AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1348230


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1348230 MtrunA17_Chr3g0122171 94.750 400 18 2 1 398 1 399 0.0 698
Msa1348230 MtrunA17_Chr8g0386481 22.616 367 201 11 101 397 534 887 1.08e-16 82.4
Msa1348230 MtrunA17_Chr2g0293821 25.000 232 148 5 51 282 127 332 1.30e-16 80.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1348230 AT3G23700.1 69.463 298 91 0 101 398 95 392 1.57e-147 424
Msa1348230 AT1G12800.1 27.778 252 162 7 154 397 527 766 4.19e-19 90.1
Msa1348230 AT5G30510.1 30.526 190 114 3 93 282 167 338 7.96e-19 88.2

Find 124 sgRNAs with CRISPR-Local

Find 469 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTGGTTTGGATTGAATTT+TGG 0.165463 tig0010244:+59681 None:intergenic
CAGCTTTCACATCTATTTAA+AGG 0.188311 tig0010244:-52908 Msa1348230:three_prime_UTR
GGTAACTTGCGAGGGCATTT+AGG 0.208511 tig0010244:+59485 None:intergenic
TCAACTCTCTTGCAAGTTCT+TGG 0.229040 tig0010244:+58250 None:intergenic
CATTTAACTAACTCGCAAAA+AGG 0.276793 tig0010244:-52842 Msa1348230:three_prime_UTR
AGAAGAAGAGGAAGAGGAAT+TGG 0.315706 tig0010244:+59664 None:intergenic
TCTCACAAGACTTGCAGCTT+TGG 0.347827 tig0010244:-53442 Msa1348230:CDS
CCACCGTCAACAACGCGAAT+TGG 0.350762 tig0010244:-59641 Msa1348230:five_prime_UTR
GTAACTTGCGAGGGCATTTA+GGG 0.363821 tig0010244:+59486 None:intergenic
ATGCTGGAGGCCTGCTGGTT+CGG 0.365464 tig0010244:-58531 Msa1348230:CDS
AAGAGGAAGAGGAATTGGTT+TGG 0.384366 tig0010244:+59669 None:intergenic
CGGGGCTCAGCTGTGGGAAC+GGG 0.388395 tig0010244:+58485 None:intergenic
TAGTTAAATGAATCACGATT+TGG 0.393801 tig0010244:+52855 None:intergenic
AACCGACTCTTGCTTCAAAA+AGG 0.402684 tig0010244:+57744 None:intergenic
TATCTGAAAAGGAAGCTTCA+TGG 0.403011 tig0010244:-57799 Msa1348230:CDS
GTCGGTTCTGTTGAGGACTA+TGG 0.403821 tig0010244:-57728 Msa1348230:CDS
GTAGTACTGCTGAAAGAATC+AGG 0.410342 tig0010244:+56183 None:intergenic
GCAGGTCTTTATCACCTTAC+CGG 0.410702 tig0010244:-57592 Msa1348230:intron
TGACCAGGAAGGCATCAAAA+AGG 0.417349 tig0010244:-53011 Msa1348230:CDS
TAAAGTAAATTGTCAATAAA+CGG 0.417990 tig0010244:+52803 None:intergenic
TTCCGTTGTTGAACTCGAAA+TGG 0.425257 tig0010244:-59618 Msa1348230:exon
CGGTGGAGAAGAAGAGGAAG+AGG 0.428260 tig0010244:+59658 None:intergenic
CATCGATCCCCTACCGGGGC+TGG 0.428894 tig0010244:-56151 Msa1348230:CDS
ATGATGCTCTTCGTCAAGCC+AGG 0.431853 tig0010244:-59328 Msa1348230:CDS
GAAGAGCTATTGCAGGAAGA+TGG 0.434626 tig0010244:-56117 Msa1348230:CDS
AGACGAGGAGAAACGGAAAT+TGG 0.435020 tig0010244:-57825 Msa1348230:CDS
CGATGCAAGAATCAGTCGTC+AGG 0.443629 tig0010244:-53483 Msa1348230:CDS
AATACTTGAAGAGCTATTGC+AGG 0.455980 tig0010244:-56124 Msa1348230:CDS
CATTTACAATGGTAGGGTTG+AGG 0.458343 tig0010244:-58560 Msa1348230:CDS
ATTTACAATGGTAGGGTTGA+GGG 0.460450 tig0010244:-58559 Msa1348230:CDS
TTTACTCTCCTTGCTCGAGC+TGG 0.461579 tig0010244:-53313 Msa1348230:CDS
AAAGGCAATACAACGAGTAT+TGG 0.467765 tig0010244:-52993 Msa1348230:CDS
TCTGCAACCCTAGGTTCCTT+CGG 0.469011 tig0010244:-59587 Msa1348230:CDS
TTTGATGCCTTCCTGGTCAA+GGG 0.470271 tig0010244:+53015 None:intergenic
AGTCGCATCGATCCCCTACC+GGG 0.473243 tig0010244:-56156 Msa1348230:CDS
TATTCAAAACATATCAACAT+AGG 0.473981 tig0010244:-57770 Msa1348230:CDS
ACGGGGCTCAGCTGTGGGAA+CGG 0.478203 tig0010244:+58484 None:intergenic
TGAAGTAGAGATCGTCAGAT+TGG 0.479506 tig0010244:-58615 Msa1348230:intron
GTCATCCCAGGCACCTCCCA+TGG 0.479573 tig0010244:-53344 Msa1348230:intron
AAATACCTTCACTGATAAGA+TGG 0.485562 tig0010244:+58221 None:intergenic
GAGCAAGGAGAGTAAACCTT+TGG 0.486180 tig0010244:+53320 None:intergenic
GAATGCACGGGGCTCAGCTG+TGG 0.486691 tig0010244:+58478 None:intergenic
ATTCAAAACATATCAACATA+GGG 0.487004 tig0010244:-57769 Msa1348230:CDS
TCATAAGAGTCGGGAGCAGA+AGG 0.487537 tig0010244:+59347 None:intergenic
GAAATTGGTCTTATCTGAAA+AGG 0.487701 tig0010244:-57810 Msa1348230:CDS
TCATCACAATTCTAAAATCA+TGG 0.491870 tig0010244:-59435 Msa1348230:CDS
GAACCAATTCGCGTTGTTGA+CGG 0.499803 tig0010244:+59638 None:intergenic
TTCTGAGATATGTATTAGTC+CGG 0.505166 tig0010244:+57573 None:intergenic
GAGAGTAAACCTTTGGTCCA+TGG 0.508023 tig0010244:+53327 None:intergenic
ATTGAAAGGATTGACGATTG+AGG 0.512516 tig0010244:+59511 None:intergenic
TATTGTATCCAGCCCCGGTA+GGG 0.514033 tig0010244:+56143 None:intergenic
AGAGTAAACCTTTGGTCCAT+GGG 0.520509 tig0010244:+53328 None:intergenic
TTGTCCAGAGTTTCTAGCAG+TGG 0.520893 tig0010244:+56715 None:intergenic
CGAAGAGCATCATAAGAGTC+GGG 0.520942 tig0010244:+59338 None:intergenic
TTATAGTAGACGAGGAGAAA+CGG 0.524178 tig0010244:-57832 Msa1348230:CDS
CCTTGCTCGAGCTGGAAGAC+AGG 0.524839 tig0010244:-53305 Msa1348230:intron
TACATATCTCAGAAGTGTCA+TGG 0.525697 tig0010244:-57564 Msa1348230:CDS
TTGACGATTGAGGAAGAAGA+AGG 0.528513 tig0010244:+59521 None:intergenic
CAGTCGCATCGATCCCCTAC+CGG 0.528605 tig0010244:-56157 Msa1348230:CDS
AAGAGCTATTGCAGGAAGAT+GGG 0.530885 tig0010244:-56116 Msa1348230:intron
GTTCATCTGCGCTTCCCTGA+CGG 0.533095 tig0010244:-57698 Msa1348230:intron
AGTGCAATCAATCAGATTCA+AGG 0.536497 tig0010244:+52962 None:intergenic
AGATCCACTGCTAGAAACTC+TGG 0.537122 tig0010244:-56719 Msa1348230:CDS
GTAAGAGACTTCTTAAGAGA+AGG 0.538732 tig0010244:-57526 Msa1348230:CDS
GTGGACTCATTTACAATGGT+AGG 0.540686 tig0010244:-58567 Msa1348230:CDS
GCTATCTTCTCTGCAACCCT+AGG 0.540971 tig0010244:-59596 Msa1348230:CDS
TGAAGCGATAGATAGAATAG+AGG 0.550543 tig0010244:+59713 None:intergenic
GTAGAGATCGTCAGATTGGA+AGG 0.553487 tig0010244:-58611 Msa1348230:intron
AGCAAGAGTCGGTTCTGTTG+AGG 0.555824 tig0010244:-57735 Msa1348230:CDS
ACATGGCACCGAAGGAACCT+AGG 0.560207 tig0010244:+59579 None:intergenic
ATACCTTGACATGAATGCAC+GGG 0.560834 tig0010244:+58466 None:intergenic
AATGCACGGGGCTCAGCTGT+GGG 0.560934 tig0010244:+58479 None:intergenic
TCTTGTGATTATTATTGAGA+GGG 0.562540 tig0010244:+52938 None:intergenic
CAAGGTGGTGGTAACTTGCG+AGG 0.565879 tig0010244:+59476 None:intergenic
ACGAAGAGCATCATAAGAGT+CGG 0.568186 tig0010244:+59337 None:intergenic
TAAGAGAAGGTGAAGAAGTG+AGG 0.569636 tig0010244:-57513 Msa1348230:CDS
AAGAGAAGGTGAAGAAGTGA+GGG 0.569971 tig0010244:-57512 Msa1348230:CDS
ACATATCTCAGAAGTGTCAT+GGG 0.570829 tig0010244:-57563 Msa1348230:CDS
TGGACTCATTTACAATGGTA+GGG 0.572453 tig0010244:-58566 Msa1348230:CDS
AGATATGTATTAGTCCGGTA+AGG 0.575895 tig0010244:+57578 None:intergenic
GGGCATTTAGGGAAATTGAA+AGG 0.576571 tig0010244:+59497 None:intergenic
ATCTTGTGATTATTATTGAG+AGG 0.577327 tig0010244:+52937 None:intergenic
TAGAGTAAAACCGAACCAGC+AGG 0.577882 tig0010244:+58521 None:intergenic
ATTGTATCCAGCCCCGGTAG+GGG 0.577961 tig0010244:+56144 None:intergenic
CCTGTCTTCCAGCTCGAGCA+AGG 0.580250 tig0010244:+53305 None:intergenic
GTATTGTATCCAGCCCCGGT+AGG 0.580697 tig0010244:+56142 None:intergenic
TAGTGCCACTGGCAAGGTGG+TGG 0.581006 tig0010244:+59464 None:intergenic
CGGTTCCATCTTATCAGTGA+AGG 0.581265 tig0010244:-58226 Msa1348230:intron
TCAAGTATTGTATCCAGCCC+CGG 0.586539 tig0010244:+56138 None:intergenic
AGGCACCTCCCATGGACCAA+AGG 0.593592 tig0010244:-53336 Msa1348230:CDS
TGTTGACGGTGGAGAAGAAG+AGG 0.594518 tig0010244:+59652 None:intergenic
TCTGGACAAAGTAATACCTC+AGG 0.594718 tig0010244:-56701 Msa1348230:intron
GAGGAAGGACATGGCACCGA+AGG 0.595181 tig0010244:+59571 None:intergenic
TGATTGTGAAGATGAGAGGA+AGG 0.601524 tig0010244:+59556 None:intergenic
GTTGTGATTGTGAAGATGAG+AGG 0.605556 tig0010244:+59552 None:intergenic
AGCCCCGTGCATTCATGTCA+AGG 0.606788 tig0010244:-58469 Msa1348230:intron
TCTGAAAACATCCCTTGACC+AGG 0.610102 tig0010244:-53026 Msa1348230:CDS
CATGGCACCGAAGGAACCTA+GGG 0.612699 tig0010244:+59580 None:intergenic
TGATGCTCTTCGTCAAGCCA+GGG 0.615488 tig0010244:-59327 Msa1348230:intron
GATGCAAGAATCAGTCGTCA+GGG 0.617292 tig0010244:-53482 Msa1348230:CDS
CCAATTCGCGTTGTTGACGG+TGG 0.619513 tig0010244:+59641 None:intergenic
GAACTTGCAAGAGAGTTGAT+CGG 0.625345 tig0010244:-58246 Msa1348230:CDS
TGACGATTGAGGAAGAAGAA+GGG 0.626651 tig0010244:+59522 None:intergenic
TTGCATAGTAGTTACCGTCA+GGG 0.635380 tig0010244:+57684 None:intergenic
CATAAGAGTCGGGAGCAGAA+GGG 0.637374 tig0010244:+59348 None:intergenic
GATACCTTGACATGAATGCA+CGG 0.637484 tig0010244:+58465 None:intergenic
AAAACATCCCTTGACCAGGA+AGG 0.640351 tig0010244:-53022 Msa1348230:CDS
GATGATGACGATAGTGCCAC+TGG 0.643763 tig0010244:+59453 None:intergenic
AAGGTGGTGGTAACTTGCGA+GGG 0.646784 tig0010244:+59477 None:intergenic
GTGATCCATCCAGGTTCAGG+AGG 0.647122 tig0010244:-53053 Msa1348230:intron
GACAGTGGACTCATTTACAA+TGG 0.649720 tig0010244:-58571 Msa1348230:CDS
AGCCATTTCGAGTTCAACAA+CGG 0.657550 tig0010244:+59616 None:intergenic
TGAAGATGAGAGGAAGGACA+TGG 0.660623 tig0010244:+59562 None:intergenic
TTCAAAACATATCAACATAG+GGG 0.663132 tig0010244:-57768 Msa1348230:CDS
AGTTACCACCACCTTGCCAG+TGG 0.668620 tig0010244:-59469 Msa1348230:CDS
TGACGATAGTGCCACTGGCA+AGG 0.670149 tig0010244:+59458 None:intergenic
GTAAACCTTTGGTCCATGGG+AGG 0.670349 tig0010244:+53331 None:intergenic
GTCGCATCGATCCCCTACCG+GGG 0.679917 tig0010244:-56155 Msa1348230:CDS
ATGCAAGAATCAGTCGTCAG+GGG 0.684889 tig0010244:-53481 Msa1348230:CDS
CATATTGATGAATTCGACAG+TGG 0.686608 tig0010244:-59383 Msa1348230:CDS
GCAAACGCATATAGAGACAG+TGG 0.691753 tig0010244:-58586 Msa1348230:CDS
TTAGGTAATTATAGTAGACG+AGG 0.708605 tig0010244:-57840 Msa1348230:intron
TACCTTGACATGAATGCACG+GGG 0.710872 tig0010244:+58467 None:intergenic
CGATAGTGCCACTGGCAAGG+TGG 0.751025 tig0010244:+59461 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTTATTAAAAAAAAA+TGG - tig0010244:59079-59098 Msa1348230:intron 0.0%
!!! CAACTTATATTTAAAATTTA+TGG - tig0010244:53405-53424 Msa1348230:intron 10.0%
!! TTAAAGAAAAAATAATACTT+TGG + tig0010244:55290-55309 None:intergenic 10.0%
!!! TATAATTTATAAGCATATTT+TGG + tig0010244:56089-56108 None:intergenic 10.0%
!! TATGCTTATAAATTATAATT+AGG - tig0010244:56092-56111 Msa1348230:intron 10.0%
!! ATGCTTATAAATTATAATTA+GGG - tig0010244:56093-56112 Msa1348230:intron 10.0%
!! TTAAAAAAACAAGATTAAAT+AGG + tig0010244:56782-56801 None:intergenic 10.0%
!! ACATATACTTTATATTATTA+TGG + tig0010244:58934-58953 None:intergenic 10.0%
!! AGATATTCATAAATAAAAAA+AGG + tig0010244:59361-59380 None:intergenic 10.0%
!! ATAAAAAATAGTATAGACTT+GGG - tig0010244:53206-53225 Msa1348230:intron 15.0%
!! TTCAATTTAATCATAATAGT+AGG - tig0010244:54131-54150 Msa1348230:intron 15.0%
!! TGTCTTAAATTTATAAATGA+CGG - tig0010244:54591-54610 Msa1348230:intron 15.0%
!! TGTATATAGTATTAATTGAA+GGG + tig0010244:55261-55280 None:intergenic 15.0%
!! AAAAAAATCAAAATGTATGT+TGG + tig0010244:55670-55689 None:intergenic 15.0%
!! TTCACATATATTAAGAAAAA+TGG - tig0010244:55856-55875 Msa1348230:intron 15.0%
!! TGCATATATAAATTCTAAAT+AGG + tig0010244:56126-56145 None:intergenic 15.0%
!! AATTTATATATGCATGAATA+TGG - tig0010244:56132-56151 Msa1348230:CDS 15.0%
!! ATTTATATATGCATGAATAT+GGG - tig0010244:56133-56152 Msa1348230:CDS 15.0%
!! TAATATATTATTACGAAGAA+AGG - tig0010244:56482-56501 Msa1348230:intron 15.0%
!! ATACAAGATAATATGAAATT+TGG - tig0010244:57089-57108 Msa1348230:intron 15.0%
!! TTTCAGGAAAATATTAATTA+TGG + tig0010244:58380-58399 None:intergenic 15.0%
!!! TATTTAATTATGGTTTTTTC+AGG + tig0010244:58396-58415 None:intergenic 15.0%
!! TAAAGTAAATTGTCAATAAA+CGG + tig0010244:59669-59688 None:intergenic 15.0%
!! CATAAAAAATAGTATAGACT+TGG - tig0010244:53205-53224 Msa1348230:intron 20.0%
!! AAGTAAGTTTCTTTGTATTT+AGG - tig0010244:53336-53355 Msa1348230:CDS 20.0%
!! AGTAAGTTTCTTTGTATTTA+GGG - tig0010244:53337-53356 Msa1348230:CDS 20.0%
!!! TTATTTTCTCAAATTATCAG+CGG + tig0010244:53573-53592 None:intergenic 20.0%
!!! GAGAAAAAAAAAAAGGTATA+TGG + tig0010244:54288-54307 None:intergenic 20.0%
!! AAAACTAATGTATATTCTTG+CGG - tig0010244:54395-54414 Msa1348230:intron 20.0%
!! TATTCAAAACATATCAACAT+AGG - tig0010244:54699-54718 Msa1348230:intron 20.0%
!! ATTCAAAACATATCAACATA+GGG - tig0010244:54700-54719 Msa1348230:intron 20.0%
!! TAATAGACTATTACTTTAGA+AGG + tig0010244:55026-55045 None:intergenic 20.0%
!! TTTCTATTATAAATGTTTGC+TGG - tig0010244:55071-55090 Msa1348230:intron 20.0%
!! GTGTATATAGTATTAATTGA+AGG + tig0010244:55262-55281 None:intergenic 20.0%
!! AAATTATCCAAATCAACTAT+TGG + tig0010244:55324-55343 None:intergenic 20.0%
!!! AATAGTTGATTTGGATAATT+TGG - tig0010244:55323-55342 Msa1348230:intron 20.0%
!!! TTCAAAATGAATGTTGTTTA+AGG + tig0010244:55404-55423 None:intergenic 20.0%
!!! AAACAACATTCATTTTGAAA+CGG - tig0010244:55405-55424 Msa1348230:intron 20.0%
!!! GTAGTAATTAACTATGTTTT+TGG - tig0010244:55433-55452 Msa1348230:intron 20.0%
!!! AACTTTTCTTTACAATAATG+AGG - tig0010244:55555-55574 Msa1348230:intron 20.0%
!! GTAATGAGTACTTAAAAAAA+GGG + tig0010244:55832-55851 None:intergenic 20.0%
!! TGTAATGAGTACTTAAAAAA+AGG + tig0010244:55833-55852 None:intergenic 20.0%
!! TTAAATACATTTATACACCA+AGG + tig0010244:55930-55949 None:intergenic 20.0%
!! AAAGAAATATTGAAACCTAT+GGG + tig0010244:56451-56470 None:intergenic 20.0%
!! AAAAGAAATATTGAAACCTA+TGG + tig0010244:56452-56471 None:intergenic 20.0%
!!! GTCTTTTTTGCTTATATTTT+GGG + tig0010244:56749-56768 None:intergenic 20.0%
!!! TGTCTTTTTTGCTTATATTT+TGG + tig0010244:56750-56769 None:intergenic 20.0%
!!! GAATAAACAAAAGTTTTTCT+TGG + tig0010244:56817-56836 None:intergenic 20.0%
!!! GATGTAAAAACAATTTTCAT+TGG + tig0010244:56904-56923 None:intergenic 20.0%
!!! TTCTTTGGAAAAAGTTTTAT+AGG + tig0010244:56929-56948 None:intergenic 20.0%
!!! ATAGTTTTTTGTGTTTTCTT+TGG + tig0010244:56944-56963 None:intergenic 20.0%
!! AAAACCAAAACATAAGAATT+TGG + tig0010244:56970-56989 None:intergenic 20.0%
!! AAGTAGAACTAGAATTAAAA+GGG - tig0010244:57380-57399 Msa1348230:intron 20.0%
!! ATTTAGAGATGATTTATGAT+AGG - tig0010244:57407-57426 Msa1348230:intron 20.0%
!! TTTAGAGATGATTTATGATA+GGG - tig0010244:57408-57427 Msa1348230:intron 20.0%
!! TGATAAGATCTTAAATCTAA+TGG + tig0010244:57846-57865 None:intergenic 20.0%
!!! AAGTATCGAGAATTTTTTAT+GGG + tig0010244:57928-57947 None:intergenic 20.0%
!!! AAAGTATCGAGAATTTTTTA+TGG + tig0010244:57929-57948 None:intergenic 20.0%
!! AAAAAATTCTCGATACTTTA+CGG - tig0010244:57930-57949 Msa1348230:intron 20.0%
!!! ATATTTTTTGGTTTGATGTT+TGG + tig0010244:58008-58027 None:intergenic 20.0%
!! CTATGGTAAAATTAACAAAT+AGG + tig0010244:58209-58228 None:intergenic 20.0%
!! AATTCAATTTCACTTTCAAT+TGG + tig0010244:58241-58260 None:intergenic 20.0%
!!! AAAGAATTTTACATCTTCAT+GGG + tig0010244:58431-58450 None:intergenic 20.0%
!!! AAAAGAATTTTACATCTTCA+TGG + tig0010244:58432-58451 None:intergenic 20.0%
!!! ATGAAGATGTAAAATTCTTT+TGG - tig0010244:58431-58450 Msa1348230:intron 20.0%
!! AATATTCCCTTTAAATCTAA+TGG - tig0010244:58598-58617 Msa1348230:CDS 20.0%
!!! TTTTGACCATTAGATTTAAA+GGG + tig0010244:58607-58626 None:intergenic 20.0%
!!! ATTTTGACCATTAGATTTAA+AGG + tig0010244:57836-57855 None:intergenic 20.0%
!!! AAAATTTATTTTCCCATGAT+GGG - tig0010244:58623-58642 Msa1348230:intron 20.0%
!! TTCTACTAATTACTTTAAAC+TGG + tig0010244:58680-58699 None:intergenic 20.0%
!! AAAGAATAACAAAATTTCTG+TGG + tig0010244:58823-58842 None:intergenic 20.0%
!!! AATATCTTTCTAATTTGTTG+AGG - tig0010244:59374-59393 Msa1348230:CDS 20.0%
!!! AATTGGTTTGGATTGAATTT+TGG + tig0010244:52791-52810 None:intergenic 25.0%
!!! TCATCACAATTCTAAAATCA+TGG - tig0010244:53034-53053 Msa1348230:CDS 25.0%
! AGTGTAGTGACATAAATATT+AGG + tig0010244:53465-53484 None:intergenic 25.0%
! TTACAATAAACAACCAATGT+CGG + tig0010244:53714-53733 None:intergenic 25.0%
! TTCACAGGAGAAAAAAAAAA+AGG + tig0010244:54295-54314 None:intergenic 25.0%
! TTGAAATGGCTTAAATCATA+TGG + tig0010244:54429-54448 None:intergenic 25.0%
! AAATCTAGCAAACTCTTTAA+AGG - tig0010244:54466-54485 Msa1348230:intron 25.0%
! TCAGCATAAACAATAGATTA+TGG + tig0010244:54524-54543 None:intergenic 25.0%
! TCTATTGTTTATGCTGAATT+AGG - tig0010244:54527-54546 Msa1348230:intron 25.0%
! TTCAAAACATATCAACATAG+GGG - tig0010244:54701-54720 Msa1348230:intron 25.0%
! ATGCAAACTTTGTATGTTTA+TGG - tig0010244:54802-54821 Msa1348230:intron 25.0%
! TTTCCATGATAAAGTGAAAA+AGG + tig0010244:54831-54850 None:intergenic 25.0%
!!! ACAAAAAGTTGATATTGCAT+TGG + tig0010244:55226-55245 None:intergenic 25.0%
! AAACAAACCAATAGTTGATT+TGG - tig0010244:55314-55333 Msa1348230:intron 25.0%
!! AAAATCCATTCACATGTTTT+GGG + tig0010244:55643-55662 None:intergenic 25.0%
!! TAAAATCCATTCACATGTTT+TGG + tig0010244:55644-55663 None:intergenic 25.0%
!! TTTTACACTGCAAGATTAAA+TGG + tig0010244:55695-55714 None:intergenic 25.0%
!! ATTTAGTTTATACAAACCTG+AGG + tig0010244:55787-55806 None:intergenic 25.0%
!!! AATGGATTGTGTAATAAACA+TGG - tig0010244:55874-55893 Msa1348230:intron 25.0%
! GATAATTACTATGTTATCCT+TGG - tig0010244:55910-55929 Msa1348230:intron 25.0%
! TAAATACTTCAAACAGTGAT+AGG + tig0010244:56385-56404 None:intergenic 25.0%
!! GTTTGAAGTATTTAACTACT+TGG - tig0010244:56391-56410 Msa1348230:intron 25.0%
!! TACTCCAAATTCTTATGTTT+TGG - tig0010244:56963-56982 Msa1348230:intron 25.0%
!! TTTTCCCTTATAATTTGAGA+CGG - tig0010244:57011-57030 Msa1348230:intron 25.0%
! AAATTTGGTATATGTATCAG+AGG - tig0010244:57104-57123 Msa1348230:intron 25.0%
! AGGACTAAAATATGAAAAGA+TGG - tig0010244:57138-57157 Msa1348230:intron 25.0%
! ACTAAAATATGAAAAGATGG+TGG - tig0010244:57141-57160 Msa1348230:intron 25.0%
! ATCAGTAAGTTAGAGTTAAA+AGG - tig0010244:57221-57240 Msa1348230:intron 25.0%
! TTAAAAGGTGATCAAGTAAA+TGG - tig0010244:57236-57255 Msa1348230:intron 25.0%
! ATCAGTAAGTTAGAGTTAAA+AGG - tig0010244:57221-57240 Msa1348230:intron 25.0%
! GAAGTAGAACTAGAATTAAA+AGG - tig0010244:57379-57398 Msa1348230:intron 25.0%
! AGTAGAACTAGAATTAAAAG+GGG - tig0010244:57381-57400 Msa1348230:intron 25.0%
! TCAACAAAACTACATATTGT+TGG + tig0010244:57683-57702 None:intergenic 25.0%
!!! TCACTAGTTTTGTAAGTAAA+AGG + tig0010244:57749-57768 None:intergenic 25.0%
! TAGTGACATATGTAGTTTAA+AGG - tig0010244:57763-57782 Msa1348230:CDS 25.0%
! AGTGACATATGTAGTTTAAA+GGG - tig0010244:57764-57783 Msa1348230:CDS 25.0%
! AAGTGGAAAAAAATATAGTG+TGG + tig0010244:57877-57896 None:intergenic 25.0%
! TGGATTGTAGAAATCATTAA+TGG + tig0010244:58315-58334 None:intergenic 25.0%
!! CTTTGTTATCTCAATCAAAT+TGG + tig0010244:58335-58354 None:intergenic 25.0%
! CAATTTGATTGAGATAACAA+AGG - tig0010244:58333-58352 Msa1348230:intron 25.0%
!!! TTTATAGTTTGTTGGAATCA+TGG - tig0010244:58487-58506 Msa1348230:CDS 25.0%
! GAAGTGGAAAAAATATAATG+TGG - tig0010244:58557-58576 Msa1348230:CDS 25.0%
!!! CAAAATTTATTTTCCCATGA+TGG - tig0010244:58622-58641 Msa1348230:intron 25.0%
! TACTAATTACTTTAAACTGG+TGG + tig0010244:58677-58696 None:intergenic 25.0%
! TGAAATAAGGAAAACAAAGA+AGG + tig0010244:58728-58747 None:intergenic 25.0%
! TCTCTTTATAAACACAACTA+GGG + tig0010244:59314-59333 None:intergenic 25.0%
! ATCTCTTTATAAACACAACT+AGG + tig0010244:59315-59334 None:intergenic 25.0%
! TCTTGTGATTATTATTGAGA+GGG + tig0010244:59534-59553 None:intergenic 25.0%
! ATCTTGTGATTATTATTGAG+AGG + tig0010244:59535-59554 None:intergenic 25.0%
! TAGTTAAATGAATCACGATT+TGG + tig0010244:59617-59636 None:intergenic 25.0%
GGATTAAGCAACAAAAAATG+TGG - tig0010244:53358-53377 Msa1348230:intron 30.0%
TTCGATGTAGCTTATAGTTA+AGG + tig0010244:53434-53453 None:intergenic 30.0%
TTATGTGTTGTATTTGCCAA+CGG - tig0010244:53491-53510 Msa1348230:CDS 30.0%
!!! TGAACTTTTTGGTTCATGTT+TGG - tig0010244:53684-53703 Msa1348230:intron 30.0%
AAGCATTAAGGAAGAACATA+TGG + tig0010244:54033-54052 None:intergenic 30.0%
TATGTTCTTCCTTAATGCTT+TGG - tig0010244:54033-54052 Msa1348230:intron 30.0%
! TTGTGAAAACCAAAGCATTA+AGG + tig0010244:54045-54064 None:intergenic 30.0%
CACACAATTAAGTGACTAAA+TGG + tig0010244:54088-54107 None:intergenic 30.0%
CATTTAGTCACTTAATTGTG+TGG - tig0010244:54086-54105 Msa1348230:intron 30.0%
AATTTGCAATAAGTCAGTAG+TGG + tig0010244:54165-54184 None:intergenic 30.0%
!!! AGTTCTTGGATAGTTTTATC+TGG + tig0010244:54208-54227 None:intergenic 30.0%
AAATACCTTCACTGATAAGA+TGG + tig0010244:54251-54270 None:intergenic 30.0%
!! AAAGAGTTTGCTAGATTTCA+AGG + tig0010244:54464-54483 None:intergenic 30.0%
TTAGGTAATTATAGTAGACG+AGG - tig0010244:54629-54648 Msa1348230:intron 30.0%
!! GAAATTGGTCTTATCTGAAA+AGG - tig0010244:54659-54678 Msa1348230:intron 30.0%
!! CATCCTTTTTCACTTTATCA+TGG - tig0010244:54825-54844 Msa1348230:intron 30.0%
!! TTCTGAGATATGTATTAGTC+CGG + tig0010244:54899-54918 None:intergenic 30.0%
!! ACTTTAGAAGGCATCAATAT+CGG + tig0010244:55014-55033 None:intergenic 30.0%
!! GTTTTAGTATCATTGCTTGT+TGG - tig0010244:55108-55127 Msa1348230:intron 30.0%
!! AAACGACACTCATTTTGAAA+CGG + tig0010244:55159-55178 None:intergenic 30.0%
!!! AACATTCATTTTGAAACGGA+GGG - tig0010244:55409-55428 Msa1348230:intron 30.0%
AATCTTGCAGTGTAAAAATG+AGG - tig0010244:55698-55717 Msa1348230:intron 30.0%
TGAGTACTTAAAAAAAGGGA+CGG + tig0010244:55828-55847 None:intergenic 30.0%
ACACCTACTAATTTGAAAGA+GGG - tig0010244:56025-56044 Msa1348230:intron 30.0%
ATAGATAGTAATAATGCCCA+AGG - tig0010244:56505-56524 Msa1348230:intron 30.0%
TTGTTGGATTTCTTATCCTT+GGG + tig0010244:56524-56543 None:intergenic 30.0%
ATTGTTGGATTTCTTATCCT+TGG + tig0010244:56525-56544 None:intergenic 30.0%
!! CTTTCGTTTTTCTGTATTGT+TGG + tig0010244:56540-56559 None:intergenic 30.0%
!! TTTACATTTTTGAGCCACTT+TGG + tig0010244:56569-56588 None:intergenic 30.0%
CAAAAATGTAAACAGATGCT+TGG - tig0010244:56577-56596 Msa1348230:intron 30.0%
!!! GGTGTGGTTTCTTTTTTATT+AGG + tig0010244:56625-56644 None:intergenic 30.0%
!! TTTTCATTGGCTATTCGTTA+TGG + tig0010244:56891-56910 None:intergenic 30.0%
ATATGTATCAGAGGAAAATC+AGG - tig0010244:57113-57132 Msa1348230:intron 30.0%
TATGTATCAGAGGAAAATCA+GGG - tig0010244:57114-57133 Msa1348230:intron 30.0%
!! TCATTTGATTACCGTTTTTC+TGG - tig0010244:57443-57462 Msa1348230:intron 30.0%
TAACTCATCATTACACTCAT+TGG - tig0010244:57613-57632 Msa1348230:intron 30.0%
!! CAAAATTTATTTTCCCATGG+TGG + tig0010244:57822-57841 None:intergenic 30.0%
!! GGTCAAAATTTATTTTCCCA+TGG + tig0010244:58619-58638 None:intergenic 30.0%
!!! ATTTTTTATGGGTTGTTTGC+AGG + tig0010244:57917-57936 None:intergenic 30.0%
GATGGTGAGTAAAATTTGTA+GGG + tig0010244:58114-58133 None:intergenic 30.0%
AAATGATGAAGCAACATGAT+GGG + tig0010244:58136-58155 None:intergenic 30.0%
AAAATGATGAAGCAACATGA+TGG + tig0010244:58137-58156 None:intergenic 30.0%
TGATTGAGATAACAAAGGAA+AGG - tig0010244:58338-58357 Msa1348230:intron 30.0%
GATTGAGATAACAAAGGAAA+GGG - tig0010244:58339-58358 Msa1348230:intron 30.0%
! GTAAAATTCTTTTGGTCAAG+TGG - tig0010244:58439-58458 Msa1348230:intron 30.0%
! GTGTAGAGTTTATAGTTTGT+TGG - tig0010244:58479-58498 Msa1348230:CDS 30.0%
GGAAAAAATATAATGTGGAG+AGG - tig0010244:58562-58581 Msa1348230:CDS 30.0%
AATAAGGAAAACAAAGAAGG+TGG + tig0010244:58725-58744 None:intergenic 30.0%
TCAACTCGTACATTGAAATA+AGG + tig0010244:58741-58760 None:intergenic 30.0%
TTTCCTGATATCTGAATCTT+TGG - tig0010244:59103-59122 Msa1348230:intron 30.0%
! ATCCACTTCATGATAATGTT+GGG - tig0010244:59286-59305 Msa1348230:intron 30.0%
CAGCTTTCACATCTATTTAA+AGG - tig0010244:59561-59580 Msa1348230:CDS 30.0%
CATTTAACTAACTCGCAAAA+AGG - tig0010244:59627-59646 Msa1348230:five_prime_UTR 30.0%
TGAAGCGATAGATAGAATAG+AGG + tig0010244:52759-52778 None:intergenic 35.0%
ATTGAAAGGATTGACGATTG+AGG + tig0010244:52961-52980 None:intergenic 35.0%
CATATTGATGAATTCGACAG+TGG - tig0010244:53086-53105 Msa1348230:intron 35.0%
AAATGAAGAAATACAGACCC+TGG + tig0010244:53162-53181 None:intergenic 35.0%
TATGTGTTGTATTTGCCAAC+GGG - tig0010244:53492-53511 Msa1348230:CDS 35.0%
! GCACAAATGGTTGAACTTTT+TGG - tig0010244:53673-53692 Msa1348230:intron 35.0%
ACATTGCTTGTGATTCTCTT+TGG - tig0010244:53744-53763 Msa1348230:intron 35.0%
! TAGAACACAACACGTTTTAG+AGG + tig0010244:53817-53836 None:intergenic 35.0%
TGGACTCATTTACAATGGTA+GGG - tig0010244:53903-53922 Msa1348230:intron 35.0%
ATTTACAATGGTAGGGTTGA+GGG - tig0010244:53910-53929 Msa1348230:intron 35.0%
! GTTCGGTTTTACTCTATCAT+GGG - tig0010244:53955-53974 Msa1348230:intron 35.0%
!! TGGCATCGATATAGTATCAT+AGG + tig0010244:54068-54087 None:intergenic 35.0%
!! TATCTGGTTCTGAACAGAAA+AGG + tig0010244:54192-54211 None:intergenic 35.0%
AGATAGAGAAGCCACAAATA+GGG + tig0010244:54323-54342 None:intergenic 35.0%
TAGATAGAGAAGCCACAAAT+AGG + tig0010244:54324-54343 None:intergenic 35.0%
TATTAGTCCAGCTAAAGCTT+CGG - tig0010244:54342-54361 Msa1348230:intron 35.0%
TTATGGTACCAAAATGATGC+AGG + tig0010244:54507-54526 None:intergenic 35.0%
ATTTCTTAAACCTAGCATGC+AGG + tig0010244:54568-54587 None:intergenic 35.0%
TGCATGCTAGGTTTAAGAAA+TGG - tig0010244:54567-54586 Msa1348230:intron 35.0%
!!! CGGTACTTTCTTTTGACTTT+AGG - tig0010244:54611-54630 Msa1348230:intron 35.0%
TTATAGTAGACGAGGAGAAA+CGG - tig0010244:54637-54656 Msa1348230:intron 35.0%
TATCTGAAAAGGAAGCTTCA+TGG - tig0010244:54670-54689 Msa1348230:intron 35.0%
AGATATGTATTAGTCCGGTA+AGG + tig0010244:54894-54913 None:intergenic 35.0%
!! TACATATCTCAGAAGTGTCA+TGG - tig0010244:54905-54924 Msa1348230:intron 35.0%
!! ACATATCTCAGAAGTGTCAT+GGG - tig0010244:54906-54925 Msa1348230:intron 35.0%
GTAAGAGACTTCTTAAGAGA+AGG - tig0010244:54943-54962 Msa1348230:intron 35.0%
! GAGGGAGTATAAAGGAAATT+GGG + tig0010244:55137-55156 None:intergenic 35.0%
!!! CAACATTCATTTTGAAACGG+AGG - tig0010244:55408-55427 Msa1348230:intron 35.0%
!! TTTTGGGAGAGTTTATGACA+TGG + tig0010244:55627-55646 None:intergenic 35.0%
CACACCTACTAATTTGAAAG+AGG - tig0010244:56024-56043 Msa1348230:intron 35.0%
AAGCCCTCTTTCAAATTAGT+AGG + tig0010244:56031-56050 None:intergenic 35.0%
TTGAAAGAGGGCTTGTATTT+AGG - tig0010244:56037-56056 Msa1348230:intron 35.0%
TGAAAGAGGGCTTGTATTTA+GGG - tig0010244:56038-56057 Msa1348230:intron 35.0%
AATACTTGAAGAGCTATTGC+AGG - tig0010244:56345-56364 Msa1348230:intron 35.0%
! GATGGATCTATCTCTGATTT+TGG + tig0010244:56422-56441 None:intergenic 35.0%
AGGTTCAAGAAAAGGTAGAT+AGG - tig0010244:57041-57060 Msa1348230:intron 35.0%
GTAGATAGGCATGTTATGAT+GGG - tig0010244:57055-57074 Msa1348230:intron 35.0%
TAGATAGGCATGTTATGATG+GGG - tig0010244:57056-57075 Msa1348230:intron 35.0%
! ATGTTATGATGGGGATTAGT+AGG - tig0010244:57065-57084 Msa1348230:intron 35.0%
ATGTATCAGAGGAAAATCAG+GGG - tig0010244:57115-57134 Msa1348230:intron 35.0%
!! ATGAAAAGATGGTGGAATCT+CGG - tig0010244:57149-57168 Msa1348230:intron 35.0%
TACTGATCTGTTCTCTTTAC+TGG + tig0010244:57208-57227 None:intergenic 35.0%
AAAGGTGATCAAGTAAATGG+TGG - tig0010244:57239-57258 Msa1348230:intron 35.0%
! TCAAGTAAATGGTGGAATCT+CGG - tig0010244:57247-57266 Msa1348230:intron 35.0%
TACTGATCTGTTCTCTTTAC+TGG + tig0010244:57208-57227 None:intergenic 35.0%
TACATAACTCCTGTTACTGT+TGG - tig0010244:57482-57501 Msa1348230:intron 35.0%
AGAAATCTTCCAACAGTAAC+AGG + tig0010244:57494-57513 None:intergenic 35.0%
TCTCCTTATTCTACAAGCTA+AGG - tig0010244:57511-57530 Msa1348230:CDS 35.0%
!! TCTCCTTAGCTTGTAGAATA+AGG + tig0010244:57517-57536 None:intergenic 35.0%
TATTCTACAAGCTAAGGAGA+TGG - tig0010244:57517-57536 Msa1348230:CDS 35.0%
GTTGGATGATTCAGACAATT+CGG + tig0010244:57665-57684 None:intergenic 35.0%
!! TGTTGATAATTGCTGCTCTT+TGG - tig0010244:57697-57716 Msa1348230:intron 35.0%
GACATATGTAGTTTAAAGGG+TGG - tig0010244:57767-57786 Msa1348230:CDS 35.0%
TAGTTTAAAGGGTGGCATTT+AGG - tig0010244:57775-57794 Msa1348230:CDS 35.0%
AGTTTAAAGGGTGGCATTTA+GGG - tig0010244:57776-57795 Msa1348230:CDS 35.0%
!! TTATTTTCCCATGGTGGAAA+AGG + tig0010244:57816-57835 None:intergenic 35.0%
TGGAAACTGGATACGAAAAT+GGG + tig0010244:57988-58007 None:intergenic 35.0%
TTGGAAACTGGATACGAAAA+TGG + tig0010244:57989-58008 None:intergenic 35.0%
! TTGGTTTGATGTTTGGAAAC+TGG + tig0010244:58001-58020 None:intergenic 35.0%
GAGTAAAATTTGTAGGGTGT+AGG + tig0010244:58108-58127 None:intergenic 35.0%
GGATGGTGAGTAAAATTTGT+AGG + tig0010244:58115-58134 None:intergenic 35.0%
TTTACCTTCAGCAACAACAA+TGG - tig0010244:58173-58192 Msa1348230:intron 35.0%
! AAATCCATTGTTGTTGCTGA+AGG + tig0010244:58180-58199 None:intergenic 35.0%
TCAATTGGTGAGAGAAACTA+TGG + tig0010244:58226-58245 None:intergenic 35.0%
CTGGCATCGCTATTTAATTA+TGG + tig0010244:58406-58425 None:intergenic 35.0%
! TTTTACATCTTCATGGGTTC+TGG + tig0010244:58425-58444 None:intergenic 35.0%
TTTGTTGGAATCATGGTTTC+TGG - tig0010244:58494-58513 Msa1348230:CDS 35.0%
!! TTATTTTCCCATGATGGGAA+AGG - tig0010244:58628-58647 Msa1348230:intron 35.0%
CTTTAAACTGGTGGCATTTA+GGG + tig0010244:58668-58687 None:intergenic 35.0%
ACTTTAAACTGGTGGCATTT+AGG + tig0010244:58669-58688 None:intergenic 35.0%
AAGAAGGTGGAACTATGTTA+TGG + tig0010244:58712-58731 None:intergenic 35.0%
TGACCAAAGATTCAGATATC+AGG + tig0010244:59109-59128 None:intergenic 35.0%
! CATCCACTTCATGATAATGT+TGG - tig0010244:59285-59304 Msa1348230:intron 35.0%
! TCCACTTCATGATAATGTTG+GGG - tig0010244:59287-59306 Msa1348230:intron 35.0%
AAAGGCAATACAACGAGTAT+TGG - tig0010244:59476-59495 Msa1348230:CDS 35.0%
AGTGCAATCAATCAGATTCA+AGG + tig0010244:59510-59529 None:intergenic 35.0%
AAGAGGAAGAGGAATTGGTT+TGG + tig0010244:52803-52822 None:intergenic 40.0%
AGAAGAAGAGGAAGAGGAAT+TGG + tig0010244:52808-52827 None:intergenic 40.0%
TTCCGTTGTTGAACTCGAAA+TGG - tig0010244:52851-52870 Msa1348230:three_prime_UTR 40.0%
!! AGCCATTTCGAGTTCAACAA+CGG + tig0010244:52856-52875 None:intergenic 40.0%
TGATTGTGAAGATGAGAGGA+AGG + tig0010244:52916-52935 None:intergenic 40.0%
GTTGTGATTGTGAAGATGAG+AGG + tig0010244:52920-52939 None:intergenic 40.0%
TGACGATTGAGGAAGAAGAA+GGG + tig0010244:52950-52969 None:intergenic 40.0%
TTGACGATTGAGGAAGAAGA+AGG + tig0010244:52951-52970 None:intergenic 40.0%
GGGCATTTAGGGAAATTGAA+AGG + tig0010244:52975-52994 None:intergenic 40.0%
!! ACGAAGAGCATCATAAGAGT+CGG + tig0010244:53135-53154 None:intergenic 40.0%
ATGTGTTGTATTTGCCAACG+GGG - tig0010244:53493-53512 Msa1348230:intron 40.0%
AATCACAAGCAATGTCAGCA+AGG + tig0010244:53739-53758 None:intergenic 40.0%
TGAAGTAGAGATCGTCAGAT+TGG - tig0010244:53854-53873 Msa1348230:intron 40.0%
! GACAGTGGACTCATTTACAA+TGG - tig0010244:53898-53917 Msa1348230:intron 40.0%
GTGGACTCATTTACAATGGT+AGG - tig0010244:53902-53921 Msa1348230:intron 40.0%
CATTTACAATGGTAGGGTTG+AGG - tig0010244:53909-53928 Msa1348230:intron 40.0%
!! GGTTCGGTTTTACTCTATCA+TGG - tig0010244:53954-53973 Msa1348230:intron 40.0%
ATACCTTGACATGAATGCAC+GGG + tig0010244:54006-54025 None:intergenic 40.0%
GATACCTTGACATGAATGCA+CGG + tig0010244:54007-54026 None:intergenic 40.0%
! TCACTTAATTGTGTGGACTG+TGG - tig0010244:54093-54112 Msa1348230:intron 40.0%
TCAACTCTCTTGCAAGTTCT+TGG + tig0010244:54222-54241 None:intergenic 40.0%
! GAACTTGCAAGAGAGTTGAT+CGG - tig0010244:54223-54242 Msa1348230:intron 40.0%
ACAAATAGGGTTGGATTCAC+AGG + tig0010244:54310-54329 None:intergenic 40.0%
TGTGAATCCAACCCTATTTG+TGG - tig0010244:54309-54328 Msa1348230:intron 40.0%
!! TTTTATGCCGAAGCTTTAGC+TGG + tig0010244:54352-54371 None:intergenic 40.0%
GGTTCAGATAGTGCTTGAAA+TGG + tig0010244:54443-54462 None:intergenic 40.0%
! TAGTGCTTCCTGCATCATTT+TGG - tig0010244:54496-54515 Msa1348230:intron 40.0%
! ACATTTTCAACCTGCATGCT+AGG - tig0010244:54555-54574 Msa1348230:intron 40.0%
!!! GACCTTTTTGAAGCAAGAGT+CGG - tig0010244:54723-54742 Msa1348230:intron 40.0%
! AACCGACTCTTGCTTCAAAA+AGG + tig0010244:54728-54747 None:intergenic 40.0%
TTGCATAGTAGTTACCGTCA+GGG + tig0010244:54788-54807 None:intergenic 40.0%
TTTGCATAGTAGTTACCGTC+AGG + tig0010244:54789-54808 None:intergenic 40.0%
TAAGAGAAGGTGAAGAAGTG+AGG - tig0010244:54956-54975 Msa1348230:intron 40.0%
AAGAGAAGGTGAAGAAGTGA+GGG - tig0010244:54957-54976 Msa1348230:intron 40.0%
! GGAGGGAGTATAAAGGAAAT+TGG + tig0010244:55138-55157 None:intergenic 40.0%
! TTGAAACGGAGGGAGTATAA+AGG + tig0010244:55145-55164 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + tig0010244:55155-55174 None:intergenic 40.0%
ACTCTCCCAAAACATGTGAA+TGG - tig0010244:55635-55654 Msa1348230:intron 40.0%
TCTGGACAAAGTAATACCTC+AGG - tig0010244:55768-55787 Msa1348230:intron 40.0%
GTACTTAAAAAAAGGGACGG+AGG + tig0010244:55825-55844 None:intergenic 40.0%
TACACGTCTGTGTGAATATG+TGG - tig0010244:56164-56183 Msa1348230:CDS 40.0%
ACACGTCTGTGTGAATATGT+GGG - tig0010244:56165-56184 Msa1348230:CDS 40.0%
ACACGCTCATACACACATTT+AGG + tig0010244:56201-56220 None:intergenic 40.0%
! AACTCCGAGTTTCATTTTGC+AGG - tig0010244:56249-56268 Msa1348230:intron 40.0%
CCATCCTGCAAAATGAAACT+CGG + tig0010244:56256-56275 None:intergenic 40.0%
GTAGTACTGCTGAAAGAATC+AGG + tig0010244:56289-56308 None:intergenic 40.0%
AAGAGCTATTGCAGGAAGAT+GGG - tig0010244:56353-56372 Msa1348230:intron 40.0%
TATTGAAACCTATGGGCCAA+GGG + tig0010244:56444-56463 None:intergenic 40.0%
ATATTGAAACCTATGGGCCA+AGG + tig0010244:56445-56464 None:intergenic 40.0%
AACGAAAGCAAATGCCAAAG+TGG - tig0010244:56552-56571 Msa1348230:intron 40.0%
! ATGTCTTGCGTAATGGGATA+AGG + tig0010244:56646-56665 None:intergenic 40.0%
TCAAGGATGTCTTGCGTAAT+GGG + tig0010244:56652-56671 None:intergenic 40.0%
ATCAAGGATGTCTTGCGTAA+TGG + tig0010244:56653-56672 None:intergenic 40.0%
TGCTTATATTATGGGACGGA+GGG + tig0010244:56705-56724 None:intergenic 40.0%
! TCCCTTATAATTTGAGACGG+AGG - tig0010244:57014-57033 Msa1348230:intron 40.0%
CCCTCCGTCTCAAATTATAA+GGG + tig0010244:57018-57037 None:intergenic 40.0%
! CCCTTATAATTTGAGACGGA+GGG - tig0010244:57015-57034 Msa1348230:intron 40.0%
TCCCTCCGTCTCAAATTATA+AGG + tig0010244:57019-57038 None:intergenic 40.0%
GGTAGATAGGCATGTTATGA+TGG - tig0010244:57054-57073 Msa1348230:intron 40.0%
! AATGGTGGAATCTCGGTATT+AGG - tig0010244:57254-57273 Msa1348230:intron 40.0%
GCAAGCAGTTTCCAGAAAAA+CGG + tig0010244:57457-57476 None:intergenic 40.0%
GTAAGTAAAAGGATCAGAGC+AGG + tig0010244:57738-57757 None:intergenic 40.0%
! GAAGAATCCTTTTCCACCAT+GGG - tig0010244:57806-57825 Msa1348230:CDS 40.0%
! TTATGGGTTGTTTGCAGGTT+GGG + tig0010244:57912-57931 None:intergenic 40.0%
! TTTATGGGTTGTTTGCAGGT+TGG + tig0010244:57913-57932 None:intergenic 40.0%
AAATGCTTTCACGCTGCTTA+AGG - tig0010244:57956-57975 Msa1348230:intron 40.0%
AATGCTTTCACGCTGCTTAA+GGG - tig0010244:57957-57976 Msa1348230:intron 40.0%
AAATTTGTAGGGTGTAGGCA+AGG + tig0010244:58103-58122 None:intergenic 40.0%
TGTTGTTGCTGAAGGTAAAG+TGG + tig0010244:58172-58191 None:intergenic 40.0%
! GGAATCATGGTTTCTGGAAA+AGG - tig0010244:58500-58519 Msa1348230:CDS 40.0%
! ACAAAGATGGGATAATGGTC+TGG - tig0010244:58528-58547 Msa1348230:CDS 40.0%
! TGGGATAATGGTCTGGTAAA+AGG - tig0010244:58535-58554 Msa1348230:CDS 40.0%
AATGGTCTGGTAAAAGGAAG+TGG - tig0010244:58541-58560 Msa1348230:CDS 40.0%
GAAGAATCCTTTCCCATCAT+GGG + tig0010244:58638-58657 None:intergenic 40.0%
AAGGTGGAACTATGTTATGG+TGG + tig0010244:58709-58728 None:intergenic 40.0%
AGAGTAAACCTTTGGTCCAT+GGG + tig0010244:59144-59163 None:intergenic 40.0%
ACCCCAACATTATCATGAAG+TGG + tig0010244:59291-59310 None:intergenic 40.0%
GAACCAATTCGCGTTGTTGA+CGG + tig0010244:52834-52853 None:intergenic 45.0%
TGAAGATGAGAGGAAGGACA+TGG + tig0010244:52910-52929 None:intergenic 45.0%
!! GTAACTTGCGAGGGCATTTA+GGG + tig0010244:52986-53005 None:intergenic 45.0%
!! CGAAGAGCATCATAAGAGTC+GGG + tig0010244:53134-53153 None:intergenic 45.0%
TGTGTTGTATTTGCCAACGG+GGG - tig0010244:53494-53513 Msa1348230:intron 45.0%
TTGTGCCAACCTATGAAGCA+CGG + tig0010244:53659-53678 None:intergenic 45.0%
! GCTTCATAGGTTGGCACAAA+TGG - tig0010244:53660-53679 Msa1348230:intron 45.0%
! CATGTTTGGAACTCCGACAT+TGG - tig0010244:53698-53717 Msa1348230:intron 45.0%
GTAGAGATCGTCAGATTGGA+AGG - tig0010244:53858-53877 Msa1348230:intron 45.0%
GCAAACGCATATAGAGACAG+TGG - tig0010244:53883-53902 Msa1348230:intron 45.0%
!! AGGGTTGAGGGTTTTAATGC+TGG - tig0010244:53922-53941 Msa1348230:intron 45.0%
!! GTTGAGGGTTTTAATGCTGG+AGG - tig0010244:53925-53944 Msa1348230:intron 45.0%
TAGAGTAAAACCGAACCAGC+AGG + tig0010244:53951-53970 None:intergenic 45.0%
TACCTTGACATGAATGCACG+GGG + tig0010244:54005-54024 None:intergenic 45.0%
CGGTTCCATCTTATCAGTGA+AGG - tig0010244:54243-54262 Msa1348230:intron 45.0%
AGAGAAGCCACAAATAGGGT+TGG + tig0010244:54319-54338 None:intergenic 45.0%
AGACGAGGAGAAACGGAAAT+TGG - tig0010244:54644-54663 Msa1348230:intron 45.0%
GCAGGTCTTTATCACCTTAC+CGG - tig0010244:54877-54896 Msa1348230:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + tig0010244:55156-55175 None:intergenic 45.0%
! CTTTGTCTCGAACCGACTTT+CGG - tig0010244:55485-55504 Msa1348230:intron 45.0%
ACAGCTTAGAGACCGAAAGT+CGG + tig0010244:55500-55519 None:intergenic 45.0%
AGATCCACTGCTAGAAACTC+TGG - tig0010244:55750-55769 Msa1348230:intron 45.0%
!! TTGTCCAGAGTTTCTAGCAG+TGG + tig0010244:55757-55776 None:intergenic 45.0%
CACGTCTGTGTGAATATGTG+GGG - tig0010244:56166-56185 Msa1348230:CDS 45.0%
! CCGAGTTTCATTTTGCAGGA+TGG - tig0010244:56253-56272 Msa1348230:intron 45.0%
! TCAAGTATTGTATCCAGCCC+CGG + tig0010244:56334-56353 None:intergenic 45.0%
GAAGAGCTATTGCAGGAAGA+TGG - tig0010244:56352-56371 Msa1348230:intron 45.0%
TCAGAGATAGATCCATCCCT+TGG - tig0010244:56425-56444 Msa1348230:intron 45.0%
! TTGCGTAATGGGATAAGGTG+TGG + tig0010244:56641-56660 None:intergenic 45.0%
! TAATTTGAGACGGAGGGAGT+AGG - tig0010244:57021-57040 Msa1348230:intron 45.0%
GAGGGAGTAGGTTCAAGAAA+AGG - tig0010244:57033-57052 Msa1348230:intron 45.0%
TATCAGAGGAAAATCAGGGG+AGG - tig0010244:57118-57137 Msa1348230:intron 45.0%
!! GATGGTGGAATCTCGGTATT+AGG - tig0010244:57156-57175 Msa1348230:intron 45.0%
CAGACAATTCGGATGTAGAC+TGG + tig0010244:57654-57673 None:intergenic 45.0%
AAAGGATCAGAGCAGGTCTT+AGG + tig0010244:57731-57750 None:intergenic 45.0%
TTAAAGGGTGGCATTTAGGG+TGG - tig0010244:57779-57798 Msa1348230:CDS 45.0%
! TAAAGGGTGGCATTTAGGGT+GGG - tig0010244:57780-57799 Msa1348230:CDS 45.0%
! GGAAGAATCCTTTTCCACCA+TGG - tig0010244:57805-57824 Msa1348230:CDS 45.0%
TTGGGAGGTTGAAGACAAAG+TGG + tig0010244:57894-57913 None:intergenic 45.0%
GAAGAGGAATGAGAAGGAGA+AGG + tig0010244:58081-58100 None:intergenic 45.0%
! GATGAAGCAACATGATGGGA+TGG + tig0010244:58132-58151 None:intergenic 45.0%
! TCATGGTTTCTGGAAAAGGC+AGG - tig0010244:58504-58523 Msa1348230:CDS 45.0%
GAAAAGGCAGGCACAAAGAT+GGG - tig0010244:58516-58535 Msa1348230:CDS 45.0%
CAGGCACAAAGATGGGATAA+TGG - tig0010244:58523-58542 Msa1348230:CDS 45.0%
GGAAGAATCCTTTCCCATCA+TGG + tig0010244:58639-58658 None:intergenic 45.0%
! AAACTGGTGGCATTTAGGGT+GGG + tig0010244:58664-58683 None:intergenic 45.0%
TAAACTGGTGGCATTTAGGG+TGG + tig0010244:58665-58684 None:intergenic 45.0%
GATGCAAGAATCAGTCGTCA+GGG - tig0010244:58987-59006 Msa1348230:intron 45.0%
ATGCAAGAATCAGTCGTCAG+GGG - tig0010244:58988-59007 Msa1348230:intron 45.0%
TCAGGGGTTTGAAAAACGAG+TGG - tig0010244:59004-59023 Msa1348230:intron 45.0%
TCTCACAAGACTTGCAGCTT+TGG - tig0010244:59027-59046 Msa1348230:intron 45.0%
TCTGAATCTTTGGTCATCCC+AGG - tig0010244:59113-59132 Msa1348230:intron 45.0%
GAGAGTAAACCTTTGGTCCA+TGG + tig0010244:59145-59164 None:intergenic 45.0%
GAGCAAGGAGAGTAAACCTT+TGG + tig0010244:59152-59171 None:intergenic 45.0%
TCTGAAAACATCCCTTGACC+AGG - tig0010244:59443-59462 Msa1348230:CDS 45.0%
AAAACATCCCTTGACCAGGA+AGG - tig0010244:59447-59466 Msa1348230:CDS 45.0%
TTTGATGCCTTCCTGGTCAA+GGG + tig0010244:59457-59476 None:intergenic 45.0%
! TTTTGATGCCTTCCTGGTCA+AGG + tig0010244:59458-59477 None:intergenic 45.0%
!! TGACCAGGAAGGCATCAAAA+AGG - tig0010244:59458-59477 Msa1348230:CDS 45.0%
! TTGCCTTTTTGATGCCTTCC+TGG + tig0010244:59464-59483 None:intergenic 45.0%
!!! ATTTTGAAATTATTTTTTTT+TGG + tig0010244:55185-55204 None:intergenic 5.0%
!!! ATTTTAAAACTTATATTTTT+TGG + tig0010244:58020-58039 None:intergenic 5.0%
TGTTGACGGTGGAGAAGAAG+AGG + tig0010244:52820-52839 None:intergenic 50.0%
GCTATCTTCTCTGCAACCCT+AGG - tig0010244:52873-52892 Msa1348230:three_prime_UTR 50.0%
TCTGCAACCCTAGGTTCCTT+CGG - tig0010244:52882-52901 Msa1348230:three_prime_UTR 50.0%
!! GGTAACTTGCGAGGGCATTT+AGG + tig0010244:52987-53006 None:intergenic 50.0%
! AAGGTGGTGGTAACTTGCGA+GGG + tig0010244:52995-53014 None:intergenic 50.0%
! GATGATGACGATAGTGCCAC+TGG + tig0010244:53019-53038 None:intergenic 50.0%
CATAAGAGTCGGGAGCAGAA+GGG + tig0010244:53124-53143 None:intergenic 50.0%
TCATAAGAGTCGGGAGCAGA+AGG + tig0010244:53125-53144 None:intergenic 50.0%
ATGATGCTCTTCGTCAAGCC+AGG - tig0010244:53141-53160 Msa1348230:intron 50.0%
TGATGCTCTTCGTCAAGCCA+GGG - tig0010244:53142-53161 Msa1348230:intron 50.0%
TTGTATTTGCCAACGGGGGT+TGG - tig0010244:53498-53517 Msa1348230:intron 50.0%
! GGGTTGGCACCTATGAAGTA+CGG - tig0010244:53514-53533 Msa1348230:intron 50.0%
GCACCTATGAAGTACGGACA+CGG - tig0010244:53520-53539 Msa1348230:intron 50.0%
GTTCCGTGTCCGTACTTCAT+AGG + tig0010244:53526-53545 None:intergenic 50.0%
AGTACGGACACGGAACACAA+CGG - tig0010244:53530-53549 Msa1348230:intron 50.0%
ATATGTGTCGTGTCCGACAC+TGG - tig0010244:53610-53629 Msa1348230:intron 50.0%
TATGTGTCGTGTCCGACACT+GGG - tig0010244:53611-53630 Msa1348230:intron 50.0%
GATTAGGCGTATCCCAGTGT+CGG + tig0010244:53626-53645 None:intergenic 50.0%
TATGAAGCACGGACACTGCT+CGG + tig0010244:53648-53667 None:intergenic 50.0%
AGTGTCCGTGCTTCATAGGT+TGG - tig0010244:53651-53670 Msa1348230:intron 50.0%
! TTTTAATGCTGGAGGCCTGC+TGG - tig0010244:53933-53952 Msa1348230:intron 50.0%
! AGCAAGAGTCGGTTCTGTTG+AGG - tig0010244:54734-54753 Msa1348230:intron 50.0%
! GTCGGTTCTGTTGAGGACTA+TGG - tig0010244:54741-54760 Msa1348230:intron 50.0%
GTGACATCACAGAATGCTGC+AGG - tig0010244:54859-54878 Msa1348230:intron 50.0%
TATTGTATCCAGCCCCGGTA+GGG + tig0010244:56329-56348 None:intergenic 50.0%
AGACATCCTTGATTGCTGCG+TGG - tig0010244:56660-56679 Msa1348230:intron 50.0%
GACATCCTTGATTGCTGCGT+GGG - tig0010244:56661-56680 Msa1348230:intron 50.0%
TCTTTCCCACGCAGCAATCA+AGG + tig0010244:56669-56688 None:intergenic 50.0%
GGCAAGGAAGAGGAATGAGA+AGG + tig0010244:58087-58106 None:intergenic 50.0%
GGAAAAGGCAGGCACAAAGA+TGG - tig0010244:58515-58534 Msa1348230:CDS 50.0%
! AACTGGTGGCATTTAGGGTG+GGG + tig0010244:58663-58682 None:intergenic 50.0%
CGATGCAAGAATCAGTCGTC+AGG - tig0010244:58986-59005 Msa1348230:intron 50.0%
GTAAACCTTTGGTCCATGGG+AGG + tig0010244:59141-59160 None:intergenic 50.0%
TTTACTCTCCTTGCTCGAGC+TGG - tig0010244:59156-59175 Msa1348230:intron 50.0%
ATCCTGTGTGTGATCCATCC+AGG - tig0010244:59407-59426 Msa1348230:CDS 50.0%
AACCTGGATGGATCACACAC+AGG + tig0010244:59412-59431 None:intergenic 50.0%
TGTGTGATCCATCCAGGTTC+AGG - tig0010244:59413-59432 Msa1348230:CDS 50.0%
ATGTACCTCCTGAACCTGGA+TGG + tig0010244:59424-59443 None:intergenic 50.0%
TCAGATGTACCTCCTGAACC+TGG + tig0010244:59428-59447 None:intergenic 50.0%
CGGTGGAGAAGAAGAGGAAG+AGG + tig0010244:52814-52833 None:intergenic 55.0%
CCAATTCGCGTTGTTGACGG+TGG + tig0010244:52831-52850 None:intergenic 55.0%
CCACCGTCAACAACGCGAAT+TGG - tig0010244:52828-52847 Msa1348230:three_prime_UTR 55.0%
! CATGGCACCGAAGGAACCTA+GGG + tig0010244:52892-52911 None:intergenic 55.0%
! ACATGGCACCGAAGGAACCT+AGG + tig0010244:52893-52912 None:intergenic 55.0%
! CAAGGTGGTGGTAACTTGCG+AGG + tig0010244:52996-53015 None:intergenic 55.0%
AGTTACCACCACCTTGCCAG+TGG - tig0010244:53000-53019 Msa1348230:CDS 55.0%
! TGACGATAGTGCCACTGGCA+AGG + tig0010244:53014-53033 None:intergenic 55.0%
GAGCAGTGTCCGTGCTTCAT+AGG - tig0010244:53647-53666 Msa1348230:intron 55.0%
AGCCCCGTGCATTCATGTCA+AGG - tig0010244:54000-54019 Msa1348230:intron 55.0%
GTTCATCTGCGCTTCCCTGA+CGG - tig0010244:54771-54790 Msa1348230:intron 55.0%
ATTGTATCCAGCCCCGGTAG+GGG + tig0010244:56328-56347 None:intergenic 55.0%
GTATTGTATCCAGCCCCGGT+AGG + tig0010244:56330-56349 None:intergenic 55.0%
AGATCCATCCCTTGGCCCAT+AGG - tig0010244:56433-56452 Msa1348230:intron 55.0%
GAAACCTATGGGCCAAGGGA+TGG + tig0010244:56440-56459 None:intergenic 55.0%
! TGGGTTGTTTGCAGGTTGGG+AGG + tig0010244:57909-57928 None:intergenic 55.0%
GTAGGGTGTAGGCAAGGAAG+AGG + tig0010244:58097-58116 None:intergenic 55.0%
GTGATCCATCCAGGTTCAGG+AGG - tig0010244:59416-59435 Msa1348230:CDS 55.0%
! GAGGAAGGACATGGCACCGA+AGG + tig0010244:52901-52920 None:intergenic 60.0%
! TAGTGCCACTGGCAAGGTGG+TGG + tig0010244:53008-53027 None:intergenic 60.0%
! CGATAGTGCCACTGGCAAGG+TGG + tig0010244:53011-53030 None:intergenic 60.0%
TCATAGGTGCCAACCCCCGT+TGG + tig0010244:53510-53529 None:intergenic 60.0%
GCACGGACACTGCTCGGATT+AGG + tig0010244:53642-53661 None:intergenic 60.0%
! ATGCTGGAGGCCTGCTGGTT+CGG - tig0010244:53938-53957 Msa1348230:intron 60.0%
AATGCACGGGGCTCAGCTGT+GGG + tig0010244:53993-54012 None:intergenic 60.0%
! CAGTCGCATCGATCCCCTAC+CGG - tig0010244:56312-56331 Msa1348230:intron 60.0%
! AGTCGCATCGATCCCCTACC+GGG - tig0010244:56313-56332 Msa1348230:intron 60.0%
! GGGTGGCATTTAGGGTGGGT+AGG - tig0010244:57784-57803 Msa1348230:CDS 60.0%
! TGGTGGCATTTAGGGTGGGG+AGG + tig0010244:58660-58679 None:intergenic 60.0%
!! TTGGTCCATGGGAGGTGCCT+GGG + tig0010244:59133-59152 None:intergenic 60.0%
!! TTTGGTCCATGGGAGGTGCC+TGG + tig0010244:59134-59153 None:intergenic 60.0%
AGGCACCTCCCATGGACCAA+AGG - tig0010244:59133-59152 Msa1348230:intron 60.0%
CCTGTCTTCCAGCTCGAGCA+AGG + tig0010244:59167-59186 None:intergenic 60.0%
CCTTGCTCGAGCTGGAAGAC+AGG - tig0010244:59164-59183 Msa1348230:intron 60.0%
ACGGGGCTCAGCTGTGGGAA+CGG + tig0010244:53988-54007 None:intergenic 65.0%
GAATGCACGGGGCTCAGCTG+TGG + tig0010244:53994-54013 None:intergenic 65.0%
! GTCGCATCGATCCCCTACCG+GGG - tig0010244:56314-56333 Msa1348230:intron 65.0%
GTCATCCCAGGCACCTCCCA+TGG - tig0010244:59125-59144 Msa1348230:intron 65.0%
CGGGGCTCAGCTGTGGGAAC+GGG + tig0010244:53987-54006 None:intergenic 70.0%
CATCGATCCCCTACCGGGGC+TGG - tig0010244:56318-56337 Msa1348230:intron 70.0%
Chromosome Type Strat End Strand Name
tig0010244 gene 52725 59766 52725 ID=Msa1348230;Name=Msa1348230
tig0010244 mRNA 52725 59766 52725 ID=Msa1348230-mRNA-1;Parent=Msa1348230;Name=Msa1348230-mRNA-1;_AED=0.01;_eAED=0.01;_QI=145|1|1|1|1|1|10|254|398
tig0010244 exon 52725 53062 52725 ID=Msa1348230-mRNA-1:exon:6305;Parent=Msa1348230-mRNA-1
tig0010244 exon 53306 53356 53306 ID=Msa1348230-mRNA-1:exon:6304;Parent=Msa1348230-mRNA-1
tig0010244 exon 53433 53511 53433 ID=Msa1348230-mRNA-1:exon:6303;Parent=Msa1348230-mRNA-1
tig0010244 exon 56117 56220 56117 ID=Msa1348230-mRNA-1:exon:6302;Parent=Msa1348230-mRNA-1
tig0010244 exon 56702 56783 56702 ID=Msa1348230-mRNA-1:exon:6301;Parent=Msa1348230-mRNA-1
tig0010244 exon 57490 57610 57490 ID=Msa1348230-mRNA-1:exon:6300;Parent=Msa1348230-mRNA-1
tig0010244 exon 57699 57858 57699 ID=Msa1348230-mRNA-1:exon:6299;Parent=Msa1348230-mRNA-1
tig0010244 exon 58227 58288 58227 ID=Msa1348230-mRNA-1:exon:6298;Parent=Msa1348230-mRNA-1
tig0010244 exon 58470 58629 58470 ID=Msa1348230-mRNA-1:exon:6297;Parent=Msa1348230-mRNA-1
tig0010244 exon 59328 59766 59328 ID=Msa1348230-mRNA-1:exon:6296;Parent=Msa1348230-mRNA-1
tig0010244 five_prime_UTR 59622 59766 59622 ID=Msa1348230-mRNA-1:five_prime_utr;Parent=Msa1348230-mRNA-1
tig0010244 CDS 59328 59621 59328 ID=Msa1348230-mRNA-1:cds;Parent=Msa1348230-mRNA-1
tig0010244 CDS 58470 58629 58470 ID=Msa1348230-mRNA-1:cds;Parent=Msa1348230-mRNA-1
tig0010244 CDS 58227 58288 58227 ID=Msa1348230-mRNA-1:cds;Parent=Msa1348230-mRNA-1
tig0010244 CDS 57699 57858 57699 ID=Msa1348230-mRNA-1:cds;Parent=Msa1348230-mRNA-1
tig0010244 CDS 57490 57610 57490 ID=Msa1348230-mRNA-1:cds;Parent=Msa1348230-mRNA-1
tig0010244 CDS 56702 56783 56702 ID=Msa1348230-mRNA-1:cds;Parent=Msa1348230-mRNA-1
tig0010244 CDS 56117 56220 56117 ID=Msa1348230-mRNA-1:cds;Parent=Msa1348230-mRNA-1
tig0010244 CDS 53433 53511 53433 ID=Msa1348230-mRNA-1:cds;Parent=Msa1348230-mRNA-1
tig0010244 CDS 53306 53356 53306 ID=Msa1348230-mRNA-1:cds;Parent=Msa1348230-mRNA-1
tig0010244 CDS 52979 53062 52979 ID=Msa1348230-mRNA-1:cds;Parent=Msa1348230-mRNA-1
tig0010244 three_prime_UTR 52725 52978 52725 ID=Msa1348230-mRNA-1:three_prime_utr;Parent=Msa1348230-mRNA-1
Gene Sequence

>Msa1348230

ATGGCTATCTTCTCTGCAACCCTAGGTTCCTTCGGTGCCATGTCCTTCCTCTCATCTTCACAATCACAACAACACGACCCTTCTTCTTCCTCAATCGTCAATCCTTTCAATTTCCCTAAATGCCCTCGCAAGTTACCACCACCTTGCCAGTGGCACTATCGTCATCATCACAATTCTAAAATCATGGTATCTAGTAGTAGTAGTAGTAACAATACTCATATTGATGAATTCGACAGTGGTCTTCTTCAACGCCCTTCTGCTCCCGACTCTTATGATGCTCTTCGTCAAGCCAGGAGATCGTCAGATTGGAAGGCTGCAAACGCATATAGAGACAGTGGACTCATTTACAATGGTAGGGTTGAGGGTTTTAATGCTGGAGGCCTGCTGGTTCGGTTTTACTCTATCATGGGCTTTCTCCCGTTCCCACAGCTGAGCCCCGTGCATTCATGTCAAGAACCAGATAAAACTATCCAAGAACTTGCAAGAGAGTTGATCGGTTCCATCTTATCAGTGAAGGTAATTATAGTAGACGAGGAGAAACGGAAATTGGTCTTATCTGAAAAGGAAGCTTCATGGTTTAAATATTCAAAACATATCAACATAGGGGACCTTTTTGAAGCAAGAGTCGGTTCTGTTGAGGACTATGGTGCTTTTGTTCATCTGCGCTTCCCTGACGGTCTTTATCACCTTACCGGACTAATACATATCTCAGAAGTGTCATGGGATCTAGTTCAAGATGTAAGAGACTTCTTAAGAGAAGGTGAAGAAGTGAGGGTCAAAGTTATCAGTATTGATACTGTAAAAATGAGGCTTACACTGTCAATAAAACAGCTAGAAGAAGATCCACTGCTAGAAACTCTGGACAAAGTAATACCTCAGGATGGTTCAGCTGTTCCTGATTCTTTCAGCAGTACTACTAGCAGTCGCATCGATCCCCTACCGGGGCTGGATACAATACTTGAAGAGCTATTGCAGGAAGATGGCATATACGATGCAAGAATCAGTCGTCAGGGGTTTGAAAAACGAGTGGTCTCACAAGACTTGCAGCTTTGGCTTTCTAATGCACCTCCCATGGACCAAAGGTTTACTCTCCTTGCTCGAGCTGGAAGACAGGTTCAGGAGGTACATCTGAAAACATCCCTTGACCAGGAAGGCATCAAAAAGGCAATACAACGAGTATTGGAGCGTGTTCCTTGA

Protein sequence

>Msa1348230

MAIFSATLGSFGAMSFLSSSQSQQHDPSSSSIVNPFNFPKCPRKLPPPCQWHYRHHHNSKIMVSSSSSSNNTHIDEFDSGLLQRPSAPDSYDALRQARRSSDWKAANAYRDSGLIYNGRVEGFNAGGLLVRFYSIMGFLPFPQLSPVHSCQEPDKTIQELARELIGSILSVKVIIVDEEKRKLVLSEKEASWFKYSKHINIGDLFEARVGSVEDYGAFVHLRFPDGLYHLTGLIHISEVSWDLVQDVRDFLREGEEVRVKVISIDTVKMRLTLSIKQLEEDPLLETLDKVIPQDGSAVPDSFSSTTSSRIDPLPGLDTILEELLQEDGIYDARISRQGFEKRVVSQDLQLWLSNAPPMDQRFTLLARAGRQVQEVHLKTSLDQEGIKKAIQRVLERVP*