AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0571780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0571780 MtrunA17_Chr8g0387181 97.771 628 14 0 1 628 1 628 0.0 1283
Msa0571780 MtrunA17_Chr8g0387141 74.843 636 112 6 1 628 1 596 0.0 943
Msa0571780 MtrunA17_Chr1g0186281 68.671 632 135 11 1 622 1 579 0.0 811
Msa0571780 MtrunA17_Chr1g0186261 68.038 632 142 9 1 622 1 582 0.0 809
Msa0571780 MtrunA17_Chr1g0186191 66.839 579 134 8 45 622 68 589 0.0 739
Msa0571780 MtrunA17_Chr8g0387161 85.427 199 29 0 430 628 99 297 1.13e-119 357
Msa0571780 MtrunA17_Chr8g0387161 75.758 99 24 0 249 347 1 99 2.18e-42 154
Msa0571780 MtrunA17_Chr6g0479271 57.714 350 86 6 175 522 7 296 4.24e-111 336
Msa0571780 MtrunA17_Chr6g0479271 78.378 37 8 0 592 628 292 328 4.45e-12 67.8
Msa0571780 MtrunA17_Chr7g0248041 37.076 383 180 9 234 609 243 571 4.07e-68 233
Msa0571780 MtrunA17_Chr7g0248041 57.377 61 26 0 60 120 1 61 3.29e-12 69.3
Msa0571780 MtrunA17_Chr8g0348691 52.000 175 80 3 425 595 76 250 5.42e-53 182
Msa0571780 MtrunA17_Chr6g0453251 69.048 126 32 2 1 119 1 126 6.85e-49 166
Msa0571780 MtrunA17_Chr5g0420461 48.182 220 45 5 309 527 19 170 6.25e-42 150
Msa0571780 MtrunA17_Chr5g0420461 75.610 41 10 0 588 628 157 197 6.35e-14 70.9
Msa0571780 MtrunA17_Chr7g0241681 38.012 171 98 2 424 588 193 361 6.44e-29 118
Msa0571780 MtrunA17_Chr3g0086341 39.891 183 95 6 423 593 147 326 8.30e-26 111
Msa0571780 MtrunA17_Chr7g0241661 30.387 181 118 2 414 588 175 353 4.66e-20 92.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0571780 AT4G11400.2 34.522 617 327 17 26 627 19 573 6.48e-98 311
Msa0571780 AT4G11400.1 34.522 617 327 17 26 627 19 573 6.48e-98 311
Msa0571780 AT2G46040.3 46.199 171 88 3 427 594 362 531 1.32e-39 153
Msa0571780 AT2G46040.3 26.603 312 198 7 35 336 47 337 3.73e-21 98.2
Msa0571780 AT2G46040.1 46.199 171 88 3 427 594 362 531 1.32e-39 153
Msa0571780 AT2G46040.1 26.603 312 198 7 35 336 47 337 3.73e-21 98.2
Msa0571780 AT2G46040.2 46.199 171 88 3 427 594 376 545 1.95e-39 153
Msa0571780 AT2G46040.2 26.603 312 198 7 35 336 61 351 4.11e-21 98.2
Msa0571780 AT5G04110.1 39.130 161 86 4 425 574 361 520 4.89e-27 116
Msa0571780 AT5G04110.3 39.130 161 86 4 425 574 361 520 4.89e-27 116
Msa0571780 AT5G04110.2 39.130 161 86 4 425 574 362 521 5.05e-27 116
Msa0571780 AT2G03470.1 34.896 192 102 6 423 599 121 304 1.56e-21 98.6
Msa0571780 AT2G03470.2 34.896 192 102 6 423 599 120 303 1.69e-21 98.2
Msa0571780 AT1G13880.3 35.359 181 103 4 423 593 127 303 2.12e-21 97.8
Msa0571780 AT1G13880.1 35.359 181 103 4 423 593 126 302 2.24e-21 97.8
Msa0571780 AT1G13880.2 35.359 181 103 4 423 593 136 312 2.71e-21 97.4
Msa0571780 AT1G26580.3 31.429 210 124 5 418 609 62 269 8.64e-21 95.9
Msa0571780 AT1G26580.2 31.429 210 124 5 418 609 128 335 1.44e-20 95.9
Msa0571780 AT1G26580.1 31.429 210 124 5 418 609 128 335 1.44e-20 95.9
Msa0571780 AT5G04110.4 37.241 145 79 4 425 558 361 504 2.53e-19 92.0

Find 159 sgRNAs with CRISPR-Local

Find 423 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCCTCCCATTTGTTATTT+TGG 0.062612 4_1:+74483708 None:intergenic
TCGGAGCACTTTCAAGTTTA+TGG 0.095722 4_1:-74479249 Msa0571780:three_prime_UTR
CAAGAGTGATGGTTATTTAT+TGG 0.189535 4_1:-74483741 Msa0571780:CDS
TCATTGGGGATTTGATAAAA+TGG 0.191990 4_1:-74480038 Msa0571780:CDS
TATCATCACCGTCAACATTT+TGG 0.205466 4_1:+74483684 None:intergenic
CCTTTAGATTTGAGCATAAA+AGG 0.207974 4_1:+74483831 None:intergenic
TTCTTCCTTGTGAAGGAAAA+AGG 0.229657 4_1:-74484073 Msa0571780:CDS
AGCTATAGGTCTTGATTATC+AGG 0.237722 4_1:-74484539 Msa0571780:five_prime_UTR
GATGATGACGAAGTTGAATT+TGG 0.250331 4_1:-74479797 Msa0571780:CDS
TTATACTCCTTCCACCTTGA+TGG 0.254585 4_1:+74483479 None:intergenic
AATTTGATCACAAATAAATA+AGG 0.271584 4_1:+74484350 None:intergenic
CTTTGCTGCAATTCATGTTC+TGG 0.273535 4_1:-74480526 Msa0571780:CDS
GTATACACAAAATTGATAAA+AGG 0.274115 4_1:+74484484 None:intergenic
TGATGAAGAAAAGAGATTTA+AGG 0.278264 4_1:-74479987 Msa0571780:CDS
TGCCTTGTTTCGAAAGTATC+TGG 0.279788 4_1:+74479910 None:intergenic
CACCTTGATGGTTCTGGTAA+TGG 0.297194 4_1:+74483491 None:intergenic
CGCTAACTGTGCACCCTTCA+AGG 0.311246 4_1:+74479382 None:intergenic
CACTCCAAGCAATCCATATA+TGG 0.312317 4_1:+74479734 None:intergenic
ACAAGATCTGTTTCGGTAGT+AGG 0.317915 4_1:+74480178 None:intergenic
TTTCTCTTCTCAGTTGCATC+TGG 0.327601 4_1:+74480391 None:intergenic
GTCTATTGGGTGCTCCTTGA+AGG 0.329665 4_1:-74479396 Msa0571780:three_prime_UTR
CTCTACTACAATTCTCCTTT+AGG 0.334096 4_1:+74484158 None:intergenic
CTTCTCAGTTGCATCTGGTT+TGG 0.334667 4_1:+74480396 None:intergenic
GAGAAAATCTGAGCCATCTA+TGG 0.335639 4_1:-74480338 Msa0571780:CDS
ATAATTCTCGCAAACGTAAA+CGG 0.342533 4_1:-74483583 Msa0571780:CDS
TCCTTCCACCTTGATGGTTC+TGG 0.342765 4_1:+74483485 None:intergenic
TTTCTGAGAGTGACTCTAAA+TGG 0.355739 4_1:-74480240 Msa0571780:CDS
TTCAGTGACGACGTCTGGTT+TGG 0.357587 4_1:+74480435 None:intergenic
AGCTATCAAGCATCCATATA+TGG 0.363115 4_1:-74479747 Msa0571780:CDS
CGTCTAGACGCGGAATTTCA+TGG 0.372286 4_1:-74484265 Msa0571780:CDS
CGTAAACGGGAATCGATATC+AGG 0.372781 4_1:-74483569 Msa0571780:CDS
AATGGTTAGGCACACAAGTA+TGG 0.373689 4_1:-74480222 Msa0571780:CDS
GAAGTTGAATTTGGATCTTT+TGG 0.375334 4_1:-74479788 Msa0571780:CDS
CATTGGGGATTTGATAAAAT+GGG 0.380212 4_1:-74480037 Msa0571780:CDS
GACATGATTATGTTGTAAAA+TGG 0.380277 4_1:-74479421 Msa0571780:three_prime_UTR
ATTGCACGGTTCAGTCAATA+TGG 0.388593 4_1:-74480491 Msa0571780:CDS
GGATTCTGTGATAATTGAAA+TGG 0.394907 4_1:-74484017 Msa0571780:CDS
GTTGTAAAATGGCAGTCTAT+TGG 0.401172 4_1:-74479410 Msa0571780:three_prime_UTR
TGATGTTACTTGATTCTAAC+GGG 0.404597 4_1:+74483789 None:intergenic
CGAAAATCATCATCCATAGA+TGG 0.407291 4_1:+74480325 None:intergenic
CTGCAATTCATGTTCTGGTA+AGG 0.408572 4_1:-74480521 Msa0571780:CDS
TAATTCTCGCAAACGTAAAC+GGG 0.414761 4_1:-74483582 Msa0571780:CDS
TATGAAGGGTTATGACCATT+TGG 0.426038 4_1:+74484508 None:intergenic
GCGGTTGTATTGTTGAGTAT+CGG 0.426228 4_1:-74484237 Msa0571780:CDS
TCTCCCAACAAGATCTGTTT+CGG 0.428135 4_1:+74480171 None:intergenic
TCTGGTAATGGTGGAGCTAC+AGG 0.429826 4_1:+74483503 None:intergenic
GTACCATCAACATATACAAA+AGG 0.430239 4_1:-74484394 Msa0571780:five_prime_UTR
CTAATTACCAAAATAACAAA+TGG 0.432389 4_1:-74483715 Msa0571780:CDS
GATTTCATATTGCTGAGAAC+AGG 0.435888 4_1:-74480096 Msa0571780:CDS
TTGTTCAGTTGCTGAGGGCA+AGG 0.439451 4_1:-74483439 Msa0571780:CDS
CCGGAACTTCCGCTTGGAAA+AGG 0.440137 4_1:+74480278 None:intergenic
GAAACTACACCAGTCCATTC+CGG 0.442162 4_1:+74480259 None:intergenic
TGGGAAGATGATCCACCATT+TGG 0.442630 4_1:+74483386 None:intergenic
CATATACAAAAGGGCTAGCT+AGG 0.447091 4_1:-74484384 Msa0571780:five_prime_UTR
TGGAACTTGGAAAGCCACTA+TGG 0.452805 4_1:-74479496 Msa0571780:three_prime_UTR
TCAAGGTGGAAGGAGTATAA+AGG 0.452997 4_1:-74483476 Msa0571780:CDS
TTGTAAAATGGCAGTCTATT+GGG 0.453539 4_1:-74479409 Msa0571780:three_prime_UTR
TATACACAAAATTGATAAAA+GGG 0.460354 4_1:+74484485 None:intergenic
CTACCGAAACAGATCTTGTT+GGG 0.462379 4_1:-74480174 Msa0571780:CDS
CGGTTGTATTGTTGAGTATC+GGG 0.464313 4_1:-74484236 Msa0571780:CDS
CGATATCAGGAATGGTGAAC+TGG 0.466029 4_1:-74483556 Msa0571780:CDS
AGTCAGACGTTCATGGCAAA+CGG 0.467323 4_1:-74484301 Msa0571780:exon
CAGCACTAATGAAAACCAAA+AGG 0.467703 4_1:+74479332 None:intergenic
GCATCCATATATGGATTGCT+TGG 0.469079 4_1:-74479738 Msa0571780:CDS
GTGGTTGATGCGTTGGAACT+TGG 0.469328 4_1:-74479509 Msa0571780:three_prime_UTR
CGGTGACAATAATGAAATGA+AGG 0.470812 4_1:+74484588 None:intergenic
CGGTATCGAGAAAAGGGTTG+TGG 0.472038 4_1:-74484039 Msa0571780:CDS
CAGCACAAATGCTGTCCAAA+AGG 0.476215 4_1:+74479288 None:intergenic
CGTGAAAAGCTTGTTTCTGT+AGG 0.477267 4_1:-74480304 Msa0571780:CDS
TCATCGCTGTCAACAGTCTT+CGG 0.477687 4_1:+74479815 None:intergenic
TCTCCGAGCATCACCGGCAT+TGG 0.482085 4_1:+74484124 None:intergenic
TATGATGCGGTATCGAGAAA+AGG 0.483215 4_1:-74484046 Msa0571780:CDS
GATTCTGTGATAATTGAAAT+GGG 0.484845 4_1:-74484016 Msa0571780:CDS
GTCAGACGTTCATGGCAAAC+GGG 0.485222 4_1:-74484300 Msa0571780:exon
GACGCGGAATTTCATGGAAA+CGG 0.489133 4_1:-74484259 Msa0571780:CDS
GAGAGTGACTCTAAATGGTT+AGG 0.492462 4_1:-74480235 Msa0571780:CDS
CAGCGAGATTTAACAGAGAC+AGG 0.494477 4_1:+74480550 None:intergenic
AAGTGTAGCTGCAACGTTCA+AGG 0.494639 4_1:-74480136 Msa0571780:CDS
TGTTCAGTTGCTGAGGGCAA+GGG 0.496056 4_1:-74483438 Msa0571780:CDS
GGAGTCAGAAATATGTCCTC+TGG 0.498373 4_1:-74480470 Msa0571780:CDS
ACTACCGAAACAGATCTTGT+TGG 0.499677 4_1:-74480175 Msa0571780:CDS
AACAGAGAGTCAGACGTTCA+TGG 0.503202 4_1:-74484308 Msa0571780:exon
AAGAGGAGTGGTTGATGCGT+TGG 0.510564 4_1:-74479516 Msa0571780:three_prime_UTR
AAATTGATAAAAGGGTATGA+AGG 0.511683 4_1:+74484493 None:intergenic
TCCATTCCGGAACTTCCGCT+TGG 0.513689 4_1:+74480272 None:intergenic
GTGAGGAAGTTTCACTTCGA+TGG 0.516591 4_1:-74480015 Msa0571780:CDS
TACCATCAACATATACAAAA+GGG 0.517904 4_1:-74484393 Msa0571780:five_prime_UTR
ATGCCGGTGATGCTCGGAGA+TGG 0.521994 4_1:-74484121 Msa0571780:CDS
GATTTAGAACATGTCCATAG+TGG 0.528201 4_1:+74479482 None:intergenic
TAATTACCAAAATAACAAAT+GGG 0.533109 4_1:-74483714 Msa0571780:CDS
ATGATGTTACTTGATTCTAA+CGG 0.535061 4_1:+74483788 None:intergenic
TATCAGGTAAATCTGCCAAA+TGG 0.535518 4_1:-74484523 Msa0571780:five_prime_UTR
TCTATTGGGTGCTCCTTGAA+GGG 0.537436 4_1:-74479395 Msa0571780:three_prime_UTR
TTGTTTCGAAAGTATCTGGA+TGG 0.538515 4_1:+74479914 None:intergenic
GGTGGAGCTACAGGATCAAA+CGG 0.540327 4_1:+74483512 None:intergenic
ATCTCAATTTCACTGTACCT+TGG 0.540348 4_1:+74480587 None:intergenic
CTCAGAGATTTCCACACAAG+AGG 0.541018 4_1:+74483613 None:intergenic
GCGGAAGTTCCGGAATGGAC+TGG 0.543878 4_1:-74480268 Msa0571780:CDS
AGGCCAATGCCGGTGATGCT+CGG 0.544289 4_1:-74484127 Msa0571780:CDS
TCAACTGTTCTTCCTTGTGA+AGG 0.544693 4_1:-74484080 Msa0571780:CDS
GGGATTTGATAAAATGGGTG+AGG 0.544818 4_1:-74480032 Msa0571780:CDS
TCACGGATGCCAAAACATGA+AGG 0.545005 4_1:+74483987 None:intergenic
TGCAATTCATGTTCTGGTAA+GGG 0.545401 4_1:-74480520 Msa0571780:CDS
GGACCATCTCCGAGCATCAC+CGG 0.548561 4_1:+74484118 None:intergenic
AAAATTCGGCAATGGTGTTG+AGG 0.550666 4_1:-74483648 Msa0571780:CDS
ATGATGCGGTATCGAGAAAA+GGG 0.552445 4_1:-74484045 Msa0571780:CDS
AATTGATAAAAGGGTATGAA+GGG 0.553178 4_1:+74484494 None:intergenic
ATAAATAACCATCACTCTTG+TGG 0.553747 4_1:+74483744 None:intergenic
TCAACCACTCCTCTTCTAGC+TGG 0.556029 4_1:+74479524 None:intergenic
GAAGGAGTATAAAGGAGGCC+AGG 0.557635 4_1:-74483468 Msa0571780:CDS
AGTTCTAAGAAATAGAATGA+AGG 0.557779 4_1:-74484857 Msa0571780:intron
AAGAAAGAACCAGCTAGAAG+AGG 0.560607 4_1:-74479533 Msa0571780:three_prime_UTR
TTGTGTGGAAATCTCTGAGA+AGG 0.561286 4_1:-74483609 Msa0571780:CDS
CACCATTACCAGAACCATCA+AGG 0.561316 4_1:-74483493 Msa0571780:CDS
GGTATCGAGAAAAGGGTTGT+GGG 0.561504 4_1:-74484038 Msa0571780:CDS
TGTTCTGTCTGTGAGAAAGC+AGG 0.562735 4_1:-74483414 Msa0571780:CDS
AGCACTAATGAAAACCAAAA+GGG 0.565460 4_1:+74479333 None:intergenic
TCCAAGCGGAAGTTCCGGAA+TGG 0.566498 4_1:-74480273 Msa0571780:CDS
AGGCATTGTGAGGCCAATGC+CGG 0.566829 4_1:-74484137 Msa0571780:CDS
GATGCATCCTGCCATGTATG+AGG 0.570606 4_1:-74480629 Msa0571780:CDS
TACCAAAATAACAAATGGGA+GGG 0.570891 4_1:-74483710 Msa0571780:CDS
CAGGAATGGTGAACTGGACA+CGG 0.572522 4_1:-74483550 Msa0571780:CDS
CTTGATGGTTCTGGTAATGG+TGG 0.573107 4_1:+74483494 None:intergenic
GTGACGGTGTTGGTACTAGC+TGG 0.575249 4_1:+74484673 None:intergenic
TTTGTTAACCACAAGAGTGA+TGG 0.575780 4_1:-74483752 Msa0571780:CDS
TGAAATTGAGATATAGTGAA+AGG 0.576187 4_1:-74480576 Msa0571780:CDS
ACATGATCCTCATACATGGC+AGG 0.576377 4_1:+74480622 None:intergenic
CTGTAAAACTATCGTTCAGT+CGG 0.581173 4_1:-74479268 Msa0571780:three_prime_UTR
GGTAAGGGAAATAAATTGCA+CGG 0.586625 4_1:-74480505 Msa0571780:CDS
AAATGGTGGATCATCTTCCC+AGG 0.587670 4_1:-74483384 Msa0571780:intron
ATCCAGATACTTTCGAAACA+AGG 0.591847 4_1:-74479912 Msa0571780:CDS
ATTCCGCGTCTAGACGATCA+AGG 0.593540 4_1:+74484272 None:intergenic
TTATCTAGCTGCCTCTTGTG+TGG 0.597731 4_1:-74483624 Msa0571780:CDS
ACGGGAATCGATATCAGGAA+TGG 0.603553 4_1:-74483564 Msa0571780:CDS
CTAAAGGAGAATTGTAGTAG+AGG 0.604171 4_1:-74484157 Msa0571780:CDS
AGCAACATGATCCTCATACA+TGG 0.604798 4_1:+74480618 None:intergenic
AAATGCTGTCCAAAAGGTGA+AGG 0.605978 4_1:+74479294 None:intergenic
ACCAGAACCATCAAGGTGGA+AGG 0.609801 4_1:-74483486 Msa0571780:CDS
TTACCAAAATAACAAATGGG+AGG 0.613410 4_1:-74483711 Msa0571780:CDS
GAGGGTGTCCAAAATGTTGA+CGG 0.617850 4_1:-74483692 Msa0571780:CDS
ATAATTGATTGTGACGGTGT+TGG 0.621424 4_1:+74484663 None:intergenic
TCAGCAAAACATTCGAAGAG+AGG 0.626443 4_1:-74483922 Msa0571780:CDS
GGTGACAATAATGAAATGAA+GGG 0.629204 4_1:+74484589 None:intergenic
AGAAAGCAGGCTGAACCAAA+TGG 0.632421 4_1:-74483401 Msa0571780:CDS
GAAACAGATCTTGTTGGGAG+AGG 0.634208 4_1:-74480169 Msa0571780:CDS
CTTGTTGGGAGAGGAAGACG+AGG 0.636192 4_1:-74480160 Msa0571780:CDS
AGAACCAGCTAGAAGAGGAG+TGG 0.649931 4_1:-74479528 Msa0571780:three_prime_UTR
AAGCAGGCTGAACCAAATGG+TGG 0.656382 4_1:-74483398 Msa0571780:CDS
AGAGATTTAAGGATGCAATG+AGG 0.659010 4_1:-74479976 Msa0571780:CDS
AAACAAGGCAAGAAAAGACA+TGG 0.666046 4_1:-74479897 Msa0571780:CDS
CATGTTGCTCTTAGTCACCA+AGG 0.670434 4_1:-74480604 Msa0571780:CDS
AGTTGATATAAATCAAGCAG+CGG 0.672214 4_1:+74484097 None:intergenic
AAATCCCCAATGATAAAACA+CGG 0.674548 4_1:+74480048 None:intergenic
TTTCCTTGATCGTCTAGACG+CGG 0.677317 4_1:-74484275 Msa0571780:CDS
AGGTGGAAGGAGTATAAAGG+AGG 0.679711 4_1:-74483473 Msa0571780:CDS
ATTGTAGTAGAGGCATTGTG+AGG 0.687619 4_1:-74484147 Msa0571780:CDS
GCGGAATTTCATGGAAACGG+CGG 0.700684 4_1:-74484256 Msa0571780:CDS
TTATTGATAATTGATTGTGA+CGG 0.709411 4_1:+74484657 None:intergenic
CATTACCAGAACCATCAAGG+TGG 0.750119 4_1:-74483490 Msa0571780:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTACAAATTTTATTTG+TGG - chr4_1:74484864-74484883 Msa0571780:five_prime_UTR 10.0%
!!! ATCAATTATCAATAATTTTC+AGG - chr4_1:74479418-74479437 Msa0571780:three_prime_UTR 15.0%
!! AACTAATACAATTACAAAAA+TGG + chr4_1:74479505-74479524 None:intergenic 15.0%
!! TATACACAAAATTGATAAAA+GGG + chr4_1:74479585-74479604 None:intergenic 15.0%
!! AATTTGATCACAAATAAATA+AGG + chr4_1:74479720-74479739 None:intergenic 15.0%
!!! TTTGTTTTGTCAAATTTTTT+CGG - chr4_1:74479882-74479901 Msa0571780:CDS 15.0%
!!! TTTTTCATAAACTAATTTCA+CGG + chr4_1:74480100-74480119 None:intergenic 15.0%
!! TAATTACCAAAATAACAAAT+GGG - chr4_1:74480353-74480372 Msa0571780:CDS 15.0%
!! AATCCTGTATAAAATAATTA+TGG + chr4_1:74480722-74480741 None:intergenic 15.0%
!!! AAAAATACCATATTTTTGTT+TGG - chr4_1:74481736-74481755 Msa0571780:intron 15.0%
!!! TTATTGATAATTGATTGTGA+CGG + chr4_1:74479413-74479432 None:intergenic 20.0%
!! TAATACAATTACAAAAATGG+CGG + chr4_1:74479502-74479521 None:intergenic 20.0%
!! GTATACACAAAATTGATAAA+AGG + chr4_1:74479586-74479605 None:intergenic 20.0%
!!! AATTCTTTTTCTAGATCTAT+CGG + chr4_1:74480210-74480229 None:intergenic 20.0%
!! CTAATTACCAAAATAACAAA+TGG - chr4_1:74480352-74480371 Msa0571780:CDS 20.0%
!!! ATGCCATAATTATTTTATAC+AGG - chr4_1:74480716-74480735 Msa0571780:intron 20.0%
!! TATGTAACCAAACAAAAATA+TGG + chr4_1:74481746-74481765 None:intergenic 20.0%
!! CTTGATTCTAAGTTATTTAT+AGG + chr4_1:74482070-74482089 None:intergenic 20.0%
!! ATAATAAATTAGTAATGTCC+AGG - chr4_1:74482160-74482179 Msa0571780:intron 20.0%
!! CATTAGACATTATTAATGAT+AGG + chr4_1:74482614-74482633 None:intergenic 20.0%
!! CATTAATAATGTCTAATGAT+AGG - chr4_1:74482616-74482635 Msa0571780:intron 20.0%
!! TCAAATCCTTCTAATAATTT+AGG - chr4_1:74482649-74482668 Msa0571780:intron 20.0%
!! CTATAACCTAAATTATTAGA+AGG + chr4_1:74482658-74482677 None:intergenic 20.0%
!! TTTATTTATCAAGTGTTATG+TGG - chr4_1:74483367-74483386 Msa0571780:intron 20.0%
!!! AAATTTTGGTGTAATATAGA+TGG - chr4_1:74484505-74484524 Msa0571780:five_prime_UTR 20.0%
!! TCATAAAAATTTTTGTTGGG+AGG - chr4_1:74479187-74479206 Msa0571780:three_prime_UTR 25.0%
!!! AGTTCTAAGAAATAGAATGA+AGG - chr4_1:74479210-74479229 Msa0571780:three_prime_UTR 25.0%
!!! TTGTATTAGTTTTCAGCTAT+AGG - chr4_1:74479514-74479533 Msa0571780:three_prime_UTR 25.0%
!! AATTGATAAAAGGGTATGAA+GGG + chr4_1:74479576-74479595 None:intergenic 25.0%
!! AAATTGATAAAAGGGTATGA+AGG + chr4_1:74479577-74479596 None:intergenic 25.0%
! TACCATCAACATATACAAAA+GGG - chr4_1:74479674-74479693 Msa0571780:three_prime_UTR 25.0%
!!! AATTTTTTCGGTTTACCTAA+AGG - chr4_1:74479894-74479913 Msa0571780:CDS 25.0%
! GATTCTGTGATAATTGAAAT+GGG - chr4_1:74480051-74480070 Msa0571780:CDS 25.0%
!! AAATATCTGAGTGATTTTGA+AGG - chr4_1:74480117-74480136 Msa0571780:CDS 25.0%
!! ATGATGTTACTTGATTCTAA+CGG + chr4_1:74480282-74480301 None:intergenic 25.0%
!!! ATTGATGATGACGAAAAATT+CGG - chr4_1:74480405-74480424 Msa0571780:CDS 25.0%
!! TTATACAGGATTTTACACAT+TGG - chr4_1:74480730-74480749 Msa0571780:intron 25.0%
!!! TAAGACAAGATTCCTTTTTT+AGG - chr4_1:74480951-74480970 Msa0571780:intron 25.0%
! TTAATCGATGAACCTAAAAA+AGG + chr4_1:74480966-74480985 None:intergenic 25.0%
! CATTGAATAATTAACGTATC+TGG + chr4_1:74481015-74481034 None:intergenic 25.0%
!! ACTTTTCTTATATATGAGAC+CGG - chr4_1:74481050-74481069 Msa0571780:intron 25.0%
! TCAACAAAAGAAAGATATCA+TGG - chr4_1:74481152-74481171 Msa0571780:intron 25.0%
!!! CACATTAATTGGTATTGATT+GGG + chr4_1:74481331-74481350 None:intergenic 25.0%
! AATATGAATCTCGATTCATT+GGG - chr4_1:74481376-74481395 Msa0571780:intron 25.0%
! TGAATCTGATTATGAATCAT+CGG + chr4_1:74481770-74481789 None:intergenic 25.0%
! CAAGATTTAAACTGTGAATT+CGG + chr4_1:74481818-74481837 None:intergenic 25.0%
!! AAGTTAAGTTCTAATGCAAA+AGG + chr4_1:74482012-74482031 None:intergenic 25.0%
!! AATTTAGGGTTACAAAAGTT+AGG + chr4_1:74482191-74482210 None:intergenic 25.0%
! GAACATGTTAACAAATAAAC+AGG + chr4_1:74482227-74482246 None:intergenic 25.0%
! TTAACATGTTCAACTTGATT+TGG - chr4_1:74482236-74482255 Msa0571780:intron 25.0%
! TAACATGTTCAACTTGATTT+GGG - chr4_1:74482237-74482256 Msa0571780:intron 25.0%
! AACTTAAAGACAAGTTCAAA+AGG + chr4_1:74482423-74482442 None:intergenic 25.0%
!!! TATGTTACTTTCTAAACTTC+TGG - chr4_1:74482464-74482483 Msa0571780:intron 25.0%
! TGTAGTCAATCATATCATAA+GGG + chr4_1:74482570-74482589 None:intergenic 25.0%
! ATGTAGTCAATCATATCATA+AGG + chr4_1:74482571-74482590 None:intergenic 25.0%
! TTATGATATGATTGACTACA+TGG - chr4_1:74482570-74482589 Msa0571780:intron 25.0%
!!! ATTTAGGTTATAGTTTTCCA+TGG - chr4_1:74482665-74482684 Msa0571780:intron 25.0%
! ATTGAATAGTTAGAGGTAAA+GGG + chr4_1:74482694-74482713 None:intergenic 25.0%
! AATTGAATAGTTAGAGGTAA+AGG + chr4_1:74482695-74482714 None:intergenic 25.0%
! TATTCAATTACCGTCTATAT+GGG - chr4_1:74482706-74482725 Msa0571780:intron 25.0%
!!! AATTCCATTAGTCACTTTTA+TGG - chr4_1:74483162-74483181 Msa0571780:intron 25.0%
! AAATCCATAAAAGTGACTAA+TGG + chr4_1:74483169-74483188 None:intergenic 25.0%
! TGATATCAAAACATTGAGAA+AGG - chr4_1:74483310-74483329 Msa0571780:intron 25.0%
! TGAAATTGAGATATAGTGAA+AGG - chr4_1:74483491-74483510 Msa0571780:CDS 25.0%
!! TTCTCTTTTCAGTAATATCT+GGG + chr4_1:74483714-74483733 None:intergenic 25.0%
!! TTTCTCTTTTCAGTAATATC+TGG + chr4_1:74483715-74483734 None:intergenic 25.0%
! TGATGAAGAAAAGAGATTTA+AGG - chr4_1:74484080-74484099 Msa0571780:CDS 25.0%
! GACATGATTATGTTGTAAAA+TGG - chr4_1:74484646-74484665 Msa0571780:five_prime_UTR 25.0%
!!! TTCAAGTTTATGGTTTTAGT+TGG - chr4_1:74484828-74484847 Msa0571780:intron 25.0%
!!! TTACAAATTTTATTTGTGGC+AGG - chr4_1:74484868-74484887 Msa0571780:five_prime_UTR 25.0%
ATAAAATCCCTATCTTCTCT+CGG + chr4_1:74479249-74479268 None:intergenic 30.0%
CGCGAAAATAAATGACTAAA+AGG + chr4_1:74479289-74479308 None:intergenic 30.0%
GGTGACAATAATGAAATGAA+GGG + chr4_1:74479481-74479500 None:intergenic 30.0%
GTACCATCAACATATACAAA+AGG - chr4_1:74479673-74479692 Msa0571780:three_prime_UTR 30.0%
! AGTTGATATAAATCAAGCAG+CGG + chr4_1:74479973-74479992 None:intergenic 30.0%
GGATTCTGTGATAATTGAAA+TGG - chr4_1:74480050-74480069 Msa0571780:CDS 30.0%
AAGAGAGGAGTTTGAAAAAT+GGG - chr4_1:74480160-74480179 Msa0571780:CDS 30.0%
AGTTTGAAAAATGGGAATCA+TGG - chr4_1:74480168-74480187 Msa0571780:CDS 30.0%
GTTTGAAAAATGGGAATCAT+GGG - chr4_1:74480169-74480188 Msa0571780:CDS 30.0%
CCTTTAGATTTGAGCATAAA+AGG + chr4_1:74480239-74480258 None:intergenic 30.0%
! CCTTTTATGCTCAAATCTAA+AGG - chr4_1:74480236-74480255 Msa0571780:CDS 30.0%
! TGATGTTACTTGATTCTAAC+GGG + chr4_1:74480281-74480300 None:intergenic 30.0%
ATAAATAACCATCACTCTTG+TGG + chr4_1:74480326-74480345 None:intergenic 30.0%
CAAGAGTGATGGTTATTTAT+TGG - chr4_1:74480326-74480345 Msa0571780:CDS 30.0%
TTACCAAAATAACAAATGGG+AGG - chr4_1:74480356-74480375 Msa0571780:CDS 30.0%
TACCAAAATAACAAATGGGA+GGG - chr4_1:74480357-74480376 Msa0571780:CDS 30.0%
ATAATTCTCGCAAACGTAAA+CGG - chr4_1:74480484-74480503 Msa0571780:CDS 30.0%
!!! ATTTTTTTGTTCAGTTGCTG+AGG - chr4_1:74480622-74480641 Msa0571780:CDS 30.0%
!!! TTTTTTTGTTCAGTTGCTGA+GGG - chr4_1:74480623-74480642 Msa0571780:CDS 30.0%
AAAAAGATAACTAGCCATTC+AGG + chr4_1:74480783-74480802 None:intergenic 30.0%
CAGAATTAAGTGCATTGTAA+TGG + chr4_1:74480822-74480841 None:intergenic 30.0%
!! AGATTTTGGAAAGAAACCAA+TGG + chr4_1:74480872-74480891 None:intergenic 30.0%
CAATAATAACATACTCCATC+CGG - chr4_1:74480919-74480938 Msa0571780:intron 30.0%
TCTTGTCTTATATATGAGAC+CGG + chr4_1:74480941-74480960 None:intergenic 30.0%
! TTCTCACTTGTTGATAAAGA+TGG + chr4_1:74481197-74481216 None:intergenic 30.0%
!! GCACATTAATTGGTATTGAT+TGG + chr4_1:74481332-74481351 None:intergenic 30.0%
ACATAGATAGGCACATTAAT+TGG + chr4_1:74481342-74481361 None:intergenic 30.0%
ATTAATGTGCCTATCTATGT+TGG - chr4_1:74481342-74481361 Msa0571780:intron 30.0%
CAATATGAATCTCGATTCAT+TGG - chr4_1:74481375-74481394 Msa0571780:intron 30.0%
AATGTGAATCGTGTGATTTA+GGG + chr4_1:74481515-74481534 None:intergenic 30.0%
TAATGTGAATCGTGTGATTT+AGG + chr4_1:74481516-74481535 None:intergenic 30.0%
TGATTCAAACCTGGATTATT+TGG + chr4_1:74481632-74481651 None:intergenic 30.0%
CCAAGAAGAAGAAAAAAATG+GGG + chr4_1:74481694-74481713 None:intergenic 30.0%
GCCAAGAAGAAGAAAAAAAT+GGG + chr4_1:74481695-74481714 None:intergenic 30.0%
AGCCAAGAAGAAGAAAAAAA+TGG + chr4_1:74481696-74481715 None:intergenic 30.0%
ATCAGATTCAATTCACAATC+TGG - chr4_1:74481780-74481799 Msa0571780:intron 30.0%
TCAGATTCAATTCACAATCT+GGG - chr4_1:74481781-74481800 Msa0571780:intron 30.0%
TTGGAGTAAACTCAATAACA+TGG + chr4_1:74481850-74481869 None:intergenic 30.0%
TTAGAACTTAACTTAGAGTC+AGG - chr4_1:74482018-74482037 Msa0571780:intron 30.0%
TAGAACTTAACTTAGAGTCA+GGG - chr4_1:74482019-74482038 Msa0571780:intron 30.0%
AGAATCAAGTATGTATCACA+AGG - chr4_1:74482081-74482100 Msa0571780:intron 30.0%
AAAAGTTTATCTCTCTCTGA+GGG + chr4_1:74482307-74482326 None:intergenic 30.0%
TAAAAGTTTATCTCTCTCTG+AGG + chr4_1:74482308-74482327 None:intergenic 30.0%
ATTGACTACATGGAAAACAA+TGG - chr4_1:74482580-74482599 Msa0571780:intron 30.0%
CTATTCAATTACCGTCTATA+TGG - chr4_1:74482705-74482724 Msa0571780:intron 30.0%
!! CAGTAAAAGCATTAGTAAGA+AGG + chr4_1:74482737-74482756 None:intergenic 30.0%
! CTTCTTACTAATGCTTTTAC+TGG - chr4_1:74482735-74482754 Msa0571780:intron 30.0%
AATTGGTACAATCTTTCCTT+AGG + chr4_1:74482785-74482804 None:intergenic 30.0%
AACATCTATCATGCAGAAAT+TGG + chr4_1:74482802-74482821 None:intergenic 30.0%
! AAAGCATTAGGGAGAAAATT+GGG + chr4_1:74482828-74482847 None:intergenic 30.0%
!! CCTTAGAAATGAAAGCATTA+GGG + chr4_1:74482839-74482858 None:intergenic 30.0%
CCTAATGCTTTCATTTCTAA+GGG - chr4_1:74482837-74482856 Msa0571780:intron 30.0%
!! ATCAATTTTGCTATGCTTTG+TGG - chr4_1:74482871-74482890 Msa0571780:intron 30.0%
!! TGAAATCTGTTGTTTCAAAG+TGG - chr4_1:74482933-74482952 Msa0571780:intron 30.0%
GCATAGTCAACTTAAAATTC+TGG - chr4_1:74482960-74482979 Msa0571780:intron 30.0%
TATGGATTTGTATAAAGCAC+AGG - chr4_1:74483180-74483199 Msa0571780:intron 30.0%
ATTTGTATAAAGCACAGGAA+AGG - chr4_1:74483185-74483204 Msa0571780:intron 30.0%
ATTCAATGAAGAACCTATTG+AGG + chr4_1:74483270-74483289 None:intergenic 30.0%
!!! GGTTTTGAATCATCTTTAAC+AGG + chr4_1:74483871-74483890 None:intergenic 30.0%
AAATCCCCAATGATAAAACA+CGG + chr4_1:74484022-74484041 None:intergenic 30.0%
TCATTGGGGATTTGATAAAA+TGG - chr4_1:74484029-74484048 Msa0571780:CDS 30.0%
CATTGGGGATTTGATAAAAT+GGG - chr4_1:74484030-74484049 Msa0571780:CDS 30.0%
!! GTTCCAAAAAGACTTGTTTT+GGG + chr4_1:74484130-74484149 None:intergenic 30.0%
!! TGTTCCAAAAAGACTTGTTT+TGG + chr4_1:74484131-74484150 None:intergenic 30.0%
! GAAGTTGAATTTGGATCTTT+TGG - chr4_1:74484279-74484298 Msa0571780:CDS 30.0%
! CATTTTCTCAAACCTCAAAA+TGG + chr4_1:74484411-74484430 None:intergenic 30.0%
ACCAAAATTTCCTAGTGAAA+GGG + chr4_1:74484495-74484514 None:intergenic 30.0%
TTGTAAAATGGCAGTCTATT+GGG - chr4_1:74484658-74484677 Msa0571780:five_prime_UTR 30.0%
AACCAAAAGGGAAAAAAGAA+GGG + chr4_1:74484725-74484744 None:intergenic 30.0%
AAACCAAAAGGGAAAAAAGA+AGG + chr4_1:74484726-74484745 None:intergenic 30.0%
AGCACTAATGAAAACCAAAA+GGG + chr4_1:74484737-74484756 None:intergenic 30.0%
TAAAATCCCTATCTTCTCTC+GGG + chr4_1:74479248-74479267 None:intergenic 35.0%
!! ATTTATTTTCGCGCTGTGTT+AGG - chr4_1:74479296-74479315 Msa0571780:three_prime_UTR 35.0%
! CTGATTTTCAATGCTGCAAA+TGG + chr4_1:74479372-74479391 None:intergenic 35.0%
ATAATTGATTGTGACGGTGT+TGG + chr4_1:74479407-74479426 None:intergenic 35.0%
CGGTGACAATAATGAAATGA+AGG + chr4_1:74479482-74479501 None:intergenic 35.0%
AGCTATAGGTCTTGATTATC+AGG - chr4_1:74479528-74479547 Msa0571780:three_prime_UTR 35.0%
TATCAGGTAAATCTGCCAAA+TGG - chr4_1:74479544-74479563 Msa0571780:three_prime_UTR 35.0%
TATGAAGGGTTATGACCATT+TGG + chr4_1:74479562-74479581 None:intergenic 35.0%
! AGCCCTTTTGTATATGTTGA+TGG + chr4_1:74479679-74479698 None:intergenic 35.0%
CTCTACTACAATTCTCCTTT+AGG + chr4_1:74479912-74479931 None:intergenic 35.0%
CTAAAGGAGAATTGTAGTAG+AGG - chr4_1:74479910-74479929 Msa0571780:CDS 35.0%
TTCTTCCTTGTGAAGGAAAA+AGG - chr4_1:74479994-74480013 Msa0571780:CDS 35.0%
!! GGGTTTTAACCTTCATGTTT+TGG - chr4_1:74480071-74480090 Msa0571780:CDS 35.0%
!! ATCTGAGTGATTTTGAAGGT+TGG - chr4_1:74480121-74480140 Msa0571780:CDS 35.0%
GAAGAGAGGAGTTTGAAAAA+TGG - chr4_1:74480159-74480178 Msa0571780:CDS 35.0%
TTTGTTAACCACAAGAGTGA+TGG - chr4_1:74480315-74480334 Msa0571780:CDS 35.0%
! TATCATCACCGTCAACATTT+TGG + chr4_1:74480386-74480405 None:intergenic 35.0%
TAATTCTCGCAAACGTAAAC+GGG - chr4_1:74480485-74480504 Msa0571780:CDS 35.0%
GCAACTGAACAAAAAAATCC+TGG + chr4_1:74480620-74480639 None:intergenic 35.0%
AATATGTACTCACAAGCCAT+TGG - chr4_1:74480853-74480872 Msa0571780:intron 35.0%
TTTCTTATATATGAGACCGG+AGG - chr4_1:74481053-74481072 Msa0571780:intron 35.0%
TTCTTATATATGAGACCGGA+GGG - chr4_1:74481054-74481073 Msa0571780:intron 35.0%
TAGAGTTGTAACTATGAGAG+CGG + chr4_1:74481121-74481140 None:intergenic 35.0%
!! TTTCTTTTGTTGAAGTGCCT+AGG + chr4_1:74481145-74481164 None:intergenic 35.0%
CATGTATTCTACTGAAAACC+AGG + chr4_1:74481274-74481293 None:intergenic 35.0%
AATCTGAATCATGCAACTTC+GGG + chr4_1:74481425-74481444 None:intergenic 35.0%
GAATCTGAATCATGCAACTT+CGG + chr4_1:74481426-74481445 None:intergenic 35.0%
ATGTGAATCGTGTGATTTAG+GGG + chr4_1:74481514-74481533 None:intergenic 35.0%
TCACGTATTCCAAATAATCC+AGG - chr4_1:74481620-74481639 Msa0571780:intron 35.0%
TCTTCAATGTGATTCAAACC+TGG + chr4_1:74481641-74481660 None:intergenic 35.0%
AGAAGAAAAAAATGGGGAGA+CGG + chr4_1:74481688-74481707 None:intergenic 35.0%
!!! CCCCATTTTTTTCTTCTTCT+TGG - chr4_1:74481691-74481710 Msa0571780:intron 35.0%
CAATTCACAATCTGGGAAAT+AGG - chr4_1:74481788-74481807 Msa0571780:intron 35.0%
AAGTAGCCTTTACACTCATA+AGG - chr4_1:74481940-74481959 Msa0571780:intron 35.0%
GCTTTACCTTATGAGTGTAA+AGG + chr4_1:74481949-74481968 None:intergenic 35.0%
AGAACTTAACTTAGAGTCAG+GGG - chr4_1:74482020-74482039 Msa0571780:intron 35.0%
AAGTATGTATCACAAGGTGT+GGG - chr4_1:74482087-74482106 Msa0571780:intron 35.0%
! GTTTTCACTTGAACTTGTAC+AGG + chr4_1:74482117-74482136 None:intergenic 35.0%
TACAAGTTCAAGTGAAAACG+AGG - chr4_1:74482118-74482137 Msa0571780:intron 35.0%
ACAAGTTCAAGTGAAAACGA+GGG - chr4_1:74482119-74482138 Msa0571780:intron 35.0%
TACAAAAGTTAGGTAGAACC+TGG + chr4_1:74482181-74482200 None:intergenic 35.0%
GTCAACTGCAGTTCAATTTA+GGG + chr4_1:74482205-74482224 None:intergenic 35.0%
TAACATAACCAGAGAAGCAA+AGG + chr4_1:74482451-74482470 None:intergenic 35.0%
TCATATCATAAGGGTGGTAT+TGG + chr4_1:74482561-74482580 None:intergenic 35.0%
AGTCAATCATATCATAAGGG+TGG + chr4_1:74482567-74482586 None:intergenic 35.0%
GACGGTAATTGAATAGTTAG+AGG + chr4_1:74482701-74482720 None:intergenic 35.0%
ACACATGAAAAAACCACCTA+AGG - chr4_1:74482766-74482785 Msa0571780:intron 35.0%
AAGCATTAGGGAGAAAATTG+GGG + chr4_1:74482827-74482846 None:intergenic 35.0%
!! GAAAGCATTAGGGAGAAAAT+TGG + chr4_1:74482829-74482848 None:intergenic 35.0%
CCCTAATGCTTTCATTTCTA+AGG - chr4_1:74482836-74482855 Msa0571780:intron 35.0%
!! CCCTTAGAAATGAAAGCATT+AGG + chr4_1:74482840-74482859 None:intergenic 35.0%
GCTATGCTTTGTGGAAAATA+TGG - chr4_1:74482880-74482899 Msa0571780:intron 35.0%
AGACGTTGCATTTACTAGAT+TGG + chr4_1:74483037-74483056 None:intergenic 35.0%
ATCTAGTAAATGCAACGTCT+AGG - chr4_1:74483037-74483056 Msa0571780:intron 35.0%
TCTAGTAAATGCAACGTCTA+GGG - chr4_1:74483038-74483057 Msa0571780:intron 35.0%
ATTGAGGATAGGGAATTACA+AGG + chr4_1:74483254-74483273 None:intergenic 35.0%
TGTAATTCCCTATCCTCAAT+AGG - chr4_1:74483254-74483273 Msa0571780:intron 35.0%
TGAAGAACCTATTGAGGATA+GGG + chr4_1:74483264-74483283 None:intergenic 35.0%
ATGAAGAACCTATTGAGGAT+AGG + chr4_1:74483265-74483284 None:intergenic 35.0%
ATCTCAATTTCACTGTACCT+TGG + chr4_1:74483483-74483502 None:intergenic 35.0%
TGCAATTCATGTTCTGGTAA+GGG - chr4_1:74483547-74483566 Msa0571780:CDS 35.0%
GGTAAGGGAAATAAATTGCA+CGG - chr4_1:74483562-74483581 Msa0571780:CDS 35.0%
! CTTTTCAGTAATATCTGGGT+TGG + chr4_1:74483710-74483729 None:intergenic 35.0%
CGAAAATCATCATCCATAGA+TGG + chr4_1:74483745-74483764 None:intergenic 35.0%
! TTTCTGAGAGTGACTCTAAA+TGG - chr4_1:74483827-74483846 Msa0571780:CDS 35.0%
GATTTCATATTGCTGAGAAC+AGG - chr4_1:74483971-74483990 Msa0571780:CDS 35.0%
! TGCATTCCGTGTTTTATCAT+TGG - chr4_1:74484013-74484032 Msa0571780:CDS 35.0%
! GCATTCCGTGTTTTATCATT+GGG - chr4_1:74484014-74484033 Msa0571780:CDS 35.0%
! CATTCCGTGTTTTATCATTG+GGG - chr4_1:74484015-74484034 Msa0571780:CDS 35.0%
AGAGATTTAAGGATGCAATG+AGG - chr4_1:74484091-74484110 Msa0571780:CDS 35.0%
!!! AAAAAGACTTGTTTTGGGAG+GGG + chr4_1:74484125-74484144 None:intergenic 35.0%
!!! CAAAAAGACTTGTTTTGGGA+GGG + chr4_1:74484126-74484145 None:intergenic 35.0%
!! TTGTTTCGAAAGTATCTGGA+TGG + chr4_1:74484156-74484175 None:intergenic 35.0%
ATCCAGATACTTTCGAAACA+AGG - chr4_1:74484155-74484174 Msa0571780:CDS 35.0%
! GATGATGACGAAGTTGAATT+TGG - chr4_1:74484270-74484289 Msa0571780:CDS 35.0%
! GAATTTGGATCTTTTGGTGA+TGG - chr4_1:74484285-74484304 Msa0571780:CDS 35.0%
!!! GATCTTTTGGTGATGGTTTT+GGG - chr4_1:74484292-74484311 Msa0571780:CDS 35.0%
AGCTATCAAGCATCCATATA+TGG - chr4_1:74484320-74484339 Msa0571780:five_prime_UTR 35.0%
GGTTTGAGAAAATGTCTTCT+TGG - chr4_1:74484417-74484436 Msa0571780:five_prime_UTR 35.0%
TTTCTACTTTCTCCTTATGC+AGG - chr4_1:74484462-74484481 Msa0571780:five_prime_UTR 35.0%
! TCCCTTTCACTAGGAAATTT+TGG - chr4_1:74484491-74484510 Msa0571780:five_prime_UTR 35.0%
CACCAAAATTTCCTAGTGAA+AGG + chr4_1:74484496-74484515 None:intergenic 35.0%
! GATTTAGAACATGTCCATAG+TGG + chr4_1:74484588-74484607 None:intergenic 35.0%
GTTGTAAAATGGCAGTCTAT+TGG - chr4_1:74484657-74484676 Msa0571780:five_prime_UTR 35.0%
ACCAAAAGGGAAAAAAGAAG+GGG + chr4_1:74484724-74484743 None:intergenic 35.0%
CAGCACTAATGAAAACCAAA+AGG + chr4_1:74484738-74484757 None:intergenic 35.0%
!!! TCGTTTTTTCCTTCACCTTT+TGG - chr4_1:74484764-74484783 Msa0571780:intron 35.0%
CTGTAAAACTATCGTTCAGT+CGG - chr4_1:74484799-74484818 Msa0571780:intron 35.0%
!! CATATACAAAAGGGCTAGCT+AGG - chr4_1:74479683-74479702 Msa0571780:exon 40.0%
GCGGTTGTATTGTTGAGTAT+CGG - chr4_1:74479830-74479849 Msa0571780:CDS 40.0%
CGGTTGTATTGTTGAGTATC+GGG - chr4_1:74479831-74479850 Msa0571780:CDS 40.0%
!! ATTGTAGTAGAGGCATTGTG+AGG - chr4_1:74479920-74479939 Msa0571780:CDS 40.0%
TCAACTGTTCTTCCTTGTGA+AGG - chr4_1:74479987-74480006 Msa0571780:CDS 40.0%
TTCCTTGTGAAGGAAAAAGG+TGG - chr4_1:74479997-74480016 Msa0571780:CDS 40.0%
TCCTTGTGAAGGAAAAAGGT+GGG - chr4_1:74479998-74480017 Msa0571780:CDS 40.0%
! TATGATGCGGTATCGAGAAA+AGG - chr4_1:74480021-74480040 Msa0571780:CDS 40.0%
! ATGATGCGGTATCGAGAAAA+GGG - chr4_1:74480022-74480041 Msa0571780:CDS 40.0%
TCAGCAAAACATTCGAAGAG+AGG - chr4_1:74480145-74480164 Msa0571780:CDS 40.0%
!!! CACCCTCCCATTTGTTATTT+TGG + chr4_1:74480362-74480381 None:intergenic 40.0%
GATGACGAAAAATTCGGCAA+TGG - chr4_1:74480411-74480430 Msa0571780:CDS 40.0%
! AAAATTCGGCAATGGTGTTG+AGG - chr4_1:74480419-74480438 Msa0571780:CDS 40.0%
! TTGTGTGGAAATCTCTGAGA+AGG - chr4_1:74480458-74480477 Msa0571780:CDS 40.0%
TTATACTCCTTCCACCTTGA+TGG + chr4_1:74480591-74480610 None:intergenic 40.0%
! TCAAGGTGGAAGGAGTATAA+AGG - chr4_1:74480591-74480610 Msa0571780:CDS 40.0%
TTCCATATCCTGAACCTGAA+TGG - chr4_1:74480766-74480785 Msa0571780:intron 40.0%
! ATAACTAGCCATTCAGGTTC+AGG + chr4_1:74480777-74480796 None:intergenic 40.0%
! CAGTTAGCAAGCTGAGATTT+TGG + chr4_1:74480886-74480905 None:intergenic 40.0%
GTCTTATATATGAGACCGGA+TGG + chr4_1:74480937-74480956 None:intergenic 40.0%
CTACAGGAATTGGATAGCTT+TGG - chr4_1:74481078-74481097 Msa0571780:intron 40.0%
CATAGTTACAACTCTAGCCT+AGG - chr4_1:74481125-74481144 Msa0571780:intron 40.0%
!! AGTGCAGTTACAGTTCTGAA+TGG + chr4_1:74481245-74481264 None:intergenic 40.0%
TGTGCCTATCTATGTTGGAT+AGG - chr4_1:74481347-74481366 Msa0571780:intron 40.0%
GTGCCTATCTATGTTGGATA+GGG - chr4_1:74481348-74481367 Msa0571780:intron 40.0%
GATCCCTATCCAACATAGAT+AGG + chr4_1:74481354-74481373 None:intergenic 40.0%
ATCTGAATCATGCAACTTCG+GGG + chr4_1:74481424-74481443 None:intergenic 40.0%
TGTGAATCGTGTGATTTAGG+GGG + chr4_1:74481513-74481532 None:intergenic 40.0%
TTACAAACCAGTTTGCATGC+TGG + chr4_1:74481543-74481562 None:intergenic 40.0%
! ATGTAAAGGCACACTCTCTT+TGG + chr4_1:74481869-74481888 None:intergenic 40.0%
! GAGAGTGTGCCTTTACATAA+TGG - chr4_1:74481871-74481890 Msa0571780:intron 40.0%
GCAAACTCGCCATTATGTAA+AGG + chr4_1:74481883-74481902 None:intergenic 40.0%
ATCCTATCCTAATCCTGCAA+TGG - chr4_1:74481980-74481999 Msa0571780:intron 40.0%
TTAACTTAGAGTCAGGGGAA+TGG - chr4_1:74482025-74482044 Msa0571780:intron 40.0%
CAAGTATGTATCACAAGGTG+TGG - chr4_1:74482086-74482105 Msa0571780:intron 40.0%
GGTCAACTGCAGTTCAATTT+AGG + chr4_1:74482206-74482225 None:intergenic 40.0%
! GTTTTATGCCTTTGCTTCTC+TGG - chr4_1:74482440-74482459 Msa0571780:intron 40.0%
!! ATCATAAGGGTGGTATTGGT+GGG + chr4_1:74482557-74482576 None:intergenic 40.0%
! TATCATAAGGGTGGTATTGG+TGG + chr4_1:74482558-74482577 None:intergenic 40.0%
GAAGGTTAGACCCATATAGA+CGG + chr4_1:74482719-74482738 None:intergenic 40.0%
TGGTACAATCTTTCCTTAGG+TGG + chr4_1:74482782-74482801 None:intergenic 40.0%
GACAACGACATTATCATCAC+AGG + chr4_1:74483004-74483023 None:intergenic 40.0%
CTAGTAAATGCAACGTCTAG+GGG - chr4_1:74483039-74483058 Msa0571780:intron 40.0%
TGACCATTCTGATATGCACT+GGG - chr4_1:74483212-74483231 Msa0571780:intron 40.0%
GCATATGTATGCTTTGCAGA+AGG - chr4_1:74483411-74483430 Msa0571780:CDS 40.0%
AGCAACATGATCCTCATACA+TGG + chr4_1:74483452-74483471 None:intergenic 40.0%
CTTTGCTGCAATTCATGTTC+TGG - chr4_1:74483541-74483560 Msa0571780:CDS 40.0%
CTGCAATTCATGTTCTGGTA+AGG - chr4_1:74483546-74483565 Msa0571780:CDS 40.0%
ATTGCACGGTTCAGTCAATA+TGG - chr4_1:74483576-74483595 Msa0571780:CDS 40.0%
TTTCTCTTCTCAGTTGCATC+TGG + chr4_1:74483679-74483698 None:intergenic 40.0%
GAGAAAATCTGAGCCATCTA+TGG - chr4_1:74483729-74483748 Msa0571780:CDS 40.0%
!! CGTGAAAAGCTTGTTTCTGT+AGG - chr4_1:74483763-74483782 Msa0571780:CDS 40.0%
GAGAGTGACTCTAAATGGTT+AGG - chr4_1:74483832-74483851 Msa0571780:CDS 40.0%
AATGGTTAGGCACACAAGTA+TGG - chr4_1:74483845-74483864 Msa0571780:CDS 40.0%
ACAAGATCTGTTTCGGTAGT+AGG + chr4_1:74483892-74483911 None:intergenic 40.0%
ACTACCGAAACAGATCTTGT+TGG - chr4_1:74483892-74483911 Msa0571780:CDS 40.0%
CTACCGAAACAGATCTTGTT+GGG - chr4_1:74483893-74483912 Msa0571780:CDS 40.0%
TCTCCCAACAAGATCTGTTT+CGG + chr4_1:74483899-74483918 None:intergenic 40.0%
GGGATTTGATAAAATGGGTG+AGG - chr4_1:74484035-74484054 Msa0571780:CDS 40.0%
!!! CCAAAAAGACTTGTTTTGGG+AGG + chr4_1:74484127-74484146 None:intergenic 40.0%
! CCTCCCAAAACAAGTCTTTT+TGG - chr4_1:74484124-74484143 Msa0571780:CDS 40.0%
!! TGCCTTGTTTCGAAAGTATC+TGG + chr4_1:74484160-74484179 None:intergenic 40.0%
!!! GGATCTTTTGGTGATGGTTT+TGG - chr4_1:74484291-74484310 Msa0571780:CDS 40.0%
!!! TTTTGGTGATGGTTTTGGGA+GGG - chr4_1:74484296-74484315 Msa0571780:exon 40.0%
! GCATCCATATATGGATTGCT+TGG - chr4_1:74484329-74484348 Msa0571780:five_prime_UTR 40.0%
CACTCCAAGCAATCCATATA+TGG + chr4_1:74484336-74484355 None:intergenic 40.0%
!! AAGTGCGATAAGCCATTTTG+AGG - chr4_1:74484396-74484415 Msa0571780:five_prime_UTR 40.0%
AAGAAAGAACCAGCTAGAAG+AGG - chr4_1:74484534-74484553 Msa0571780:five_prime_UTR 40.0%
AAAAGGGAAAAAAGAAGGGG+GGG + chr4_1:74484721-74484740 None:intergenic 40.0%
CAAAAGGGAAAAAAGAAGGG+GGG + chr4_1:74484722-74484741 None:intergenic 40.0%
CCAAAAGGGAAAAAAGAAGG+GGG + chr4_1:74484723-74484742 None:intergenic 40.0%
AAATGCTGTCCAAAAGGTGA+AGG + chr4_1:74484776-74484795 None:intergenic 40.0%
!! TCGGAGCACTTTCAAGTTTA+TGG - chr4_1:74484818-74484837 Msa0571780:intron 40.0%
AACAGAGAGTCAGACGTTCA+TGG - chr4_1:74479759-74479778 Msa0571780:CDS 45.0%
AGTCAGACGTTCATGGCAAA+CGG - chr4_1:74479766-74479785 Msa0571780:CDS 45.0%
TTTCCTTGATCGTCTAGACG+CGG - chr4_1:74479792-74479811 Msa0571780:CDS 45.0%
GACGCGGAATTTCATGGAAA+CGG - chr4_1:74479808-74479827 Msa0571780:CDS 45.0%
! ACCCACCTTTTTCCTTCACA+AGG + chr4_1:74480002-74480021 None:intergenic 45.0%
GGAAAAAGGTGGGTATGATG+CGG - chr4_1:74480008-74480027 Msa0571780:CDS 45.0%
! GGTATCGAGAAAAGGGTTGT+GGG - chr4_1:74480029-74480048 Msa0571780:CDS 45.0%
TCACGGATGCCAAAACATGA+AGG + chr4_1:74480083-74480102 None:intergenic 45.0%
!! GAGGGTGTCCAAAATGTTGA+CGG - chr4_1:74480375-74480394 Msa0571780:CDS 45.0%
TTATCTAGCTGCCTCTTGTG+TGG - chr4_1:74480443-74480462 Msa0571780:CDS 45.0%
CTCAGAGATTTCCACACAAG+AGG + chr4_1:74480457-74480476 None:intergenic 45.0%
CGTAAACGGGAATCGATATC+AGG - chr4_1:74480498-74480517 Msa0571780:CDS 45.0%
ACGGGAATCGATATCAGGAA+TGG - chr4_1:74480503-74480522 Msa0571780:CDS 45.0%
CGATATCAGGAATGGTGAAC+TGG - chr4_1:74480511-74480530 Msa0571780:CDS 45.0%
!! CTTGATGGTTCTGGTAATGG+TGG + chr4_1:74480576-74480595 None:intergenic 45.0%
CACCATTACCAGAACCATCA+AGG - chr4_1:74480574-74480593 Msa0571780:CDS 45.0%
!! CACCTTGATGGTTCTGGTAA+TGG + chr4_1:74480579-74480598 None:intergenic 45.0%
CATTACCAGAACCATCAAGG+TGG - chr4_1:74480577-74480596 Msa0571780:CDS 45.0%
! AGGTGGAAGGAGTATAAAGG+AGG - chr4_1:74480594-74480613 Msa0571780:CDS 45.0%
TGTTCTGTCTGTGAGAAAGC+AGG - chr4_1:74480653-74480672 Msa0571780:intron 45.0%
AGAAAGCAGGCTGAACCAAA+TGG - chr4_1:74480666-74480685 Msa0571780:intron 45.0%
TGGGAAGATGATCCACCATT+TGG + chr4_1:74480684-74480703 None:intergenic 45.0%
!! AAATGGTGGATCATCTTCCC+AGG - chr4_1:74480683-74480702 Msa0571780:intron 45.0%
! ATGGCATCGAGAGTATACCT+GGG + chr4_1:74480703-74480722 None:intergenic 45.0%
! TATGGCATCGAGAGTATACC+TGG + chr4_1:74480704-74480723 None:intergenic 45.0%
! AGCCATTCAGGTTCAGGATA+TGG + chr4_1:74480771-74480790 None:intergenic 45.0%
!! CTCAGCTTGCTAACTGCTAA+AGG - chr4_1:74480890-74480909 Msa0571780:intron 45.0%
!! GAGCGGTCATTTTGTAGACT+GGG + chr4_1:74481104-74481123 None:intergenic 45.0%
!! AGAGCGGTCATTTTGTAGAC+TGG + chr4_1:74481105-74481124 None:intergenic 45.0%
TGTAACTGCACTATTGAGCC+TGG - chr4_1:74481253-74481272 Msa0571780:intron 45.0%
GCATGATTCAGATTCTGCTG+CGG - chr4_1:74481431-74481450 Msa0571780:intron 45.0%
CATGATTCAGATTCTGCTGC+GGG - chr4_1:74481432-74481451 Msa0571780:intron 45.0%
GTGAATCGTGTGATTTAGGG+GGG + chr4_1:74481512-74481531 None:intergenic 45.0%
TTATGCTCCAGCATGCAAAC+TGG - chr4_1:74481533-74481552 Msa0571780:intron 45.0%
TTTGCTCCCTTGTTAACTCG+TGG - chr4_1:74481898-74481917 Msa0571780:intron 45.0%
CACCATTGCAGGATTAGGAT+AGG + chr4_1:74481985-74482004 None:intergenic 45.0%
GTTCACACCATTGCAGGATT+AGG + chr4_1:74481990-74482009 None:intergenic 45.0%
CAAAAGGTTCACACCATTGC+AGG + chr4_1:74481996-74482015 None:intergenic 45.0%
TTAGAGTCAGGGGAATGGAA+GGG - chr4_1:74482030-74482049 Msa0571780:intron 45.0%
AGTGAAAACGAGGGCTGATT+TGG - chr4_1:74482128-74482147 Msa0571780:intron 45.0%
TTAGAGGTAAAGGGAGACCA+TGG + chr4_1:74482685-74482704 None:intergenic 45.0%
TCAAGCAACTTGACTCTGTG+AGG + chr4_1:74483095-74483114 None:intergenic 45.0%
GTGACCATTCTGATATGCAC+TGG - chr4_1:74483211-74483230 Msa0571780:intron 45.0%
TGACCCAGTGCATATCAGAA+TGG + chr4_1:74483218-74483237 None:intergenic 45.0%
ACATGATCCTCATACATGGC+AGG + chr4_1:74483448-74483467 None:intergenic 45.0%
CATGTTGCTCTTAGTCACCA+AGG - chr4_1:74483463-74483482 Msa0571780:CDS 45.0%
CAGCGAGATTTAACAGAGAC+AGG + chr4_1:74483520-74483539 None:intergenic 45.0%
GGAGTCAGAAATATGTCCTC+TGG - chr4_1:74483597-74483616 Msa0571780:CDS 45.0%
!!! TTGGCTGTTGTTTTCTCCAG+AGG + chr4_1:74483616-74483635 None:intergenic 45.0%
! TTCTTTTCAGTGACGACGTC+TGG + chr4_1:74483640-74483659 None:intergenic 45.0%
CTTCTCAGTTGCATCTGGTT+TGG + chr4_1:74483674-74483693 None:intergenic 45.0%
! TGTAGGTCACCTTTTCCAAG+CGG - chr4_1:74483780-74483799 Msa0571780:CDS 45.0%
GAAACTACACCAGTCCATTC+CGG + chr4_1:74483811-74483830 None:intergenic 45.0%
GAAACAGATCTTGTTGGGAG+AGG - chr4_1:74483898-74483917 Msa0571780:CDS 45.0%
AAGTGTAGCTGCAACGTTCA+AGG - chr4_1:74483931-74483950 Msa0571780:CDS 45.0%
GTGAGGAAGTTTCACTTCGA+TGG - chr4_1:74484052-74484071 Msa0571780:CDS 45.0%
TCATCGCTGTCAACAGTCTT+CGG + chr4_1:74484255-74484274 None:intergenic 45.0%
!!! CTTTTGGTGATGGTTTTGGG+AGG - chr4_1:74484295-74484314 Msa0571780:exon 45.0%
AAGGGATGCATTCCTGCATA+AGG + chr4_1:74484477-74484496 None:intergenic 45.0%
AGGAATGCATCCCTTTCACT+AGG - chr4_1:74484482-74484501 Msa0571780:five_prime_UTR 45.0%
TGGAACTTGGAAAGCCACTA+TGG - chr4_1:74484571-74484590 Msa0571780:five_prime_UTR 45.0%
TCTATTGGGTGCTCCTTGAA+GGG - chr4_1:74484672-74484691 Msa0571780:five_prime_UTR 45.0%
!!! CCCCCTTCTTTTTTCCCTTT+TGG - chr4_1:74484720-74484739 Msa0571780:intron 45.0%
CAGCACAAATGCTGTCCAAA+AGG + chr4_1:74484782-74484801 None:intergenic 45.0%
AAGCAGCCCGAGAGAAGATA+GGG - chr4_1:74479239-74479258 Msa0571780:three_prime_UTR 50.0%
GTCAGACGTTCATGGCAAAC+GGG - chr4_1:74479767-74479786 Msa0571780:CDS 50.0%
ATTCCGCGTCTAGACGATCA+AGG + chr4_1:74479798-74479817 None:intergenic 50.0%
CGTCTAGACGCGGAATTTCA+TGG - chr4_1:74479802-74479821 Msa0571780:CDS 50.0%
GCGGAATTTCATGGAAACGG+CGG - chr4_1:74479811-74479830 Msa0571780:CDS 50.0%
! CGGTATCGAGAAAAGGGTTG+TGG - chr4_1:74480028-74480047 Msa0571780:CDS 50.0%
CAGGAATGGTGAACTGGACA+CGG - chr4_1:74480517-74480536 Msa0571780:CDS 50.0%
GGTGGAGCTACAGGATCAAA+CGG + chr4_1:74480558-74480577 None:intergenic 50.0%
!! TCTGGTAATGGTGGAGCTAC+AGG + chr4_1:74480567-74480586 None:intergenic 50.0%
ACCAGAACCATCAAGGTGGA+AGG - chr4_1:74480581-74480600 Msa0571780:CDS 50.0%
! TCCTTCCACCTTGATGGTTC+TGG + chr4_1:74480585-74480604 None:intergenic 50.0%
! GAAGGAGTATAAAGGAGGCC+AGG - chr4_1:74480599-74480618 Msa0571780:CDS 50.0%
TTGTTCAGTTGCTGAGGGCA+AGG - chr4_1:74480628-74480647 Msa0571780:CDS 50.0%
TGTTCAGTTGCTGAGGGCAA+GGG - chr4_1:74480629-74480648 Msa0571780:CDS 50.0%
AAGCAGGCTGAACCAAATGG+TGG - chr4_1:74480669-74480688 Msa0571780:intron 50.0%
TCCAATTCCTGTAGTCCCTC+CGG + chr4_1:74481072-74481091 None:intergenic 50.0%
GCGCAACCTTGAAATGGACA+GGG - chr4_1:74481454-74481473 Msa0571780:intron 50.0%
!!! TGACAGCCGTTTTAGTTGGG+CGG + chr4_1:74481480-74481499 None:intergenic 50.0%
!!! CCCTGACAGCCGTTTTAGTT+GGG + chr4_1:74481483-74481502 None:intergenic 50.0%
CCCAACTAAAACGGCTGTCA+GGG - chr4_1:74481480-74481499 Msa0571780:intron 50.0%
!! ACCCTGACAGCCGTTTTAGT+TGG + chr4_1:74481484-74481503 None:intergenic 50.0%
CCGTGACCACGAGTTAACAA+GGG + chr4_1:74481907-74481926 None:intergenic 50.0%
CCCTTGTTAACTCGTGGTCA+CGG - chr4_1:74481904-74481923 Msa0571780:intron 50.0%
CCTTGTTAACTCGTGGTCAC+GGG - chr4_1:74481905-74481924 Msa0571780:intron 50.0%
CTTAGAGTCAGGGGAATGGA+AGG - chr4_1:74482029-74482048 Msa0571780:intron 50.0%
GGTGGGTACACATGGCATTA+CGG + chr4_1:74482540-74482559 None:intergenic 50.0%
!! GTGGTATTGGTGGGTACACA+TGG + chr4_1:74482548-74482567 None:intergenic 50.0%
GATGCATCCTGCCATGTATG+AGG - chr4_1:74483438-74483457 Msa0571780:CDS 50.0%
TTCAGTGACGACGTCTGGTT+TGG + chr4_1:74483635-74483654 None:intergenic 50.0%
! CCTTTTCCAAGCGGAAGTTC+CGG - chr4_1:74483789-74483808 Msa0571780:CDS 50.0%
AGAACCAGCTAGAAGAGGAG+TGG - chr4_1:74484539-74484558 Msa0571780:five_prime_UTR 50.0%
TCAACCACTCCTCTTCTAGC+TGG + chr4_1:74484546-74484565 None:intergenic 50.0%
! AAGAGGAGTGGTTGATGCGT+TGG - chr4_1:74484551-74484570 Msa0571780:five_prime_UTR 50.0%
! GTGGTTGATGCGTTGGAACT+TGG - chr4_1:74484558-74484577 Msa0571780:five_prime_UTR 50.0%
GTCTATTGGGTGCTCCTTGA+AGG - chr4_1:74484671-74484690 Msa0571780:five_prime_UTR 50.0%
GAAGCAGCCCGAGAGAAGAT+AGG - chr4_1:74479238-74479257 Msa0571780:three_prime_UTR 55.0%
!! GTGACGGTGTTGGTACTAGC+TGG + chr4_1:74479397-74479416 None:intergenic 55.0%
! AGGCATTGTGAGGCCAATGC+CGG - chr4_1:74479930-74479949 Msa0571780:CDS 55.0%
TATGAGACCGGAGGGACTAC+AGG - chr4_1:74481062-74481081 Msa0571780:intron 55.0%
ACCGGAGGGACTACAGGAAT+TGG - chr4_1:74481068-74481087 Msa0571780:intron 55.0%
GGCGCAACCTTGAAATGGAC+AGG - chr4_1:74481453-74481472 Msa0571780:intron 55.0%
ACAGGGCCGCCCAACTAAAA+CGG - chr4_1:74481471-74481490 Msa0571780:intron 55.0%
GCCCAACTAAAACGGCTGTC+AGG - chr4_1:74481479-74481498 Msa0571780:intron 55.0%
CCCGTGACCACGAGTTAACA+AGG + chr4_1:74481908-74481927 None:intergenic 55.0%
TGCAACGTCTAGGGGAAGAG+TGG - chr4_1:74483047-74483066 Msa0571780:intron 55.0%
CCGGAACTTCCGCTTGGAAA+AGG + chr4_1:74483792-74483811 None:intergenic 55.0%
TCCAAGCGGAAGTTCCGGAA+TGG - chr4_1:74483794-74483813 Msa0571780:CDS 55.0%
TCCATTCCGGAACTTCCGCT+TGG + chr4_1:74483798-74483817 None:intergenic 55.0%
CTTGTTGGGAGAGGAAGACG+AGG - chr4_1:74483907-74483926 Msa0571780:CDS 55.0%
CGCTAACTGTGCACCCTTCA+AGG + chr4_1:74484688-74484707 None:intergenic 55.0%
AGGCCAATGCCGGTGATGCT+CGG - chr4_1:74479940-74479959 Msa0571780:CDS 60.0%
TCTCCGAGCATCACCGGCAT+TGG + chr4_1:74479946-74479965 None:intergenic 60.0%
ATGCCGGTGATGCTCGGAGA+TGG - chr4_1:74479946-74479965 Msa0571780:CDS 60.0%
GGACCATCTCCGAGCATCAC+CGG + chr4_1:74479952-74479971 None:intergenic 60.0%
CTGCGGGCGCAACCTTGAAA+TGG - chr4_1:74481448-74481467 Msa0571780:intron 60.0%
GCGGAAGTTCCGGAATGGAC+TGG - chr4_1:74483799-74483818 Msa0571780:CDS 60.0%
GGGCGGCCCTGTCCATTTCA+AGG + chr4_1:74481463-74481482 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 74479185 74484904 74479185 ID=Msa0571780;Name=Msa0571780
chr4_1 mRNA 74479185 74484904 74479185 ID=Msa0571780-mRNA-1;Parent=Msa0571780;Name=Msa0571780-mRNA-1;_AED=0.05;_eAED=0.05;_QI=446|1|1|1|0.33|0.25|4|409|628
chr4_1 exon 74479185 74479565 74479185 ID=Msa0571780-mRNA-1:exon:25677;Parent=Msa0571780-mRNA-1
chr4_1 exon 74479672 74480659 74479672 ID=Msa0571780-mRNA-1:exon:25676;Parent=Msa0571780-mRNA-1
chr4_1 exon 74483385 74484710 74483385 ID=Msa0571780-mRNA-1:exon:25675;Parent=Msa0571780-mRNA-1
chr4_1 exon 74484858 74484904 74484858 ID=Msa0571780-mRNA-1:exon:25674;Parent=Msa0571780-mRNA-1
chr4_1 five_prime_UTR 74484858 74484904 74484858 ID=Msa0571780-mRNA-1:five_prime_utr;Parent=Msa0571780-mRNA-1
chr4_1 five_prime_UTR 74484312 74484710 74484312 ID=Msa0571780-mRNA-1:five_prime_utr;Parent=Msa0571780-mRNA-1
chr4_1 CDS 74483385 74484311 74483385 ID=Msa0571780-mRNA-1:cds;Parent=Msa0571780-mRNA-1
chr4_1 CDS 74479700 74480659 74479700 ID=Msa0571780-mRNA-1:cds;Parent=Msa0571780-mRNA-1
chr4_1 three_prime_UTR 74479672 74479699 74479672 ID=Msa0571780-mRNA-1:three_prime_utr;Parent=Msa0571780-mRNA-1
chr4_1 three_prime_UTR 74479185 74479565 74479185 ID=Msa0571780-mRNA-1:three_prime_utr;Parent=Msa0571780-mRNA-1
Gene Sequence

>Msa0571780

ATGGCAAACGGGTCTTTCCTTGATCGTCTAGACGCGGAATTTCATGGAAACGGCGGTTGTATTGTTGAGTATCGGGCTGATCGTGACAAAGCTAAACAGAAATCTTTGTTTTGTCAAATTTTTTCGGTTTACCTAAAGGAGAATTGTAGTAGAGGCATTGTGAGGCCAATGCCGGTGATGCTCGGAGATGGTCCGCTGCTTGATTTATATCAACTGTTCTTCCTTGTGAAGGAAAAAGGTGGGTATGATGCGGTATCGAGAAAAGGGTTGTGGGATTCTGTGATAATTGAAATGGGTTTTAACCTTCATGTTTTGGCATCCGTGAAATTAGTTTATGAAAAATATCTGAGTGATTTTGAAGGTTGGCTCAGCAAAACATTCGAAGAGAGGAGTTTGAAAAATGGGAATCATGGGTATTTGAATTCATTGCCGATAGATCTAGAAAAAGAATTTCGAAGCCTTTTATGCTCAAATCTAAAGGACAACGATGATGATTTTGTCCCGTTAGAATCAAGTAACATCATAAAGCGCATTGAATTTGTTAACCACAAGAGTGATGGTTATTTATTGGACACTAATTACCAAAATAACAAATGGGAGGGTGTCCAAAATGTTGACGGTGATGATATTGATGATGACGAAAAATTCGGCAATGGTGTTGAGGATTATCTAGCTGCCTCTTGTGTGGAAATCTCTGAGAAGGAATATAATTCTCGCAAACGTAAACGGGAATCGATATCAGGAATGGTGAACTGGACACGGCATATCGCAAAACATCCGTTTGATCCTGTAGCTCCACCATTACCAGAACCATCAAGGTGGAAGGAGTATAAAGGAGGCCAGGATTTTTTTGTTCAGTTGCTGAGGGCAAGGGATGTTCTGTCTGTGAGAAAGCAGGCTGAACCAAATGGTGGATCATCTTCCCAGAAGGTGAAGATGCATCCTGCCATGTATGAGGATCATGTTGCTCTTAGTCACCAAGGTACAGTGAAATTGAGATATAGTGAAAGGCTTCCTGTCTCTGTTAAATCTCGCTGTCTTTGCTGCAATTCATGTTCTGGTAAGGGAAATAAATTGCACGGTTCAGTCAATATGGAGTCAGAAATATGTCCTCTGGAGAAAACAACAGCCAAACCAGACGTCGTCACTGAAAAGAAAAAATCAACTGCCAAACCAGATGCAACTGAGAAGAGAAAATCAACTGCCAACCCAGATATTACTGAAAAGAGAAAATCTGAGCCATCTATGGATGATGATTTTCGTGAAAAGCTTGTTTCTGTAGGTCACCTTTTCCAAGCGGAAGTTCCGGAATGGACTGGTGTAGTTTCTGAGAGTGACTCTAAATGGTTAGGCACACAAGTATGGCCTGTTAAAGATGATTCAAAACCTACTACCGAAACAGATCTTGTTGGGAGAGGAAGACGAGGAAAGTGTAGCTGCAACGTTCAAGGTTCTGTTGACTGTGTCAGATTTCATATTGCTGAGAACAGGATGAAGCTGAAGCTTGAATTGCATTCCGTGTTTTATCATTGGGGATTTGATAAAATGGGTGAGGAAGTTTCACTTCGATGGACAGCTGATGAAGAAAAGAGATTTAAGGATGCAATGAGGTTAAAATTCCCCTCCCAAAACAAGTCTTTTTGGAACAATCCATCCAGATACTTTCGAAACAAGGCAAGAAAAGACATGGTGAGCTATTACTTCAATGTATATCTTATTCAACTAAGAAGCTATCAGAATCGAGTGACTCCGAAGACTGTTGACAGCGATGATGACGAAGTTGAATTTGGATCTTTTGGTGATGGTTTTGGGAGGGAAGCTATCAAGCATCCATATATGGATTGCTTGGAGTGTTCAGAGAACAAGCAATGCTTTGACTTTGAGTAG
Protein sequence

>Msa0571780

MANGSFLDRLDAEFHGNGGCIVEYRADRDKAKQKSLFCQIFSVYLKENCSRGIVRPMPVMLGDGPLLDLYQLFFLVKEKGGYDAVSRKGLWDSVIIEMGFNLHVLASVKLVYEKYLSDFEGWLSKTFEERSLKNGNHGYLNSLPIDLEKEFRSLLCSNLKDNDDDFVPLESSNIIKRIEFVNHKSDGYLLDTNYQNNKWEGVQNVDGDDIDDDEKFGNGVEDYLAASCVEISEKEYNSRKRKRESISGMVNWTRHIAKHPFDPVAPPLPEPSRWKEYKGGQDFFVQLLRARDVLSVRKQAEPNGGSSSQKVKMHPAMYEDHVALSHQGTVKLRYSERLPVSVKSRCLCCNSCSGKGNKLHGSVNMESEICPLEKTTAKPDVVTEKKKSTAKPDATEKRKSTANPDITEKRKSEPSMDDDFREKLVSVGHLFQAEVPEWTGVVSESDSKWLGTQVWPVKDDSKPTTETDLVGRGRRGKCSCNVQGSVDCVRFHIAENRMKLKLELHSVFYHWGFDKMGEEVSLRWTADEEKRFKDAMRLKFPSQNKSFWNNPSRYFRNKARKDMVSYYFNVYLIQLRSYQNRVTPKTVDSDDDEVEFGSFGDGFGREAIKHPYMDCLECSENKQCFDFE*