 | 1.208487e-50 | -8.615850e-47 |
| Msa0240900 | Msa0562690 | 0.803782 | 2.958267e-49 | -8.615850e-47 |
| Msa0241140 | Msa0562690 | 0.819162 | 1.342230e-52 | -8.615850e-47 |
| Msa0244970 | Msa0562690 | 0.800522 | 1.385401e-48 | -8.615850e-47 |
| Msa0244980 | Msa0562690 | 0.822414 | 2.399340e-53 | -8.615850e-47 |
| Msa0247060 | Msa0562690 | 0.812837 | 3.467388e-51 | -8.615850e-47 |
| Msa0249310 | Msa0562690 | 0.802278 | 6.052756e-49 | -8.615850e-47 |
| Msa0262370 | Msa0562690 | 0.806643 | 7.445547e-50 | -8.615850e-47 |
| Msa0274970 | Msa0562690 | 0.826019 | 3.413600e-54 | -8.615850e-47 |
| Msa0274980 | Msa0562690 | 0.802049 | 6.746995e-49 | -8.615850e-47 |
| Msa0283420 | Msa0562690 | 0.833243 | 5.964994e-56 | -8.615850e-47 |
| Msa0285330 | Msa0562690 | 0.861079 | 1.319404e-63 | -8.615850e-47 |
| Msa0296050 | Msa0562690 | -0.802130 | 6.490462e-49 | -8.615850e-47 |
| Msa0303460 | Msa0562690 | 0.815855 | 7.465126e-52 | -8.615850e-47 |
| Msa0303520 | Msa0562690 | 0.815976 | 7.015506e-52 | -8.615850e-47 |
| Msa0307310 | Msa0562690 | 0.827362 | 1.631070e-54 | -8.615850e-47 |
| Msa0308440 | Msa0562690 | 0.819925 | 8.988534e-53 | -8.615850e-47 |
| Msa0310090 | Msa0562690 | 0.804453 | 2.144732e-49 | -8.615850e-47 |
| Msa0311720 | Msa0562690 | 0.824185 | 9.256931e-54 | -8.615850e-47 |
| Msa0315680 | Msa0562690 | 0.825895 | 3.652021e-54 | -8.615850e-47 |
| Msa0315690 | Msa0562690 | 0.811098 | 8.297763e-51 | -8.615850e-47 |
| Msa0317960 | Msa0562690 | 0.800047 | 1.731191e-48 | -8.615850e-47 |
| Msa0317970 | Msa0562690 | 0.811634 | 6.345748e-51 | -8.615850e-47 |
| Msa0321690 | Msa0562690 | 0.808992 | 2.358042e-50 | -8.615850e-47 |
| Msa0322900 | Msa0562690 | 0.841646 | 4.188423e-58 | -8.615850e-47 |
| Msa0324240 | Msa0562690 | 0.865970 | 4.012157e-65 | -8.615850e-47 |
| Msa0333970 | Msa0562690 | -0.821289 | 4.369360e-53 | -8.615850e-47 |
| Msa0342010 | Msa0562690 | 0.821816 | 3.302109e-53 | -8.615850e-47 |
| Msa0347950 | Msa0562690 | 0.812901 | 3.356850e-51 | -8.615850e-47 |
| Msa0347990 | Msa0562690 | 0.811636 | 6.341748e-51 | -8.615850e-47 |
| Msa0482940 | Msa0562690 | 0.805765 | 1.139620e-49 | -8.615850e-47 |
| Msa0483740 | Msa0562690 | 0.818156 | 2.270463e-52 | -8.615850e-47 |
| Msa0491000 | Msa0562690 | 0.817701 | 2.876600e-52 | -8.615850e-47 |
| Msa0500470 | Msa0562690 | 0.812360 | 4.409572e-51 | -8.615850e-47 |
| Msa0514610 | Msa0562690 | 0.800624 | 1.320619e-48 | -8.615850e-47 |
| Msa0516020 | Msa0562690 | 0.800278 | 1.553598e-48 | -8.615850e-47 |
| Msa0518170 | Msa0562690 | 0.831151 | 1.963917e-55 | -8.615850e-47 |
| Msa0518380 | Msa0562690 | 0.800916 | 1.151175e-48 | -8.615850e-47 |
| Msa0518440 | Msa0562690 | 0.824230 | 9.032655e-54 | -8.615850e-47 |
| Msa0520270 | Msa0562690 | 0.801726 | 7.858446e-49 | -8.615850e-47 |
| Msa0521010 | Msa0562690 | 0.809331 | 1.995064e-50 | -8.615850e-47 |
| Msa0523050 | Msa0562690 | 0.836716 | 7.947691e-57 | -8.615850e-47 |
| Msa0523910 | Msa0562690 | 0.809486 | 1.848054e-50 | -8.615850e-47 |
| Msa0526020 | Msa0562690 | 0.844424 | 7.624289e-59 | -8.615850e-47 |
| Msa0531250 | Msa0562690 | 0.827204 | 1.780297e-54 | -8.615850e-47 |
| Msa0532980 | Msa0562690 | 0.842319 | 2.781459e-58 | -8.615850e-47 |
| Msa0538910 | Msa0562690 | 0.812047 | 5.160932e-51 | -8.615850e-47 |
| Msa0544170 | Msa0562690 | 0.828710 | 7.727374e-55 | -8.615850e-47 |
| Msa0544730 | Msa0562690 | 0.834834 | 2.383794e-56 | -8.615850e-47 |
| Msa0557320 | Msa0562690 | 0.812414 | 4.291087e-51 | -8.615850e-47 |
| Msa0560500 | Msa0562690 | 0.866947 | 1.963520e-65 | -8.615850e-47 |
| Msa0562570 | Msa0562690 | 0.860970 | 1.424356e-63 | -8.615850e-47 |
| Msa0562690 | Msa0566350 | 0.829472 | 5.050447e-55 | -8.615850e-47 |
| Msa0562690 | Msa0566750 | 0.833158 | 6.260713e-56 | -8.615850e-47 |
| Msa0562690 | Msa0568680 | 0.815195 | 1.046993e-51 | -8.615850e-47 |
| Msa0562690 | Msa0569780 | 0.811059 | 8.458588e-51 | -8.615850e-47 |
| Msa0562690 | Msa0574390 | 0.803439 | 3.484196e-49 | -8.615850e-47 |
| Msa0562690 | Msa0576680 | 0.815524 | 8.847988e-52 | -8.615850e-47 |
| Msa0562690 | Msa0585070 | 0.801699 | 7.962003e-49 | -8.615850e-47 |
| Msa0562690 | Msa0588090 | 0.839941 | 1.172528e-57 | -8.615850e-47 |
| Msa0562690 | Msa0600070 | 0.811692 | 6.164112e-51 | -8.615850e-47 |
| Msa0562690 | Msa0608270 | 0.812750 | 3.622685e-51 | -8.615850e-47 |
| Msa0562690 | Msa0610250 | 0.849443 | 3.222703e-60 | -8.615850e-47 |
| Msa0562690 | Msa0616640 | 0.855322 | 6.817204e-62 | -8.615850e-47 |
| Msa0562690 | Msa0616810 | 0.822011 | 2.975697e-53 | -8.615850e-47 |
| Msa0562690 | Msa0618950 | 0.861039 | 1.357182e-63 | -8.615850e-47 |
| Msa0562690 | Msa0618970 | 0.856038 | 4.214926e-62 | -8.615850e-47 |
| Msa0562690 | Msa0620230 | 0.816820 | 4.541705e-52 | -8.615850e-47 |
| Msa0562690 | Msa0621600 | 0.811835 | 5.740013e-51 | -8.615850e-47 |
| Msa0562690 | Msa0622120 | 0.841471 | 4.657897e-58 | -8.615850e-47 |
| Msa0562690 | Msa0624060 | 0.827433 | 1.568781e-54 | -8.615850e-47 |
| Msa0562690 | Msa0628420 | 0.836083 | 1.151899e-56 | -8.615850e-47 |
| Msa0562690 | Msa0640940 | 0.800877 | 1.172508e-48 | -8.615850e-47 |
| Msa0562690 | Msa0648830 | 0.817655 | 2.947067e-52 | -8.615850e-47 |
| Msa0562690 | Msa0652690 | 0.851849 | 6.788869e-61 | -8.615850e-47 |
| Msa0562690 | Msa0658590 | 0.808822 | 2.564539e-50 | -8.615850e-47 |
| Msa0562690 | Msa0658680 | 0.834714 | 2.554278e-56 | -8.615850e-47 |
| Msa0562690 | Msa0664540 | 0.805220 | 1.482957e-49 | -8.615850e-47 |
| Msa0562690 | Msa0667770 | 0.835992 | 1.214587e-56 | -8.615850e-47 |
| Msa0562690 | Msa0667790 | 0.841757 | 3.915714e-58 | -8.615850e-47 |
| Msa0562690 | Msa0673120 | 0.805593 | 1.238754e-49 | -8.615850e-47 |
| Msa0562690 | Msa0673270 | 0.803508 | 3.370672e-49 | -8.615850e-47 |
| Msa0562690 | Msa0676130 | 0.816799 | 4.589230e-52 | -8.615850e-47 |
| Msa0562690 | Msa0676180 | 0.816279 | 6.001294e-52 | -8.615850e-47 |
| Msa0562690 | Msa0679360 | 0.802316 | 5.945304e-49 | -8.615850e-47 |
| Msa0562690 | Msa0686080 | 0.844035 | 9.698449e-59 | -8.615850e-47 |
| Msa0562690 | Msa0689250 | 0.812691 | 3.732381e-51 | -8.615850e-47 |
| Msa0562690 | Msa0689440 | 0.802414 | 5.674668e-49 | -8.615850e-47 |
| Msa0562690 | Msa0689760 | 0.801353 | 9.370416e-49 | -8.615850e-47 |
| Msa0562690 | Msa0697720 | 0.837860 | 4.050801e-57 | -8.615850e-47 |
| Msa0562690 | Msa0698100 | 0.800244 | 1.578552e-48 | -8.615850e-47 |
| Msa0562690 | Msa0703440 | 0.840209 | 9.980262e-58 | -8.615850e-47 |
| Msa0562690 | Msa0705390 | 0.835452 | 1.664427e-56 | -8.615850e-47 |
| Msa0562690 | Msa0705990 | 0.804265 | 2.346589e-49 | -8.615850e-47 |
| Msa0562690 | Msa0709160 | 0.819398 | 1.185951e-52 | -8.615850e-47 |
| Msa0562690 | Msa0710270 | 0.829728 | 4.376503e-55 | -8.615850e-47 |
| Msa0562690 | Msa0712560 | 0.826522 | 2.589980e-54 | -8.615850e-47 |
| Msa0562690 | Msa0713340 | 0.801512 | 8.694259e-49 | -8.615850e-47 |
| Msa0562690 | Msa0713510 | 0.808668 | 2.765492e-50 | -8.615850e-47 |
| Msa0562690 | Msa0732600 | 0.818317 | 2.088000e-52 | -8.615850e-47 |
| Msa0562690 | Msa0741070 | 0.826895 | 2.110129e-54 | -8.615850e-47 |
| Msa0562690 | Msa0741440 | 0.808938 | 2.421823e-50 | -8.615850e-47 |
| Msa0562690 | Msa0743530 | 0.805736 | 1.155697e-49 | -8.615850e-47 |
| Msa0562690 | Msa0744100 | 0.832238 | 1.059577e-55 | -8.615850e-47 |
| Msa0562690 | Msa0750250 | 0.809305 | 2.020962e-50 | -8.615850e-47 |
| Msa0562690 | Msa0752700 | 0.811214 | 7.831368e-51 | -8.615850e-47 |
| Msa0562690 | Msa0754930 | 0.801178 | 1.017662e-48 | -8.615850e-47 |
| Msa0562690 | Msa0763890 | 0.804622 | 1.977767e-49 | -8.615850e-47 |
| Msa0562690 | Msa0763920 | 0.819545 | 1.097927e-52 | -8.615850e-47 |
| Msa0562690 | Msa0773590 | 0.813466 | 2.523824e-51 | -8.615850e-47 |
| Msa0562690 | Msa0779260 | 0.814463 | 1.521513e-51 | -8.615850e-47 |
| Msa0562690 | Msa0784480 | 0.816233 | 6.146854e-52 | -8.615850e-47 |
| Msa0562690 | Msa0786750 | 0.809787 | 1.592336e-50 | -8.615850e-47 |
| Msa0562690 | Msa0788120 | 0.806367 | 8.513014e-50 | -8.615850e-47 |
| Msa0562690 | Msa0789560 | 0.804732 | 1.875693e-49 | -8.615850e-47 |
| Msa0562690 | Msa0791090 | 0.809847 | 1.545364e-50 | -8.615850e-47 |
| Msa0562690 | Msa0794970 | 0.812967 | 3.247730e-51 | -8.615850e-47 |
| Msa0562690 | Msa0796250 | 0.808064 | 3.721375e-50 | -8.615850e-47 |
| Msa0562690 | Msa0796300 | 0.810190 | 1.303927e-50 | -8.615850e-47 |
| Msa0562690 | Msa0797250 | 0.825433 | 4.700354e-54 | -8.615850e-47 |
| Msa0562690 | Msa0797930 | 0.824776 | 6.721412e-54 | -8.615850e-47 |
| Msa0562690 | Msa0801730 | 0.804981 | 1.663514e-49 | -8.615850e-47 |
| Msa0562690 | Msa0811040 | 0.815543 | 8.759540e-52 | -8.615850e-47 |
| Msa0562690 | Msa0817650 | 0.807706 | 4.433760e-50 | -8.615850e-47 |
| Msa0562690 | Msa0818060 | 0.805870 | 1.083545e-49 | -8.615850e-47 |
| Msa0562690 | Msa0822500 | 0.829258 | 5.692748e-55 | -8.615850e-47 |
| Msa0562690 | Msa0825270 | 0.819561 | 1.088523e-52 | -8.615850e-47 |
| Msa0562690 | Msa0828680 | 0.808692 | 2.733124e-50 | -8.615850e-47 |
| Msa0562690 | Msa0831100 | 0.828070 | 1.102599e-54 | -8.615850e-47 |
| Msa0562690 | Msa0844110 | 0.820493 | 6.661235e-53 | -8.615850e-47 |
| Msa0562690 | Msa0844280 | 0.801841 | 7.444050e-49 | -8.615850e-47 |
| Msa0562690 | Msa0846230 | 0.802406 | 5.695047e-49 | -8.615850e-47 |
| Msa0562690 | Msa0864420 | 0.824907 | 6.259871e-54 | -8.615850e-47 |
| Msa0562690 | Msa0866400 | 0.803641 | 3.163884e-49 | -8.615850e-47 |
| Msa0562690 | Msa0873860 | 0.810319 | 1.222577e-50 | -8.615850e-47 |
| Msa0562690 | Msa0880450 | 0.807918 | 3.997542e-50 | -8.615850e-47 |
| Msa0562690 | Msa0894710 | 0.802504 | 5.436412e-49 | -8.615850e-47 |
| Msa0562690 | Msa0905750 | 0.814431 | 1.545900e-51 | -8.615850e-47 |
| Msa0562690 | Msa0932350 | 0.816569 | 5.169027e-52 | -8.615850e-47 |
| Msa0562690 | Msa0933760 | 0.813657 | 2.290453e-51 | -8.615850e-47 |
| Msa0562690 | Msa0934140 | 0.805996 | 1.019010e-49 | -8.615850e-47 |
| Msa0562690 | Msa0936390 | 0.801575 | 8.439919e-49 | -8.615850e-47 |
| Msa0562690 | Msa0939000 | 0.818113 | 2.321979e-52 | -8.615850e-47 |
| Msa0562690 | Msa0945240 | 0.854437 | 1.231470e-61 | -8.615850e-47 |
| Msa0562690 | Msa0975940 | 0.818302 | 2.104307e-52 | -8.615850e-47 |
| Msa0562690 | Msa0985220 | 0.809608 | 1.739713e-50 | -8.615850e-47 |
| Msa0562690 | Msa0992580 | 0.800554 | 1.365079e-48 | -8.615850e-47 |
| Msa0562690 | Msa0992600 | 0.812182 | 4.821233e-51 | -8.615850e-47 |
| Msa0562690 | Msa1001390 | 0.800721 | 1.261631e-48 | -8.615850e-47 |
| Msa0562690 | Msa1026640 | 0.801661 | 8.105391e-49 | -8.615850e-47 |
| Msa0562690 | Msa1034500 | 0.831794 | 1.363553e-55 | -8.615850e-47 |
| Msa0562690 | Msa1036300 | 0.803877 | 2.825894e-49 | -8.615850e-47 |
| Msa0562690 | Msa1038080 | 0.809508 | 1.827458e-50 | -8.615850e-47 |
| Msa0562690 | Msa1063420 | 0.821837 | 3.265079e-53 | -8.615850e-47 |
| Msa0562690 | Msa1080490 | 0.819441 | 1.159732e-52 | -8.615850e-47 |
| Msa0562690 | Msa1080960 | 0.802993 | 4.309055e-49 | -8.615850e-47 |
| Msa0562690 | Msa1088410 | 0.813222 | 2.855735e-51 | -8.615850e-47 |
| Msa0562690 | Msa1089320 | 0.806040 | 9.977967e-50 | -8.615850e-47 |
| Msa0562690 | Msa1089450 | 0.810068 | 1.385418e-50 | -8.615850e-47 |
| Msa0562690 | Msa1098890 | 0.814179 | 1.757295e-51 | -8.615850e-47 |
| Msa0562690 | Msa1130530 | 0.814859 | 1.243291e-51 | -8.615850e-47 |
| Msa0562690 | Msa1137780 | 0.820782 | 5.718756e-53 | -8.615850e-47 |
| Msa0562690 | Msa1143020 | 0.803227 | 3.854124e-49 | -8.615850e-47 |
| Msa0562690 | Msa1145810 | 0.810971 | 8.841423e-51 | -8.615850e-47 |
| Msa0562690 | Msa1178580 | 0.828636 | 8.053699e-55 | -8.615850e-47 |
| Msa0562690 | Msa1206650 | 0.830459 | 2.901439e-55 | -8.615850e-47 |
| Msa0562690 | Msa1207310 | 0.831993 | 1.217708e-55 | -8.615850e-47 |
| Msa0562690 | Msa1211340 | 0.814427 | 1.549607e-51 | -8.615850e-47 |
| Msa0562690 | Msa1226470 | 0.811684 | 6.188824e-51 | -8.615850e-47 |
| Msa0562690 | Msa1233850 | 0.826867 | 2.142546e-54 | -8.615850e-47 |
| Msa0562690 | Msa1250110 | 0.826821 | 2.198092e-54 | -8.615850e-47 |
| Msa0562690 | Msa1250730 | 0.826185 | 3.116646e-54 | -8.615850e-47 |
| Msa0562690 | Msa1257070 | 0.816295 | 5.952051e-52 | -8.615850e-47 |
| Msa0562690 | Msa1259640 | 0.802890 | 4.526096e-49 | -8.615850e-47 |
| Msa0562690 | Msa1264420 | 0.831407 | 1.699249e-55 | -8.615850e-47 |
| Msa0562690 | Msa1265280 | 0.814675 | 1.365579e-51 | -8.615850e-47 |
| Msa0562690 | Msa1276150 | 0.827138 | 1.845745e-54 | -8.615850e-47 |
| Msa0562690 | Msa1298100 | 0.828181 | 1.036858e-54 | -8.615850e-47 |
| Msa0562690 | Msa1304940 | 0.835587 | 1.538799e-56 | -8.615850e-47 |
| Msa0562690 | Msa1307180 | 0.824794 | 6.652825e-54 | -8.615850e-47 |
| Msa0562690 | Msa1315750 | 0.837779 | 4.248604e-57 | -8.615850e-47 |
| Msa0562690 | Msa1316360 | 0.822226 | 2.652502e-53 | -8.615850e-47 |
| Msa0562690 | Msa1320820 | 0.831493 | 1.617576e-55 | -8.615850e-47 |
| Msa0562690 | Msa1329790 | 0.806683 | 7.301072e-50 | -8.615850e-47 |
| Msa0562690 | Msa1330270 | 0.802057 | 6.718894e-49 | -8.615850e-47 |
| Msa0562690 | Msa1331320 | 0.809251 | 2.074778e-50 | -8.615850e-47 |
| Msa0562690 | Msa1331350 | 0.809341 | 1.985161e-50 | -8.615850e-47 |
| Msa0562690 | Msa1336040 | 0.805133 | 1.546394e-49 | -8.615850e-47 |
| Msa0562690 | Msa1337480 | 0.836193 | 1.080405e-56 | -8.615850e-47 |
| Msa0562690 | Msa1340200 | 0.808664 | 2.772007e-50 | -8.615850e-47 |
| Msa0562690 | Msa1346840 | 0.805768 | 1.138232e-49 | -8.615850e-47 |
| Msa0562690 | Msa1349450 | 0.817530 | 3.144470e-52 | -8.615850e-47 |
| Msa0562690 | Msa1349520 | 0.817343 | 3.463202e-52 | -8.615850e-47 |
| Msa0562690 | Msa1356610 | 0.843722 | 1.176807e-58 | -8.615850e-47 |
| Msa0562690 | Msa1357080 | 0.808147 | 3.573302e-50 | -8.615850e-47 |
| Msa0562690 | Msa1359560 | 0.846656 | 1.893748e-59 | -8.615850e-47 |
| Msa0562690 | Msa1364210 | 0.805176 | 1.514807e-49 | -8.615850e-47 |
| Msa0562690 | Msa1368430 | 0.812490 | 4.130503e-51 | -8.615850e-47 |
| Msa0562690 | Msa1370590 | 0.809903 | 1.503510e-50 | -8.615850e-47 |
| Msa0562690 | Msa1371240 | 0.803073 | 4.149318e-49 | -8.615850e-47 |
| Msa0562690 | Msa1372280 | 0.808000 | 3.840391e-50 | -8.615850e-47 |
| Msa0562690 | Msa1372290 | 0.805461 | 1.320457e-49 | -8.615850e-47 |
| Msa0562690 | Msa1378410 | 0.827905 | 1.208165e-54 | -8.615850e-47 |
| Msa0562690 | Msa1383230 | 0.811067 | 8.427133e-51 | -8.615850e-47 |
| Msa0562690 | Msa1383740 | 0.823521 | 1.324478e-53 | -8.615850e-47 |
| Msa0562690 | Msa1384100 | 0.810081 | 1.375929e-50 | -8.615850e-47 |
| Msa0562690 | Msa1389850 | 0.803845 | 2.870474e-49 | -8.615850e-47 |
| Msa0562690 | Msa1389880 | 0.815786 | 7.735035e-52 | -8.615850e-47 |
| Msa0562690 | Msa1393840 | -0.806992 | 6.282975e-50 | -8.615850e-47 |
| Msa0562690 | Msa1400120 | 0.801551 | 8.535803e-49 | -8.615850e-47 |
| Msa0562690 | Msa1407190 | 0.835544 | 1.578004e-56 | -8.615850e-47 |
| Msa0562690 | Msa1411950 | 0.812696 | 3.722919e-51 | -8.615850e-47 |
| Msa0562690 | Msa1413380 | 0.825490 | 4.557321e-54 | -8.615850e-47 |
| Msa0562690 | Msa1416260 | 0.835020 | 2.139505e-56 | -8.615850e-47 |
| Msa0562690 | Msa1425260 | 0.803637 | 3.170266e-49 | -8.615850e-47 |
| Msa0562690 | Msa1426570 | 0.803778 | 2.963616e-49 | -8.615850e-47 |
| Msa0562690 | Msa1428780 | 0.806070 | 9.834703e-50 | -8.615850e-47 |
| Msa0562690 | Msa1432130 | 0.842888 | 1.964000e-58 | -8.615850e-47 |
| Msa0562690 | Msa1437330 | 0.822668 | 2.093871e-53 | -8.615850e-47 |
| Msa0562690 | Msa1442790 | 0.830768 | 2.438207e-55 | -8.615850e-47 |
| Msa0562690 | Msa1444120 | 0.811614 | 6.410093e-51 | -8.615850e-47 |
| Msa0562690 | Msa1446780 | 0.806910 | 6.538534e-50 | -8.615850e-47 |
| Msa0562690 | Msa1448490 | 0.808672 | 2.760356e-50 | -8.615850e-47 |
| Msa0562690 | Msa1450720 | 0.831300 | 1.805482e-55 | -8.615850e-47 |
| Msa0562690 | Msa1462360 | 0.803439 | 3.484196e-49 | -8.615850e-47 |
| Msa0562690 | Msa1463030 | 0.810013 | 1.423133e-50 | -8.615850e-47 |
| Msa0562690 | Msa1463900 | 0.807802 | 4.230887e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0562690 | MtrunA17_Chr8g0376391 | 97.122 | 139 | 4 | 0 | 2 | 140 | 49 | 187 | 7.94e-97 | 276 |
| Msa0562690 | MtrunA17_Chr1g0160831 | 67.883 | 137 | 38 | 5 | 1 | 132 | 1 | 136 | 2.01e-56 | 172 |
| Msa0562690 | MtrunA17_Chr3g0110941 | 45.926 | 135 | 68 | 3 | 1 | 133 | 4 | 135 | 5.98e-36 | 120 |
| Msa0562690 | MtrunA17_Chr3g0110951 | 46.154 | 130 | 67 | 2 | 4 | 133 | 9 | 135 | 2.75e-33 | 114 |
| Msa0562690 | MtrunA17_Chr5g0434801 | 58.065 | 62 | 26 | 0 | 17 | 78 | 41 | 102 | 1.44e-20 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0562690 | AT1G70780.1 | 59.286 | 140 | 43 | 5 | 1 | 133 | 2 | 134 | 1.18e-46 | 148 |
| Msa0562690 | AT1G23150.1 | 57.664 | 137 | 50 | 5 | 1 | 132 | 1 | 134 | 4.60e-39 | 129 |
| Msa0562690 | AT5G37730.1 | 50.588 | 85 | 41 | 1 | 16 | 100 | 16 | 99 | 5.58e-25 | 94.4 |
Find 77 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCACAACAATGAATGAAAT+TGG | 0.133236 | 4_1:-62689252 | None:intergenic |
| CTAGAGAACTTCTTTCTTCT+TGG | 0.187706 | 4_1:+62690494 | Msa0562690:exon |
| TTCTTGGAAGATTTGCTATT+TGG | 0.206448 | 4_1:+62690510 | Msa0562690:three_prime_UTR |
| GTTGATCAACATCAATGTTT+TGG | 0.229459 | 4_1:+62689630 | Msa0562690:CDS |
| TGAATTGAATTGAATTGTTC+AGG | 0.235482 | 4_1:-62689425 | None:intergenic |
| GACTTGGCAGCTTAGGGTTC+GGG | 0.235855 | 4_1:-62689106 | None:intergenic |
| CAAAATTGTGGATCTGGTTT+GGG | 0.276369 | 4_1:-62689454 | None:intergenic |
| AGAGAGAGACTTGGCAGCTT+AGG | 0.281694 | 4_1:-62689113 | None:intergenic |
| CGCTGGACCGATTCGATTTG+TGG | 0.324818 | 4_1:+62689657 | Msa0562690:CDS |
| ACAAAATTGTGGATCTGGTT+TGG | 0.332577 | 4_1:-62689455 | None:intergenic |
| GCCATTCCGTTGGTTGTCTC+TGG | 0.349243 | 4_1:-62690375 | None:intergenic |
| GGAATGGGAGCTTGAAGAAT+TGG | 0.358621 | 4_1:+62690433 | Msa0562690:CDS |
| AGAAAACAAAATTGTGGATC+TGG | 0.363881 | 4_1:-62689460 | None:intergenic |
| TCACAACAATGAATGAAATT+GGG | 0.365390 | 4_1:-62689251 | None:intergenic |
| AAAGCGATTGCAGAGGAAAC+TGG | 0.376465 | 4_1:-62689349 | None:intergenic |
| CATTGGCTCGCCGCAGGAAT+GGG | 0.380492 | 4_1:+62690418 | Msa0562690:CDS |
| AGACTTGGCAGCTTAGGGTT+CGG | 0.393808 | 4_1:-62689107 | None:intergenic |
| TTCTCGCATCCTTAGCGCTC+TGG | 0.400064 | 4_1:-62689603 | None:intergenic |
| GAGGGAAGGCTTCCTATCTT+AGG | 0.406399 | 4_1:+62689739 | Msa0562690:CDS |
| GAGAGAGACTTGGCAGCTTA+GGG | 0.410520 | 4_1:-62689112 | None:intergenic |
| CATGAAATCGGAATCGCTTA+GGG | 0.411941 | 4_1:-62689284 | None:intergenic |
| GTAGTACCAACCTTGTTTGC+AGG | 0.418312 | 4_1:-62689383 | None:intergenic |
| GCATTGGCTCGCCGCAGGAA+TGG | 0.419805 | 4_1:+62690417 | Msa0562690:CDS |
| ATTTCATTCATTGTTGTGAA+TGG | 0.429725 | 4_1:+62689255 | Msa0562690:five_prime_UTR |
| GCATGAAATCGGAATCGCTT+AGG | 0.431676 | 4_1:-62689285 | None:intergenic |
| AAGGGAGAAGCGCATGAAAT+CGG | 0.432309 | 4_1:-62689296 | None:intergenic |
| GTTCACAAAGAGTAATCTCT+TGG | 0.437973 | 4_1:-62690697 | None:intergenic |
| ATCCGCATTGGCCATTCCGT+TGG | 0.457689 | 4_1:-62690385 | None:intergenic |
| GTAACATCCTTTCCTAAGAT+AGG | 0.464705 | 4_1:-62689751 | None:intergenic |
| CGGTCGCATTGGCTCGCCGC+AGG | 0.490804 | 4_1:+62690412 | Msa0562690:CDS |
| TGAAATAAAATTTGAAGTTG+TGG | 0.504169 | 4_1:+62690736 | Msa0562690:three_prime_UTR |
| CTGAGTCCACTGGACACCAT+TGG | 0.504639 | 4_1:+62690312 | Msa0562690:CDS |
| GAATTGAATTGAATTGTTCA+GGG | 0.506123 | 4_1:-62689424 | None:intergenic |
| AGCTCCTCCGTGTGATCCAA+TGG | 0.509536 | 4_1:-62690328 | None:intergenic |
| TGCGGATGGAGCGGTCGCAT+TGG | 0.509786 | 4_1:+62690401 | Msa0562690:CDS |
| ACTTGGCAGCTTAGGGTTCG+GGG | 0.512087 | 4_1:-62689105 | None:intergenic |
| AGGGGTCGACGCCGAGGCAG+CGG | 0.515092 | 4_1:-62689405 | None:intergenic |
| GCTTTCGCTTCCTGCAAACA+AGG | 0.520829 | 4_1:+62689373 | Msa0562690:five_prime_UTR |
| CACAACAATGAATGAAATTG+GGG | 0.526160 | 4_1:-62689250 | None:intergenic |
| TCGCTTCCTGCAAACAAGGT+TGG | 0.531724 | 4_1:+62689377 | Msa0562690:five_prime_UTR |
| TGTCAACACGTTGGATCTGA+TGG | 0.540465 | 4_1:+62689790 | Msa0562690:CDS |
| TGCGACCGCTCCATCCGCAT+TGG | 0.541505 | 4_1:-62690397 | None:intergenic |
| AACGGAATGGCCAATGCGGA+TGG | 0.542673 | 4_1:+62690387 | Msa0562690:CDS |
| GGTTTGGTTTGGTTTGTGAG+AGG | 0.547906 | 4_1:-62689171 | None:intergenic |
| AAAATTGTGGATCTGGTTTG+GGG | 0.559473 | 4_1:-62689453 | None:intergenic |
| AAGCCTTCCCTCACGAGCAT+AGG | 0.565308 | 4_1:-62689728 | None:intergenic |
| AAGAAAAGAAAACAAAATTG+TGG | 0.568371 | 4_1:-62689466 | None:intergenic |
| TCGCTAACCACAAATCGAAT+CGG | 0.569838 | 4_1:-62689664 | None:intergenic |
| AATGAAATTGGGGATTATTG+TGG | 0.575237 | 4_1:-62689240 | None:intergenic |
| GGTTGGTACTACCGCTGCCT+CGG | 0.576849 | 4_1:+62689394 | Msa0562690:five_prime_UTR |
| GCCAGAGACAACCAACGGAA+TGG | 0.577142 | 4_1:+62690374 | Msa0562690:CDS |
| AATCCTATGCTCGTGAGGGA+AGG | 0.582749 | 4_1:+62689725 | Msa0562690:CDS |
| AATTGAATTGAATTGTTCAG+GGG | 0.584878 | 4_1:-62689423 | None:intergenic |
| CTGGACACCATTGGATCACA+CGG | 0.585651 | 4_1:+62690321 | Msa0562690:CDS |
| GAAAATTTGAACAATACGCA+AGG | 0.589020 | 4_1:-62689512 | None:intergenic |
| ATCTATATATGTTGAAACGA+GGG | 0.592726 | 4_1:-62690812 | None:intergenic |
| TGTCAATAACTGTGGCAACA+AGG | 0.599949 | 4_1:-62689693 | None:intergenic |
| CTCAAATCCTATGCTCGTGA+GGG | 0.605690 | 4_1:+62689721 | Msa0562690:CDS |
| TCTCAAATCCTATGCTCGTG+AGG | 0.606550 | 4_1:+62689720 | Msa0562690:CDS |
| GCTCTTTACTGTCAACACGT+TGG | 0.610089 | 4_1:+62689781 | Msa0562690:CDS |
| GAAGAAGAACCAGAGCGCTA+AGG | 0.610725 | 4_1:+62689594 | Msa0562690:CDS |
| ACATAAACTGAATTTAAATG+TGG | 0.612068 | 4_1:-62690599 | None:intergenic |
| AAGGCTTCCTATCTTAGGAA+AGG | 0.612471 | 4_1:+62689744 | Msa0562690:CDS |
| ATTCGATTTGTGGTTAGCGA+GGG | 0.615327 | 4_1:+62689667 | Msa0562690:CDS |
| CTTGGCAGCTTAGGGTTCGG+GGG | 0.617465 | 4_1:-62689104 | None:intergenic |
| TTGTTCAGGGGTCGACGCCG+AGG | 0.618773 | 4_1:-62689411 | None:intergenic |
| GATTCGATTTGTGGTTAGCG+AGG | 0.620699 | 4_1:+62689666 | Msa0562690:CDS |
| AATGGCCAATGCGGATGGAG+CGG | 0.628022 | 4_1:+62690392 | Msa0562690:CDS |
| AACCAACGGAATGGCCAATG+CGG | 0.659288 | 4_1:+62690383 | Msa0562690:CDS |
| GAGAGCAGTGTCAATAACTG+TGG | 0.666887 | 4_1:-62689701 | None:intergenic |
| AAATTGTGGATCTGGTTTGG+GGG | 0.667040 | 4_1:-62689452 | None:intergenic |
| TGTGATCCAATGGTGTCCAG+TGG | 0.669646 | 4_1:-62690318 | None:intergenic |
| GAAAGCAAAAGCGATTGCAG+AGG | 0.674182 | 4_1:-62689356 | None:intergenic |
| AATCTATATATGTTGAAACG+AGG | 0.692496 | 4_1:-62690813 | None:intergenic |
| TCTTCAAGCTCCCATTCCTG+CGG | 0.695043 | 4_1:-62690428 | None:intergenic |
| AAGAAGCCAGAGACAACCAA+CGG | 0.709491 | 4_1:+62690369 | Msa0562690:CDS |
| GACACCATTGGATCACACGG+AGG | 0.754267 | 4_1:+62690324 | Msa0562690:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGAAAATATATTTATGTTT+AGG | + | chr4_1:62690155-62690174 | Msa0562690:intron | 10.0% |
| !! | TTGAAAATATATTTATGTTT+AGG | + | chr4_1:62690155-62690174 | Msa0562690:intron | 10.0% |
| !!! | TTTTCTTTTCTTTTTCAATT+TGG | + | chr4_1:62689477-62689496 | Msa0562690:five_prime_UTR | 15.0% |
| !! | AAAATATATTTATGTTTAGG+AGG | + | chr4_1:62690158-62690177 | Msa0562690:intron | 15.0% |
| !! | TTACATTATGATGTTAAATT+GGG | + | chr4_1:62690220-62690239 | Msa0562690:intron | 15.0% |
| !!! | TTTTCTTTTCTTTTTCAATT+TGG | + | chr4_1:62689477-62689496 | Msa0562690:five_prime_UTR | 15.0% |
| !! | AAAATATATTTATGTTTAGG+AGG | + | chr4_1:62690158-62690177 | Msa0562690:intron | 15.0% |
| !! | TTACATTATGATGTTAAATT+GGG | + | chr4_1:62690220-62690239 | Msa0562690:intron | 15.0% |
| !! | AGAGATGAAGAAAAAAATAA+GGG | - | chr4_1:62689195-62689214 | None:intergenic | 20.0% |
| !! | AAGAAAAGAAAACAAAATTG+TGG | - | chr4_1:62689469-62689488 | None:intergenic | 20.0% |
| !!! | TTCAAACCTATTTTTAGTAA+TGG | + | chr4_1:62690118-62690137 | Msa0562690:intron | 20.0% |
| !! | CTAATACCATTACTAAAAAT+AGG | - | chr4_1:62690127-62690146 | None:intergenic | 20.0% |
| !! | CTTACATTATGATGTTAAAT+TGG | + | chr4_1:62690219-62690238 | Msa0562690:intron | 20.0% |
| !! | ACATAAACTGAATTTAAATG+TGG | - | chr4_1:62690602-62690621 | None:intergenic | 20.0% |
| !!! | TGAAATAAAATTTGAAGTTG+TGG | + | chr4_1:62690736-62690755 | Msa0562690:three_prime_UTR | 20.0% |
| !! | AGAGATGAAGAAAAAAATAA+GGG | - | chr4_1:62689195-62689214 | None:intergenic | 20.0% |
| !! | AAGAAAAGAAAACAAAATTG+TGG | - | chr4_1:62689469-62689488 | None:intergenic | 20.0% |
| !!! | TTCAAACCTATTTTTAGTAA+TGG | + | chr4_1:62690118-62690137 | Msa0562690:intron | 20.0% |
| !! | CTAATACCATTACTAAAAAT+AGG | - | chr4_1:62690127-62690146 | None:intergenic | 20.0% |
| !! | CTTACATTATGATGTTAAAT+TGG | + | chr4_1:62690219-62690238 | Msa0562690:intron | 20.0% |
| !! | ACATAAACTGAATTTAAATG+TGG | - | chr4_1:62690602-62690621 | None:intergenic | 20.0% |
| !!! | TGAAATAAAATTTGAAGTTG+TGG | + | chr4_1:62690736-62690755 | Msa0562690:three_prime_UTR | 20.0% |
| !! | AAAAAAATAAGGGTTTGGTT+TGG | - | chr4_1:62689185-62689204 | None:intergenic | 25.0% |
| ! | TGAAGAAAAAAATAAGGGTT+TGG | - | chr4_1:62689190-62689209 | None:intergenic | 25.0% |
| ! | GAGAGATGAAGAAAAAAATA+AGG | - | chr4_1:62689196-62689215 | None:intergenic | 25.0% |
| ! | TCACAACAATGAATGAAATT+GGG | - | chr4_1:62689254-62689273 | None:intergenic | 25.0% |
| ! | TTCACAACAATGAATGAAAT+TGG | - | chr4_1:62689255-62689274 | None:intergenic | 25.0% |
| ! | ATTTCATTCATTGTTGTGAA+TGG | + | chr4_1:62689255-62689274 | Msa0562690:five_prime_UTR | 25.0% |
| ! | AATTGAATTGAATTGTTCAG+GGG | - | chr4_1:62689426-62689445 | None:intergenic | 25.0% |
| ! | GAATTGAATTGAATTGTTCA+GGG | - | chr4_1:62689427-62689446 | None:intergenic | 25.0% |
| ! | TGAATTGAATTGAATTGTTC+AGG | - | chr4_1:62689428-62689447 | None:intergenic | 25.0% |
| !! | TTGATCAACATCAATGTTTT+GGG | + | chr4_1:62689631-62689650 | Msa0562690:CDS | 25.0% |
| ! | ATAATATTGCAACCTCAATT+AGG | + | chr4_1:62689919-62689938 | Msa0562690:intron | 25.0% |
| ! | AAAAATAGGTTTGAATTCAG+TGG | - | chr4_1:62690113-62690132 | None:intergenic | 25.0% |
| ! | ATTATGATGTTAAATTGGGT+TGG | + | chr4_1:62690224-62690243 | Msa0562690:intron | 25.0% |
| ! | TAATCAAAACTTTGCACAAA+AGG | - | chr4_1:62690264-62690283 | None:intergenic | 25.0% |
| !!! | GATTAGTGTCTTTTATTTTG+TGG | + | chr4_1:62690279-62690298 | Msa0562690:intron | 25.0% |
| ! | ATCTATATATGTTGAAACGA+GGG | - | chr4_1:62690815-62690834 | None:intergenic | 25.0% |
| ! | AATCTATATATGTTGAAACG+AGG | - | chr4_1:62690816-62690835 | None:intergenic | 25.0% |
| !! | AAAAAAATAAGGGTTTGGTT+TGG | - | chr4_1:62689185-62689204 | None:intergenic | 25.0% |
| ! | TGAAGAAAAAAATAAGGGTT+TGG | - | chr4_1:62689190-62689209 | None:intergenic | 25.0% |
| ! | GAGAGATGAAGAAAAAAATA+AGG | - | chr4_1:62689196-62689215 | None:intergenic | 25.0% |
| ! | TCACAACAATGAATGAAATT+GGG | - | chr4_1:62689254-62689273 | None:intergenic | 25.0% |
| ! | TTCACAACAATGAATGAAAT+TGG | - | chr4_1:62689255-62689274 | None:intergenic | 25.0% |
| ! | ATTTCATTCATTGTTGTGAA+TGG | + | chr4_1:62689255-62689274 | Msa0562690:five_prime_UTR | 25.0% |
| ! | AATTGAATTGAATTGTTCAG+GGG | - | chr4_1:62689426-62689445 | None:intergenic | 25.0% |
| ! | GAATTGAATTGAATTGTTCA+GGG | - | chr4_1:62689427-62689446 | None:intergenic | 25.0% |
| ! | TGAATTGAATTGAATTGTTC+AGG | - | chr4_1:62689428-62689447 | None:intergenic | 25.0% |
| !! | TTGATCAACATCAATGTTTT+GGG | + | chr4_1:62689631-62689650 | Msa0562690:CDS | 25.0% |
| ! | ATAATATTGCAACCTCAATT+AGG | + | chr4_1:62689919-62689938 | Msa0562690:intron | 25.0% |
| ! | AAAAATAGGTTTGAATTCAG+TGG | - | chr4_1:62690113-62690132 | None:intergenic | 25.0% |
| ! | ATTATGATGTTAAATTGGGT+TGG | + | chr4_1:62690224-62690243 | Msa0562690:intron | 25.0% |
| ! | TAATCAAAACTTTGCACAAA+AGG | - | chr4_1:62690264-62690283 | None:intergenic | 25.0% |
| !!! | GATTAGTGTCTTTTATTTTG+TGG | + | chr4_1:62690279-62690298 | Msa0562690:intron | 25.0% |
| ! | ATCTATATATGTTGAAACGA+GGG | - | chr4_1:62690815-62690834 | None:intergenic | 25.0% |
| ! | AATCTATATATGTTGAAACG+AGG | - | chr4_1:62690816-62690835 | None:intergenic | 25.0% |
| AATGAAATTGGGGATTATTG+TGG | - | chr4_1:62689243-62689262 | None:intergenic | 30.0% | |
| CACAACAATGAATGAAATTG+GGG | - | chr4_1:62689253-62689272 | None:intergenic | 30.0% | |
| AGAAAACAAAATTGTGGATC+TGG | - | chr4_1:62689463-62689482 | None:intergenic | 30.0% | |
| GAAAATTTGAACAATACGCA+AGG | - | chr4_1:62689515-62689534 | None:intergenic | 30.0% | |
| ! | TGCGTATTGTTCAAATTTTC+CGG | + | chr4_1:62689515-62689534 | Msa0562690:five_prime_UTR | 30.0% |
| ! | GTTGATCAACATCAATGTTT+TGG | + | chr4_1:62689630-62689649 | Msa0562690:CDS | 30.0% |
| !! | GTTGTTTTCATTGTTGAATC+TGG | + | chr4_1:62689868-62689887 | Msa0562690:intron | 30.0% |
| AACAAAACCAAACCTAATTG+AGG | - | chr4_1:62689934-62689953 | None:intergenic | 30.0% | |
| TTCAAGAACGAAAACATCAT+GGG | - | chr4_1:62689986-62690005 | None:intergenic | 30.0% | |
| ATTCAAGAACGAAAACATCA+TGG | - | chr4_1:62689987-62690006 | None:intergenic | 30.0% | |
| ! | TGATGTTTTCGTTCTTGAAT+TGG | + | chr4_1:62689987-62690006 | Msa0562690:intron | 30.0% |
| ! | GATGTTTTCGTTCTTGAATT+GGG | + | chr4_1:62689988-62690007 | Msa0562690:intron | 30.0% |
| TTTATAATCACACTTGCCTT+TGG | + | chr4_1:62690049-62690068 | Msa0562690:intron | 30.0% | |
| ACCATAACAAACAAAACCAA+AGG | - | chr4_1:62690068-62690087 | None:intergenic | 30.0% | |
| ATTCAGTGGTAACATAACAA+TGG | - | chr4_1:62690099-62690118 | None:intergenic | 30.0% | |
| ! | TTAGGAGGAATTTCATGTTT+TGG | + | chr4_1:62690173-62690192 | Msa0562690:intron | 30.0% |
| ! | TAGGAGGAATTTCATGTTTT+GGG | + | chr4_1:62690174-62690193 | Msa0562690:intron | 30.0% |
| !! | TTCTTGGAAGATTTGCTATT+TGG | + | chr4_1:62690510-62690529 | Msa0562690:three_prime_UTR | 30.0% |
| !! | AGTACCATAATGTGTTTTTG+TGG | + | chr4_1:62690562-62690581 | Msa0562690:three_prime_UTR | 30.0% |
| GTTACCACAAAAACACATTA+TGG | - | chr4_1:62690569-62690588 | None:intergenic | 30.0% | |
| AATGAAATTGGGGATTATTG+TGG | - | chr4_1:62689243-62689262 | None:intergenic | 30.0% | |
| CACAACAATGAATGAAATTG+GGG | - | chr4_1:62689253-62689272 | None:intergenic | 30.0% | |
| AGAAAACAAAATTGTGGATC+TGG | - | chr4_1:62689463-62689482 | None:intergenic | 30.0% | |
| GAAAATTTGAACAATACGCA+AGG | - | chr4_1:62689515-62689534 | None:intergenic | 30.0% | |
| ! | TGCGTATTGTTCAAATTTTC+CGG | + | chr4_1:62689515-62689534 | Msa0562690:five_prime_UTR | 30.0% |
| ! | GTTGATCAACATCAATGTTT+TGG | + | chr4_1:62689630-62689649 | Msa0562690:CDS | 30.0% |
| !! | GTTGTTTTCATTGTTGAATC+TGG | + | chr4_1:62689868-62689887 | Msa0562690:intron | 30.0% |
| AACAAAACCAAACCTAATTG+AGG | - | chr4_1:62689934-62689953 | None:intergenic | 30.0% | |
| TTCAAGAACGAAAACATCAT+GGG | - | chr4_1:62689986-62690005 | None:intergenic | 30.0% | |
| ATTCAAGAACGAAAACATCA+TGG | - | chr4_1:62689987-62690006 | None:intergenic | 30.0% | |
| ! | TGATGTTTTCGTTCTTGAAT+TGG | + | chr4_1:62689987-62690006 | Msa0562690:intron | 30.0% |
| ! | GATGTTTTCGTTCTTGAATT+GGG | + | chr4_1:62689988-62690007 | Msa0562690:intron | 30.0% |
| TTTATAATCACACTTGCCTT+TGG | + | chr4_1:62690049-62690068 | Msa0562690:intron | 30.0% | |
| ACCATAACAAACAAAACCAA+AGG | - | chr4_1:62690068-62690087 | None:intergenic | 30.0% | |
| ATTCAGTGGTAACATAACAA+TGG | - | chr4_1:62690099-62690118 | None:intergenic | 30.0% | |
| ! | TTAGGAGGAATTTCATGTTT+TGG | + | chr4_1:62690173-62690192 | Msa0562690:intron | 30.0% |
| ! | TAGGAGGAATTTCATGTTTT+GGG | + | chr4_1:62690174-62690193 | Msa0562690:intron | 30.0% |
| !! | TTCTTGGAAGATTTGCTATT+TGG | + | chr4_1:62690510-62690529 | Msa0562690:three_prime_UTR | 30.0% |
| !! | AGTACCATAATGTGTTTTTG+TGG | + | chr4_1:62690562-62690581 | Msa0562690:three_prime_UTR | 30.0% |
| GTTACCACAAAAACACATTA+TGG | - | chr4_1:62690569-62690588 | None:intergenic | 30.0% | |
| ! | CTTCTCCCTTTTCAAAACAA+GGG | + | chr4_1:62689309-62689328 | Msa0562690:five_prime_UTR | 35.0% |
| ! | AAAATTGTGGATCTGGTTTG+GGG | - | chr4_1:62689456-62689475 | None:intergenic | 35.0% |
| ! | CAAAATTGTGGATCTGGTTT+GGG | - | chr4_1:62689457-62689476 | None:intergenic | 35.0% |
| ACAAAATTGTGGATCTGGTT+TGG | - | chr4_1:62689458-62689477 | None:intergenic | 35.0% | |
| AACCAAAAAAACCTTCGATC+CGG | - | chr4_1:62689537-62689556 | None:intergenic | 35.0% | |
| GTAACATCCTTTCCTAAGAT+AGG | - | chr4_1:62689754-62689773 | None:intergenic | 35.0% | |
| ATTGCAACCTCAATTAGGTT+TGG | + | chr4_1:62689924-62689943 | Msa0562690:intron | 35.0% | |
| TGAATTGGGCAGGAAAAAAT+TGG | + | chr4_1:62690002-62690021 | Msa0562690:intron | 35.0% | |
| !!! | GCCTTTGGTTTTGTTTGTTA+TGG | + | chr4_1:62690064-62690083 | Msa0562690:intron | 35.0% |
| ! | AGGAGGAATTTCATGTTTTG+GGG | + | chr4_1:62690175-62690194 | Msa0562690:intron | 35.0% |
| CTAGAGAACTTCTTTCTTCT+TGG | + | chr4_1:62690494-62690513 | Msa0562690:exon | 35.0% | |
| GTTCACAAAGAGTAATCTCT+TGG | - | chr4_1:62690700-62690719 | None:intergenic | 35.0% | |
| ! | CTTCTCCCTTTTCAAAACAA+GGG | + | chr4_1:62689309-62689328 | Msa0562690:five_prime_UTR | 35.0% |
| ! | AAAATTGTGGATCTGGTTTG+GGG | - | chr4_1:62689456-62689475 | None:intergenic | 35.0% |
| ! | CAAAATTGTGGATCTGGTTT+GGG | - | chr4_1:62689457-62689476 | None:intergenic | 35.0% |
| ACAAAATTGTGGATCTGGTT+TGG | - | chr4_1:62689458-62689477 | None:intergenic | 35.0% | |
| AACCAAAAAAACCTTCGATC+CGG | - | chr4_1:62689537-62689556 | None:intergenic | 35.0% | |
| GTAACATCCTTTCCTAAGAT+AGG | - | chr4_1:62689754-62689773 | None:intergenic | 35.0% | |
| ATTGCAACCTCAATTAGGTT+TGG | + | chr4_1:62689924-62689943 | Msa0562690:intron | 35.0% | |
| TGAATTGGGCAGGAAAAAAT+TGG | + | chr4_1:62690002-62690021 | Msa0562690:intron | 35.0% | |
| !!! | GCCTTTGGTTTTGTTTGTTA+TGG | + | chr4_1:62690064-62690083 | Msa0562690:intron | 35.0% |
| ! | AGGAGGAATTTCATGTTTTG+GGG | + | chr4_1:62690175-62690194 | Msa0562690:intron | 35.0% |
| CTAGAGAACTTCTTTCTTCT+TGG | + | chr4_1:62690494-62690513 | Msa0562690:exon | 35.0% | |
| GTTCACAAAGAGTAATCTCT+TGG | - | chr4_1:62690700-62690719 | None:intergenic | 35.0% | |
| ! | TTTCTTTTTCTCTCTCGCAG+TGG | + | chr4_1:62689217-62689236 | Msa0562690:five_prime_UTR | 40.0% |
| CATGAAATCGGAATCGCTTA+GGG | - | chr4_1:62689287-62689306 | None:intergenic | 40.0% | |
| ! | GCTTCTCCCTTTTCAAAACA+AGG | + | chr4_1:62689308-62689327 | Msa0562690:five_prime_UTR | 40.0% |
| !! | AAATTGTGGATCTGGTTTGG+GGG | - | chr4_1:62689455-62689474 | None:intergenic | 40.0% |
| ! | GTTCAAATTTTCCGGATCGA+AGG | + | chr4_1:62689523-62689542 | Msa0562690:five_prime_UTR | 40.0% |
| !!! | TTCCGGATCGAAGGTTTTTT+TGG | + | chr4_1:62689532-62689551 | Msa0562690:five_prime_UTR | 40.0% |
| TCGCTAACCACAAATCGAAT+CGG | - | chr4_1:62689667-62689686 | None:intergenic | 40.0% | |
| ! | ATTCGATTTGTGGTTAGCGA+GGG | + | chr4_1:62689667-62689686 | Msa0562690:CDS | 40.0% |
| TGTCAATAACTGTGGCAACA+AGG | - | chr4_1:62689696-62689715 | None:intergenic | 40.0% | |
| AAGGCTTCCTATCTTAGGAA+AGG | + | chr4_1:62689744-62689763 | Msa0562690:CDS | 40.0% | |
| ! | TTTTCGTTCTTGAATTGGGC+AGG | + | chr4_1:62689992-62690011 | Msa0562690:intron | 40.0% |
| ! | TTTCTTTTTCTCTCTCGCAG+TGG | + | chr4_1:62689217-62689236 | Msa0562690:five_prime_UTR | 40.0% |
| CATGAAATCGGAATCGCTTA+GGG | - | chr4_1:62689287-62689306 | None:intergenic | 40.0% | |
| ! | GCTTCTCCCTTTTCAAAACA+AGG | + | chr4_1:62689308-62689327 | Msa0562690:five_prime_UTR | 40.0% |
| !! | AAATTGTGGATCTGGTTTGG+GGG | - | chr4_1:62689455-62689474 | None:intergenic | 40.0% |
| ! | GTTCAAATTTTCCGGATCGA+AGG | + | chr4_1:62689523-62689542 | Msa0562690:five_prime_UTR | 40.0% |
| !!! | TTCCGGATCGAAGGTTTTTT+TGG | + | chr4_1:62689532-62689551 | Msa0562690:five_prime_UTR | 40.0% |
| TCGCTAACCACAAATCGAAT+CGG | - | chr4_1:62689667-62689686 | None:intergenic | 40.0% | |
| ! | ATTCGATTTGTGGTTAGCGA+GGG | + | chr4_1:62689667-62689686 | Msa0562690:CDS | 40.0% |
| TGTCAATAACTGTGGCAACA+AGG | - | chr4_1:62689696-62689715 | None:intergenic | 40.0% | |
| AAGGCTTCCTATCTTAGGAA+AGG | + | chr4_1:62689744-62689763 | Msa0562690:CDS | 40.0% | |
| ! | TTTTCGTTCTTGAATTGGGC+AGG | + | chr4_1:62689992-62690011 | Msa0562690:intron | 40.0% |
| TATAGCGAGAGAGAGAGACT+TGG | - | chr4_1:62689125-62689144 | None:intergenic | 45.0% | |
| !! | GGTTTGGTTTGGTTTGTGAG+AGG | - | chr4_1:62689174-62689193 | None:intergenic | 45.0% |
| GCATGAAATCGGAATCGCTT+AGG | - | chr4_1:62689288-62689307 | None:intergenic | 45.0% | |
| ! | AAGGGAGAAGCGCATGAAAT+CGG | - | chr4_1:62689299-62689318 | None:intergenic | 45.0% |
| !!! | GCTCGCCCTTGTTTTGAAAA+GGG | - | chr4_1:62689317-62689336 | None:intergenic | 45.0% |
| AAAGCGATTGCAGAGGAAAC+TGG | - | chr4_1:62689352-62689371 | None:intergenic | 45.0% | |
| GAAAGCAAAAGCGATTGCAG+AGG | - | chr4_1:62689359-62689378 | None:intergenic | 45.0% | |
| ! | GTAGTACCAACCTTGTTTGC+AGG | - | chr4_1:62689386-62689405 | None:intergenic | 45.0% |
| !!! | ATCAATGTTTTGGGAAGCGC+TGG | + | chr4_1:62689640-62689659 | Msa0562690:CDS | 45.0% |
| ! | GATTCGATTTGTGGTTAGCG+AGG | + | chr4_1:62689666-62689685 | Msa0562690:CDS | 45.0% |
| GAGAGCAGTGTCAATAACTG+TGG | - | chr4_1:62689704-62689723 | None:intergenic | 45.0% | |
| TCTCAAATCCTATGCTCGTG+AGG | + | chr4_1:62689720-62689739 | Msa0562690:CDS | 45.0% | |
| CTCAAATCCTATGCTCGTGA+GGG | + | chr4_1:62689721-62689740 | Msa0562690:CDS | 45.0% | |
| GCTCTTTACTGTCAACACGT+TGG | + | chr4_1:62689781-62689800 | Msa0562690:CDS | 45.0% | |
| TGTCAACACGTTGGATCTGA+TGG | + | chr4_1:62689790-62689809 | Msa0562690:CDS | 45.0% | |
| AAGAAGCCAGAGACAACCAA+CGG | + | chr4_1:62690369-62690388 | Msa0562690:CDS | 45.0% | |
| GGAATGGGAGCTTGAAGAAT+TGG | + | chr4_1:62690433-62690452 | Msa0562690:CDS | 45.0% | |
| TATAGCGAGAGAGAGAGACT+TGG | - | chr4_1:62689125-62689144 | None:intergenic | 45.0% | |
| !! | GGTTTGGTTTGGTTTGTGAG+AGG | - | chr4_1:62689174-62689193 | None:intergenic | 45.0% |
| GCATGAAATCGGAATCGCTT+AGG | - | chr4_1:62689288-62689307 | None:intergenic | 45.0% | |
| ! | AAGGGAGAAGCGCATGAAAT+CGG | - | chr4_1:62689299-62689318 | None:intergenic | 45.0% |
| !!! | GCTCGCCCTTGTTTTGAAAA+GGG | - | chr4_1:62689317-62689336 | None:intergenic | 45.0% |
| AAAGCGATTGCAGAGGAAAC+TGG | - | chr4_1:62689352-62689371 | None:intergenic | 45.0% | |
| GAAAGCAAAAGCGATTGCAG+AGG | - | chr4_1:62689359-62689378 | None:intergenic | 45.0% | |
| ! | GTAGTACCAACCTTGTTTGC+AGG | - | chr4_1:62689386-62689405 | None:intergenic | 45.0% |
| !!! | ATCAATGTTTTGGGAAGCGC+TGG | + | chr4_1:62689640-62689659 | Msa0562690:CDS | 45.0% |
| ! | GATTCGATTTGTGGTTAGCG+AGG | + | chr4_1:62689666-62689685 | Msa0562690:CDS | 45.0% |
| GAGAGCAGTGTCAATAACTG+TGG | - | chr4_1:62689704-62689723 | None:intergenic | 45.0% | |
| TCTCAAATCCTATGCTCGTG+AGG | + | chr4_1:62689720-62689739 | Msa0562690:CDS | 45.0% | |
| CTCAAATCCTATGCTCGTGA+GGG | + | chr4_1:62689721-62689740 | Msa0562690:CDS | 45.0% | |
| GCTCTTTACTGTCAACACGT+TGG | + | chr4_1:62689781-62689800 | Msa0562690:CDS | 45.0% | |
| TGTCAACACGTTGGATCTGA+TGG | + | chr4_1:62689790-62689809 | Msa0562690:CDS | 45.0% | |
| AAGAAGCCAGAGACAACCAA+CGG | + | chr4_1:62690369-62690388 | Msa0562690:CDS | 45.0% | |
| GGAATGGGAGCTTGAAGAAT+TGG | + | chr4_1:62690433-62690452 | Msa0562690:CDS | 45.0% | |
| AGACTTGGCAGCTTAGGGTT+CGG | - | chr4_1:62689110-62689129 | None:intergenic | 50.0% | |
| GAGAGAGACTTGGCAGCTTA+GGG | - | chr4_1:62689115-62689134 | None:intergenic | 50.0% | |
| AGAGAGAGACTTGGCAGCTT+AGG | - | chr4_1:62689116-62689135 | None:intergenic | 50.0% | |
| !!! | CGCTCGCCCTTGTTTTGAAA+AGG | - | chr4_1:62689318-62689337 | None:intergenic | 50.0% |
| GCTTTCGCTTCCTGCAAACA+AGG | + | chr4_1:62689373-62689392 | Msa0562690:five_prime_UTR | 50.0% | |
| TCGCTTCCTGCAAACAAGGT+TGG | + | chr4_1:62689377-62689396 | Msa0562690:five_prime_UTR | 50.0% | |
| ! | GAAGAAGAACCAGAGCGCTA+AGG | + | chr4_1:62689594-62689613 | Msa0562690:CDS | 50.0% |
| AATCCTATGCTCGTGAGGGA+AGG | + | chr4_1:62689725-62689744 | Msa0562690:CDS | 50.0% | |
| GAGGGAAGGCTTCCTATCTT+AGG | + | chr4_1:62689739-62689758 | Msa0562690:CDS | 50.0% | |
| !!! | TTTTGCAGCTCTGAGTCCAC+TGG | + | chr4_1:62690302-62690321 | Msa0562690:intron | 50.0% |
| TGTGATCCAATGGTGTCCAG+TGG | - | chr4_1:62690321-62690340 | None:intergenic | 50.0% | |
| CTGGACACCATTGGATCACA+CGG | + | chr4_1:62690321-62690340 | Msa0562690:CDS | 50.0% | |
| AACCAACGGAATGGCCAATG+CGG | + | chr4_1:62690383-62690402 | Msa0562690:CDS | 50.0% | |
| TCTTCAAGCTCCCATTCCTG+CGG | - | chr4_1:62690431-62690450 | None:intergenic | 50.0% | |
| AGACTTGGCAGCTTAGGGTT+CGG | - | chr4_1:62689110-62689129 | None:intergenic | 50.0% | |
| GAGAGAGACTTGGCAGCTTA+GGG | - | chr4_1:62689115-62689134 | None:intergenic | 50.0% | |
| AGAGAGAGACTTGGCAGCTT+AGG | - | chr4_1:62689116-62689135 | None:intergenic | 50.0% | |
| !!! | CGCTCGCCCTTGTTTTGAAA+AGG | - | chr4_1:62689318-62689337 | None:intergenic | 50.0% |
| GCTTTCGCTTCCTGCAAACA+AGG | + | chr4_1:62689373-62689392 | Msa0562690:five_prime_UTR | 50.0% | |
| TCGCTTCCTGCAAACAAGGT+TGG | + | chr4_1:62689377-62689396 | Msa0562690:five_prime_UTR | 50.0% | |
| ! | GAAGAAGAACCAGAGCGCTA+AGG | + | chr4_1:62689594-62689613 | Msa0562690:CDS | 50.0% |
| AATCCTATGCTCGTGAGGGA+AGG | + | chr4_1:62689725-62689744 | Msa0562690:CDS | 50.0% | |
| GAGGGAAGGCTTCCTATCTT+AGG | + | chr4_1:62689739-62689758 | Msa0562690:CDS | 50.0% | |
| !!! | TTTTGCAGCTCTGAGTCCAC+TGG | + | chr4_1:62690302-62690321 | Msa0562690:intron | 50.0% |
| TGTGATCCAATGGTGTCCAG+TGG | - | chr4_1:62690321-62690340 | None:intergenic | 50.0% | |
| CTGGACACCATTGGATCACA+CGG | + | chr4_1:62690321-62690340 | Msa0562690:CDS | 50.0% | |
| AACCAACGGAATGGCCAATG+CGG | + | chr4_1:62690383-62690402 | Msa0562690:CDS | 50.0% | |
| TCTTCAAGCTCCCATTCCTG+CGG | - | chr4_1:62690431-62690450 | None:intergenic | 50.0% | |
| ACTTGGCAGCTTAGGGTTCG+GGG | - | chr4_1:62689108-62689127 | None:intergenic | 55.0% | |
| GACTTGGCAGCTTAGGGTTC+GGG | - | chr4_1:62689109-62689128 | None:intergenic | 55.0% | |
| TTCTCGCATCCTTAGCGCTC+TGG | - | chr4_1:62689606-62689625 | None:intergenic | 55.0% | |
| !! | CGCTGGACCGATTCGATTTG+TGG | + | chr4_1:62689657-62689676 | Msa0562690:CDS | 55.0% |
| AAGCCTTCCCTCACGAGCAT+AGG | - | chr4_1:62689731-62689750 | None:intergenic | 55.0% | |
| CTGAGTCCACTGGACACCAT+TGG | + | chr4_1:62690312-62690331 | Msa0562690:CDS | 55.0% | |
| GACACCATTGGATCACACGG+AGG | + | chr4_1:62690324-62690343 | Msa0562690:CDS | 55.0% | |
| AGCTCCTCCGTGTGATCCAA+TGG | - | chr4_1:62690331-62690350 | None:intergenic | 55.0% | |
| GCCAGAGACAACCAACGGAA+TGG | + | chr4_1:62690374-62690393 | Msa0562690:CDS | 55.0% | |
| ! | GCCATTCCGTTGGTTGTCTC+TGG | - | chr4_1:62690378-62690397 | None:intergenic | 55.0% |
| ! | ATCCGCATTGGCCATTCCGT+TGG | - | chr4_1:62690388-62690407 | None:intergenic | 55.0% |
| AACGGAATGGCCAATGCGGA+TGG | + | chr4_1:62690387-62690406 | Msa0562690:CDS | 55.0% | |
| AATGGCCAATGCGGATGGAG+CGG | + | chr4_1:62690392-62690411 | Msa0562690:CDS | 55.0% | |
| ACTTGGCAGCTTAGGGTTCG+GGG | - | chr4_1:62689108-62689127 | None:intergenic | 55.0% | |
| GACTTGGCAGCTTAGGGTTC+GGG | - | chr4_1:62689109-62689128 | None:intergenic | 55.0% | |
| TTCTCGCATCCTTAGCGCTC+TGG | - | chr4_1:62689606-62689625 | None:intergenic | 55.0% | |
| !! | CGCTGGACCGATTCGATTTG+TGG | + | chr4_1:62689657-62689676 | Msa0562690:CDS | 55.0% |
| AAGCCTTCCCTCACGAGCAT+AGG | - | chr4_1:62689731-62689750 | None:intergenic | 55.0% | |
| CTGAGTCCACTGGACACCAT+TGG | + | chr4_1:62690312-62690331 | Msa0562690:CDS | 55.0% | |
| GACACCATTGGATCACACGG+AGG | + | chr4_1:62690324-62690343 | Msa0562690:CDS | 55.0% | |
| AGCTCCTCCGTGTGATCCAA+TGG | - | chr4_1:62690331-62690350 | None:intergenic | 55.0% | |
| GCCAGAGACAACCAACGGAA+TGG | + | chr4_1:62690374-62690393 | Msa0562690:CDS | 55.0% | |
| ! | GCCATTCCGTTGGTTGTCTC+TGG | - | chr4_1:62690378-62690397 | None:intergenic | 55.0% |
| ! | ATCCGCATTGGCCATTCCGT+TGG | - | chr4_1:62690388-62690407 | None:intergenic | 55.0% |
| AACGGAATGGCCAATGCGGA+TGG | + | chr4_1:62690387-62690406 | Msa0562690:CDS | 55.0% | |
| AATGGCCAATGCGGATGGAG+CGG | + | chr4_1:62690392-62690411 | Msa0562690:CDS | 55.0% | |
| ! | GGTTGGTACTACCGCTGCCT+CGG | + | chr4_1:62689394-62689413 | Msa0562690:five_prime_UTR | 60.0% |
| !! | CATTGGCTCGCCGCAGGAAT+GGG | + | chr4_1:62690418-62690437 | Msa0562690:CDS | 60.0% |
| ! | GGTTGGTACTACCGCTGCCT+CGG | + | chr4_1:62689394-62689413 | Msa0562690:five_prime_UTR | 60.0% |
| !! | CATTGGCTCGCCGCAGGAAT+GGG | + | chr4_1:62690418-62690437 | Msa0562690:CDS | 60.0% |
| TTGTTCAGGGGTCGACGCCG+AGG | - | chr4_1:62689414-62689433 | None:intergenic | 65.0% | |
| TGCGACCGCTCCATCCGCAT+TGG | - | chr4_1:62690400-62690419 | None:intergenic | 65.0% | |
| TGCGGATGGAGCGGTCGCAT+TGG | + | chr4_1:62690401-62690420 | Msa0562690:CDS | 65.0% | |
| !! | GCATTGGCTCGCCGCAGGAA+TGG | + | chr4_1:62690417-62690436 | Msa0562690:CDS | 65.0% |
| TTGTTCAGGGGTCGACGCCG+AGG | - | chr4_1:62689414-62689433 | None:intergenic | 65.0% | |
| TGCGACCGCTCCATCCGCAT+TGG | - | chr4_1:62690400-62690419 | None:intergenic | 65.0% | |
| TGCGGATGGAGCGGTCGCAT+TGG | + | chr4_1:62690401-62690420 | Msa0562690:CDS | 65.0% | |
| !! | GCATTGGCTCGCCGCAGGAA+TGG | + | chr4_1:62690417-62690436 | Msa0562690:CDS | 65.0% |
| AGGGGTCGACGCCGAGGCAG+CGG | - | chr4_1:62689408-62689427 | None:intergenic | 75.0% | |
| !! | CGGTCGCATTGGCTCGCCGC+AGG | + | chr4_1:62690412-62690431 | Msa0562690:CDS | 75.0% |
| AGGGGTCGACGCCGAGGCAG+CGG | - | chr4_1:62689408-62689427 | None:intergenic | 75.0% | |
| !! | CGGTCGCATTGGCTCGCCGC+AGG | + | chr4_1:62690412-62690431 | Msa0562690:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 62689105 | 62690886 | 62689105 | ID=Msa0562690;Name=Msa0562690 |
| chr4_1 | mRNA | 62689105 | 62690886 | 62689105 | ID=Msa0562690-mRNA-1;Parent=Msa0562690;Name=Msa0562690-mRNA-1;_AED=0.01;_eAED=0.01;_QI=472|1|1|1|1|1|2|389|140 |
| chr4_1 | exon | 62689105 | 62689811 | 62689105 | ID=Msa0562690-mRNA-1:exon:19823;Parent=Msa0562690-mRNA-1 |
| chr4_1 | exon | 62690310 | 62690886 | 62690310 | ID=Msa0562690-mRNA-1:exon:19824;Parent=Msa0562690-mRNA-1 |
| chr4_1 | five_prime_UTR | 62689105 | 62689576 | 62689105 | ID=Msa0562690-mRNA-1:five_prime_utr;Parent=Msa0562690-mRNA-1 |
| chr4_1 | CDS | 62689577 | 62689811 | 62689577 | ID=Msa0562690-mRNA-1:cds;Parent=Msa0562690-mRNA-1 |
| chr4_1 | CDS | 62690310 | 62690497 | 62690310 | ID=Msa0562690-mRNA-1:cds;Parent=Msa0562690-mRNA-1 |
| chr4_1 | three_prime_UTR | 62690498 | 62690886 | 62690498 | ID=Msa0562690-mRNA-1:three_prime_utr;Parent=Msa0562690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
