AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1256250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1256250 MtrunA17_Chr4g0053181 95.985 523 14 4 1 518 1 521 0.0 1033
Msa1256250 MtrunA17_Chr5g0401891 69.853 544 105 20 1 518 1 511 0.0 598
Msa1256250 MtrunA17_Chr7g0263581 81.218 197 35 1 153 349 120 314 3.01e-95 297
Msa1256250 MtrunA17_Chr4g0030191 56.782 317 96 6 40 355 36 312 8.05e-93 291
Msa1256250 MtrunA17_Chr2g0325911 53.822 314 103 7 40 352 25 297 2.32e-81 260
Msa1256250 MtrunA17_Chr4g0054351 54.971 171 66 3 169 328 310 480 1.08e-52 189
Msa1256250 MtrunA17_Chr4g0054351 41.758 91 50 2 159 246 402 492 2.09e-11 66.6
Msa1256250 MtrunA17_Chr4g0072291 51.031 194 84 3 144 326 134 327 8.84e-52 184
Msa1256250 MtrunA17_Chr5g0400871 54.386 171 67 3 169 328 249 419 1.75e-51 184
Msa1256250 MtrunA17_Chr7g0216601 52.976 168 68 2 169 325 65 232 1.28e-50 178
Msa1256250 MtrunA17_Chr4g0032631 40.293 273 126 8 141 386 128 390 3.86e-50 180
Msa1256250 MtrunA17_Chr7g0249621 53.846 169 67 3 169 326 259 427 1.66e-49 181
Msa1256250 MtrunA17_Chr3g0135161 54.167 168 69 3 169 328 310 477 3.14e-49 179
Msa1256250 MtrunA17_Chr8g0355191 46.429 224 96 5 137 339 20 240 2.35e-48 172
Msa1256250 MtrunA17_Chr3g0126151 80.851 94 18 0 210 303 47 140 4.29e-48 163
Msa1256250 MtrunA17_Chr8g0343851 50.538 186 83 4 150 326 228 413 4.58e-48 175
Msa1256250 MtrunA17_Chr1g0170761 42.271 317 125 12 39 349 34 298 8.71e-48 170
Msa1256250 MtrunA17_Chr1g0152161 52.976 168 71 3 169 328 312 479 1.08e-47 175
Msa1256250 MtrunA17_Chr4g0002011 49.519 208 84 4 163 349 30 237 4.03e-47 166
Msa1256250 MtrunA17_Chr6g0452911 47.396 192 83 4 173 346 65 256 7.96e-47 167
Msa1256250 MtrunA17_Chr2g0328971 46.078 204 86 5 169 361 167 357 4.08e-46 169
Msa1256250 MtrunA17_Chr4g0073521 50.000 174 73 4 163 325 41 211 1.83e-45 163
Msa1256250 MtrunA17_Chr8g0355181 46.829 205 95 3 150 340 37 241 2.56e-44 160
Msa1256250 MtrunA17_Chr5g0412151 53.801 171 68 3 169 328 224 394 4.11e-43 160
Msa1256250 MtrunA17_Chr8g0367311 44.330 194 102 2 196 388 19 207 8.44e-43 152
Msa1256250 MtrunA17_Chr8g0362541 36.086 327 154 10 138 422 38 351 9.29e-39 146
Msa1256250 MtrunA17_Chr7g0257361 49.231 130 52 2 169 288 57 182 1.67e-24 105
Msa1256250 MtrunA17_Chr2g0305821 44.800 125 57 3 159 271 32 156 1.61e-18 82.8
Msa1256250 MtrunA17_Chr2g0305831 60.000 55 22 0 271 325 5 59 7.64e-14 70.9
Msa1256250 MtrunA17_Chr8g0375031 29.412 221 129 7 35 248 3 203 2.72e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1256250 AT4G36920.1 52.996 534 133 19 1 518 1 432 1.84e-130 386
Msa1256250 AT4G36920.2 52.996 534 133 19 1 518 1 432 1.84e-130 386
Msa1256250 AT5G67180.1 69.697 264 53 4 92 354 39 276 2.56e-103 314
Msa1256250 AT5G67180.2 69.962 263 52 4 93 354 40 276 3.22e-103 312
Msa1256250 AT5G67180.3 72.152 237 41 3 93 328 40 252 7.00e-97 295
Msa1256250 AT2G28550.3 53.977 352 136 7 43 390 40 369 2.81e-93 292
Msa1256250 AT5G67180.4 68.778 221 42 4 92 311 39 233 7.00e-79 248
Msa1256250 AT2G28550.1 50.284 352 134 8 43 390 40 354 1.91e-78 253
Msa1256250 AT2G28550.4 68.075 213 50 4 94 302 85 283 1.21e-77 247
Msa1256250 AT2G28550.2 57.430 249 82 6 43 287 40 268 4.58e-67 218
Msa1256250 AT2G28550.6 57.430 249 82 6 43 287 40 268 4.58e-67 218
Msa1256250 AT5G60120.4 61.111 198 54 2 156 353 144 318 4.54e-63 211
Msa1256250 AT5G60120.3 61.111 198 54 2 156 353 144 318 4.54e-63 211
Msa1256250 AT5G60120.5 61.111 198 54 2 156 353 144 318 4.54e-63 211
Msa1256250 AT5G60120.6 61.111 198 54 2 156 353 144 318 2.12e-62 212
Msa1256250 AT5G60120.1 61.111 198 54 2 156 353 144 318 2.65e-62 212
Msa1256250 AT5G60120.2 61.111 198 54 2 156 353 144 318 6.01e-62 211
Msa1256250 AT2G28550.5 57.426 202 69 2 189 390 4 188 1.76e-55 187
Msa1256250 AT5G57390.2 41.195 318 132 10 144 410 46 359 4.66e-55 191
Msa1256250 AT5G57390.1 41.195 318 132 10 144 410 164 477 2.86e-54 192
Msa1256250 AT1G72570.1 53.254 169 68 3 169 326 220 388 3.59e-51 180
Msa1256250 AT1G72570.1 43.373 83 43 2 159 239 312 392 6.81e-11 64.7
Msa1256250 AT4G37750.1 53.254 169 68 2 169 326 280 448 1.73e-50 181
Msa1256250 AT4G37750.1 44.304 79 42 1 159 235 372 450 4.17e-11 65.9
Msa1256250 AT1G51190.1 53.846 169 67 3 169 326 187 355 2.20e-50 181
Msa1256250 AT3G20840.1 52.663 169 69 3 169 326 178 346 4.40e-49 178
Msa1256250 AT5G17430.2 50.562 178 77 3 160 326 136 313 4.15e-48 174
Msa1256250 AT5G17430.1 50.562 178 77 3 160 326 198 375 6.43e-48 175
Msa1256250 AT2G39250.2 76.636 107 25 0 160 266 96 202 3.35e-47 164
Msa1256250 AT2G39250.1 52.020 198 63 4 160 356 96 262 1.07e-46 166
Msa1256250 AT5G65510.4 51.546 194 80 5 169 348 170 363 2.43e-44 162
Msa1256250 AT5G65510.2 51.546 194 80 5 169 348 228 421 4.56e-44 163
Msa1256250 AT5G65510.1 51.546 194 80 5 169 348 228 421 4.56e-44 163
Msa1256250 AT3G54320.3 53.488 172 69 2 169 329 62 233 7.78e-44 160
Msa1256250 AT3G54320.1 53.488 172 69 2 169 329 62 233 9.00e-44 160
Msa1256250 AT5G10510.7 50.739 203 84 6 169 356 227 428 3.21e-43 161
Msa1256250 AT5G10510.5 50.739 203 84 6 169 356 227 428 3.21e-43 161
Msa1256250 AT3G54990.2 72.000 125 35 0 154 278 104 228 3.34e-43 154
Msa1256250 AT5G10510.1 50.739 203 84 6 169 356 250 451 6.40e-43 161
Msa1256250 AT5G10510.6 50.739 203 84 6 169 356 265 466 6.74e-43 161
Msa1256250 AT5G10510.4 50.739 203 84 6 169 356 265 466 6.74e-43 161
Msa1256250 AT3G54990.1 62.893 159 45 2 154 312 104 248 7.34e-43 156
Msa1256250 AT1G79700.2 53.409 176 71 2 163 327 43 218 6.21e-39 144
Msa1256250 AT5G10510.2 49.261 203 84 7 169 356 227 425 7.95e-39 149
Msa1256250 AT5G65510.3 51.825 137 55 3 169 294 170 306 2.13e-38 143
Msa1256250 AT1G16060.1 53.039 181 70 3 156 325 46 222 1.71e-37 141
Msa1256250 AT5G10510.3 44.843 223 87 7 169 356 265 486 3.07e-36 142
Msa1256250 AT3G54320.4 54.074 135 61 1 196 329 33 167 5.25e-32 126
Msa1256250 AT3G54320.5 54.074 135 61 1 196 329 33 167 5.25e-32 126
Msa1256250 AT1G79700.1 50.568 176 66 3 163 327 43 208 8.57e-32 124
Msa1256250 AT1G79700.3 54.348 138 62 1 191 327 5 142 1.39e-27 111
Msa1256250 AT1G16060.3 55.147 136 60 1 191 325 17 152 9.59e-27 109
Msa1256250 AT1G79700.4 54.198 131 59 1 198 327 6 136 2.03e-25 105
Msa1256250 AT2G41710.1 49.231 130 52 2 169 288 67 192 2.14e-24 105
Msa1256250 AT2G41710.4 49.231 130 52 2 169 288 67 192 3.32e-24 105
Msa1256250 AT2G41710.2 47.407 135 52 3 169 288 67 197 3.30e-22 99.8
Msa1256250 AT3G54320.2 58.696 92 37 1 239 329 1 92 8.44e-20 90.1
Msa1256250 AT2G41710.3 46.667 120 50 2 179 288 112 227 1.84e-19 91.7
Msa1256250 AT1G16060.2 57.955 88 36 1 239 325 1 88 8.84e-18 82.4
Msa1256250 AT1G16060.4 57.955 88 36 1 239 325 1 88 8.84e-18 82.4
Msa1256250 AT1G16060.6 57.955 88 36 1 239 325 1 88 8.84e-18 82.4
Msa1256250 AT1G16060.5 57.955 88 36 1 239 325 1 88 8.84e-18 82.4
Msa1256250 AT3G25730.1 36.207 116 68 3 142 255 32 143 3.20e-11 65.1
Msa1256250 AT1G03800.1 41.071 112 55 4 264 366 52 161 3.46e-11 63.9
Msa1256250 AT2G47520.1 44.444 90 45 3 150 235 25 113 7.09e-11 61.6

Find 119 sgRNAs with CRISPR-Local

Find 206 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGTCTATTATATGGTTT+TGG 0.153032 8_2:+56065942 None:intergenic
TGAATGTAAAACGGTTAAAT+AGG 0.159103 8_2:+56065011 None:intergenic
ATTCACTAGGTACGTTTATC+TGG 0.170714 8_2:-56066553 Msa1256250:intron
ACTTTGTTTCTTTGGTTCTT+TGG 0.170788 8_2:+56068014 None:intergenic
GAACCAAAACTTTGTTTCTT+TGG 0.177683 8_2:+56068006 None:intergenic
AAAAGAAACAGTAAGATATT+TGG 0.204737 8_2:-56067721 Msa1256250:CDS
CTAATAAAATTAAGAAAATA+AGG 0.205635 8_2:+56064955 None:intergenic
ATATCTACAATTAGATATTA+TGG 0.219125 8_2:-56064821 Msa1256250:three_prime_UTR
CACAATTTGGATTTAAGTTT+GGG 0.236642 8_2:-56066180 Msa1256250:CDS
ATATTGTTTGGTCTATTATA+TGG 0.284756 8_2:+56065936 None:intergenic
TAACGCTGGTGATCACAATT+TGG 0.289765 8_2:-56066193 Msa1256250:CDS
TCACAATTTGGATTTAAGTT+TGG 0.292491 8_2:-56066181 Msa1256250:CDS
GGAACTCATTAGTCATAGTT+TGG 0.296691 8_2:-56064868 Msa1256250:three_prime_UTR
CCATATGCTTCCATATTGTT+TGG 0.297515 8_2:+56065924 None:intergenic
AATTTGAATGCAATGTTAGA+AGG 0.303144 8_2:-56064924 Msa1256250:three_prime_UTR
CAAGCTTGGCAGCACATAAA+TGG 0.312102 8_2:-56065064 Msa1256250:CDS
AGAGTACCCACATGAAAATT+TGG 0.316290 8_2:+56065759 None:intergenic
ATGCATCTGATCAATCTAAT+TGG 0.325045 8_2:-56066116 Msa1256250:CDS
GAGATGAAGATAAAGCAAAA+AGG 0.330561 8_2:-56067840 Msa1256250:CDS
GAACCAAAGAAACAAAGTTT+TGG 0.339964 8_2:-56068009 Msa1256250:five_prime_UTR
TCGGCTAACATTGCTGAAAC+TGG 0.340167 8_2:-56068266 Msa1256250:five_prime_UTR
GAATGTAAAACGGTTAAATA+GGG 0.340722 8_2:+56065012 None:intergenic
AGAGAGAGTGAATGGTGTTA+AGG 0.343459 8_2:-56068305 Msa1256250:five_prime_UTR
AAGGTAAAAGAAGGTGATTT+TGG 0.344206 8_2:+56068043 None:intergenic
ATTTGTGACTGATCTCTAAA+AGG 0.350712 8_2:+56065810 None:intergenic
GACAACGAGCTTAATAATTC+TGG 0.352333 8_2:-56066337 Msa1256250:intron
AGAGCAGCTATTAAGTTTAG+AGG 0.357329 8_2:-56066935 Msa1256250:CDS
ATATATGCTTGGATCAAAAT+TGG 0.369931 8_2:+56066360 None:intergenic
TTTGCTTGAGTATCATTGAT+AGG 0.379424 8_2:+56066141 None:intergenic
TGATCACCAGCGTTACTTGC+TGG 0.382899 8_2:+56066201 None:intergenic
CAACAACAACAATGGCAATC+AGG 0.383189 8_2:-56065160 Msa1256250:CDS
GCATCTTCATGTGGTGGAAA+TGG 0.384567 8_2:-56067589 Msa1256250:CDS
GTCGATGGGAATCACATATA+TGG 0.385048 8_2:-56067372 Msa1256250:intron
TGGCCTCGTCTATGCTGTAT+TGG 0.393292 8_2:-56068246 Msa1256250:five_prime_UTR
ATATAATAGACCAAACAATA+TGG 0.404545 8_2:-56065934 Msa1256250:CDS
GGATCAAGAGTCTGATGATA+TGG 0.408466 8_2:-56067617 Msa1256250:CDS
ACTGCTGCTGCAGCATCATC+AGG 0.408622 8_2:-56065121 Msa1256250:CDS
AGGTGAAGTTGAGATGCTTT+CGG 0.421973 8_2:-56068285 Msa1256250:five_prime_UTR
CCAAACAATATGGAAGCATA+TGG 0.430711 8_2:-56065924 Msa1256250:CDS
TGGAAGATGGGAGGCAAGAA+TGG 0.436163 8_2:-56066661 Msa1256250:CDS
ATCAATCTAATTGGCAGCAT+GGG 0.439853 8_2:-56066107 Msa1256250:CDS
TGCAACACCTACCTCTTCAC+TGG 0.441140 8_2:-56068176 Msa1256250:five_prime_UTR
CACCCTCTTCTTCTCAAGCT+TGG 0.454258 8_2:-56065078 Msa1256250:CDS
TTCACTAGGTACGTTTATCT+GGG 0.456768 8_2:-56066552 Msa1256250:intron
GGCCTCGTCTATGCTGTATT+GGG 0.457225 8_2:-56068245 Msa1256250:five_prime_UTR
CCTACCTCTTCACTGGTCCT+AGG 0.457383 8_2:-56068169 Msa1256250:five_prime_UTR
TCGGCTTCCATAGCTGCTGC+TGG 0.457470 8_2:+56065222 None:intergenic
CTATATTTAGAGCTTCCTCT+TGG 0.461670 8_2:+56066705 None:intergenic
GAGTAGTTGTCAAGTGAAAG+AGG 0.464682 8_2:+56068105 None:intergenic
AGCTCGTTGTCATATATGCT+TGG 0.465069 8_2:+56066349 None:intergenic
GAAGAGGGTGGTCTAATTTG+AGG 0.465254 8_2:+56065091 None:intergenic
TAGTTTCCCAGCAGCAGCTA+TGG 0.477925 8_2:-56065229 Msa1256250:CDS
TATTGTGAACTTCTTGACCT+TGG 0.483752 8_2:+56067424 None:intergenic
TAATAAAATTAAGAAAATAA+GGG 0.485483 8_2:+56064956 None:intergenic
TGTGGAAAACAAGTGTATCT+TGG 0.489731 8_2:-56067250 Msa1256250:intron
TTTCCTCGTGCTCATTGGGT+AGG 0.490632 8_2:-56067544 Msa1256250:CDS
ATGTTTATTTGAATGTAAAA+CGG 0.493428 8_2:+56065002 None:intergenic
TTATGAAGAAGATTTAAAGC+AGG 0.500170 8_2:-56066879 Msa1256250:intron
AATAAAATGCAATGGTAAAG+AGG 0.502814 8_2:-56066389 Msa1256250:CDS
CATTGCACAAATGTGGAAGA+TGG 0.503002 8_2:-56066674 Msa1256250:CDS
AAAGAGGTTGAGTGTGATGA+TGG 0.507642 8_2:+56068121 None:intergenic
ATTTGAATGCAATGTTAGAA+GGG 0.507815 8_2:-56064923 Msa1256250:three_prime_UTR
CATTTGATGATGAAGAATGA+AGG 0.508677 8_2:+56065850 None:intergenic
AGCAGCTATGGAAGCCGAGT+TGG 0.511638 8_2:-56065217 Msa1256250:CDS
TCAAGAAGTTCACAATATAG+AGG 0.514827 8_2:-56067418 Msa1256250:CDS
TCTCATAATTGCAGGGATTG+TGG 0.516374 8_2:-56067268 Msa1256250:intron
AACAACAACAATGGCAATCA+GGG 0.519302 8_2:-56065159 Msa1256250:CDS
TCATCAGACTCTTGATCCAT+AGG 0.519737 8_2:+56067622 None:intergenic
GGATGTTCTTCACTCAAAGA+TGG 0.534996 8_2:-56067862 Msa1256250:CDS
GGATGAGTCAAACTAACAAA+CGG 0.538684 8_2:-56064847 Msa1256250:three_prime_UTR
TTTACAGAAGAACAGGTCGA+TGG 0.544216 8_2:-56067387 Msa1256250:CDS
GATCAATCTAATTGGCAGCA+TGG 0.545229 8_2:-56066108 Msa1256250:CDS
AGAGGAAGCTCTAAATATAG+AGG 0.546165 8_2:-56066702 Msa1256250:CDS
CGGCTTCCATAGCTGCTGCT+GGG 0.549582 8_2:+56065223 None:intergenic
ACGGTTAAATAGGGATCAAG+AGG 0.556646 8_2:+56065021 None:intergenic
GGAAGATGGGAGGCAAGAAT+GGG 0.561290 8_2:-56066660 Msa1256250:CDS
GAGGGTGGTCTAATTTGAGG+TGG 0.565751 8_2:+56065094 None:intergenic
ATTGCACAAATGTGGAAGAT+GGG 0.567084 8_2:-56066673 Msa1256250:CDS
CAATCAGAAACACTTGGAGG+TGG 0.568158 8_2:-56067508 Msa1256250:CDS
GTACTTCGTCGACAAAGCAC+TGG 0.569473 8_2:-56066732 Msa1256250:CDS
CCTATGAAGAAAAGTAGAAG+AGG 0.570500 8_2:-56067448 Msa1256250:CDS
TTACAGAAGAACAGGTCGAT+GGG 0.572290 8_2:-56067386 Msa1256250:CDS
ACACGGCACATGCAGCTGCT+CGG 0.573654 8_2:-56067054 Msa1256250:intron
ACAATATGGAAGCATATGGA+AGG 0.574740 8_2:-56065920 Msa1256250:CDS
GGTGTTACATTGCACAAATG+TGG 0.575043 8_2:-56066681 Msa1256250:CDS
TGTCAATCAGAAACACTTGG+AGG 0.577906 8_2:-56067511 Msa1256250:CDS
AGGGTGGTCTAATTTGAGGT+GGG 0.578261 8_2:+56065095 None:intergenic
TCAATCTAATTGGCAGCATG+GGG 0.594017 8_2:-56066106 Msa1256250:CDS
AAGAGGTTGAGTGTGATGAT+GGG 0.598585 8_2:+56068122 None:intergenic
ACACTGAGGTTGAAGCTGCA+AGG 0.600079 8_2:-56066521 Msa1256250:intron
ATGAAAGATCACTTCCAACT+CGG 0.600183 8_2:+56065203 None:intergenic
AAAGCAGCAATAAAATGCAA+TGG 0.607563 8_2:-56066397 Msa1256250:CDS
TCTGGGCTTGTTTGACACTG+AGG 0.608889 8_2:-56066535 Msa1256250:CDS
GTTATAGCATCTTCATGTGG+TGG 0.609279 8_2:-56067595 Msa1256250:CDS
CTGCCAAGCTTGAGAAGAAG+AGG 0.614697 8_2:+56065075 None:intergenic
GCAGAACCAGCAAGTAACGC+TGG 0.616195 8_2:-56066207 Msa1256250:CDS
GCATATGGAAGGGATTTGCA+TGG 0.618990 8_2:-56065909 Msa1256250:CDS
CAATATGGAAGCATATGGAA+GGG 0.623025 8_2:-56065919 Msa1256250:CDS
GCTTGGATCAAAATTGGTGA+CGG 0.623409 8_2:+56066366 None:intergenic
AAGAGGGTCTCATGAGATTG+CGG 0.624464 8_2:+56065038 None:intergenic
GCAGCAGTTGCTAAATAATG+TGG 0.624566 8_2:+56065136 None:intergenic
TTGTATAGGTGGATTTGACA+CGG 0.625616 8_2:-56067071 Msa1256250:intron
ATCATCATCAACAACAACAA+TGG 0.626378 8_2:-56065168 Msa1256250:CDS
ATGTTAGAAGGGATAGCAAG+AGG 0.630113 8_2:-56064912 Msa1256250:three_prime_UTR
CAAACCTAGGACCAGTGAAG+AGG 0.630498 8_2:+56068165 None:intergenic
GTACCCACATGAAAATTTGG+TGG 0.636697 8_2:+56065762 None:intergenic
TACCCACATGAAAATTTGGT+GGG 0.637961 8_2:+56065763 None:intergenic
GCACAAATGTGGAAGATGGG+AGG 0.665861 8_2:-56066670 Msa1256250:CDS
CCTAGGACCAGTGAAGAGGT+AGG 0.670118 8_2:+56068169 None:intergenic
ATGGAGAGAGTGAAGCATTG+AGG 0.677397 8_2:-56065890 Msa1256250:CDS
CAAGCTTGAGAAGAAGAGGG+TGG 0.678347 8_2:+56065079 None:intergenic
CGGTTAAATAGGGATCAAGA+GGG 0.690526 8_2:+56065022 None:intergenic
AGGGTCTCATGAGATTGCGG+AGG 0.691450 8_2:+56065041 None:intergenic
AGAAAAGTAGAAGAGGACCA+AGG 0.691660 8_2:-56067441 Msa1256250:CDS
TGCCAAGCTTGAGAAGAAGA+GGG 0.692321 8_2:+56065076 None:intergenic
ACACCTACCCAATGAGCACG+AGG 0.695607 8_2:+56067541 None:intergenic
ATGGTTATAGCATCTTCATG+TGG 0.723044 8_2:-56067598 Msa1256250:CDS
CAATCTAATTGGCAGCATGG+GGG 0.724886 8_2:-56066105 Msa1256250:CDS
TGCCCAATACAGCATAGACG+AGG 0.728914 8_2:+56068243 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAGAATCAATTTTTTTTA+AGG + chr8_2:56065751-56065770 None:intergenic 10.0%
!!! ATTTTATTTAATTTCAGTTA+TGG - chr8_2:56066044-56066063 Msa1256250:intron 10.0%
!!! TTTTATTTAATTTCAGTTAT+GGG - chr8_2:56066045-56066064 Msa1256250:intron 10.0%
!!! TGAAATTGAATTAATTTTTT+TGG - chr8_2:56066241-56066260 Msa1256250:intron 10.0%
!! CTAATAAAATTAAGAAAATA+AGG + chr8_2:56068095-56068114 None:intergenic 10.0%
!! AAAAACAAAAAATCTAAATT+GGG - chr8_2:56068158-56068177 Msa1256250:five_prime_UTR 10.0%
!!! TTTTAAGGTTTACATTTTTA+AGG + chr8_2:56065736-56065755 None:intergenic 15.0%
!!! GAATAATTGTTGTATTATTT+TGG - chr8_2:56065855-56065874 Msa1256250:CDS 15.0%
!!! TTTATTTAATTTCAGTTATG+GGG - chr8_2:56066046-56066065 Msa1256250:intron 15.0%
!!! GTTATAACATGATTAATTTT+AGG - chr8_2:56066577-56066596 Msa1256250:intron 15.0%
!! TTTAAATAATATTACACCTT+AGG + chr8_2:56066975-56066994 None:intergenic 15.0%
!! TTTATATTGACAATAAAAGT+GGG + chr8_2:56067360-56067379 None:intergenic 15.0%
!! ATTTATATTGACAATAAAAG+TGG + chr8_2:56067361-56067380 None:intergenic 15.0%
!!! AGTTTTTTTCGAAAATATAA+AGG - chr8_2:56067676-56067695 Msa1256250:CDS 15.0%
!!! TGTAAGTACATTTTTTTTTT+TGG - chr8_2:56067789-56067808 Msa1256250:CDS 15.0%
!! ATGTTTATTTGAATGTAAAA+CGG + chr8_2:56068048-56068067 None:intergenic 15.0%
!! GAAAAACAAAAAATCTAAAT+TGG - chr8_2:56068157-56068176 Msa1256250:five_prime_UTR 15.0%
!! ATATCTACAATTAGATATTA+TGG - chr8_2:56068226-56068245 Msa1256250:five_prime_UTR 15.0%
!!! TATGATTCATTTTCTTAATT+TGG - chr8_2:56068315-56068334 Msa1256250:five_prime_UTR 15.0%
!!! AGTTTTGCAAAAAAAAAATG+TGG - chr8_2:56065111-56065130 Msa1256250:CDS 20.0%
!!! GTTTTGCAAAAAAAAAATGT+GGG - chr8_2:56065112-56065131 Msa1256250:CDS 20.0%
!! AAAAGAAACAGTAAGATATT+TGG - chr8_2:56065326-56065345 Msa1256250:intron 20.0%
!!! AATTTTTTTTGCTTCTTTTG+TGG - chr8_2:56065881-56065900 Msa1256250:CDS 20.0%
!!! TTATTTAATTTCAGTTATGG+GGG - chr8_2:56066047-56066066 Msa1256250:intron 20.0%
!!! AATTATGATTTTCATTCACT+AGG - chr8_2:56066481-56066500 Msa1256250:intron 20.0%
!!! TAGATGTCATTTTTTACTAT+AGG - chr8_2:56066618-56066637 Msa1256250:intron 20.0%
!!! AGATGTCATTTTTTACTATA+GGG - chr8_2:56066619-56066638 Msa1256250:intron 20.0%
!!! AATTCTGGTATATTTTGTTA+TGG - chr8_2:56066725-56066744 Msa1256250:CDS 20.0%
!! ATATTGTTTGGTCTATTATA+TGG + chr8_2:56067114-56067133 None:intergenic 20.0%
!! ATATAATAGACCAAACAATA+TGG - chr8_2:56067113-56067132 Msa1256250:intron 20.0%
!!! ATTTTTTACTATTATGCATG+AGG + chr8_2:56067328-56067347 None:intergenic 20.0%
!!! ATTAGCATGATTTTAAATTG+TGG - chr8_2:56067381-56067400 Msa1256250:CDS 20.0%
!! ATAGAAAAATGTAGATGATT+CGG + chr8_2:56067656-56067675 None:intergenic 20.0%
!! CAAGAAGAAATTATTGAATA+TGG + chr8_2:56067753-56067772 None:intergenic 20.0%
!!! AGAAAATAAGGGAAAATTTT+AGG + chr8_2:56068083-56068102 None:intergenic 20.0%
! TAGAAGAAAAAATCAAACCT+AGG + chr8_2:56064898-56064917 None:intergenic 25.0%
!!! TTTGGTTGGTTAAGAATTTT+GGG + chr8_2:56064989-56065008 None:intergenic 25.0%
!!! TTTTGGTTGGTTAAGAATTT+TGG + chr8_2:56064990-56065009 None:intergenic 25.0%
! AAAAAAATGTGGGATCTTAA+TGG - chr8_2:56065122-56065141 Msa1256250:CDS 25.0%
!! TGATCTTCTTTTCTCTTAAA+AGG + chr8_2:56065152-56065171 None:intergenic 25.0%
! AGATGAAGATAAAGCAAAAA+GGG - chr8_2:56065208-56065227 Msa1256250:CDS 25.0%
!!! AGGTTTACATTTTTAAGGTA+AGG + chr8_2:56065731-56065750 None:intergenic 25.0%
!!! AGACAAGAGTTAAGATTTTT+TGG - chr8_2:56065922-56065941 Msa1256250:CDS 25.0%
! TTGTCTGGATAAATTTGTAT+AGG - chr8_2:56065962-56065981 Msa1256250:intron 25.0%
!! TTATGAAGAAGATTTAAAGC+AGG - chr8_2:56066168-56066187 Msa1256250:CDS 25.0%
! AATAAAATGCAATGGTAAAG+AGG - chr8_2:56066658-56066677 Msa1256250:CDS 25.0%
! ATATATGCTTGGATCAAAAT+TGG + chr8_2:56066690-56066709 None:intergenic 25.0%
! TTCTGCTGCATATATATAAT+GGG + chr8_2:56066826-56066845 None:intergenic 25.0%
!! TCACAATTTGGATTTAAGTT+TGG - chr8_2:56066866-56066885 Msa1256250:intron 25.0%
!! CACAATTTGGATTTAAGTTT+GGG - chr8_2:56066867-56066886 Msa1256250:intron 25.0%
!! TTGGTCTATTATATGGTTTT+GGG + chr8_2:56067107-56067126 None:intergenic 25.0%
!! TTTGGTCTATTATATGGTTT+TGG + chr8_2:56067108-56067127 None:intergenic 25.0%
!!! TGTAAAGAATTTTGAAGTCT+CGG + chr8_2:56067496-56067515 None:intergenic 25.0%
! CTTCAAAATTCTTTACATTG+TGG - chr8_2:56067499-56067518 Msa1256250:CDS 25.0%
!!! ATAACCATGGTTTTAAATTG+CGG - chr8_2:56067569-56067588 Msa1256250:CDS 25.0%
! ATTGCAATCATGGTTATAAA+TGG + chr8_2:56067729-56067748 None:intergenic 25.0%
! GAATGTAAAACGGTTAAATA+GGG + chr8_2:56068038-56068057 None:intergenic 25.0%
! TGAATGTAAAACGGTTAAAT+AGG + chr8_2:56068039-56068058 None:intergenic 25.0%
! AATTTGAATGCAATGTTAGA+AGG - chr8_2:56068123-56068142 Msa1256250:five_prime_UTR 25.0%
! ATTTGAATGCAATGTTAGAA+GGG - chr8_2:56068124-56068143 Msa1256250:five_prime_UTR 25.0%
!!! TTCTTGCTTTTCTGTATTAT+TGG - chr8_2:56068288-56068307 Msa1256250:five_prime_UTR 25.0%
!! TAAAAGAAGGTGATTTTGGT+TGG + chr8_2:56065003-56065022 None:intergenic 30.0%
! AAGGTAAAAGAAGGTGATTT+TGG + chr8_2:56065007-56065026 None:intergenic 30.0%
!!! TGGTTTTGAAAGGTAAAAGA+AGG + chr8_2:56065016-56065035 None:intergenic 30.0%
!!! TTTGGTTCTTTGGTTTTGAA+AGG + chr8_2:56065026-56065045 None:intergenic 30.0%
!! ACTTTGTTTCTTTGGTTCTT+TGG + chr8_2:56065036-56065055 None:intergenic 30.0%
! GAACCAAAGAAACAAAGTTT+TGG - chr8_2:56065038-56065057 Msa1256250:CDS 30.0%
! GAACCAAAACTTTGTTTCTT+TGG + chr8_2:56065044-56065063 None:intergenic 30.0%
GAAGATCATGAAAAATCTGA+AGG - chr8_2:56065164-56065183 Msa1256250:CDS 30.0%
GAGATGAAGATAAAGCAAAA+AGG - chr8_2:56065207-56065226 Msa1256250:CDS 30.0%
! TTTTGTCAATCAGAAACACT+TGG - chr8_2:56065533-56065552 Msa1256250:intron 30.0%
TCAAGAAGTTCACAATATAG+AGG - chr8_2:56065629-56065648 Msa1256250:intron 30.0%
!!! GTTACTTTTTACAGAAGAAC+AGG - chr8_2:56065653-56065672 Msa1256250:intron 30.0%
!! ACTGAATAGATTGTTTTGTC+TGG - chr8_2:56065947-56065966 Msa1256250:CDS 30.0%
TCTGGATAAATTTGTATAGG+TGG - chr8_2:56065965-56065984 Msa1256250:intron 30.0%
AAAATAGACAACGTAAGCAA+AGG + chr8_2:56066557-56066576 None:intergenic 30.0%
AAAGCAGCAATAAAATGCAA+TGG - chr8_2:56066650-56066669 Msa1256250:CDS 30.0%
GTTCTGCTGCATATATATAA+TGG + chr8_2:56066827-56066846 None:intergenic 30.0%
TTTGCTTGAGTATCATTGAT+AGG + chr8_2:56066909-56066928 None:intergenic 30.0%
ATGCATCTGATCAATCTAAT+TGG - chr8_2:56066931-56066950 Msa1256250:CDS 30.0%
!! CATTTGATGATGAAGAATGA+AGG + chr8_2:56067200-56067219 None:intergenic 30.0%
ATTTGTGACTGATCTCTAAA+AGG + chr8_2:56067240-56067259 None:intergenic 30.0%
TAGCAATTGTAGTTGCAATA+TGG - chr8_2:56067467-56067486 Msa1256250:CDS 30.0%
ATGGTTATGGTACAAAATCA+TGG + chr8_2:56067557-56067576 None:intergenic 30.0%
! ATGATTTTGTACCATAACCA+TGG - chr8_2:56067556-56067575 Msa1256250:CDS 30.0%
! GCAATTTAAAACCATGGTTA+TGG + chr8_2:56067570-56067589 None:intergenic 30.0%
! AATCTTTTGTCTTGTAGTTG+CGG + chr8_2:56067596-56067615 None:intergenic 30.0%
ACTACAAGACAAAAGATTTG+AGG - chr8_2:56067598-56067617 Msa1256250:CDS 30.0%
TGAATATGGAATTGCAATCA+TGG + chr8_2:56067739-56067758 None:intergenic 30.0%
ATCATCATCAACAACAACAA+TGG - chr8_2:56067879-56067898 Msa1256250:CDS 30.0%
GAAGATAAAGCAAAAAGGGT+TGG - chr8_2:56065212-56065231 Msa1256250:CDS 35.0%
! AGGACAATTTTCACTGTCTA+AGG + chr8_2:56065387-56065406 None:intergenic 35.0%
!!! GACAAGACAGTTTTTTCCTA+TGG - chr8_2:56065409-56065428 Msa1256250:intron 35.0%
ATGGTTATAGCATCTTCATG+TGG - chr8_2:56065449-56065468 Msa1256250:intron 35.0%
!! CCTCTTCTACTTTTCTTCAT+AGG + chr8_2:56065602-56065621 None:intergenic 35.0%
CCTATGAAGAAAAGTAGAAG+AGG - chr8_2:56065599-56065618 Msa1256250:intron 35.0%
TATTGTGAACTTCTTGACCT+TGG + chr8_2:56065626-56065645 None:intergenic 35.0%
TTTGTGTCTCTCATAATTGC+AGG - chr8_2:56065771-56065790 Msa1256250:CDS 35.0%
TTGTGTCTCTCATAATTGCA+GGG - chr8_2:56065772-56065791 Msa1256250:CDS 35.0%
TGTGGAAAACAAGTGTATCT+TGG - chr8_2:56065797-56065816 Msa1256250:CDS 35.0%
!!! TTTTTTGCTTCTTTTGTGGC+TGG - chr8_2:56065885-56065904 Msa1256250:CDS 35.0%
! TTTTGTGGCTGGATATGATT+TGG - chr8_2:56065896-56065915 Msa1256250:CDS 35.0%
! TTGTATAGGTGGATTTGACA+CGG - chr8_2:56065976-56065995 Msa1256250:intron 35.0%
AGAGCAGCTATTAAGTTTAG+AGG - chr8_2:56066112-56066131 Msa1256250:CDS 35.0%
! CTATATTTAGAGCTTCCTCT+TGG + chr8_2:56066345-56066364 None:intergenic 35.0%
!! AGAGGAAGCTCTAAATATAG+AGG - chr8_2:56066345-56066364 Msa1256250:CDS 35.0%
ATTGCACAAATGTGGAAGAT+GGG - chr8_2:56066374-56066393 Msa1256250:CDS 35.0%
! GCAAGAATGGGACAATTTTT+AGG - chr8_2:56066399-56066418 Msa1256250:CDS 35.0%
ATTCACTAGGTACGTTTATC+TGG - chr8_2:56066494-56066513 Msa1256250:intron 35.0%
TTCACTAGGTACGTTTATCT+GGG - chr8_2:56066495-56066514 Msa1256250:intron 35.0%
GACAACGAGCTTAATAATTC+TGG - chr8_2:56066710-56066729 Msa1256250:CDS 35.0%
ATCAATCTAATTGGCAGCAT+GGG - chr8_2:56066940-56066959 Msa1256250:CDS 35.0%
CCATATGCTTCCATATTGTT+TGG + chr8_2:56067126-56067145 None:intergenic 35.0%
! CCAAACAATATGGAAGCATA+TGG - chr8_2:56067123-56067142 Msa1256250:intron 35.0%
! ACAATATGGAAGCATATGGA+AGG - chr8_2:56067127-56067146 Msa1256250:intron 35.0%
! CAATATGGAAGCATATGGAA+GGG - chr8_2:56067128-56067147 Msa1256250:intron 35.0%
TACCCACATGAAAATTTGGT+GGG + chr8_2:56067287-56067306 None:intergenic 35.0%
! AGAGTACCCACATGAAAATT+TGG + chr8_2:56067291-56067310 None:intergenic 35.0%
TTGTGATTGTAATTCCGTTG+TGG + chr8_2:56067627-56067646 None:intergenic 35.0%
CAATCATGGTTATAAATGGC+AGG + chr8_2:56067725-56067744 None:intergenic 35.0%
ATGAAAGATCACTTCCAACT+CGG + chr8_2:56067847-56067866 None:intergenic 35.0%
AACAACAACAATGGCAATCA+GGG - chr8_2:56067888-56067907 Msa1256250:CDS 35.0%
GGAACTCATTAGTCATAGTT+TGG - chr8_2:56068179-56068198 Msa1256250:five_prime_UTR 35.0%
GGATGAGTCAAACTAACAAA+CGG - chr8_2:56068200-56068219 Msa1256250:five_prime_UTR 35.0%
! AGAGAGAGTGAATGGTGTTA+AGG - chr8_2:56064742-56064761 Msa1256250:three_prime_UTR 40.0%
AGGTGAAGTTGAGATGCTTT+CGG - chr8_2:56064762-56064781 Msa1256250:three_prime_UTR 40.0%
AAGAGGTTGAGTGTGATGAT+GGG + chr8_2:56064928-56064947 None:intergenic 40.0%
AAAGAGGTTGAGTGTGATGA+TGG + chr8_2:56064929-56064948 None:intergenic 40.0%
GAGTAGTTGTCAAGTGAAAG+AGG + chr8_2:56064945-56064964 None:intergenic 40.0%
GGATGTTCTTCACTCAAAGA+TGG - chr8_2:56065185-56065204 Msa1256250:CDS 40.0%
GATAAAGCAAAAAGGGTTGG+TGG - chr8_2:56065215-56065234 Msa1256250:CDS 40.0%
GGAAAAAACTGTCTTGTCAC+AGG + chr8_2:56065407-56065426 None:intergenic 40.0%
TCATCAGACTCTTGATCCAT+AGG + chr8_2:56065428-56065447 None:intergenic 40.0%
GGATCAAGAGTCTGATGATA+TGG - chr8_2:56065430-56065449 Msa1256250:intron 40.0%
GTTATAGCATCTTCATGTGG+TGG - chr8_2:56065452-56065471 Msa1256250:intron 40.0%
! TAGTTTTCCTCGTGCTCATT+GGG - chr8_2:56065499-56065518 Msa1256250:intron 40.0%
TGTCAATCAGAAACACTTGG+AGG - chr8_2:56065536-56065555 Msa1256250:intron 40.0%
AGAAAAGTAGAAGAGGACCA+AGG - chr8_2:56065606-56065625 Msa1256250:intron 40.0%
TTTACAGAAGAACAGGTCGA+TGG - chr8_2:56065660-56065679 Msa1256250:intron 40.0%
TTACAGAAGAACAGGTCGAT+GGG - chr8_2:56065661-56065680 Msa1256250:intron 40.0%
GTCGATGGGAATCACATATA+TGG - chr8_2:56065675-56065694 Msa1256250:intron 40.0%
TCTCATAATTGCAGGGATTG+TGG - chr8_2:56065779-56065798 Msa1256250:CDS 40.0%
! GGTGTTACATTGCACAAATG+TGG - chr8_2:56066366-56066385 Msa1256250:CDS 40.0%
CATTGCACAAATGTGGAAGA+TGG - chr8_2:56066373-56066392 Msa1256250:CDS 40.0%
GCTTGGATCAAAATTGGTGA+CGG + chr8_2:56066684-56066703 None:intergenic 40.0%
AGCTCGTTGTCATATATGCT+TGG + chr8_2:56066701-56066720 None:intergenic 40.0%
TAACGCTGGTGATCACAATT+TGG - chr8_2:56066854-56066873 Msa1256250:intron 40.0%
GATCAATCTAATTGGCAGCA+TGG - chr8_2:56066939-56066958 Msa1256250:CDS 40.0%
TCAATCTAATTGGCAGCATG+GGG - chr8_2:56066941-56066960 Msa1256250:CDS 40.0%
! TCACCCACCAAATTTTCATG+TGG - chr8_2:56067281-56067300 Msa1256250:intron 40.0%
! CACCCACCAAATTTTCATGT+GGG - chr8_2:56067282-56067301 Msa1256250:intron 40.0%
GTACCCACATGAAAATTTGG+TGG + chr8_2:56067288-56067307 None:intergenic 40.0%
! AAGATTTGAGGTCTCCACAA+CGG - chr8_2:56067610-56067629 Msa1256250:CDS 40.0%
ATGGTTATAAATGGCAGGTG+TGG + chr8_2:56067720-56067739 None:intergenic 40.0%
CAACAACAACAATGGCAATC+AGG - chr8_2:56067887-56067906 Msa1256250:CDS 40.0%
GCAGCAGTTGCTAAATAATG+TGG + chr8_2:56067914-56067933 None:intergenic 40.0%
CGGTTAAATAGGGATCAAGA+GGG + chr8_2:56068028-56068047 None:intergenic 40.0%
ACGGTTAAATAGGGATCAAG+AGG + chr8_2:56068029-56068048 None:intergenic 40.0%
ATGTTAGAAGGGATAGCAAG+AGG - chr8_2:56068135-56068154 Msa1256250:five_prime_UTR 40.0%
AGAGAGAGAGAGAGAGTGAA+TGG - chr8_2:56064734-56064753 Msa1256250:three_prime_UTR 45.0%
TCGGCTAACATTGCTGAAAC+TGG - chr8_2:56064781-56064800 Msa1256250:three_prime_UTR 45.0%
! GCATCTTCATGTGGTGGAAA+TGG - chr8_2:56065458-56065477 Msa1256250:intron 45.0%
!! CTAGTTTTCCTCGTGCTCAT+TGG - chr8_2:56065498-56065517 Msa1256250:intron 45.0%
CAATCAGAAACACTTGGAGG+TGG - chr8_2:56065539-56065558 Msa1256250:intron 45.0%
!!! CAAAGCACTGGTTTTCCAAG+AGG - chr8_2:56066327-56066346 Msa1256250:intron 45.0%
CAATCTAATTGGCAGCATGG+GGG - chr8_2:56066942-56066961 Msa1256250:CDS 45.0%
GCATATGGAAGGGATTTGCA+TGG - chr8_2:56067138-56067157 Msa1256250:intron 45.0%
!! ATGGAGAGAGTGAAGCATTG+AGG - chr8_2:56067157-56067176 Msa1256250:intron 45.0%
! CGGACCGCAATTTAAAACCA+TGG + chr8_2:56067576-56067595 None:intergenic 45.0%
! AGGGTGGTCTAATTTGAGGT+GGG + chr8_2:56067955-56067974 None:intergenic 45.0%
GAAGAGGGTGGTCTAATTTG+AGG + chr8_2:56067959-56067978 None:intergenic 45.0%
TGCCAAGCTTGAGAAGAAGA+GGG + chr8_2:56067974-56067993 None:intergenic 45.0%
CAAGCTTGGCAGCACATAAA+TGG - chr8_2:56067983-56068002 Msa1256250:five_prime_UTR 45.0%
AAGAGGGTCTCATGAGATTG+CGG + chr8_2:56068012-56068031 None:intergenic 45.0%
!! AAAAAAAATGTTTAAATATT+AGG + chr8_2:56067045-56067064 None:intergenic 5.0%
!! TAATAAAATTAAGAAAATAA+GGG + chr8_2:56068094-56068113 None:intergenic 5.0%
TGGCCTCGTCTATGCTGTAT+TGG - chr8_2:56064801-56064820 Msa1256250:three_prime_UTR 50.0%
GGCCTCGTCTATGCTGTATT+GGG - chr8_2:56064802-56064821 Msa1256250:three_prime_UTR 50.0%
TGCCCAATACAGCATAGACG+AGG + chr8_2:56064807-56064826 None:intergenic 50.0%
TGCAACACCTACCTCTTCAC+TGG - chr8_2:56064871-56064890 Msa1256250:three_prime_UTR 50.0%
CAAACCTAGGACCAGTGAAG+AGG + chr8_2:56064885-56064904 None:intergenic 50.0%
TTTCCTCGTGCTCATTGGGT+AGG - chr8_2:56065503-56065522 Msa1256250:intron 50.0%
GTACTTCGTCGACAAAGCAC+TGG - chr8_2:56066315-56066334 Msa1256250:intron 50.0%
GCACAAATGTGGAAGATGGG+AGG - chr8_2:56066377-56066396 Msa1256250:CDS 50.0%
TGGAAGATGGGAGGCAAGAA+TGG - chr8_2:56066386-56066405 Msa1256250:CDS 50.0%
GGAAGATGGGAGGCAAGAAT+GGG - chr8_2:56066387-56066406 Msa1256250:CDS 50.0%
! TCTGGGCTTGTTTGACACTG+AGG - chr8_2:56066512-56066531 Msa1256250:intron 50.0%
ACACTGAGGTTGAAGCTGCA+AGG - chr8_2:56066526-56066545 Msa1256250:CDS 50.0%
TGATCACCAGCGTTACTTGC+TGG + chr8_2:56066849-56066868 None:intergenic 50.0%
ATAAATGGCAGGTGTGGTCG+CGG + chr8_2:56067714-56067733 None:intergenic 50.0%
TAGTTTCCCAGCAGCAGCTA+TGG - chr8_2:56067818-56067837 Msa1256250:CDS 50.0%
GAGGGTGGTCTAATTTGAGG+TGG + chr8_2:56067956-56067975 None:intergenic 50.0%
CAAGCTTGAGAAGAAGAGGG+TGG + chr8_2:56067971-56067990 None:intergenic 50.0%
CACCCTCTTCTTCTCAAGCT+TGG - chr8_2:56067969-56067988 Msa1256250:five_prime_UTR 50.0%
CTGCCAAGCTTGAGAAGAAG+AGG + chr8_2:56067975-56067994 None:intergenic 50.0%
CCTAGGACCAGTGAAGAGGT+AGG + chr8_2:56064881-56064900 None:intergenic 55.0%
CCTACCTCTTCACTGGTCCT+AGG - chr8_2:56064878-56064897 Msa1256250:three_prime_UTR 55.0%
ACACCTACCCAATGAGCACG+AGG + chr8_2:56065509-56065528 None:intergenic 55.0%
GCAGAACCAGCAAGTAACGC+TGG - chr8_2:56066840-56066859 Msa1256250:intron 55.0%
GCATGGGGGAAACAAGCCTA+AGG - chr8_2:56066956-56066975 Msa1256250:intron 55.0%
AGCAGCTATGGAAGCCGAGT+TGG - chr8_2:56067830-56067849 Msa1256250:CDS 55.0%
ACTGCTGCTGCAGCATCATC+AGG - chr8_2:56067926-56067945 Msa1256250:exon 55.0%
AGGGTCTCATGAGATTGCGG+AGG + chr8_2:56068009-56068028 None:intergenic 55.0%
ACACGGCACATGCAGCTGCT+CGG - chr8_2:56065993-56066012 Msa1256250:intron 60.0%
CGGCTTCCATAGCTGCTGCT+GGG + chr8_2:56067827-56067846 None:intergenic 60.0%
TCGGCTTCCATAGCTGCTGC+TGG + chr8_2:56067828-56067847 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 56064723 56068346 56064723 ID=Msa1256250;Name=Msa1256250
chr8_2 mRNA 56064723 56068346 56064723 ID=Msa1256250-mRNA-1;Parent=Msa1256250;Name=Msa1256250-mRNA-1;_AED=0.06;_eAED=0.06;_QI=405|1|1|1|1|1|10|313|518
chr8_2 exon 56064723 56065248 56064723 ID=Msa1256250-mRNA-1:exon:17315;Parent=Msa1256250-mRNA-1
chr8_2 exon 56065770 56065979 56065770 ID=Msa1256250-mRNA-1:exon:17314;Parent=Msa1256250-mRNA-1
chr8_2 exon 56066092 56066228 56066092 ID=Msa1256250-mRNA-1:exon:17313;Parent=Msa1256250-mRNA-1
chr8_2 exon 56066338 56066429 56066338 ID=Msa1256250-mRNA-1:exon:17312;Parent=Msa1256250-mRNA-1
chr8_2 exon 56066522 56066566 56066522 ID=Msa1256250-mRNA-1:exon:17311;Parent=Msa1256250-mRNA-1
chr8_2 exon 56066642 56066787 56066642 ID=Msa1256250-mRNA-1:exon:17310;Parent=Msa1256250-mRNA-1
chr8_2 exon 56066880 56066967 56066880 ID=Msa1256250-mRNA-1:exon:17309;Parent=Msa1256250-mRNA-1
chr8_2 exon 56067055 56067085 56067055 ID=Msa1256250-mRNA-1:exon:17308;Parent=Msa1256250-mRNA-1
chr8_2 exon 56067251 56067276 56067251 ID=Msa1256250-mRNA-1:exon:17307;Parent=Msa1256250-mRNA-1
chr8_2 exon 56067373 56068346 56067373 ID=Msa1256250-mRNA-1:exon:17306;Parent=Msa1256250-mRNA-1
chr8_2 five_prime_UTR 56067942 56068346 56067942 ID=Msa1256250-mRNA-1:five_prime_utr;Parent=Msa1256250-mRNA-1
chr8_2 CDS 56067373 56067941 56067373 ID=Msa1256250-mRNA-1:cds;Parent=Msa1256250-mRNA-1
chr8_2 CDS 56067251 56067276 56067251 ID=Msa1256250-mRNA-1:cds;Parent=Msa1256250-mRNA-1
chr8_2 CDS 56067055 56067085 56067055 ID=Msa1256250-mRNA-1:cds;Parent=Msa1256250-mRNA-1
chr8_2 CDS 56066880 56066967 56066880 ID=Msa1256250-mRNA-1:cds;Parent=Msa1256250-mRNA-1
chr8_2 CDS 56066642 56066787 56066642 ID=Msa1256250-mRNA-1:cds;Parent=Msa1256250-mRNA-1
chr8_2 CDS 56066522 56066566 56066522 ID=Msa1256250-mRNA-1:cds;Parent=Msa1256250-mRNA-1
chr8_2 CDS 56066338 56066429 56066338 ID=Msa1256250-mRNA-1:cds;Parent=Msa1256250-mRNA-1
chr8_2 CDS 56066092 56066228 56066092 ID=Msa1256250-mRNA-1:cds;Parent=Msa1256250-mRNA-1
chr8_2 CDS 56065770 56065979 56065770 ID=Msa1256250-mRNA-1:cds;Parent=Msa1256250-mRNA-1
chr8_2 CDS 56065036 56065248 56065036 ID=Msa1256250-mRNA-1:cds;Parent=Msa1256250-mRNA-1
chr8_2 three_prime_UTR 56064723 56065035 56064723 ID=Msa1256250-mRNA-1:three_prime_utr;Parent=Msa1256250-mRNA-1
Gene Sequence

>Msa1256250

ATGTGGGATCTTAATGGTTCACCTTTTAAGAGAAAAGAAGATCATGAAAAATCTGAAGGATGTTCTTCACTCAAAGATGGAGATGAAGATAAAGCAAAAAGGGTTGGTGGATCTGTTTCAAATTCAAGCTCTTCAGCTATAGTAATAGAAGAAGATTCAGAAGAAGACAATAGCAACAAAGACATGATGATGATGAAGAAAAGAAACAGTAAGATATTTGGTTTCTCAGTAACTCAAGAAGAAGAAGAAGAAAATTCCTTAGACAGTGAAAATTGTCCTGTGACAAGACAGTTTTTTCCTATGGATCAAGAGTCTGATGATATGGTTATAGCATCTTCATGTGGTGGAAATGGAACATCTTCATCTTCTTCTAGTTTTCCTCGTGCTCATTGGGTAGGTGTGAAATTTTGTCAATCAGAAACACTTGGAGGTGGAAAATCAGTAGAACTTTCTTCTTCATCTTCTTCGCAACCTATGAAGAAAAGTAGAAGAGGACCAAGGTCAAGAAGTTCACAATATAGAGGAGTTACTTTTTACAGAAGAACAGGTCGATGGGAATCACATATATGGGATTGTGGAAAACAAGTGTATCTTGGTGGATTTGACACGGCACATGCAGCTGCTCGTGCATATGATAGAGCAGCTATTAAGTTTAGAGGAGTTGAAGCTGACATAAACTTTAACATTGAAGATTATGAAGAAGATTTAAAGCAGATGACTAATTTGACAAAAGAAGAGTTTGTACATGTACTTCGTCGACAAAGCACTGGTTTTCCAAGAGGAAGCTCTAAATATAGAGGTGTTACATTGCACAAATGTGGAAGATGGGAGGCAAGAATGGGACAATTTTTAGGAAAAAAGTACGTTTATCTGGGCTTGTTTGACACTGAGGTTGAAGCTGCAAGGGCTTATGACAAAGCAGCAATAAAATGCAATGGTAAAGAGGCCGTCACCAATTTTGATCCAAGCATATATGACAACGAGCTTAATAATTCTGCAGAACCAGCAAGTAACGCTGGTGATCACAATTTGGATTTAAGTTTGGGAAATTCAAGTTCAAAGCCTATCAATGATACTCAAGCAAATCATGCATCTGATCAATCTAATTGGCAGCATGGGGGAAACAAGCCTAAGCTTGTGAATATACTCCCAAAACCATATAATAGACCAAACAATATGGAAGCATATGGAAGGGATTTGCATGGAGAGAGTGAAGCATTGAGGATGCTAAGTCAAACTCACCTTCATTCTTCATCATCAAATGAAATGCATAGATATGCTCCTTTTAGAGATCAGTCACAAATGCTTCAAAGTTTTGCACATACTCACCCACCAAATTTTCATTTTCCCAGCAGCAGCTATGGAAGCCGAGTTGGAAGTGATCTTTCATTATCAACAAGCAATCATCATCAACAACAACAATGGCAATCAGGGCCACATTATTTAGCAACTGCTGCTGCAGCATCATCAGGATTCCCACCTCAAATTAGACCACCCTCTTCTTCTCAAGCTTGGCAGCACATAAATGGCCTCCGCAATCTCATGAGACCCTCTTGA
Protein sequence

>Msa1256250

MWDLNGSPFKRKEDHEKSEGCSSLKDGDEDKAKRVGGSVSNSSSSAIVIEEDSEEDNSNKDMMMMKKRNSKIFGFSVTQEEEEENSLDSENCPVTRQFFPMDQESDDMVIASSCGGNGTSSSSSSFPRAHWVGVKFCQSETLGGGKSVELSSSSSSQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEEDLKQMTNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDKAAIKCNGKEAVTNFDPSIYDNELNNSAEPASNAGDHNLDLSLGNSSSKPINDTQANHASDQSNWQHGGNKPKLVNILPKPYNRPNNMEAYGRDLHGESEALRMLSQTHLHSSSSNEMHRYAPFRDQSQMLQSFAHTHPPNFHFPSSSYGSRVGSDLSLSTSNHHQQQQWQSGPHYLATAAAASSGFPPQIRPPSSSQAWQHINGLRNLMRPS*