Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0034350 | XP_024639920.1 | 95.844 | 770 | 32 | 0 | 1 | 770 | 1 | 770 | 0.0 | 1527 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0034350 | sp|Q9SWG3|FAR1_ARATH | 33.333 | 651 | 399 | 11 | 33 | 664 | 48 | 682 | 6.67e-114 | 367 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0034350 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002560 | Msa0034350 | 0.814809 | 1.275341e-51 | -8.615850e-47 |
| Msa0003220 | Msa0034350 | 0.813549 | 2.419418e-51 | -8.615850e-47 |
| Msa0010770 | Msa0034350 | 0.809675 | 1.682841e-50 | -8.615850e-47 |
| Msa0022550 | Msa0034350 | 0.805396 | 1.362059e-49 | -8.615850e-47 |
| Msa0023330 | Msa0034350 | 0.829594 | 4.717906e-55 | -8.615850e-47 |
| Msa0026910 | Msa0034350 | 0.815151 | 1.070582e-51 | -8.615850e-47 |
| Msa0027390 | Msa0034350 | 0.801056 | 1.077751e-48 | -8.615850e-47 |
| Msa0029850 | Msa0034350 | 0.812093 | 5.041495e-51 | -8.615850e-47 |
| Msa0031180 | Msa0034350 | 0.842223 | 2.949136e-58 | -8.615850e-47 |
| Msa0032470 | Msa0034350 | 0.810470 | 1.134573e-50 | -8.615850e-47 |
| Msa0034350 | Msa0036140 | 0.805000 | 1.648837e-49 | -8.615850e-47 |
| Msa0034350 | Msa0037120 | 0.822915 | 1.834910e-53 | -8.615850e-47 |
| Msa0034350 | Msa0042550 | 0.803480 | 3.417162e-49 | -8.615850e-47 |
| Msa0034350 | Msa0043500 | 0.805082 | 1.585090e-49 | -8.615850e-47 |
| Msa0034350 | Msa0045340 | 0.809573 | 1.769734e-50 | -8.615850e-47 |
| Msa0034350 | Msa0054820 | 0.850878 | 1.277353e-60 | -8.615850e-47 |
| Msa0034350 | Msa0055660 | 0.811600 | 6.457299e-51 | -8.615850e-47 |
| Msa0034350 | Msa0056450 | 0.807170 | 5.760979e-50 | -8.615850e-47 |
| Msa0034350 | Msa0058600 | 0.814490 | 1.500313e-51 | -8.615850e-47 |
| Msa0034350 | Msa0064110 | 0.804992 | 1.654847e-49 | -8.615850e-47 |
| Msa0034350 | Msa0064920 | 0.808795 | 2.598764e-50 | -8.615850e-47 |
| Msa0034350 | Msa0072720 | 0.809929 | 1.483617e-50 | -8.615850e-47 |
| Msa0034350 | Msa0077180 | 0.808247 | 3.401881e-50 | -8.615850e-47 |
| Msa0034350 | Msa0078480 | 0.848380 | 6.359303e-60 | -8.615850e-47 |
| Msa0034350 | Msa0082440 | 0.823487 | 1.348953e-53 | -8.615850e-47 |
| Msa0034350 | Msa0083090 | 0.803834 | 2.885671e-49 | -8.615850e-47 |
| Msa0034350 | Msa0084080 | 0.800996 | 1.108856e-48 | -8.615850e-47 |
| Msa0034350 | Msa0084340 | 0.816319 | 5.880199e-52 | -8.615850e-47 |
| Msa0034350 | Msa0085370 | 0.804825 | 1.793779e-49 | -8.615850e-47 |
| Msa0034350 | Msa0092440 | 0.815551 | 8.726487e-52 | -8.615850e-47 |
| Msa0034350 | Msa0095560 | 0.812845 | 3.453366e-51 | -8.615850e-47 |
| Msa0034350 | Msa0096580 | 0.818316 | 2.088536e-52 | -8.615850e-47 |
| Msa0034350 | Msa0099650 | 0.805165 | 1.522854e-49 | -8.615850e-47 |
| Msa0034350 | Msa0100160 | 0.848543 | 5.733824e-60 | -8.615850e-47 |
| Msa0034350 | Msa0115880 | 0.809369 | 1.957773e-50 | -8.615850e-47 |
| Msa0034350 | Msa0116080 | 0.822600 | 2.172256e-53 | -8.615850e-47 |
| Msa0034350 | Msa0123300 | 0.826466 | 2.670761e-54 | -8.615850e-47 |
| Msa0034350 | Msa0126230 | 0.827587 | 1.440690e-54 | -8.615850e-47 |
| Msa0034350 | Msa0131290 | 0.809534 | 1.804464e-50 | -8.615850e-47 |
| Msa0034350 | Msa0143850 | 0.837595 | 4.737249e-57 | -8.615850e-47 |
| Msa0034350 | Msa0144790 | 0.814352 | 1.609963e-51 | -8.615850e-47 |
| Msa0034350 | Msa0152400 | 0.804184 | 2.440314e-49 | -8.615850e-47 |
| Msa0034350 | Msa0159770 | 0.810644 | 1.040592e-50 | -8.615850e-47 |
| Msa0034350 | Msa0169820 | 0.801075 | 1.068208e-48 | -8.615850e-47 |
| Msa0034350 | Msa0171870 | 0.809273 | 2.052542e-50 | -8.615850e-47 |
| Msa0034350 | Msa0177170 | 0.807598 | 4.674053e-50 | -8.615850e-47 |
| Msa0034350 | Msa0178510 | 0.814805 | 1.277519e-51 | -8.615850e-47 |
| Msa0034350 | Msa0178570 | 0.800634 | 1.314845e-48 | -8.615850e-47 |
| Msa0034350 | Msa0183050 | 0.811189 | 7.928724e-51 | -8.615850e-47 |
| Msa0034350 | Msa0183420 | 0.805999 | 1.017911e-49 | -8.615850e-47 |
| Msa0034350 | Msa0186950 | 0.814032 | 1.894325e-51 | -8.615850e-47 |
| Msa0034350 | Msa0202730 | 0.807920 | 3.993813e-50 | -8.615850e-47 |
| Msa0034350 | Msa0205340 | 0.814003 | 1.922401e-51 | -8.615850e-47 |
| Msa0034350 | Msa0212990 | 0.820449 | 6.820540e-53 | -8.615850e-47 |
| Msa0034350 | Msa0213040 | 0.805763 | 1.141101e-49 | -8.615850e-47 |
| Msa0034350 | Msa0213520 | 0.815890 | 7.332272e-52 | -8.615850e-47 |
| Msa0034350 | Msa0218350 | 0.829592 | 4.721235e-55 | -8.615850e-47 |
| Msa0034350 | Msa0225220 | 0.810086 | 1.373060e-50 | -8.615850e-47 |
| Msa0034350 | Msa0227190 | 0.830757 | 2.452752e-55 | -8.615850e-47 |
| Msa0034350 | Msa0227230 | 0.809438 | 1.891899e-50 | -8.615850e-47 |
| Msa0034350 | Msa0230680 | 0.817586 | 3.054087e-52 | -8.615850e-47 |
| Msa0034350 | Msa0232340 | 0.805747 | 1.149883e-49 | -8.615850e-47 |
| Msa0034350 | Msa0236770 | 0.804262 | 2.350657e-49 | -8.615850e-47 |
| Msa0034350 | Msa0237200 | 0.819406 | 1.181193e-52 | -8.615850e-47 |
| Msa0034350 | Msa0237310 | 0.806103 | 9.676433e-50 | -8.615850e-47 |
| Msa0034350 | Msa0241140 | 0.809762 | 1.611983e-50 | -8.615850e-47 |
| Msa0034350 | Msa0243250 | 0.819107 | 1.381353e-52 | -8.615850e-47 |
| Msa0034350 | Msa0248520 | 0.831634 | 1.493570e-55 | -8.615850e-47 |
| Msa0034350 | Msa0249100 | 0.812528 | 4.051680e-51 | -8.615850e-47 |
| Msa0034350 | Msa0251270 | 0.802572 | 5.265381e-49 | -8.615850e-47 |
| Msa0034350 | Msa0253340 | 0.800536 | 1.376726e-48 | -8.615850e-47 |
| Msa0034350 | Msa0255550 | 0.803400 | 3.549183e-49 | -8.615850e-47 |
| Msa0034350 | Msa0264780 | 0.811532 | 6.680878e-51 | -8.615850e-47 |
| Msa0034350 | Msa0269520 | 0.817689 | 2.894631e-52 | -8.615850e-47 |
| Msa0034350 | Msa0271790 | 0.805567 | 1.254473e-49 | -8.615850e-47 |
| Msa0034350 | Msa0274730 | 0.806706 | 7.219725e-50 | -8.615850e-47 |
| Msa0034350 | Msa0274970 | 0.816650 | 4.957067e-52 | -8.615850e-47 |
| Msa0034350 | Msa0281640 | 0.800051 | 1.727418e-48 | -8.615850e-47 |
| Msa0034350 | Msa0286670 | 0.802957 | 4.383977e-49 | -8.615850e-47 |
| Msa0034350 | Msa0290760 | 0.817418 | 3.331367e-52 | -8.615850e-47 |
| Msa0034350 | Msa0292120 | 0.808584 | 2.882109e-50 | -8.615850e-47 |
| Msa0034350 | Msa0292170 | 0.804593 | 2.005404e-49 | -8.615850e-47 |
| Msa0034350 | Msa0305330 | 0.802001 | 6.899817e-49 | -8.615850e-47 |
| Msa0034350 | Msa0307310 | 0.802773 | 4.784659e-49 | -8.615850e-47 |
| Msa0034350 | Msa0308440 | 0.812078 | 5.079894e-51 | -8.615850e-47 |
| Msa0034350 | Msa0308460 | 0.801035 | 1.088667e-48 | -8.615850e-47 |
| Msa0034350 | Msa0308560 | 0.825119 | 5.577496e-54 | -8.615850e-47 |
| Msa0034350 | Msa0310430 | 0.812042 | 5.173887e-51 | -8.615850e-47 |
| Msa0034350 | Msa0315530 | 0.801345 | 9.408225e-49 | -8.615850e-47 |
| Msa0034350 | Msa0315680 | 0.818819 | 1.606477e-52 | -8.615850e-47 |
| Msa0034350 | Msa0317730 | 0.813256 | 2.806737e-51 | -8.615850e-47 |
| Msa0034350 | Msa0320800 | 0.817460 | 3.260331e-52 | -8.615850e-47 |
| Msa0034350 | Msa0326110 | 0.801602 | 8.334076e-49 | -8.615850e-47 |
| Msa0034350 | Msa0330340 | 0.805154 | 1.531196e-49 | -8.615850e-47 |
| Msa0034350 | Msa0342010 | 0.819714 | 1.004408e-52 | -8.615850e-47 |
| Msa0034350 | Msa0346700 | 0.806065 | 9.855990e-50 | -8.615850e-47 |
| Msa0034350 | Msa0346910 | 0.835473 | 1.644176e-56 | -8.615850e-47 |
| Msa0034350 | Msa0347950 | 0.827766 | 1.304851e-54 | -8.615850e-47 |
| Msa0034350 | Msa0347990 | 0.818609 | 1.793156e-52 | -8.615850e-47 |
| Msa0034350 | Msa0351380 | 0.802954 | 4.389236e-49 | -8.615850e-47 |
| Msa0034350 | Msa0358400 | 0.817514 | 3.170012e-52 | -8.615850e-47 |
| Msa0034350 | Msa0373450 | 0.813174 | 2.925313e-51 | -8.615850e-47 |
| Msa0034350 | Msa0376020 | 0.822412 | 2.401743e-53 | -8.615850e-47 |
| Msa0034350 | Msa0377440 | 0.810884 | 9.230877e-51 | -8.615850e-47 |
| Msa0034350 | Msa0387050 | 0.808616 | 2.836960e-50 | -8.615850e-47 |
| Msa0034350 | Msa0390960 | 0.803607 | 3.215924e-49 | -8.615850e-47 |
| Msa0034350 | Msa0392270 | 0.806045 | 9.951916e-50 | -8.615850e-47 |
| Msa0034350 | Msa0394260 | 0.816670 | 4.907240e-52 | -8.615850e-47 |
| Msa0034350 | Msa0394690 | 0.817018 | 4.099240e-52 | -8.615850e-47 |
| Msa0034350 | Msa0395980 | 0.815819 | 7.604392e-52 | -8.615850e-47 |
| Msa0034350 | Msa0398240 | 0.806720 | 7.171243e-50 | -8.615850e-47 |
| Msa0034350 | Msa0417650 | 0.816637 | 4.990351e-52 | -8.615850e-47 |
| Msa0034350 | Msa0422010 | 0.810537 | 1.097526e-50 | -8.615850e-47 |
| Msa0034350 | Msa0423840 | 0.818104 | 2.333499e-52 | -8.615850e-47 |
| Msa0034350 | Msa0428050 | 0.800720 | 1.262255e-48 | -8.615850e-47 |
| Msa0034350 | Msa0433410 | -0.803689 | 3.092569e-49 | -8.615850e-47 |
| Msa0034350 | Msa0446900 | 0.806031 | 1.002290e-49 | -8.615850e-47 |
| Msa0034350 | Msa0468250 | 0.814135 | 1.797483e-51 | -8.615850e-47 |
| Msa0034350 | Msa0468800 | 0.804996 | 1.651839e-49 | -8.615850e-47 |
| Msa0034350 | Msa0471900 | 0.800379 | 1.481523e-48 | -8.615850e-47 |
| Msa0034350 | Msa0474940 | 0.800607 | 1.331434e-48 | -8.615850e-47 |
| Msa0034350 | Msa0480780 | 0.811756 | 5.971491e-51 | -8.615850e-47 |
| Msa0034350 | Msa0484780 | 0.821062 | 4.929737e-53 | -8.615850e-47 |
| Msa0034350 | Msa0486130 | 0.808030 | 3.783192e-50 | -8.615850e-47 |
| Msa0034350 | Msa0491000 | 0.802890 | 4.525444e-49 | -8.615850e-47 |
| Msa0034350 | Msa0503060 | 0.815340 | 9.719347e-52 | -8.615850e-47 |
| Msa0034350 | Msa0506830 | 0.822381 | 2.442482e-53 | -8.615850e-47 |
| Msa0034350 | Msa0510990 | 0.815535 | 8.794358e-52 | -8.615850e-47 |
| Msa0034350 | Msa0512870 | 0.810096 | 1.366018e-50 | -8.615850e-47 |
| Msa0034350 | Msa0515710 | 0.810135 | 1.340001e-50 | -8.615850e-47 |
| Msa0034350 | Msa0516020 | 0.824408 | 8.201756e-54 | -8.615850e-47 |
| Msa0034350 | Msa0517650 | 0.803384 | 3.577014e-49 | -8.615850e-47 |
| Msa0034350 | Msa0518380 | 0.803010 | 4.274983e-49 | -8.615850e-47 |
| Msa0034350 | Msa0518440 | 0.804140 | 2.492409e-49 | -8.615850e-47 |
| Msa0034350 | Msa0559500 | 0.808991 | 2.359465e-50 | -8.615850e-47 |
| Msa0034350 | Msa0560500 | 0.806439 | 8.219981e-50 | -8.615850e-47 |
| Msa0034350 | Msa0566350 | 0.815506 | 8.925906e-52 | -8.615850e-47 |
| Msa0034350 | Msa0566750 | 0.818204 | 2.214191e-52 | -8.615850e-47 |
| Msa0034350 | Msa0572420 | 0.800624 | 1.320456e-48 | -8.615850e-47 |
| Msa0034350 | Msa0574390 | 0.830846 | 2.333689e-55 | -8.615850e-47 |
| Msa0034350 | Msa0576680 | 0.853248 | 2.709060e-61 | -8.615850e-47 |
| Msa0034350 | Msa0579130 | 0.802148 | 6.436359e-49 | -8.615850e-47 |
| Msa0034350 | Msa0579200 | 0.802059 | 6.713972e-49 | -8.615850e-47 |
| Msa0034350 | Msa0598160 | 0.803646 | 3.156499e-49 | -8.615850e-47 |
| Msa0034350 | Msa0607320 | 0.803514 | 3.362285e-49 | -8.615850e-47 |
| Msa0034350 | Msa0613090 | 0.801330 | 9.475505e-49 | -8.615850e-47 |
| Msa0034350 | Msa0618970 | 0.814375 | 1.590473e-51 | -8.615850e-47 |
| Msa0034350 | Msa0621600 | 0.812042 | 5.173887e-51 | -8.615850e-47 |
| Msa0034350 | Msa0623990 | 0.804875 | 1.750826e-49 | -8.615850e-47 |
| Msa0034350 | Msa0624060 | 0.828818 | 7.277015e-55 | -8.615850e-47 |
| Msa0034350 | Msa0624680 | 0.812959 | 3.261421e-51 | -8.615850e-47 |
| Msa0034350 | Msa0626220 | 0.807034 | 6.156971e-50 | -8.615850e-47 |
| Msa0034350 | Msa0629430 | 0.809099 | 2.236351e-50 | -8.615850e-47 |
| Msa0034350 | Msa0636020 | 0.826465 | 2.672608e-54 | -8.615850e-47 |
| Msa0034350 | Msa0637900 | 0.801004 | 1.104920e-48 | -8.615850e-47 |
| Msa0034350 | Msa0641730 | 0.826495 | 2.629056e-54 | -8.615850e-47 |
| Msa0034350 | Msa0651270 | 0.811648 | 6.301187e-51 | -8.615850e-47 |
| Msa0034350 | Msa0652690 | 0.817687 | 2.898421e-52 | -8.615850e-47 |
| Msa0034350 | Msa0661320 | 0.803584 | 3.250935e-49 | -8.615850e-47 |
| Msa0034350 | Msa0667050 | 0.803266 | 3.784774e-49 | -8.615850e-47 |
| Msa0034350 | Msa0676130 | 0.819324 | 1.233045e-52 | -8.615850e-47 |
| Msa0034350 | Msa0676180 | 0.820884 | 5.416214e-53 | -8.615850e-47 |
| Msa0034350 | Msa0685750 | 0.801558 | 8.508330e-49 | -8.615850e-47 |
| Msa0034350 | Msa0686080 | 0.817251 | 3.633496e-52 | -8.615850e-47 |
| Msa0034350 | Msa0687840 | 0.813825 | 2.104134e-51 | -8.615850e-47 |
| Msa0034350 | Msa0688070 | 0.821520 | 3.864322e-53 | -8.615850e-47 |
| Msa0034350 | Msa0689420 | 0.803696 | 3.081296e-49 | -8.615850e-47 |
| Msa0034350 | Msa0689760 | 0.817171 | 3.785908e-52 | -8.615850e-47 |
| Msa0034350 | Msa0693310 | 0.821059 | 4.936832e-53 | -8.615850e-47 |
| Msa0034350 | Msa0693380 | 0.806023 | 1.006048e-49 | -8.615850e-47 |
| Msa0034350 | Msa0704920 | 0.800032 | 1.742759e-48 | -8.615850e-47 |
| Msa0034350 | Msa0710270 | 0.801083 | 1.064413e-48 | -8.615850e-47 |
| Msa0034350 | Msa0717890 | 0.826772 | 2.257468e-54 | -8.615850e-47 |
| Msa0034350 | Msa0741070 | 0.807741 | 4.359780e-50 | -8.615850e-47 |
| Msa0034350 | Msa0751850 | 0.809918 | 1.491975e-50 | -8.615850e-47 |
| Msa0034350 | Msa0756530 | 0.832504 | 9.103236e-56 | -8.615850e-47 |
| Msa0034350 | Msa0763890 | 0.813334 | 2.698064e-51 | -8.615850e-47 |
| Msa0034350 | Msa0763920 | 0.811618 | 6.396516e-51 | -8.615850e-47 |
| Msa0034350 | Msa0773590 | 0.805020 | 1.632925e-49 | -8.615850e-47 |
| Msa0034350 | Msa0787150 | 0.804048 | 2.604596e-49 | -8.615850e-47 |
| Msa0034350 | Msa0796300 | 0.811863 | 5.659523e-51 | -8.615850e-47 |
| Msa0034350 | Msa0800700 | 0.833955 | 3.960243e-56 | -8.615850e-47 |
| Msa0034350 | Msa0805430 | 0.819365 | 1.206665e-52 | -8.615850e-47 |
| Msa0034350 | Msa0811040 | 0.801813 | 7.543109e-49 | -8.615850e-47 |
| Msa0034350 | Msa0831150 | 0.815588 | 8.559065e-52 | -8.615850e-47 |
| Msa0034350 | Msa0831850 | 0.817145 | 3.838103e-52 | -8.615850e-47 |
| Msa0034350 | Msa0832090 | 0.845864 | 3.112734e-59 | -8.615850e-47 |
| Msa0034350 | Msa0832150 | 0.804141 | 2.490851e-49 | -8.615850e-47 |
| Msa0034350 | Msa0866400 | 0.809957 | 1.463283e-50 | -8.615850e-47 |
| Msa0034350 | Msa0866410 | 0.806946 | 6.426366e-50 | -8.615850e-47 |
| Msa0034350 | Msa0868160 | 0.804216 | 2.402312e-49 | -8.615850e-47 |
| Msa0034350 | Msa0873860 | 0.824342 | 8.503647e-54 | -8.615850e-47 |
| Msa0034350 | Msa0892570 | 0.824441 | 8.059129e-54 | -8.615850e-47 |
| Msa0034350 | Msa0900620 | 0.816857 | 4.455536e-52 | -8.615850e-47 |
| Msa0034350 | Msa0902710 | 0.808597 | 2.864315e-50 | -8.615850e-47 |
| Msa0034350 | Msa0906690 | 0.807904 | 4.023987e-50 | -8.615850e-47 |
| Msa0034350 | Msa0924310 | 0.805968 | 1.032921e-49 | -8.615850e-47 |
| Msa0034350 | Msa0926470 | 0.819319 | 1.236308e-52 | -8.615850e-47 |
| Msa0034350 | Msa0937050 | 0.801189 | 1.012682e-48 | -8.615850e-47 |
| Msa0034350 | Msa0939000 | 0.816840 | 4.493391e-52 | -8.615850e-47 |
| Msa0034350 | Msa0945240 | 0.814835 | 1.258076e-51 | -8.615850e-47 |
| Msa0034350 | Msa0957870 | 0.801505 | 8.721817e-49 | -8.615850e-47 |
| Msa0034350 | Msa0975940 | 0.812200 | 4.777595e-51 | -8.615850e-47 |
| Msa0034350 | Msa0981310 | 0.804152 | 2.477414e-49 | -8.615850e-47 |
| Msa0034350 | Msa0986510 | 0.834436 | 3.001102e-56 | -8.615850e-47 |
| Msa0034350 | Msa1002850 | 0.800946 | 1.135272e-48 | -8.615850e-47 |
| Msa0034350 | Msa1008750 | 0.816726 | 4.767421e-52 | -8.615850e-47 |
| Msa0034350 | Msa1010070 | 0.812064 | 5.115005e-51 | -8.615850e-47 |
| Msa0034350 | Msa1026640 | 0.808300 | 3.314695e-50 | -8.615850e-47 |
| Msa0034350 | Msa1032170 | 0.811652 | 6.288451e-51 | -8.615850e-47 |
| Msa0034350 | Msa1034500 | 0.813951 | 1.973475e-51 | -8.615850e-47 |
| Msa0034350 | Msa1036610 | 0.806342 | 8.618544e-50 | -8.615850e-47 |
| Msa0034350 | Msa1039760 | 0.804351 | 2.251978e-49 | -8.615850e-47 |
| Msa0034350 | Msa1040520 | 0.804340 | 2.264012e-49 | -8.615850e-47 |
| Msa0034350 | Msa1077070 | 0.808455 | 3.071866e-50 | -8.615850e-47 |
| Msa0034350 | Msa1079430 | 0.808815 | 2.573108e-50 | -8.615850e-47 |
| Msa0034350 | Msa1080960 | 0.802805 | 4.713570e-49 | -8.615850e-47 |
| Msa0034350 | Msa1087980 | 0.811998 | 5.287897e-51 | -8.615850e-47 |
| Msa0034350 | Msa1093480 | 0.803642 | 3.162202e-49 | -8.615850e-47 |
| Msa0034350 | Msa1096060 | 0.810016 | 1.421055e-50 | -8.615850e-47 |
| Msa0034350 | Msa1098890 | 0.812377 | 4.370756e-51 | -8.615850e-47 |
| Msa0034350 | Msa1105500 | 0.801806 | 7.568187e-49 | -8.615850e-47 |
| Msa0034350 | Msa1113010 | 0.802727 | 4.891799e-49 | -8.615850e-47 |
| Msa0034350 | Msa1121110 | 0.802913 | 4.476900e-49 | -8.615850e-47 |
| Msa0034350 | Msa1174850 | 0.804311 | 2.295936e-49 | -8.615850e-47 |
| Msa0034350 | Msa1204530 | 0.803160 | 3.980492e-49 | -8.615850e-47 |
| Msa0034350 | Msa1205370 | 0.839381 | 1.639073e-57 | -8.615850e-47 |
| Msa0034350 | Msa1211340 | 0.801036 | 1.088022e-48 | -8.615850e-47 |
| Msa0034350 | Msa1215070 | 0.808379 | 3.188897e-50 | -8.615850e-47 |
| Msa0034350 | Msa1224480 | 0.821008 | 5.073269e-53 | -8.615850e-47 |
| Msa0034350 | Msa1227330 | 0.805797 | 1.122202e-49 | -8.615850e-47 |
| Msa0034350 | Msa1230040 | 0.801664 | 8.094678e-49 | -8.615850e-47 |
| Msa0034350 | Msa1250290 | 0.805509 | 1.290074e-49 | -8.615850e-47 |
| Msa0034350 | Msa1259640 | 0.803298 | 3.726144e-49 | -8.615850e-47 |
| Msa0034350 | Msa1283740 | 0.818756 | 1.660257e-52 | -8.615850e-47 |
| Msa0034350 | Msa1287440 | 0.801670 | 8.070634e-49 | -8.615850e-47 |
| Msa0034350 | Msa1297290 | 0.820417 | 6.934937e-53 | -8.615850e-47 |
| Msa0034350 | Msa1299330 | 0.811762 | 5.952678e-51 | -8.615850e-47 |
| Msa0034350 | Msa1305350 | 0.800582 | 1.347273e-48 | -8.615850e-47 |
| Msa0034350 | Msa1307550 | 0.826430 | 2.725155e-54 | -8.615850e-47 |
| Msa0034350 | Msa1320820 | 0.807414 | 5.113441e-50 | -8.615850e-47 |
| Msa0034350 | Msa1329790 | 0.801255 | 9.813274e-49 | -8.615850e-47 |
| Msa0034350 | Msa1331000 | 0.813744 | 2.191524e-51 | -8.615850e-47 |
| Msa0034350 | Msa1333680 | 0.820253 | 7.561074e-53 | -8.615850e-47 |
| Msa0034350 | Msa1333730 | 0.823481 | 1.353053e-53 | -8.615850e-47 |
| Msa0034350 | Msa1335710 | 0.819323 | 1.233860e-52 | -8.615850e-47 |
| Msa0034350 | Msa1338770 | 0.817973 | 2.498139e-52 | -8.615850e-47 |
| Msa0034350 | Msa1340810 | 0.803834 | 2.885671e-49 | -8.615850e-47 |
| Msa0034350 | Msa1341950 | 0.808025 | 3.792545e-50 | -8.615850e-47 |
| Msa0034350 | Msa1348880 | 0.800340 | 1.509295e-48 | -8.615850e-47 |
| Msa0034350 | Msa1349450 | 0.813204 | 2.880683e-51 | -8.615850e-47 |
| Msa0034350 | Msa1358240 | 0.825139 | 5.516674e-54 | -8.615850e-47 |
| Msa0034350 | Msa1359560 | 0.828318 | 9.610500e-55 | -8.615850e-47 |
| Msa0034350 | Msa1372150 | 0.819368 | 1.204750e-52 | -8.615850e-47 |
| Msa0034350 | Msa1372290 | 0.820828 | 5.581269e-53 | -8.615850e-47 |
| Msa0034350 | Msa1376130 | 0.837624 | 4.656887e-57 | -8.615850e-47 |
| Msa0034350 | Msa1377570 | 0.839410 | 1.611184e-57 | -8.615850e-47 |
| Msa0034350 | Msa1378410 | 0.827038 | 1.950324e-54 | -8.615850e-47 |
| Msa0034350 | Msa1380900 | 0.809830 | 1.558592e-50 | -8.615850e-47 |
| Msa0034350 | Msa1385000 | 0.819452 | 1.152647e-52 | -8.615850e-47 |
| Msa0034350 | Msa1392700 | 0.944283 | 2.592827e-103 | -8.615850e-47 |
| Msa0034350 | Msa1401460 | 0.811592 | 6.481771e-51 | -8.615850e-47 |
| Msa0034350 | Msa1414420 | 0.823125 | 1.639300e-53 | -8.615850e-47 |
| Msa0034350 | Msa1418260 | 0.805650 | 1.204877e-49 | -8.615850e-47 |
| Msa0034350 | Msa1420250 | 0.814828 | 1.263103e-51 | -8.615850e-47 |
| Msa0034350 | Msa1437330 | 0.817140 | 3.848126e-52 | -8.615850e-47 |
| Msa0034350 | Msa1438520 | 0.814956 | 1.182910e-51 | -8.615850e-47 |
| Msa0034350 | Msa1440940 | 0.807815 | 4.204083e-50 | -8.615850e-47 |
| Msa0034350 | Msa1448490 | 0.824946 | 6.126155e-54 | -8.615850e-47 |
| Msa0034350 | Msa1449520 | 0.823162 | 1.607122e-53 | -8.615850e-47 |
| Msa0034350 | Msa1462930 | 0.811872 | 5.633588e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0034350 | MtrunA17_Chr1g0196541 | 96.170 | 731 | 28 | 0 | 40 | 770 | 1 | 731 | 0.0 | 1487 |
| Msa0034350 | MtrunA17_Chr2g0296781 | 66.381 | 699 | 227 | 3 | 40 | 732 | 1 | 697 | 0.0 | 952 |
| Msa0034350 | MtrunA17_Chr6g0477261 | 67.857 | 588 | 181 | 3 | 151 | 732 | 1 | 586 | 0.0 | 808 |
| Msa0034350 | MtrunA17_Chr5g0441581 | 42.384 | 604 | 330 | 7 | 35 | 630 | 31 | 624 | 1.66e-166 | 497 |
| Msa0034350 | MtrunA17_Chr2g0291581 | 36.219 | 566 | 342 | 8 | 36 | 596 | 71 | 622 | 6.54e-116 | 365 |
| Msa0034350 | MtrunA17_Chr1g0207551 | 34.549 | 576 | 351 | 8 | 33 | 597 | 31 | 591 | 2.07e-109 | 352 |
| Msa0034350 | MtrunA17_Chr3g0080351 | 31.902 | 652 | 393 | 6 | 35 | 665 | 75 | 696 | 6.98e-103 | 335 |
| Msa0034350 | MtrunA17_Chr2g0329031 | 31.500 | 600 | 384 | 9 | 25 | 615 | 3 | 584 | 7.89e-103 | 333 |
| Msa0034350 | MtrunA17_Chr1g0202341 | 34.321 | 574 | 352 | 11 | 35 | 596 | 50 | 610 | 3.83e-102 | 329 |
| Msa0034350 | MtrunA17_Chr5g0448761 | 34.075 | 584 | 365 | 12 | 33 | 603 | 57 | 633 | 8.91e-102 | 331 |
| Msa0034350 | MtrunA17_Chr2g0291591 | 32.535 | 501 | 313 | 5 | 35 | 529 | 63 | 544 | 1.24e-90 | 295 |
| Msa0034350 | MtrunA17_Chr5g0440451 | 30.731 | 602 | 371 | 14 | 31 | 608 | 38 | 617 | 6.45e-84 | 286 |
| Msa0034350 | MtrunA17_Chr5g0448511 | 33.735 | 415 | 267 | 5 | 193 | 606 | 1 | 408 | 2.16e-80 | 268 |
| Msa0034350 | MtrunA17_Chr3g0118611 | 35.101 | 396 | 247 | 5 | 201 | 595 | 115 | 501 | 2.75e-77 | 265 |
| Msa0034350 | MtrunA17_Chr8g0363841 | 29.661 | 590 | 392 | 12 | 32 | 607 | 10 | 590 | 6.97e-70 | 242 |
| Msa0034350 | MtrunA17_Chr2g0324011 | 27.383 | 577 | 384 | 12 | 33 | 592 | 7 | 565 | 2.74e-69 | 239 |
| Msa0034350 | MtrunA17_Chr2g0287061 | 30.351 | 570 | 332 | 17 | 35 | 592 | 182 | 698 | 1.37e-68 | 241 |
| Msa0034350 | MtrunA17_Chr2g0287651 | 26.009 | 669 | 449 | 12 | 10 | 654 | 51 | 697 | 2.42e-67 | 239 |
| Msa0034350 | MtrunA17_Chr6g0476441 | 63.235 | 204 | 67 | 3 | 535 | 732 | 1 | 202 | 2.63e-67 | 224 |
| Msa0034350 | MtrunA17_Chr1g0198761 | 28.522 | 575 | 375 | 13 | 39 | 592 | 50 | 609 | 7.51e-63 | 224 |
| Msa0034350 | MtrunA17_Chr1g0203721 | 25.795 | 566 | 397 | 8 | 39 | 592 | 66 | 620 | 2.19e-60 | 219 |
| Msa0034350 | MtrunA17_Chr6g0458391 | 25.258 | 582 | 395 | 11 | 24 | 592 | 208 | 762 | 3.27e-56 | 206 |
| Msa0034350 | MtrunA17_Chr1g0203051 | 26.882 | 558 | 359 | 14 | 42 | 576 | 85 | 616 | 3.60e-55 | 201 |
| Msa0034350 | MtrunA17_Chr3g0082121 | 28.272 | 573 | 373 | 19 | 33 | 592 | 40 | 587 | 2.00e-53 | 197 |
| Msa0034350 | MtrunA17_Chr2g0276841 | 25.129 | 581 | 387 | 14 | 36 | 592 | 70 | 626 | 3.68e-50 | 187 |
| Msa0034350 | MtrunA17_Chr2g0294841 | 23.444 | 755 | 484 | 24 | 36 | 736 | 45 | 759 | 8.19e-47 | 178 |
| Msa0034350 | MtrunA17_Chr5g0431001 | 27.252 | 433 | 277 | 12 | 36 | 441 | 61 | 482 | 2.00e-41 | 159 |
| Msa0034350 | MtrunA17_Chr2g0290391 | 24.615 | 585 | 388 | 15 | 36 | 592 | 51 | 610 | 5.21e-40 | 157 |
| Msa0034350 | MtrunA17_Chr1g0164591 | 33.766 | 231 | 150 | 3 | 195 | 423 | 79 | 308 | 3.02e-39 | 148 |
| Msa0034350 | MtrunA17_Chr7g0258861 | 28.269 | 283 | 196 | 4 | 33 | 308 | 7 | 289 | 6.47e-32 | 126 |
| Msa0034350 | MtrunA17_Chr6g0476431 | 56.977 | 86 | 37 | 0 | 40 | 125 | 1 | 86 | 3.17e-27 | 105 |
| Msa0034350 | MtrunA17_Chr2g0308841 | 24.454 | 229 | 166 | 4 | 367 | 594 | 4 | 226 | 4.78e-17 | 82.0 |
| Msa0034350 | MtrunA17_Chr1g0172041 | 36.364 | 99 | 62 | 1 | 507 | 605 | 1 | 98 | 3.19e-15 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0034350 | AT4G15090.1 | 33.333 | 651 | 399 | 11 | 33 | 664 | 48 | 682 | 6.78e-115 | 367 |
| Msa0034350 | AT4G15090.5 | 33.333 | 651 | 399 | 11 | 33 | 664 | 48 | 682 | 6.78e-115 | 367 |
| Msa0034350 | AT4G15090.3 | 33.333 | 651 | 399 | 11 | 33 | 664 | 48 | 682 | 6.78e-115 | 367 |
| Msa0034350 | AT4G15090.2 | 33.333 | 651 | 399 | 11 | 33 | 664 | 48 | 682 | 6.78e-115 | 367 |
| Msa0034350 | AT4G15090.4 | 33.333 | 651 | 399 | 11 | 33 | 664 | 48 | 682 | 6.78e-115 | 367 |
| Msa0034350 | AT3G22170.2 | 32.305 | 616 | 360 | 8 | 10 | 598 | 36 | 621 | 4.32e-104 | 339 |
| Msa0034350 | AT3G22170.1 | 32.305 | 616 | 360 | 8 | 10 | 598 | 36 | 621 | 4.32e-104 | 339 |
| Msa0034350 | AT1G52520.1 | 33.791 | 583 | 359 | 13 | 26 | 596 | 72 | 639 | 2.50e-101 | 328 |
| Msa0034350 | AT4G38180.1 | 32.286 | 573 | 370 | 8 | 33 | 595 | 70 | 634 | 4.09e-101 | 330 |
| Msa0034350 | AT1G76320.3 | 32.465 | 576 | 351 | 11 | 40 | 602 | 1 | 551 | 5.18e-95 | 310 |
| Msa0034350 | AT1G76320.1 | 32.465 | 576 | 351 | 11 | 40 | 602 | 1 | 551 | 9.30e-95 | 311 |
| Msa0034350 | AT1G76320.4 | 32.465 | 576 | 351 | 11 | 40 | 602 | 1 | 551 | 9.30e-95 | 311 |
| Msa0034350 | AT1G76320.2 | 32.465 | 576 | 351 | 11 | 40 | 602 | 1 | 551 | 1.05e-94 | 311 |
| Msa0034350 | AT1G80010.1 | 32.929 | 577 | 368 | 11 | 36 | 599 | 95 | 665 | 6.90e-94 | 309 |
| Msa0034350 | AT4G19990.3 | 33.448 | 583 | 325 | 11 | 39 | 600 | 24 | 564 | 2.12e-90 | 300 |
| Msa0034350 | AT4G19990.4 | 33.448 | 583 | 325 | 11 | 39 | 600 | 24 | 564 | 2.12e-90 | 300 |
| Msa0034350 | AT4G19990.5 | 33.448 | 583 | 325 | 11 | 39 | 600 | 24 | 564 | 3.02e-90 | 300 |
| Msa0034350 | AT4G19990.6 | 33.448 | 583 | 325 | 11 | 39 | 600 | 24 | 564 | 3.08e-90 | 300 |
| Msa0034350 | AT4G19990.2 | 33.448 | 583 | 325 | 11 | 39 | 600 | 24 | 564 | 3.08e-90 | 300 |
| Msa0034350 | AT4G19990.7 | 33.448 | 583 | 325 | 11 | 39 | 600 | 38 | 578 | 3.98e-90 | 300 |
| Msa0034350 | AT4G19990.1 | 34.990 | 503 | 283 | 9 | 101 | 600 | 46 | 507 | 4.16e-86 | 287 |
| Msa0034350 | AT2G32250.8 | 35.696 | 381 | 237 | 3 | 213 | 592 | 136 | 509 | 1.43e-79 | 271 |
| Msa0034350 | AT2G32250.5 | 35.696 | 381 | 237 | 3 | 213 | 592 | 177 | 550 | 1.50e-79 | 271 |
| Msa0034350 | AT2G32250.7 | 35.696 | 381 | 237 | 3 | 213 | 592 | 136 | 509 | 1.50e-79 | 271 |
| Msa0034350 | AT2G32250.6 | 35.696 | 381 | 237 | 3 | 213 | 592 | 177 | 550 | 1.92e-79 | 272 |
| Msa0034350 | AT2G32250.1 | 35.696 | 381 | 237 | 3 | 213 | 592 | 177 | 550 | 1.92e-79 | 272 |
| Msa0034350 | AT2G32250.3 | 35.696 | 381 | 237 | 3 | 213 | 592 | 177 | 550 | 1.92e-79 | 272 |
| Msa0034350 | AT2G32250.2 | 35.696 | 381 | 237 | 3 | 213 | 592 | 177 | 550 | 2.01e-79 | 272 |
| Msa0034350 | AT2G32250.4 | 35.696 | 381 | 237 | 3 | 213 | 592 | 177 | 550 | 2.01e-79 | 272 |
| Msa0034350 | AT2G27110.2 | 30.602 | 598 | 357 | 17 | 35 | 615 | 48 | 604 | 2.28e-77 | 267 |
| Msa0034350 | AT2G27110.1 | 30.602 | 598 | 357 | 17 | 35 | 615 | 48 | 604 | 2.28e-77 | 267 |
| Msa0034350 | AT2G27110.3 | 32.543 | 464 | 287 | 9 | 160 | 615 | 14 | 459 | 8.17e-75 | 257 |
| Msa0034350 | AT5G18960.2 | 29.610 | 564 | 343 | 17 | 35 | 592 | 210 | 725 | 4.30e-69 | 243 |
| Msa0034350 | AT5G18960.1 | 29.610 | 564 | 343 | 17 | 35 | 592 | 210 | 725 | 4.30e-69 | 243 |
| Msa0034350 | AT4G38170.1 | 31.313 | 396 | 260 | 5 | 206 | 599 | 18 | 403 | 1.53e-68 | 236 |
| Msa0034350 | AT3G06250.2 | 28.597 | 563 | 347 | 16 | 35 | 592 | 189 | 701 | 1.53e-68 | 241 |
| Msa0034350 | AT3G06250.1 | 28.597 | 563 | 347 | 16 | 35 | 592 | 189 | 701 | 1.53e-68 | 241 |
| Msa0034350 | AT3G06250.3 | 28.597 | 563 | 347 | 16 | 35 | 592 | 189 | 701 | 1.53e-68 | 241 |
| Msa0034350 | AT1G10240.2 | 26.162 | 581 | 381 | 16 | 36 | 592 | 48 | 604 | 6.58e-51 | 189 |
| Msa0034350 | AT1G10240.1 | 26.162 | 581 | 381 | 16 | 36 | 592 | 48 | 604 | 6.58e-51 | 189 |
| Msa0034350 | AT5G28530.3 | 24.747 | 594 | 376 | 17 | 36 | 592 | 55 | 614 | 2.33e-42 | 164 |
| Msa0034350 | AT5G28530.2 | 24.747 | 594 | 376 | 17 | 36 | 592 | 55 | 614 | 2.33e-42 | 164 |
| Msa0034350 | AT5G28530.1 | 24.497 | 596 | 379 | 17 | 36 | 592 | 55 | 618 | 3.19e-41 | 161 |
| Msa0034350 | AT5G28530.5 | 23.356 | 578 | 341 | 19 | 36 | 592 | 55 | 551 | 4.73e-28 | 120 |
| Msa0034350 | AT5G28530.4 | 23.103 | 580 | 344 | 19 | 36 | 592 | 55 | 555 | 4.46e-27 | 117 |
Find 155 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAATATACAAAATTTATTT+TGG | 0.073660 | 1_1:-62290661 | Msa0034350:CDS |
| TGGCAATGGTAAATGCTTTC+TGG | 0.145575 | 1_1:+62289898 | None:intergenic |
| TACTTGAAATTCTTTAAATT+TGG | 0.164119 | 1_1:+62289878 | None:intergenic |
| GAGTATTTACCCAACATTTC+TGG | 0.181169 | 1_1:+62290308 | None:intergenic |
| AATTAAAGACGTGGTGTTTA+AGG | 0.198475 | 1_1:-62289757 | Msa0034350:CDS |
| TGTTGCTTATTTGAGTTTAA+AGG | 0.212760 | 1_1:-62289696 | Msa0034350:CDS |
| TGTATGTGAAAGACACATTT+TGG | 0.241766 | 1_1:-62290124 | Msa0034350:CDS |
| ATTGCTTGTGTGAGTCATTT+TGG | 0.243877 | 1_1:-62289936 | Msa0034350:CDS |
| CATTCGTCTGAAGAAGAATT+AGG | 0.251158 | 1_1:+62291535 | None:intergenic |
| ATGATAATGAATGGTTAAAA+TGG | 0.261144 | 1_1:-62290178 | Msa0034350:CDS |
| TACGCTAATCGTGTAGGTTT+TGG | 0.267234 | 1_1:-62291196 | Msa0034350:CDS |
| AGAATTGCAACGTGTTAATA+TGG | 0.267882 | 1_1:-62289541 | Msa0034350:CDS |
| GTTCAGAACAGGAAATATTC+TGG | 0.287164 | 1_1:+62288917 | None:intergenic |
| AGTAGAAGCAACTTCATAAA+AGG | 0.295990 | 1_1:+62289509 | None:intergenic |
| CTAAATGTCATCCCAGTTCT+AGG | 0.302654 | 1_1:+62291253 | None:intergenic |
| GGTCTGAAGAAGAAGTTATT+AGG | 0.310139 | 1_1:-62291231 | Msa0034350:CDS |
| TAATACTAGCTTTGAAAGAT+TGG | 0.313945 | 1_1:-62289832 | Msa0034350:CDS |
| TTTATGATTTGAGGACAATA+TGG | 0.324306 | 1_1:+62288940 | None:intergenic |
| TCTGAGCAAAAGTGATTTCA+TGG | 0.327773 | 1_1:-62290237 | Msa0034350:CDS |
| AGGGCTGCATATGAATATTT+TGG | 0.330794 | 1_1:-62290623 | Msa0034350:CDS |
| TTCAATAACAATTCTTGAAA+TGG | 0.335352 | 1_1:+62290997 | None:intergenic |
| TGGTAAATGCTTTCTGGAAA+TGG | 0.337237 | 1_1:+62289904 | None:intergenic |
| CTAGAACTGGGATGACATTT+AGG | 0.343463 | 1_1:-62291252 | Msa0034350:CDS |
| CACCATCGATGACGAGCTTT+AGG | 0.352465 | 1_1:+62290356 | None:intergenic |
| AGGATGGTTGATCATTCTTA+TGG | 0.354581 | 1_1:+62288792 | None:intergenic |
| CAATGGATATGGATGATAAA+AGG | 0.357213 | 1_1:-62290682 | Msa0034350:CDS |
| AATGCTTGTGTAGCTTTAGA+TGG | 0.358270 | 1_1:-62291028 | Msa0034350:CDS |
| TCTTCGGTAATTATGCCATT+TGG | 0.360910 | 1_1:+62290416 | None:intergenic |
| CTTTGTGTGCTTAAGCTCAT+TGG | 0.361479 | 1_1:-62289654 | Msa0034350:CDS |
| TTTAGATTGGATGAGAGTTC+GGG | 0.368260 | 1_1:-62290938 | Msa0034350:CDS |
| ATGGGCATCCTCTTTCAAAA+AGG | 0.374223 | 1_1:-62289326 | Msa0034350:CDS |
| TTAATCGTATTGAAACTTGT+AGG | 0.381649 | 1_1:-62288621 | Msa0034350:three_prime_UTR |
| TTGCCATTGGTCCCCTTTGT+TGG | 0.383794 | 1_1:-62290554 | Msa0034350:CDS |
| TTTCATTGCTTTATCATCTT+CGG | 0.384250 | 1_1:+62290400 | None:intergenic |
| TAAGGTATCTTTCAATGAAA+AGG | 0.385167 | 1_1:-62289739 | Msa0034350:CDS |
| ATTTGATGAGCGGCACCGTT+GGG | 0.394490 | 1_1:-62290153 | Msa0034350:CDS |
| GGGTGTGGGAATCTTACTTC+TGG | 0.395908 | 1_1:-62290827 | Msa0034350:CDS |
| TACGGTGGTGGTTGCGGAAG+CGG | 0.405754 | 1_1:+62291598 | None:intergenic |
| CAACAGTAACTCTCAGTAAT+GGG | 0.407618 | 1_1:-62289344 | Msa0034350:CDS |
| ATTAGGGCACAGAAACGATT+TGG | 0.414520 | 1_1:+62291552 | None:intergenic |
| TTTGCAGCTGCTATTGTTGT+TGG | 0.421819 | 1_1:-62291289 | Msa0034350:CDS |
| GAAGATGAAGAACCTAGAAC+TGG | 0.423912 | 1_1:-62291265 | Msa0034350:CDS |
| ATTTACAGAAAGTGATGAAC+AGG | 0.427795 | 1_1:-62289467 | Msa0034350:CDS |
| GAACGCTACGGTGGTGGTTG+CGG | 0.430588 | 1_1:+62291592 | None:intergenic |
| ATACTTATTTGTTAAATAAG+TGG | 0.431247 | 1_1:+62290580 | None:intergenic |
| AACGGTGCGATTTGCAGAAA+TGG | 0.432388 | 1_1:+62291665 | None:intergenic |
| ACAATCCTAGTCACGTGGTT+TGG | 0.434005 | 1_1:+62289372 | None:intergenic |
| AGTTCTAAATTCCTCTCTAC+AGG | 0.439637 | 1_1:+62290911 | None:intergenic |
| TTTACACTTATAATAGCATT+GGG | 0.440864 | 1_1:-62288495 | Msa0034350:three_prime_UTR |
| ATATTCTGGTTTATGATTTG+AGG | 0.444118 | 1_1:+62288931 | None:intergenic |
| ATTCGTCTGAAGAAGAATTA+GGG | 0.449311 | 1_1:+62291536 | None:intergenic |
| AGAGTGTTAAATGTAAAGAT+AGG | 0.452463 | 1_1:+62288585 | None:intergenic |
| ATTTACACTTATAATAGCAT+TGG | 0.452863 | 1_1:-62288496 | Msa0034350:three_prime_UTR |
| GACAACATTGAAGCGGTTTG+TGG | 0.452916 | 1_1:-62290033 | Msa0034350:CDS |
| TATTTGATGAGCGGCACCGT+TGG | 0.456287 | 1_1:-62290154 | Msa0034350:CDS |
| AAGTAAGACGGCTAAGACTT+GGG | 0.460155 | 1_1:-62290775 | Msa0034350:CDS |
| TACCTGTAAAAGTTCAGAAC+AGG | 0.463097 | 1_1:+62288906 | None:intergenic |
| GAAGAAGGTTCCAGAAATGT+TGG | 0.468659 | 1_1:-62290318 | Msa0034350:CDS |
| TGGATGCTAAAACTCTTACT+TGG | 0.470376 | 1_1:-62290478 | Msa0034350:CDS |
| TGATGGTTCACTCCAACAAA+GGG | 0.476976 | 1_1:+62290542 | None:intergenic |
| TTCTTCGAACGCTACGGTGG+TGG | 0.477677 | 1_1:+62291586 | None:intergenic |
| AAAGTAAGACGGCTAAGACT+TGG | 0.482575 | 1_1:-62290776 | Msa0034350:CDS |
| TTTGGGCAGATGCGAGATGT+AGG | 0.483477 | 1_1:-62290643 | Msa0034350:CDS |
| GGGCACGAAGTGCACGAATC+GGG | 0.491204 | 1_1:-62291738 | None:intergenic |
| GGTCTATGTCTTTACGAGGA+TGG | 0.493066 | 1_1:+62288776 | None:intergenic |
| ATGATGGTTCACTCCAACAA+AGG | 0.494911 | 1_1:+62290541 | None:intergenic |
| TTAACCATTCATTATCATGT+AGG | 0.496964 | 1_1:+62290183 | None:intergenic |
| CAATCTAAAATACCGTCCTC+TGG | 0.503024 | 1_1:+62290952 | None:intergenic |
| CCAACAGTAACTCTCAGTAA+TGG | 0.503577 | 1_1:-62289345 | Msa0034350:CDS |
| AAGTGGTGACGAGACGGTTG+TGG | 0.507244 | 1_1:+62291625 | None:intergenic |
| AGTATGTTCTTGTGTAATCC+TGG | 0.507755 | 1_1:+62289401 | None:intergenic |
| GGTGTTGAGATGAATGGGTG+TGG | 0.508197 | 1_1:-62290842 | Msa0034350:CDS |
| TACTAGCTTTGAAAGATTGG+AGG | 0.508243 | 1_1:-62289829 | Msa0034350:CDS |
| ACATAGACCAACCACTACTC+TGG | 0.508434 | 1_1:-62288762 | Msa0034350:three_prime_UTR |
| AAGAAGGTTCCAGAAATGTT+GGG | 0.510364 | 1_1:-62290317 | Msa0034350:CDS |
| CAACTCCAAACCACGTGACT+AGG | 0.513724 | 1_1:-62289377 | Msa0034350:CDS |
| GAGGTAAGATATTGCTTCGA+AGG | 0.514633 | 1_1:+62291076 | None:intergenic |
| TTTGTTGGAGTGAACCATCA+TGG | 0.516130 | 1_1:-62290539 | Msa0034350:CDS |
| CTGTGGGTGTTGAGATGAAT+GGG | 0.521887 | 1_1:-62290847 | Msa0034350:CDS |
| AAGTGATTTCATGGAGAGGT+GGG | 0.523064 | 1_1:-62290228 | Msa0034350:CDS |
| ATTGAATGATAAAATCGAAA+AGG | 0.526317 | 1_1:-62289994 | Msa0034350:CDS |
| AAATTCTTTAAATTTGGCAA+TGG | 0.528148 | 1_1:+62289884 | None:intergenic |
| ATTGAACATAATCATGAACT+TGG | 0.529122 | 1_1:-62290980 | Msa0034350:CDS |
| TTACTTGGTTGTTCACAAGA+TGG | 0.537284 | 1_1:-62290463 | Msa0034350:CDS |
| TTCCTAAAGCTCGTCATCGA+TGG | 0.537412 | 1_1:-62290358 | Msa0034350:CDS |
| TTGGGCAGATGCGAGATGTA+GGG | 0.538615 | 1_1:-62290642 | Msa0034350:CDS |
| ATAACCTACATGATAATGAA+TGG | 0.540605 | 1_1:-62290187 | Msa0034350:CDS |
| ATTTAAAGAATTTCAAGTAG+AGG | 0.542601 | 1_1:-62289874 | Msa0034350:CDS |
| CTTGTGGCATATAATGAAGA+AGG | 0.550485 | 1_1:-62290333 | Msa0034350:CDS |
| ATTACAGCAATGTAAATACA+AGG | 0.553033 | 1_1:-62288559 | Msa0034350:three_prime_UTR |
| ATAAAATAGTCTGACCATGA+TGG | 0.558886 | 1_1:+62290525 | None:intergenic |
| AAAGTGATTTCATGGAGAGG+TGG | 0.559223 | 1_1:-62290229 | Msa0034350:CDS |
| CTTCTAAAGAGCCATCCTCC+AGG | 0.560777 | 1_1:-62289419 | Msa0034350:CDS |
| GAAAGTGATGAACAGGATCA+AGG | 0.562243 | 1_1:-62289460 | Msa0034350:CDS |
| GATCAAGGTGGGATTAATGT+TGG | 0.565918 | 1_1:-62290884 | Msa0034350:CDS |
| TAGAACTCAATGATCAAGGT+GGG | 0.568037 | 1_1:-62290895 | Msa0034350:CDS |
| TCTGTGGGTGTTGAGATGAA+TGG | 0.568290 | 1_1:-62290848 | Msa0034350:CDS |
| TACCTCGAAAACACAGTGTA+GGG | 0.568827 | 1_1:-62291059 | Msa0034350:CDS |
| TTACCTCGAAAACACAGTGT+AGG | 0.570982 | 1_1:-62291060 | Msa0034350:CDS |
| ATGAATTACGCTAATCGTGT+AGG | 0.573095 | 1_1:-62291202 | Msa0034350:CDS |
| AATTTAGAACTCAATGATCA+AGG | 0.575137 | 1_1:-62290899 | Msa0034350:CDS |
| GTGTTGAGATGAATGGGTGT+GGG | 0.575538 | 1_1:-62290841 | Msa0034350:CDS |
| ATGCATGGACATGCTCCAAA+TGG | 0.577612 | 1_1:-62290431 | Msa0034350:CDS |
| TAAAATGGTTATTTGATGAG+CGG | 0.580254 | 1_1:-62290163 | Msa0034350:CDS |
| AAATAAGTATGACTTGCCAT+TGG | 0.582213 | 1_1:-62290567 | Msa0034350:CDS |
| ACTCAAAGACAACATTGAAG+CGG | 0.582318 | 1_1:-62290040 | Msa0034350:CDS |
| TAAAATCGAAAAGGAAAGCA+TGG | 0.582917 | 1_1:-62289985 | Msa0034350:CDS |
| AAACGATCAAAGTCAAGAAG+AGG | 0.583429 | 1_1:-62289226 | Msa0034350:intron |
| CCATTACTGAGAGTTACTGT+TGG | 0.587222 | 1_1:+62289345 | None:intergenic |
| AAAGAATTCTTCGAACGCTA+CGG | 0.587517 | 1_1:+62291580 | None:intergenic |
| AGATATACATTGATGAAACA+TGG | 0.592243 | 1_1:-62289570 | Msa0034350:CDS |
| ACTCCAACAAAGGGGACCAA+TGG | 0.597493 | 1_1:+62290551 | None:intergenic |
| CTCGTCATCGATGGTGCTTG+TGG | 0.597557 | 1_1:-62290349 | Msa0034350:CDS |
| ACATCTTAGTGATGTAAACC+AGG | 0.599828 | 1_1:-62289051 | Msa0034350:intron |
| TAGCATGTAATTGTGCAAGA+AGG | 0.600918 | 1_1:-62291120 | Msa0034350:CDS |
| AGACGGCTAAGACTTGGGAG+AGG | 0.601064 | 1_1:-62290770 | Msa0034350:CDS |
| GGTAGAAATCTTCAATCTGT+GGG | 0.601916 | 1_1:-62290863 | Msa0034350:CDS |
| AACCACCATGTCCAGAGTAG+TGG | 0.606476 | 1_1:+62288751 | None:intergenic |
| AATGTGTCTTTCACATACAC+AGG | 0.609838 | 1_1:+62290128 | None:intergenic |
| CGAAAACACAGTGTAGGGCT+AGG | 0.611004 | 1_1:-62291054 | Msa0034350:CDS |
| GTAGAGAACGTGGGTTCGTG+AGG | 0.615132 | 1_1:+62291705 | None:intergenic |
| GAATTCTTCGAACGCTACGG+TGG | 0.616441 | 1_1:+62291583 | None:intergenic |
| TCTTGTGTAATCCTGGAGGA+TGG | 0.617853 | 1_1:+62289408 | None:intergenic |
| ATAGCTGCTGTTAAACAAAG+TGG | 0.623526 | 1_1:-62288728 | Msa0034350:three_prime_UTR |
| ACCAACCACTACTCTGGACA+TGG | 0.633901 | 1_1:-62288756 | Msa0034350:three_prime_UTR |
| AGATGGTTAGAATGTATGCA+TGG | 0.634404 | 1_1:-62290446 | Msa0034350:CDS |
| GTTCGGGGCCTCCTGTAGAG+AGG | 0.635599 | 1_1:-62290922 | Msa0034350:CDS |
| TCTAAATTCCTCTCTACAGG+AGG | 0.642714 | 1_1:+62290914 | None:intergenic |
| TGGTAGAAATCTTCAATCTG+TGG | 0.643326 | 1_1:-62290864 | Msa0034350:CDS |
| ATTCTGTGCAGAAAGTAAGA+CGG | 0.644927 | 1_1:-62290787 | Msa0034350:CDS |
| AACTTGGTCAAACCAGAGGA+CGG | 0.650612 | 1_1:-62290964 | Msa0034350:CDS |
| ACCATGTCCAGAGTAGTGGT+TGG | 0.651376 | 1_1:+62288755 | None:intergenic |
| AAGATGAAGAACCTAGAACT+GGG | 0.654596 | 1_1:-62291264 | Msa0034350:CDS |
| AGTGATTTCATGGAGAGGTG+GGG | 0.655787 | 1_1:-62290227 | Msa0034350:CDS |
| CAAAACTCCAAAGAACAGCA+AGG | 0.655801 | 1_1:-62289256 | Msa0034350:CDS |
| GGTTGGTCTATGTCTTTACG+AGG | 0.660233 | 1_1:+62288772 | None:intergenic |
| CGTAGAAGAGTAGAGAACGT+GGG | 0.666218 | 1_1:+62291696 | None:intergenic |
| TCGTAGAAGAGTAGAGAACG+TGG | 0.669406 | 1_1:+62291695 | None:intergenic |
| AACCACTACTCTGGACATGG+TGG | 0.671470 | 1_1:-62288753 | Msa0034350:three_prime_UTR |
| TTACAGCAATGTAAATACAA+GGG | 0.672978 | 1_1:-62288558 | Msa0034350:three_prime_UTR |
| TTAGATTGGATGAGAGTTCG+GGG | 0.677484 | 1_1:-62290937 | Msa0034350:CDS |
| TCACATACACAGGAACCCAA+CGG | 0.679348 | 1_1:+62290138 | None:intergenic |
| TCGATGACGAGCTTTAGGAA+AGG | 0.682769 | 1_1:+62290361 | None:intergenic |
| AAAAGAGAAAATTAAAGACG+TGG | 0.683650 | 1_1:-62289766 | Msa0034350:CDS |
| GCAAAAGTGATTTCATGGAG+AGG | 0.684724 | 1_1:-62290232 | Msa0034350:CDS |
| GTGTGCAATATTGTCGAACG+TGG | 0.685729 | 1_1:-62290498 | Msa0034350:CDS |
| CTGGAATGTCGACTGCACAA+CGG | 0.692769 | 1_1:-62290100 | Msa0034350:CDS |
| CATGAACTTGGTCAAACCAG+AGG | 0.694396 | 1_1:-62290968 | Msa0034350:CDS |
| GAATTGTGAAGCGATGAAAA+CGG | 0.698335 | 1_1:+62291647 | None:intergenic |
| GGTGGAGGAAGTATGTAAAG+CGG | 0.705310 | 1_1:-62289593 | Msa0034350:CDS |
| GATCAACAATCCTAGTCACG+TGG | 0.707154 | 1_1:+62289367 | None:intergenic |
| TTTACATACTTCCTCCACCG+TGG | 0.708646 | 1_1:+62289597 | None:intergenic |
| GATGGTTCACTCCAACAAAG+GGG | 0.715401 | 1_1:+62290543 | None:intergenic |
| TTAGAACTCAATGATCAAGG+TGG | 0.716064 | 1_1:-62290896 | Msa0034350:CDS |
| ATGTTCTTGTGTAATCCTGG+AGG | 0.762199 | 1_1:+62289404 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAATTTATTGTATTTAG+TGG | - | chr1_1:62288831-62288850 | Msa0034350:intron | 10.0% |
| !!! | GAATATACAAAATTTATTTT+GGG | - | chr1_1:62289548-62289567 | Msa0034350:CDS | 10.0% |
| !!! | GGAATATACAAAATTTATTT+TGG | - | chr1_1:62289547-62289566 | Msa0034350:CDS | 15.0% |
| !!! | ATACTTATTTGTTAAATAAG+TGG | + | chr1_1:62289631-62289650 | None:intergenic | 15.0% |
| !! | TACTTGAAATTCTTTAAATT+TGG | + | chr1_1:62290333-62290352 | None:intergenic | 15.0% |
| !! | AAATAGAGAAAATAAATTTG+TGG | + | chr1_1:62291020-62291039 | None:intergenic | 15.0% |
| !!! | ATAAATAAATGTCTGATTTT+GGG | - | chr1_1:62291077-62291096 | Msa0034350:CDS | 15.0% |
| !!! | ATTTATTTGATTATTTCTTG+TGG | - | chr1_1:62291324-62291343 | Msa0034350:CDS | 15.0% |
| !! | TTCAATAACAATTCTTGAAA+TGG | + | chr1_1:62289214-62289233 | None:intergenic | 20.0% |
| !!! | ATGATAATGAATGGTTAAAA+TGG | - | chr1_1:62290030-62290049 | Msa0034350:CDS | 20.0% |
| !! | ATTGAATGATAAAATCGAAA+AGG | - | chr1_1:62290214-62290233 | Msa0034350:CDS | 20.0% |
| !! | AAATTCTTTAAATTTGGCAA+TGG | + | chr1_1:62290327-62290346 | None:intergenic | 20.0% |
| !!! | ATTTAAAGAATTTCAAGTAG+AGG | - | chr1_1:62290334-62290353 | Msa0034350:CDS | 20.0% |
| !!! | CATAAATAAATGTCTGATTT+TGG | - | chr1_1:62291076-62291095 | Msa0034350:CDS | 20.0% |
| !! | TTATTTGAACATTTACATTG+TGG | - | chr1_1:62291213-62291232 | Msa0034350:CDS | 20.0% |
| !! | ATTTACACTTATAATAGCAT+TGG | - | chr1_1:62291712-62291731 | Msa0034350:five_prime_UTR | 20.0% |
| !! | TTTACACTTATAATAGCATT+GGG | - | chr1_1:62291713-62291732 | Msa0034350:five_prime_UTR | 20.0% |
| !! | TTTTGTCTCTTATGATATGA+AGG | + | chr1_1:62288742-62288761 | None:intergenic | 25.0% |
| ! | ATTGAACATAATCATGAACT+TGG | - | chr1_1:62289228-62289247 | Msa0034350:CDS | 25.0% |
| !! | AATTTAGAACTCAATGATCA+AGG | - | chr1_1:62289309-62289328 | Msa0034350:CDS | 25.0% |
| !! | TAGTCAATTTTATTGTGCAA+TGG | - | chr1_1:62289509-62289528 | Msa0034350:CDS | 25.0% |
| !! | ATTTTATTGTGCAATGGATA+TGG | - | chr1_1:62289515-62289534 | Msa0034350:CDS | 25.0% |
| ! | TTTCATTGCTTTATCATCTT+CGG | + | chr1_1:62289811-62289830 | None:intergenic | 25.0% |
| !! | ATAACCTACATGATAATGAA+TGG | - | chr1_1:62290021-62290040 | Msa0034350:CDS | 25.0% |
| ! | TTAACCATTCATTATCATGT+AGG | + | chr1_1:62290028-62290047 | None:intergenic | 25.0% |
| ! | TAAAATGGTTATTTGATGAG+CGG | - | chr1_1:62290045-62290064 | Msa0034350:CDS | 25.0% |
| !!! | AGTATAGACTCATTTTTTGA+TGG | - | chr1_1:62290137-62290156 | Msa0034350:CDS | 25.0% |
| !!! | GTATAGACTCATTTTTTGAT+GGG | - | chr1_1:62290138-62290157 | Msa0034350:CDS | 25.0% |
| !!! | TAATACTAGCTTTGAAAGAT+TGG | - | chr1_1:62290376-62290395 | Msa0034350:CDS | 25.0% |
| ! | AAAAGAGAAAATTAAAGACG+TGG | - | chr1_1:62290442-62290461 | Msa0034350:CDS | 25.0% |
| !! | TAAGGTATCTTTCAATGAAA+AGG | - | chr1_1:62290469-62290488 | Msa0034350:CDS | 25.0% |
| !! | TGTTGCTTATTTGAGTTTAA+AGG | - | chr1_1:62290512-62290531 | Msa0034350:CDS | 25.0% |
| ! | AGATATACATTGATGAAACA+TGG | - | chr1_1:62290638-62290657 | Msa0034350:CDS | 25.0% |
| ! | TCATCAGTTTCTTGAAAAAT+AGG | + | chr1_1:62291131-62291150 | None:intergenic | 25.0% |
| !!! | AAATAAAAATAAAGAGCACC+AGG | + | chr1_1:62291199-62291218 | None:intergenic | 25.0% |
| ! | TTTATGATTTGAGGACAATA+TGG | + | chr1_1:62291271-62291290 | None:intergenic | 25.0% |
| !!! | ATATTCTGGTTTATGATTTG+AGG | + | chr1_1:62291280-62291299 | None:intergenic | 25.0% |
| ! | TTAATCGTATTGAAACTTGT+AGG | - | chr1_1:62291587-62291606 | Msa0034350:five_prime_UTR | 25.0% |
| !! | AGAGTGTTAAATGTAAAGAT+AGG | + | chr1_1:62291626-62291645 | None:intergenic | 25.0% |
| ! | ATTACAGCAATGTAAATACA+AGG | - | chr1_1:62291649-62291668 | Msa0034350:five_prime_UTR | 25.0% |
| ! | TTACAGCAATGTAAATACAA+GGG | - | chr1_1:62291650-62291669 | Msa0034350:five_prime_UTR | 25.0% |
| ATTCGTCTGAAGAAGAATTA+GGG | + | chr1_1:62288675-62288694 | None:intergenic | 30.0% | |
| AGTTCAAAAAATGCAGATGA+TGG | - | chr1_1:62289048-62289067 | Msa0034350:intron | 30.0% | |
| ! | TTTTAGATTGGATGAGAGTT+CGG | - | chr1_1:62289269-62289288 | Msa0034350:CDS | 30.0% |
| CAATGGATATGGATGATAAA+AGG | - | chr1_1:62289526-62289545 | Msa0034350:CDS | 30.0% | |
| ! | TTTTGGTGAAGTCATAACTT+TGG | - | chr1_1:62289602-62289621 | Msa0034350:CDS | 30.0% |
| ! | AAATAAGTATGACTTGCCAT+TGG | - | chr1_1:62289641-62289660 | Msa0034350:CDS | 30.0% |
| ATAAAATAGTCTGACCATGA+TGG | + | chr1_1:62289686-62289705 | None:intergenic | 30.0% | |
| ! | TCATGGTCAGACTATTTTAT+TGG | - | chr1_1:62289686-62289705 | Msa0034350:CDS | 30.0% |
| ! | CATGGTCAGACTATTTTATT+GGG | - | chr1_1:62289687-62289706 | Msa0034350:CDS | 30.0% |
| ! | ATGGTCAGACTATTTTATTG+GGG | - | chr1_1:62289688-62289707 | Msa0034350:CDS | 30.0% |
| AGCAATGAAAAATGCAATTG+AGG | - | chr1_1:62289821-62289840 | Msa0034350:CDS | 30.0% | |
| ! | TGTATGTGAAAGACACATTT+TGG | - | chr1_1:62290084-62290103 | Msa0034350:CDS | 30.0% |
| ! | GTATGTGAAAGACACATTTT+GGG | - | chr1_1:62290085-62290104 | Msa0034350:CDS | 30.0% |
| TAAAATCGAAAAGGAAAGCA+TGG | - | chr1_1:62290223-62290242 | Msa0034350:CDS | 30.0% | |
| AATTAAAGACGTGGTGTTTA+AGG | - | chr1_1:62290451-62290470 | Msa0034350:CDS | 30.0% | |
| CGTGGCAAAATATAAAAAGA+CGG | + | chr1_1:62290596-62290615 | None:intergenic | 30.0% | |
| ! | CGTCTTTTTATATTTTGCCA+CGG | - | chr1_1:62290594-62290613 | Msa0034350:CDS | 30.0% |
| AGAATTGCAACGTGTTAATA+TGG | - | chr1_1:62290667-62290686 | Msa0034350:CDS | 30.0% | |
| AGTAGAAGCAACTTCATAAA+AGG | + | chr1_1:62290702-62290721 | None:intergenic | 30.0% | |
| ATTTACAGAAAGTGATGAAC+AGG | - | chr1_1:62290741-62290760 | Msa0034350:CDS | 30.0% | |
| !!! | TTATTTTCCTTGCTGTTCTT+TGG | + | chr1_1:62290962-62290981 | None:intergenic | 30.0% |
| !!! | GTCTGATTTTGGGTTTTTTA+TGG | - | chr1_1:62291087-62291106 | Msa0034350:CDS | 30.0% |
| !!! | ATTTTGGGTTTTTTATGGCA+GGG | - | chr1_1:62291092-62291111 | Msa0034350:CDS | 30.0% |
| ! | GATTATTTCTTGTGGTAACA+TGG | - | chr1_1:62291332-62291351 | Msa0034350:CDS | 30.0% |
| GAATTGTGAAGCGATGAAAA+CGG | + | chr1_1:62288564-62288583 | None:intergenic | 35.0% | |
| AAAGAATTCTTCGAACGCTA+CGG | + | chr1_1:62288631-62288650 | None:intergenic | 35.0% | |
| CATTCGTCTGAAGAAGAATT+AGG | + | chr1_1:62288676-62288695 | None:intergenic | 35.0% | |
| AAGATGAAGAACCTAGAACT+GGG | - | chr1_1:62288944-62288963 | Msa0034350:CDS | 35.0% | |
| GGTCTGAAGAAGAAGTTATT+AGG | - | chr1_1:62288977-62288996 | Msa0034350:intron | 35.0% | |
| ATGAATTACGCTAATCGTGT+AGG | - | chr1_1:62289006-62289025 | Msa0034350:intron | 35.0% | |
| TAGCATGTAATTGTGCAAGA+AGG | - | chr1_1:62289088-62289107 | Msa0034350:CDS | 35.0% | |
| !! | AATGCTTGTGTAGCTTTAGA+TGG | - | chr1_1:62289180-62289199 | Msa0034350:intron | 35.0% |
| TTTAGATTGGATGAGAGTTC+GGG | - | chr1_1:62289270-62289289 | Msa0034350:CDS | 35.0% | |
| !! | AGTTCTAAATTCCTCTCTAC+AGG | + | chr1_1:62289300-62289319 | None:intergenic | 35.0% |
| TTAGAACTCAATGATCAAGG+TGG | - | chr1_1:62289312-62289331 | Msa0034350:CDS | 35.0% | |
| TAGAACTCAATGATCAAGGT+GGG | - | chr1_1:62289313-62289332 | Msa0034350:CDS | 35.0% | |
| TGGTAGAAATCTTCAATCTG+TGG | - | chr1_1:62289344-62289363 | Msa0034350:CDS | 35.0% | |
| GGTAGAAATCTTCAATCTGT+GGG | - | chr1_1:62289345-62289364 | Msa0034350:CDS | 35.0% | |
| ATTCTGTGCAGAAAGTAAGA+CGG | - | chr1_1:62289421-62289440 | Msa0034350:CDS | 35.0% | |
| ! | AGGGCTGCATATGAATATTT+TGG | - | chr1_1:62289585-62289604 | Msa0034350:CDS | 35.0% |
| TGGATGCTAAAACTCTTACT+TGG | - | chr1_1:62289730-62289749 | Msa0034350:CDS | 35.0% | |
| TTACTTGGTTGTTCACAAGA+TGG | - | chr1_1:62289745-62289764 | Msa0034350:CDS | 35.0% | |
| AGATGGTTAGAATGTATGCA+TGG | - | chr1_1:62289762-62289781 | Msa0034350:CDS | 35.0% | |
| TCTTCGGTAATTATGCCATT+TGG | + | chr1_1:62289795-62289814 | None:intergenic | 35.0% | |
| CTTGTGGCATATAATGAAGA+AGG | - | chr1_1:62289875-62289894 | Msa0034350:CDS | 35.0% | |
| AAGAAGGTTCCAGAAATGTT+GGG | - | chr1_1:62289891-62289910 | Msa0034350:CDS | 35.0% | |
| GAGTATTTACCCAACATTTC+TGG | + | chr1_1:62289903-62289922 | None:intergenic | 35.0% | |
| ! | GTCTATCAAAACACTTTTGC+AGG | - | chr1_1:62289932-62289951 | Msa0034350:CDS | 35.0% |
| TCTGAGCAAAAGTGATTTCA+TGG | - | chr1_1:62289971-62289990 | Msa0034350:CDS | 35.0% | |
| AATGTGTCTTTCACATACAC+AGG | + | chr1_1:62290083-62290102 | None:intergenic | 35.0% | |
| ACTCAAAGACAACATTGAAG+CGG | - | chr1_1:62290168-62290187 | Msa0034350:CDS | 35.0% | |
| ! | ATTGCTTGTGTGAGTCATTT+TGG | - | chr1_1:62290272-62290291 | Msa0034350:CDS | 35.0% |
| ! | TGGTAAATGCTTTCTGGAAA+TGG | + | chr1_1:62290307-62290326 | None:intergenic | 35.0% |
| !! | TACTAGCTTTGAAAGATTGG+AGG | - | chr1_1:62290379-62290398 | Msa0034350:CDS | 35.0% |
| ! | CTTTTTATATTTTGCCACGG+TGG | - | chr1_1:62290597-62290616 | Msa0034350:CDS | 35.0% |
| AGTATGTTCTTGTGTAATCC+TGG | + | chr1_1:62290810-62290829 | None:intergenic | 35.0% | |
| CAACAGTAACTCTCAGTAAT+GGG | - | chr1_1:62290864-62290883 | Msa0034350:CDS | 35.0% | |
| !! | GATGTCTTCCTTTTTGAAAG+AGG | + | chr1_1:62290893-62290912 | None:intergenic | 35.0% |
| AAACGATCAAAGTCAAGAAG+AGG | - | chr1_1:62290982-62291001 | Msa0034350:CDS | 35.0% | |
| !!! | GATTTTGGGTTTTTTATGGC+AGG | - | chr1_1:62291091-62291110 | Msa0034350:CDS | 35.0% |
| ACATCTTAGTGATGTAAACC+AGG | - | chr1_1:62291157-62291176 | Msa0034350:CDS | 35.0% | |
| ! | GGTTCTATATTTTCATCACC+TGG | + | chr1_1:62291178-62291197 | None:intergenic | 35.0% |
| GGTGATGAAAATATAGAACC+TGG | - | chr1_1:62291178-62291197 | Msa0034350:CDS | 35.0% | |
| TGATAAAACATCTGTGTCGT+AGG | - | chr1_1:62291243-62291262 | Msa0034350:CDS | 35.0% | |
| GTTCAGAACAGGAAATATTC+TGG | + | chr1_1:62291294-62291313 | None:intergenic | 35.0% | |
| !! | TTCCTGTTCTGAACTTTTAC+AGG | - | chr1_1:62291300-62291319 | Msa0034350:CDS | 35.0% |
| TACCTGTAAAAGTTCAGAAC+AGG | + | chr1_1:62291305-62291324 | None:intergenic | 35.0% | |
| AGGATGGTTGATCATTCTTA+TGG | + | chr1_1:62291419-62291438 | None:intergenic | 35.0% | |
| ATAGCTGCTGTTAAACAAAG+TGG | - | chr1_1:62291480-62291499 | Msa0034350:intron | 35.0% | |
| ATTAGGGCACAGAAACGATT+TGG | + | chr1_1:62288659-62288678 | None:intergenic | 40.0% | |
| TTTGCAGCTGCTATTGTTGT+TGG | - | chr1_1:62288919-62288938 | Msa0034350:CDS | 40.0% | |
| GAAGATGAAGAACCTAGAAC+TGG | - | chr1_1:62288943-62288962 | Msa0034350:CDS | 40.0% | |
| CTAAATGTCATCCCAGTTCT+AGG | + | chr1_1:62288958-62288977 | None:intergenic | 40.0% | |
| CTAGAACTGGGATGACATTT+AGG | - | chr1_1:62288956-62288975 | Msa0034350:intron | 40.0% | |
| ! | TACGCTAATCGTGTAGGTTT+TGG | - | chr1_1:62289012-62289031 | Msa0034350:intron | 40.0% |
| GAGGTAAGATATTGCTTCGA+AGG | + | chr1_1:62289135-62289154 | None:intergenic | 40.0% | |
| TTACCTCGAAAACACAGTGT+AGG | - | chr1_1:62289148-62289167 | Msa0034350:intron | 40.0% | |
| TACCTCGAAAACACAGTGTA+GGG | - | chr1_1:62289149-62289168 | Msa0034350:intron | 40.0% | |
| ! | CAATCTAAAATACCGTCCTC+TGG | + | chr1_1:62289259-62289278 | None:intergenic | 40.0% |
| !! | CAGAGGACGGTATTTTAGAT+TGG | - | chr1_1:62289257-62289276 | Msa0034350:CDS | 40.0% |
| TTAGATTGGATGAGAGTTCG+GGG | - | chr1_1:62289271-62289290 | Msa0034350:CDS | 40.0% | |
| TCTAAATTCCTCTCTACAGG+AGG | + | chr1_1:62289297-62289316 | None:intergenic | 40.0% | |
| GATCAAGGTGGGATTAATGT+TGG | - | chr1_1:62289324-62289343 | Msa0034350:CDS | 40.0% | |
| AAAGTAAGACGGCTAAGACT+TGG | - | chr1_1:62289432-62289451 | Msa0034350:CDS | 40.0% | |
| AAGTAAGACGGCTAAGACTT+GGG | - | chr1_1:62289433-62289452 | Msa0034350:CDS | 40.0% | |
| TGATGGTTCACTCCAACAAA+GGG | + | chr1_1:62289669-62289688 | None:intergenic | 40.0% | |
| ATGATGGTTCACTCCAACAA+AGG | + | chr1_1:62289670-62289689 | None:intergenic | 40.0% | |
| TTTGTTGGAGTGAACCATCA+TGG | - | chr1_1:62289669-62289688 | Msa0034350:CDS | 40.0% | |
| GAAGAAGGTTCCAGAAATGT+TGG | - | chr1_1:62289890-62289909 | Msa0034350:CDS | 40.0% | |
| ! | CAAAACACTTTTGCAGGATG+TGG | - | chr1_1:62289938-62289957 | Msa0034350:CDS | 40.0% |
| GCAAAAGTGATTTCATGGAG+AGG | - | chr1_1:62289976-62289995 | Msa0034350:CDS | 40.0% | |
| AAAGTGATTTCATGGAGAGG+TGG | - | chr1_1:62289979-62289998 | Msa0034350:CDS | 40.0% | |
| AAGTGATTTCATGGAGAGGT+GGG | - | chr1_1:62289980-62289999 | Msa0034350:CDS | 40.0% | |
| TGGCAATGGTAAATGCTTTC+TGG | + | chr1_1:62290313-62290332 | None:intergenic | 40.0% | |
| CTTTGTGTGCTTAAGCTCAT+TGG | - | chr1_1:62290554-62290573 | Msa0034350:CDS | 40.0% | |
| ! | TTTATATTTTGCCACGGTGG+AGG | - | chr1_1:62290600-62290619 | Msa0034350:CDS | 40.0% |
| GAAAGTGATGAACAGGATCA+AGG | - | chr1_1:62290748-62290767 | Msa0034350:CDS | 40.0% | |
| ATGTTCTTGTGTAATCCTGG+AGG | + | chr1_1:62290807-62290826 | None:intergenic | 40.0% | |
| CCATTACTGAGAGTTACTGT+TGG | + | chr1_1:62290866-62290885 | None:intergenic | 40.0% | |
| CCAACAGTAACTCTCAGTAA+TGG | - | chr1_1:62290863-62290882 | Msa0034350:CDS | 40.0% | |
| ATGGGCATCCTCTTTCAAAA+AGG | - | chr1_1:62290882-62290901 | Msa0034350:CDS | 40.0% | |
| CAAAACTCCAAAGAACAGCA+AGG | - | chr1_1:62290952-62290971 | Msa0034350:CDS | 40.0% | |
| TGCCTGCAAAAAGAACACAT+GGG | + | chr1_1:62291391-62291410 | None:intergenic | 40.0% | |
| ! | GTAAGCTAGAACTTTTGTGC+GGG | + | chr1_1:62291690-62291709 | None:intergenic | 40.0% |
| ! | CGTAAGCTAGAACTTTTGTG+CGG | + | chr1_1:62291691-62291710 | None:intergenic | 40.0% |
| CGTAGAAGAGTAGAGAACGT+GGG | + | chr1_1:62288515-62288534 | None:intergenic | 45.0% | |
| TCGTAGAAGAGTAGAGAACG+TGG | + | chr1_1:62288516-62288535 | None:intergenic | 45.0% | |
| AACGGTGCGATTTGCAGAAA+TGG | + | chr1_1:62288546-62288565 | None:intergenic | 45.0% | |
| ! | GGAAAAAAGTGGTGACGAGA+CGG | + | chr1_1:62288592-62288611 | None:intergenic | 45.0% |
| CATGAACTTGGTCAAACCAG+AGG | - | chr1_1:62289240-62289259 | Msa0034350:CDS | 45.0% | |
| AACTTGGTCAAACCAGAGGA+CGG | - | chr1_1:62289244-62289263 | Msa0034350:CDS | 45.0% | |
| !! | TCTGTGGGTGTTGAGATGAA+TGG | - | chr1_1:62289360-62289379 | Msa0034350:CDS | 45.0% |
| !! | CTGTGGGTGTTGAGATGAAT+GGG | - | chr1_1:62289361-62289380 | Msa0034350:CDS | 45.0% |
| GTGTTGAGATGAATGGGTGT+GGG | - | chr1_1:62289367-62289386 | Msa0034350:CDS | 45.0% | |
| GATGGTTCACTCCAACAAAG+GGG | + | chr1_1:62289668-62289687 | None:intergenic | 45.0% | |
| GTGTGCAATATTGTCGAACG+TGG | - | chr1_1:62289710-62289729 | Msa0034350:CDS | 45.0% | |
| ATGCATGGACATGCTCCAAA+TGG | - | chr1_1:62289777-62289796 | Msa0034350:CDS | 45.0% | |
| !! | TCGATGACGAGCTTTAGGAA+AGG | + | chr1_1:62289850-62289869 | None:intergenic | 45.0% |
| TTCCTAAAGCTCGTCATCGA+TGG | - | chr1_1:62289850-62289869 | Msa0034350:CDS | 45.0% | |
| AGTGATTTCATGGAGAGGTG+GGG | - | chr1_1:62289981-62290000 | Msa0034350:CDS | 45.0% | |
| TCACATACACAGGAACCCAA+CGG | + | chr1_1:62290073-62290092 | None:intergenic | 45.0% | |
| ! | GTGAAAGACACATTTTGGGC+TGG | - | chr1_1:62290089-62290108 | Msa0034350:CDS | 45.0% |
| GACAACATTGAAGCGGTTTG+TGG | - | chr1_1:62290175-62290194 | Msa0034350:CDS | 45.0% | |
| TTTACATACTTCCTCCACCG+TGG | + | chr1_1:62290614-62290633 | None:intergenic | 45.0% | |
| ! | GGTGGAGGAAGTATGTAAAG+CGG | - | chr1_1:62290615-62290634 | Msa0034350:CDS | 45.0% |
| TCTTGTGTAATCCTGGAGGA+TGG | + | chr1_1:62290803-62290822 | None:intergenic | 45.0% | |
| ACAATCCTAGTCACGTGGTT+TGG | + | chr1_1:62290839-62290858 | None:intergenic | 45.0% | |
| GATCAACAATCCTAGTCACG+TGG | + | chr1_1:62290844-62290863 | None:intergenic | 45.0% | |
| ! | TGCCCATGTGTTCTTTTTGC+AGG | - | chr1_1:62291386-62291405 | Msa0034350:intron | 45.0% |
| GTGCCTGCAAAAAGAACACA+TGG | + | chr1_1:62291392-62291411 | None:intergenic | 45.0% | |
| GGTCTATGTCTTTACGAGGA+TGG | + | chr1_1:62291435-62291454 | None:intergenic | 45.0% | |
| !! | GGTTGGTCTATGTCTTTACG+AGG | + | chr1_1:62291439-62291458 | None:intergenic | 45.0% |
| ACATAGACCAACCACTACTC+TGG | - | chr1_1:62291446-62291465 | Msa0034350:intron | 45.0% | |
| GTTGCGGAAGCGGAAAAAAG+TGG | + | chr1_1:62288603-62288622 | None:intergenic | 50.0% | |
| GAATTCTTCGAACGCTACGG+TGG | + | chr1_1:62288628-62288647 | None:intergenic | 50.0% | |
| ! | AGCCCTACACTGTGTTTTCG+AGG | + | chr1_1:62289154-62289173 | None:intergenic | 50.0% |
| CGAAAACACAGTGTAGGGCT+AGG | - | chr1_1:62289154-62289173 | Msa0034350:intron | 50.0% | |
| ! | GGTGTTGAGATGAATGGGTG+TGG | - | chr1_1:62289366-62289385 | Msa0034350:CDS | 50.0% |
| GGGTGTGGGAATCTTACTTC+TGG | - | chr1_1:62289381-62289400 | Msa0034350:CDS | 50.0% | |
| TTTGGGCAGATGCGAGATGT+AGG | - | chr1_1:62289565-62289584 | Msa0034350:CDS | 50.0% | |
| TTGGGCAGATGCGAGATGTA+GGG | - | chr1_1:62289566-62289585 | Msa0034350:CDS | 50.0% | |
| TTGCCATTGGTCCCCTTTGT+TGG | - | chr1_1:62289654-62289673 | Msa0034350:CDS | 50.0% | |
| ACTCCAACAAAGGGGACCAA+TGG | + | chr1_1:62289660-62289679 | None:intergenic | 50.0% | |
| CACCATCGATGACGAGCTTT+AGG | + | chr1_1:62289855-62289874 | None:intergenic | 50.0% | |
| TATTTGATGAGCGGCACCGT+TGG | - | chr1_1:62290054-62290073 | Msa0034350:CDS | 50.0% | |
| ATTTGATGAGCGGCACCGTT+GGG | - | chr1_1:62290055-62290074 | Msa0034350:CDS | 50.0% | |
| ! | CTGGAATGTCGACTGCACAA+CGG | - | chr1_1:62290108-62290127 | Msa0034350:CDS | 50.0% |
| ! | CTTCTAAAGAGCCATCCTCC+AGG | - | chr1_1:62290789-62290808 | Msa0034350:CDS | 50.0% |
| CAACTCCAAACCACGTGACT+AGG | - | chr1_1:62290831-62290850 | Msa0034350:CDS | 50.0% | |
| ACCAACCACTACTCTGGACA+TGG | - | chr1_1:62291452-62291471 | Msa0034350:intron | 50.0% | |
| ACCATGTCCAGAGTAGTGGT+TGG | + | chr1_1:62291456-62291475 | None:intergenic | 50.0% | |
| AACCACTACTCTGGACATGG+TGG | - | chr1_1:62291455-62291474 | Msa0034350:intron | 50.0% | |
| AACCACCATGTCCAGAGTAG+TGG | + | chr1_1:62291460-62291479 | None:intergenic | 50.0% | |
| GTAGAGAACGTGGGTTCGTG+AGG | + | chr1_1:62288506-62288525 | None:intergenic | 55.0% | |
| ! | AAGTGGTGACGAGACGGTTG+TGG | + | chr1_1:62288586-62288605 | None:intergenic | 55.0% |
| TTCTTCGAACGCTACGGTGG+TGG | + | chr1_1:62288625-62288644 | None:intergenic | 55.0% | |
| AGACGGCTAAGACTTGGGAG+AGG | - | chr1_1:62289438-62289457 | Msa0034350:CDS | 55.0% | |
| CTCGTCATCGATGGTGCTTG+TGG | - | chr1_1:62289859-62289878 | Msa0034350:CDS | 55.0% | |
| ! | TACGGTGGTGGTTGCGGAAG+CGG | + | chr1_1:62288613-62288632 | None:intergenic | 60.0% |
| ! | GAACGCTACGGTGGTGGTTG+CGG | + | chr1_1:62288619-62288638 | None:intergenic | 60.0% |
| GTTCGGGGCCTCCTGTAGAG+AGG | - | chr1_1:62289286-62289305 | Msa0034350:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 62288485 | 62291745 | 62288485 | ID=Msa0034350;Name=Msa0034350 |
| chr1_1 | mRNA | 62288485 | 62291745 | 62288485 | ID=Msa0034350-mRNA-1;Parent=Msa0034350;Name=Msa0034350-mRNA-1;_AED=0.00;_eAED=0.00;_QI=226|1|1|1|0.75|0.8|5|302|770 |
| chr1_1 | exon | 62288485 | 62288822 | 62288485 | ID=Msa0034350-mRNA-1:exon:19689;Parent=Msa0034350-mRNA-1 |
| chr1_1 | exon | 62288909 | 62288965 | 62288909 | ID=Msa0034350-mRNA-1:exon:19688;Parent=Msa0034350-mRNA-1 |
| chr1_1 | exon | 62289052 | 62289117 | 62289052 | ID=Msa0034350-mRNA-1:exon:19687;Parent=Msa0034350-mRNA-1 |
| chr1_1 | exon | 62289227 | 62291379 | 62289227 | ID=Msa0034350-mRNA-1:exon:19686;Parent=Msa0034350-mRNA-1 |
| chr1_1 | exon | 62291519 | 62291745 | 62291519 | ID=Msa0034350-mRNA-1:exon:19685;Parent=Msa0034350-mRNA-1 |
| chr1_1 | five_prime_UTR | 62291520 | 62291745 | 62291520 | ID=Msa0034350-mRNA-1:five_prime_utr;Parent=Msa0034350-mRNA-1 |
| chr1_1 | CDS | 62291519 | 62291519 | 62291519 | ID=Msa0034350-mRNA-1:cds;Parent=Msa0034350-mRNA-1 |
| chr1_1 | CDS | 62289227 | 62291379 | 62289227 | ID=Msa0034350-mRNA-1:cds;Parent=Msa0034350-mRNA-1 |
| chr1_1 | CDS | 62289052 | 62289117 | 62289052 | ID=Msa0034350-mRNA-1:cds;Parent=Msa0034350-mRNA-1 |
| chr1_1 | CDS | 62288909 | 62288965 | 62288909 | ID=Msa0034350-mRNA-1:cds;Parent=Msa0034350-mRNA-1 |
| chr1_1 | CDS | 62288787 | 62288822 | 62288787 | ID=Msa0034350-mRNA-1:cds;Parent=Msa0034350-mRNA-1 |
| chr1_1 | three_prime_UTR | 62288485 | 62288786 | 62288485 | ID=Msa0034350-mRNA-1:three_prime_utr;Parent=Msa0034350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
