Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0968630 | sp|Q0WMN5|Y3913_ARATH | 43.710 | 469 | 220 | 8 | 51 | 503 | 59 | 499 | 6.84e-115 | 351 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0968630 | G7KLG5 | 95.420 | 524 | 10 | 1 | 1 | 510 | 1 | 524 | 0.0 | 1027 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0008250 | Msa0968630 | 0.827899 | 1.212386e-54 | -8.615850e-47 |
Msa0015370 | Msa0968630 | 0.810663 | 1.030455e-50 | -8.615850e-47 |
Msa0017980 | Msa0968630 | 0.811851 | 5.693093e-51 | -8.615850e-47 |
Msa0018870 | Msa0968630 | 0.838630 | 2.566236e-57 | -8.615850e-47 |
Msa0030400 | Msa0968630 | 0.823302 | 1.490283e-53 | -8.615850e-47 |
Msa0046360 | Msa0968630 | 0.849334 | 3.457398e-60 | -8.615850e-47 |
Msa0065690 | Msa0968630 | 0.813707 | 2.233044e-51 | -8.615850e-47 |
Msa0072910 | Msa0968630 | 0.820225 | 7.673744e-53 | -8.615850e-47 |
Msa0091340 | Msa0968630 | 0.859279 | 4.615772e-63 | -8.615850e-47 |
Msa0094700 | Msa0968630 | 0.809318 | 2.007512e-50 | -8.615850e-47 |
Msa0097730 | Msa0968630 | 0.808981 | 2.371253e-50 | -8.615850e-47 |
Msa0101940 | Msa0968630 | 0.803166 | 3.969149e-49 | -8.615850e-47 |
Msa0109070 | Msa0968630 | 0.815612 | 8.456538e-52 | -8.615850e-47 |
Msa0612730 | Msa0968630 | 0.804704 | 1.901468e-49 | -8.615850e-47 |
Msa0622690 | Msa0968630 | 0.806940 | 6.443000e-50 | -8.615850e-47 |
Msa0626890 | Msa0968630 | 0.805812 | 1.114218e-49 | -8.615850e-47 |
Msa0645780 | Msa0968630 | 0.812443 | 4.229008e-51 | -8.615850e-47 |
Msa0650360 | Msa0968630 | 0.817660 | 2.939367e-52 | -8.615850e-47 |
Msa0650860 | Msa0968630 | 0.817651 | 2.951859e-52 | -8.615850e-47 |
Msa0657820 | Msa0968630 | 0.830016 | 3.723820e-55 | -8.615850e-47 |
Msa0726640 | Msa0968630 | 0.801310 | 9.561965e-49 | -8.615850e-47 |
Msa0761930 | Msa0968630 | 0.811097 | 8.302981e-51 | -8.615850e-47 |
Msa0789800 | Msa0968630 | 0.812981 | 3.225100e-51 | -8.615850e-47 |
Msa0791170 | Msa0968630 | 0.814084 | 1.844564e-51 | -8.615850e-47 |
Msa0807950 | Msa0968630 | 0.822157 | 2.753298e-53 | -8.615850e-47 |
Msa0121080 | Msa0968630 | 0.822010 | 2.978053e-53 | -8.615850e-47 |
Msa0131390 | Msa0968630 | 0.807107 | 5.939135e-50 | -8.615850e-47 |
Msa0144510 | Msa0968630 | 0.801569 | 8.465028e-49 | -8.615850e-47 |
Msa0147990 | Msa0968630 | 0.826773 | 2.256804e-54 | -8.615850e-47 |
Msa0160080 | Msa0968630 | 0.829604 | 4.690086e-55 | -8.615850e-47 |
Msa0168960 | Msa0968630 | 0.806461 | 8.136405e-50 | -8.615850e-47 |
Msa0173760 | Msa0968630 | 0.818779 | 1.640114e-52 | -8.615850e-47 |
Msa0173850 | Msa0968630 | 0.820861 | 5.483449e-53 | -8.615850e-47 |
Msa0174800 | Msa0968630 | 0.823108 | 1.654039e-53 | -8.615850e-47 |
Msa0177490 | Msa0968630 | 0.805895 | 1.070484e-49 | -8.615850e-47 |
Msa0183490 | Msa0968630 | 0.800219 | 1.597292e-48 | -8.615850e-47 |
Msa0185550 | Msa0968630 | 0.820434 | 6.872866e-53 | -8.615850e-47 |
Msa0190400 | Msa0968630 | 0.813698 | 2.243397e-51 | -8.615850e-47 |
Msa0192770 | Msa0968630 | 0.802509 | 5.423705e-49 | -8.615850e-47 |
Msa0206970 | Msa0968630 | 0.807358 | 5.255450e-50 | -8.615850e-47 |
Msa0214730 | Msa0968630 | 0.829914 | 3.942319e-55 | -8.615850e-47 |
Msa0224980 | Msa0968630 | 0.806732 | 7.132196e-50 | -8.615850e-47 |
Msa0225030 | Msa0968630 | 0.812512 | 4.084892e-51 | -8.615850e-47 |
Msa0226800 | Msa0968630 | 0.814400 | 1.570614e-51 | -8.615850e-47 |
Msa0234930 | Msa0968630 | 0.801741 | 7.802523e-49 | -8.615850e-47 |
Msa0371050 | Msa0968630 | 0.804443 | 2.155129e-49 | -8.615850e-47 |
Msa0380360 | Msa0968630 | 0.808831 | 2.552959e-50 | -8.615850e-47 |
Msa0380420 | Msa0968630 | 0.808144 | 3.577166e-50 | -8.615850e-47 |
Msa0381990 | Msa0968630 | 0.806508 | 7.951836e-50 | -8.615850e-47 |
Msa0384570 | Msa0968630 | 0.807730 | 4.382158e-50 | -8.615850e-47 |
Msa0387120 | Msa0968630 | 0.813785 | 2.146761e-51 | -8.615850e-47 |
Msa0416000 | Msa0968630 | 0.816257 | 6.070951e-52 | -8.615850e-47 |
Msa0416530 | Msa0968630 | 0.813514 | 2.462575e-51 | -8.615850e-47 |
Msa0421100 | Msa0968630 | 0.844238 | 8.556345e-59 | -8.615850e-47 |
Msa0426480 | Msa0968630 | 0.816287 | 5.977987e-52 | -8.615850e-47 |
Msa0434630 | Msa0968630 | 0.813442 | 2.554808e-51 | -8.615850e-47 |
Msa0440220 | Msa0968630 | 0.821247 | 4.469433e-53 | -8.615850e-47 |
Msa0447810 | Msa0968630 | 0.803852 | 2.859858e-49 | -8.615850e-47 |
Msa0457380 | Msa0968630 | 0.821794 | 3.341407e-53 | -8.615850e-47 |
Msa0471080 | Msa0968630 | 0.817767 | 2.780371e-52 | -8.615850e-47 |
Msa0475740 | Msa0968630 | 0.806309 | 8.757077e-50 | -8.615850e-47 |
Msa0476150 | Msa0968630 | 0.823132 | 1.632912e-53 | -8.615850e-47 |
Msa0476180 | Msa0968630 | 0.804095 | 2.545999e-49 | -8.615850e-47 |
Msa0243160 | Msa0968630 | 0.801549 | 8.545919e-49 | -8.615850e-47 |
Msa0252160 | Msa0968630 | 0.831691 | 1.446490e-55 | -8.615850e-47 |
Msa0258380 | Msa0968630 | 0.836861 | 7.299535e-57 | -8.615850e-47 |
Msa0258410 | Msa0968630 | 0.830402 | 2.997643e-55 | -8.615850e-47 |
Msa0266010 | Msa0968630 | 0.812570 | 3.966741e-51 | -8.615850e-47 |
Msa0273270 | Msa0968630 | 0.803243 | 3.826461e-49 | -8.615850e-47 |
Msa0274870 | Msa0968630 | 0.816992 | 4.153755e-52 | -8.615850e-47 |
Msa0288360 | Msa0968630 | 0.818454 | 1.944209e-52 | -8.615850e-47 |
Msa0290590 | Msa0968630 | 0.800206 | 1.606744e-48 | -8.615850e-47 |
Msa0308430 | Msa0968630 | 0.804166 | 2.461405e-49 | -8.615850e-47 |
Msa0311130 | Msa0968630 | 0.800313 | 1.527874e-48 | -8.615850e-47 |
Msa0323790 | Msa0968630 | 0.806951 | 6.408273e-50 | -8.615850e-47 |
Msa0335740 | Msa0968630 | 0.835085 | 2.059688e-56 | -8.615850e-47 |
Msa0340440 | Msa0968630 | 0.847949 | 8.367461e-60 | -8.615850e-47 |
Msa0352200 | Msa0968630 | 0.825562 | 4.381633e-54 | -8.615850e-47 |
Msa0485350 | Msa0968630 | 0.823160 | 1.608560e-53 | -8.615850e-47 |
Msa0517190 | Msa0968630 | 0.803017 | 4.260251e-49 | -8.615850e-47 |
Msa0521190 | Msa0968630 | 0.818309 | 2.096033e-52 | -8.615850e-47 |
Msa0524510 | Msa0968630 | 0.807973 | 3.890483e-50 | -8.615850e-47 |
Msa0528740 | Msa0968630 | 0.822024 | 2.955769e-53 | -8.615850e-47 |
Msa0528870 | Msa0968630 | 0.817892 | 2.604887e-52 | -8.615850e-47 |
Msa0534380 | Msa0968630 | 0.804828 | 1.790799e-49 | -8.615850e-47 |
Msa0558220 | Msa0968630 | 0.800504 | 1.397481e-48 | -8.615850e-47 |
Msa0573940 | Msa0968630 | 0.800474 | 1.416865e-48 | -8.615850e-47 |
Msa0573970 | Msa0968630 | 0.826108 | 3.250542e-54 | -8.615850e-47 |
Msa0575450 | Msa0968630 | 0.823100 | 1.660966e-53 | -8.615850e-47 |
Msa0579610 | Msa0968630 | 0.800438 | 1.441350e-48 | -8.615850e-47 |
Msa0581490 | Msa0968630 | 0.804125 | 2.509398e-49 | -8.615850e-47 |
Msa0583810 | Msa0968630 | 0.829939 | 3.886983e-55 | -8.615850e-47 |
Msa0853920 | Msa0968630 | 0.811859 | 5.671565e-51 | -8.615850e-47 |
Msa0901140 | Msa0968630 | 0.822784 | 1.967808e-53 | -8.615850e-47 |
Msa0931730 | Msa0968630 | 0.805126 | 1.551542e-49 | -8.615850e-47 |
Msa0933220 | Msa0968630 | 0.863778 | 1.951841e-64 | -8.615850e-47 |
Msa0968630 | Msa0970120 | 0.802001 | 6.900756e-49 | -8.615850e-47 |
Msa0968630 | Msa1011060 | 0.810111 | 1.355599e-50 | -8.615850e-47 |
Msa0968630 | Msa1011240 | 0.804284 | 2.325608e-49 | -8.615850e-47 |
Msa0968630 | Msa1016130 | 0.805074 | 1.591132e-49 | -8.615850e-47 |
Msa0968630 | Msa1030440 | 0.822037 | 2.934001e-53 | -8.615850e-47 |
Msa0968630 | Msa1031650 | 0.805898 | 1.068653e-49 | -8.615850e-47 |
Msa0968630 | Msa1038040 | 0.807353 | 5.269018e-50 | -8.615850e-47 |
Msa0968630 | Msa1052600 | 0.823067 | 1.691291e-53 | -8.615850e-47 |
Msa0968630 | Msa1058980 | 0.823926 | 1.064919e-53 | -8.615850e-47 |
Msa0968630 | Msa1061130 | 0.800549 | 1.368105e-48 | -8.615850e-47 |
Msa0968630 | Msa1061520 | 0.819920 | 9.015073e-53 | -8.615850e-47 |
Msa0968630 | Msa1068110 | 0.804071 | 2.575862e-49 | -8.615850e-47 |
Msa0968630 | Msa1070930 | 0.813337 | 2.693564e-51 | -8.615850e-47 |
Msa0968630 | Msa1106830 | 0.819837 | 9.414485e-53 | -8.615850e-47 |
Msa0968630 | Msa1121290 | 0.820707 | 5.948159e-53 | -8.615850e-47 |
Msa0968630 | Msa1125310 | 0.829192 | 5.904879e-55 | -8.615850e-47 |
Msa0968630 | Msa1130650 | 0.804085 | 2.558316e-49 | -8.615850e-47 |
Msa0968630 | Msa1145370 | 0.807813 | 4.207478e-50 | -8.615850e-47 |
Msa0968630 | Msa1151120 | 0.816178 | 6.320731e-52 | -8.615850e-47 |
Msa0968630 | Msa1151970 | 0.815356 | 9.640550e-52 | -8.615850e-47 |
Msa0968630 | Msa1156210 | 0.807288 | 5.439701e-50 | -8.615850e-47 |
Msa0968630 | Msa1156480 | 0.814250 | 1.695080e-51 | -8.615850e-47 |
Msa0968630 | Msa1158540 | 0.808610 | 2.846383e-50 | -8.615850e-47 |
Msa0968630 | Msa1184640 | 0.801213 | 1.001180e-48 | -8.615850e-47 |
Msa0968630 | Msa1206500 | 0.808437 | 3.099204e-50 | -8.615850e-47 |
Msa0968630 | Msa1228880 | 0.817885 | 2.614425e-52 | -8.615850e-47 |
Msa0968630 | Msa1233770 | 0.804187 | 2.436493e-49 | -8.615850e-47 |
Msa0968630 | Msa1236090 | 0.808381 | 3.184363e-50 | -8.615850e-47 |
Msa0968630 | Msa1254990 | 0.812268 | 4.618168e-51 | -8.615850e-47 |
Msa0968630 | Msa1258770 | 0.808201 | 3.479001e-50 | -8.615850e-47 |
Msa0968630 | Msa1296930 | 0.809890 | 1.512923e-50 | -8.615850e-47 |
Msa0968630 | Msa1302750 | 0.810683 | 1.020147e-50 | -8.615850e-47 |
Msa0968630 | Msa1316720 | 0.810423 | 1.161416e-50 | -8.615850e-47 |
Msa0968630 | Msa1330280 | 0.801423 | 9.068059e-49 | -8.615850e-47 |
Msa0968630 | Msa1344940 | 0.806177 | 9.335558e-50 | -8.615850e-47 |
Msa0968630 | Msa1348230 | 0.822127 | 2.797258e-53 | -8.615850e-47 |
Msa0968630 | Msa1353270 | 0.820175 | 7.880344e-53 | -8.615850e-47 |
Msa0968630 | Msa1356460 | 0.853834 | 1.838941e-61 | -8.615850e-47 |
Msa0968630 | Msa1369900 | 0.802545 | 5.331918e-49 | -8.615850e-47 |
Msa0968630 | Msa1370830 | 0.801527 | 8.632764e-49 | -8.615850e-47 |
Msa0968630 | Msa1375630 | 0.812516 | 4.076374e-51 | -8.615850e-47 |
Msa0968630 | Msa1393720 | 0.806641 | 7.454670e-50 | -8.615850e-47 |
Msa0968630 | Msa1403900 | 0.805955 | 1.039420e-49 | -8.615850e-47 |
Msa0968630 | Msa1455120 | 0.814252 | 1.693355e-51 | -8.615850e-47 |
Msa0968630 | Msa1456170 | 0.823094 | 1.666394e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0968630 | MtrunA17_Chr6g0469941 | 95.420 | 524 | 10 | 1 | 1 | 510 | 1 | 524 | 0.0 | 1027 |
Msa0968630 | MtrunA17_Chr5g0442211 | 28.412 | 447 | 245 | 12 | 66 | 508 | 65 | 440 | 4.38e-38 | 145 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0968630 | AT5G24060.1 | 45.885 | 486 | 230 | 10 | 32 | 509 | 20 | 480 | 7.61e-134 | 397 |
Msa0968630 | AT5G24060.3 | 46.855 | 461 | 213 | 9 | 57 | 509 | 27 | 463 | 2.14e-133 | 395 |
Msa0968630 | AT5G24060.2 | 47.162 | 458 | 210 | 9 | 60 | 509 | 60 | 493 | 2.96e-133 | 395 |
Msa0968630 | AT3G49140.1 | 43.710 | 469 | 220 | 8 | 51 | 503 | 59 | 499 | 6.95e-116 | 351 |
Msa0968630 | AT3G59300.3 | 31.250 | 416 | 220 | 10 | 90 | 502 | 103 | 455 | 7.63e-51 | 180 |
Msa0968630 | AT3G59300.1 | 31.250 | 416 | 220 | 10 | 90 | 502 | 97 | 449 | 8.11e-51 | 180 |
Msa0968630 | AT3G59300.2 | 30.024 | 413 | 196 | 12 | 90 | 502 | 97 | 416 | 1.08e-43 | 160 |
Find 135 sgRNAs with CRISPR-Local
Find 590 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTGTTACTTTACTAATTT+CGG | 0.236432 | 6_3:+99855614 | None:intergenic |
TGTTGCTTTGGGTGATTTCT+TGG | 0.257826 | 6_3:+99853776 | None:intergenic |
TGTTGCATTTAATCAATAAT+TGG | 0.259415 | 6_3:-99853601 | Msa0968630:three_prime_UTR |
AACAATCTCCAATCTGTAAA+AGG | 0.275206 | 6_3:+99855470 | None:intergenic |
GAGAGAGAGAGTACGGAGAT+TGG | 0.292151 | 6_3:+99862122 | None:intergenic |
GATGAGGTACACTTTCCTTT+TGG | 0.294142 | 6_3:+99862270 | None:intergenic |
CCATGTTCATCTGTCAAATA+TGG | 0.298949 | 6_3:+99856996 | None:intergenic |
ACTTGCAGACTGGGCAAAAT+TGG | 0.313686 | 6_3:-99855950 | Msa0968630:CDS |
AACGTTTATAAAATAAAATT+AGG | 0.338659 | 6_3:+99853474 | None:intergenic |
TTGTTGTAGCAAGTCATAAT+TGG | 0.349044 | 6_3:-99856300 | Msa0968630:intron |
GAAAGTGTTGGTGTGATTAA+TGG | 0.350795 | 6_3:-99855582 | Msa0968630:CDS |
GGAGGAGGAGAGGTGGAAGC+GGG | 0.353597 | 6_3:+99862158 | None:intergenic |
AGGAGGAGGAGAGGTGGAAG+CGG | 0.353661 | 6_3:+99862157 | None:intergenic |
CTTCAGATGATCCAATTGAT+TGG | 0.355755 | 6_3:-99855746 | Msa0968630:CDS |
TCTTCACAAGTTTGTTTCTC+CGG | 0.373500 | 6_3:+99858103 | None:intergenic |
GATGTGAATGGTGGTGGATT+AGG | 0.374841 | 6_3:-99861760 | Msa0968630:CDS |
AATTTCATGATAATATTGTT+TGG | 0.377075 | 6_3:-99857028 | Msa0968630:CDS |
TCTGTCAAATATGGCAAATC+TGG | 0.384390 | 6_3:+99857005 | None:intergenic |
AGTTTGTTTCTCCGGGGAAA+TGG | 0.385331 | 6_3:+99858111 | None:intergenic |
ATTGGAAAAGCGAGTGGAGG+AGG | 0.388769 | 6_3:+99862140 | None:intergenic |
TTTACTAATTTCGGCAGTAC+TGG | 0.390296 | 6_3:+99855623 | None:intergenic |
TCGTGTAGTCTTCTACTTCA+AGG | 0.390376 | 6_3:+99854913 | None:intergenic |
TTCGGCAGTACTGGATTGAT+TGG | 0.396859 | 6_3:+99855632 | None:intergenic |
GAGGTGGAAGCGGGTGGCAA+TGG | 0.398598 | 6_3:+99862167 | None:intergenic |
GCAGATATATGCTTCTGTAT+TGG | 0.404519 | 6_3:+99855654 | None:intergenic |
GGATTTGTCTACTTCGTGAT+TGG | 0.406941 | 6_3:+99862291 | Msa0968640:intron |
GGCTGCTCCATCCAATCAAT+TGG | 0.411923 | 6_3:+99855735 | None:intergenic |
GGAAAAGCGAGTGGAGGAGG+AGG | 0.417403 | 6_3:+99862143 | None:intergenic |
GAGGCAGCTATTTCCTCAAA+TGG | 0.417837 | 6_3:+99858003 | None:intergenic |
GTCCATCAGAAATTGACTTT+GGG | 0.420188 | 6_3:-99856236 | Msa0968630:CDS |
AGGTGGAAGCGGGTGGCAAT+GGG | 0.421436 | 6_3:+99862168 | None:intergenic |
CTCCGGGGAAATGGAGTGCT+CGG | 0.429532 | 6_3:+99858120 | None:intergenic |
TGAGATTCGGATTCAAGAAA+AGG | 0.431101 | 6_3:-99854250 | Msa0968630:CDS |
GGTCCATCAGAAATTGACTT+TGG | 0.432825 | 6_3:-99856237 | Msa0968630:CDS |
TCACTTCTGTACACAATCAT+TGG | 0.433362 | 6_3:+99853672 | None:intergenic |
TATTTCCTCAAATGGGTGAT+AGG | 0.435060 | 6_3:+99858011 | None:intergenic |
CTTCACAAGTTTGTTTCTCC+GGG | 0.437426 | 6_3:+99858104 | None:intergenic |
ATATCTCATTTGAAAGCTGC+TGG | 0.447699 | 6_3:-99854849 | Msa0968630:CDS |
CTTATCTGTGTGGACTCGCT+CGG | 0.448010 | 6_3:-99854314 | Msa0968630:CDS |
ACTCGCTCGGGTTTGACGTA+AGG | 0.448186 | 6_3:-99854301 | Msa0968630:CDS |
ATAAAATAAAATTAGGAGAC+AGG | 0.448843 | 6_3:+99853481 | None:intergenic |
TTATCGTTTGCAGGAATGGC+TGG | 0.453489 | 6_3:-99856019 | Msa0968630:intron |
GATAATCATCATAGTTGGTT+GGG | 0.460026 | 6_3:+99862197 | None:intergenic |
AGATAACGCATCACAAAAGT+TGG | 0.464677 | 6_3:-99855532 | Msa0968630:CDS |
ATGATGAAGCACTTGCAGAC+TGG | 0.466540 | 6_3:-99855960 | Msa0968630:CDS |
TATCCAACAGAGAGACTTAA+GGG | 0.466816 | 6_3:+99854803 | None:intergenic |
AGCGAGTGGAGGAGGAGGAG+AGG | 0.468033 | 6_3:+99862148 | None:intergenic |
CAAGTTCAAACACTGAGATT+CGG | 0.468623 | 6_3:-99854263 | Msa0968630:CDS |
ATATCCAACAGAGAGACTTA+AGG | 0.470097 | 6_3:+99854802 | None:intergenic |
CTCGCTCGGGTTTGACGTAA+GGG | 0.472152 | 6_3:-99854300 | Msa0968630:CDS |
TGATGAAGCACTTGCAGACT+GGG | 0.472876 | 6_3:-99855959 | Msa0968630:CDS |
TTATCTGTGTGGACTCGCTC+GGG | 0.475357 | 6_3:-99854313 | Msa0968630:CDS |
TTTGACGTAAGGGTTTGTTC+AGG | 0.476902 | 6_3:-99854290 | Msa0968630:CDS |
CGATAATCATCATAGTTGGT+TGG | 0.486660 | 6_3:+99862196 | None:intergenic |
ATCTCTGAGATGGACTTGTC+AGG | 0.489283 | 6_3:-99856258 | Msa0968630:CDS |
TTGTATGGCTTGTATGACTT+TGG | 0.490843 | 6_3:-99853695 | Msa0968630:three_prime_UTR |
ACGCAGGTCTTATAACTCCT+TGG | 0.498828 | 6_3:+99855694 | None:intergenic |
TCCTCAAATGGGTGATAGGA+TGG | 0.503275 | 6_3:+99858015 | None:intergenic |
AGATGATCCAATTGATTGGA+TGG | 0.503955 | 6_3:-99855742 | Msa0968630:CDS |
TCCTACACCCATGCATTGCA+CGG | 0.504474 | 6_3:+99853333 | None:intergenic |
GCGGAGGATGTGAATGGTGG+TGG | 0.505698 | 6_3:-99861766 | Msa0968630:CDS |
GATGACCTTGCAATAGCATC+AGG | 0.506785 | 6_3:+99854882 | None:intergenic |
CCTCCGCATTCCACGTTGAA+CGG | 0.507316 | 6_3:+99861782 | None:intergenic |
ATTTAGACCCGTGCAATGCA+TGG | 0.507502 | 6_3:-99853341 | Msa0968630:three_prime_UTR |
ACAACATCCTAGCTCAGATC+AGG | 0.512194 | 6_3:-99858061 | Msa0968630:CDS |
TGAAAATGAAGATGAGAATG+AGG | 0.513120 | 6_3:-99856148 | Msa0968630:CDS |
CCAGCTTGTGTAGTCTTCCA+AGG | 0.514469 | 6_3:-99855711 | Msa0968630:CDS |
GAGTGGAGGAGGAGGAGAGG+TGG | 0.516704 | 6_3:+99862151 | None:intergenic |
TGGAAGCGGGTGGCAATGGG+AGG | 0.526728 | 6_3:+99862171 | None:intergenic |
GTCTCTCTGTTGGATATGCA+AGG | 0.527770 | 6_3:-99854796 | Msa0968630:CDS |
GGACTGCAAAATATCTTCAC+CGG | 0.530976 | 6_3:+99856855 | None:intergenic |
ACAAGCCATACAAAATTTCA+CGG | 0.532141 | 6_3:+99853705 | None:intergenic |
AGGCAGCTATTTCCTCAAAT+GGG | 0.535456 | 6_3:+99858004 | None:intergenic |
TAAAAGGAAGTCTCGTCTGA+AGG | 0.536320 | 6_3:+99855486 | None:intergenic |
CAACCTCATTGGAATGTGCA+TGG | 0.536452 | 6_3:+99853633 | None:intergenic |
CATGGGTGTAGGAGATGTAA+AGG | 0.537512 | 6_3:-99853323 | Msa0968630:three_prime_UTR |
GGATCGATAATCATCATAGT+TGG | 0.540767 | 6_3:+99862192 | None:intergenic |
GGAGGAGAGGTGGAAGCGGG+TGG | 0.541643 | 6_3:+99862161 | None:intergenic |
ATCCCAAAGTCAATTTCTGA+TGG | 0.545465 | 6_3:+99856234 | None:intergenic |
GAAAATAAAGAAGAAAGTGT+TGG | 0.549548 | 6_3:-99855594 | Msa0968630:CDS |
TCCGGGGAAATGGAGTGCTC+GGG | 0.549685 | 6_3:+99858121 | None:intergenic |
GAGATTCGGATTCAAGAAAA+GGG | 0.555218 | 6_3:-99854249 | Msa0968630:intron |
ACAGGCTCCTGATCTGAGCT+AGG | 0.557261 | 6_3:+99858054 | None:intergenic |
GGTGGAGAAGAAAGAAGATG+AGG | 0.557609 | 6_3:+99862254 | None:intergenic |
GCCATCCTATCACCCATTTG+AGG | 0.558341 | 6_3:-99858016 | Msa0968630:CDS |
CATAATTGGTGTGGATACCA+TGG | 0.560333 | 6_3:-99856286 | Msa0968630:CDS |
TTGTGTACAGAAGTGAAGGC+AGG | 0.560544 | 6_3:-99853665 | Msa0968630:three_prime_UTR |
ACGAAGTAGACAAATCCAAA+AGG | 0.563854 | 6_3:-99862285 | Msa0968630:five_prime_UTR |
AAGTTGGAAAATAATGAGAA+TGG | 0.564533 | 6_3:-99855516 | Msa0968630:CDS |
AGAAATTGACTTTGGGATCG+AGG | 0.565424 | 6_3:-99856229 | Msa0968630:CDS |
CCTTGGAAGACTACACAAGC+TGG | 0.567061 | 6_3:+99855711 | None:intergenic |
ATCATACTTGCAGGCTACGT+CGG | 0.568148 | 6_3:-99853837 | Msa0968630:intron |
CATCTCAGAGATCATTTCCA+TGG | 0.568661 | 6_3:+99856269 | None:intergenic |
ACCCGAGCACTCCATTTCCC+CGG | 0.572551 | 6_3:-99858122 | Msa0968630:CDS |
CATGGAAATGATCTCTGAGA+TGG | 0.575487 | 6_3:-99856268 | Msa0968630:CDS |
GGTTAACAGCAAAGCAACAA+TGG | 0.576380 | 6_3:-99857075 | Msa0968630:CDS |
AAAAGGAAGTCTCGTCTGAA+GGG | 0.577512 | 6_3:+99855487 | None:intergenic |
AACCTCATTGGAATGTGCAT+GGG | 0.578014 | 6_3:+99853634 | None:intergenic |
CCATATTTGACAGATGAACA+TGG | 0.584747 | 6_3:-99856996 | Msa0968630:CDS |
TTTAGACCCGTGCAATGCAT+GGG | 0.585032 | 6_3:-99853340 | Msa0968630:three_prime_UTR |
GGAAATAGCTGCCTCCACAT+TGG | 0.585698 | 6_3:-99857995 | Msa0968630:CDS |
ATGATTGTGTACAGAAGTGA+AGG | 0.588464 | 6_3:-99853669 | Msa0968630:three_prime_UTR |
TATATCATTGAGTTGTCTCT+CGG | 0.590503 | 6_3:+99853805 | None:intergenic |
AAGCCCTTAAGTCTCTCTGT+TGG | 0.591338 | 6_3:-99854806 | Msa0968630:CDS |
CCGTTCAACGTGGAATGCGG+AGG | 0.602834 | 6_3:-99861782 | Msa0968630:CDS |
TCTCTCTGTTGGATATGCAA+GGG | 0.606977 | 6_3:-99854795 | Msa0968630:CDS |
GACTGCAAAATATCTTCACC+GGG | 0.607488 | 6_3:+99856856 | None:intergenic |
TTAAGAGAGATGCATAGTGG+TGG | 0.610697 | 6_3:+99862236 | None:intergenic |
TAACCGTTCAACGTGGAATG+CGG | 0.613140 | 6_3:-99861785 | Msa0968630:CDS |
TTGTTAAGAGAGATGCATAG+TGG | 0.616485 | 6_3:+99862233 | None:intergenic |
CAAGCCATACAAAATTTCAC+GGG | 0.617286 | 6_3:+99853706 | None:intergenic |
TGTGTACAGAAGTGAAGGCA+GGG | 0.619745 | 6_3:-99853664 | Msa0968630:three_prime_UTR |
CCCGTGCAATGCATGGGTGT+AGG | 0.623205 | 6_3:-99853334 | Msa0968630:three_prime_UTR |
TGGAATGCGGAGGATGTGAA+TGG | 0.625238 | 6_3:-99861772 | Msa0968630:CDS |
AATGCGGAGGATGTGAATGG+TGG | 0.626319 | 6_3:-99861769 | Msa0968630:CDS |
CTCAACCTGATGCTATTGCA+AGG | 0.627135 | 6_3:-99854887 | Msa0968630:CDS |
CCTACACCCATGCATTGCAC+GGG | 0.627991 | 6_3:+99853334 | None:intergenic |
ACGGAGATTGGAAAAGCGAG+TGG | 0.630678 | 6_3:+99862134 | None:intergenic |
GATATGCAAGGGTATTCAAG+TGG | 0.638092 | 6_3:-99854784 | Msa0968630:CDS |
CTCACTAATCTCCAATGTGG+AGG | 0.643018 | 6_3:+99857984 | None:intergenic |
ATGCAAGGGTATTCAAGTGG+AGG | 0.645083 | 6_3:-99854781 | Msa0968630:intron |
GAGATTGGAAAAGCGAGTGG+AGG | 0.645581 | 6_3:+99862137 | None:intergenic |
ATCCTCACTAATCTCCAATG+TGG | 0.656177 | 6_3:+99857981 | None:intergenic |
GGGGTCGGCACAGGACAACA+AGG | 0.658140 | 6_3:+99853552 | None:intergenic |
AACAAGTAGAACTGTTATCG+AGG | 0.659990 | 6_3:-99857938 | Msa0968630:intron |
TGAGAATGAGGATTATGACT+CGG | 0.665245 | 6_3:-99856136 | Msa0968630:intron |
TGACGATGAGCTTGACGATG+AGG | 0.666584 | 6_3:-99855983 | Msa0968630:CDS |
CTCCACATTGGAGATTAGTG+AGG | 0.667251 | 6_3:-99857983 | Msa0968630:CDS |
CAGATAATAACCGTTCAACG+TGG | 0.673542 | 6_3:-99861792 | Msa0968630:CDS |
GGACAACAAGGAAGTAACAG+AGG | 0.674207 | 6_3:+99853564 | None:intergenic |
GTCCCATGCACATTCCAATG+AGG | 0.679481 | 6_3:-99853636 | Msa0968630:three_prime_UTR |
TTCACAAGTTTGTTTCTCCG+GGG | 0.684542 | 6_3:+99858105 | None:intergenic |
GTAGCAAGTCATAATTGGTG+TGG | 0.693744 | 6_3:-99856295 | Msa0968630:intron |
GGAGGCACAACTTATCTGTG+TGG | 0.695572 | 6_3:-99854324 | Msa0968630:CDS |
TGGAAGACTACACAAGCTGG+AGG | 0.707383 | 6_3:+99855714 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAGAAAAGAAATTAAT+TGG | - | chr6_3:99854913-99854932 | Msa0968630:CDS | 10.0% |
!!! | CATAATTTTAAAAAAACATT+AGG | + | chr6_3:99855519-99855538 | None:intergenic | 10.0% |
!!! | GGTTATTTTTTTTATAATTT+TGG | - | chr6_3:99855969-99855988 | Msa0968630:CDS | 10.0% |
!! | AAAAAAGAAAAAAAAGAAAA+AGG | - | chr6_3:99856612-99856631 | Msa0968630:intron | 10.0% |
!!! | ATGGATATATTTAATTTAAA+AGG | - | chr6_3:99860314-99860333 | Msa0968630:intron | 10.0% |
!!! | TGGATATATTTAATTTAAAA+GGG | - | chr6_3:99860315-99860334 | Msa0968630:intron | 10.0% |
!!! | CGATTTTATATAAAATATAT+AGG | + | chr6_3:99861380-99861399 | None:intergenic | 10.0% |
!! | AACGTTTATAAAATAAAATT+AGG | + | chr6_3:99862096-99862115 | None:intergenic | 10.0% |
!!! | TCATTTTCTCAAATTATTAT+CGG | + | chr6_3:99853615-99853634 | None:intergenic | 15.0% |
!! | TTAAATGTAATTACATTTGT+CGG | - | chr6_3:99853640-99853659 | Msa0968630:three_prime_UTR | 15.0% |
!!! | AATTAATTGGTTTTTTGAAA+AGG | - | chr6_3:99854926-99854945 | Msa0968630:intron | 15.0% |
!!! | ATTAATTGGTTTTTTGAAAA+GGG | - | chr6_3:99854927-99854946 | Msa0968630:intron | 15.0% |
!! | TTAAGATTAAGATTAAGATT+TGG | - | chr6_3:99855161-99855180 | Msa0968630:intron | 15.0% |
!! | TTGTAAAAAGTTAAAAATTG+GGG | + | chr6_3:99855404-99855423 | None:intergenic | 15.0% |
!! | GTTGTAAAAAGTTAAAAATT+GGG | + | chr6_3:99855405-99855424 | None:intergenic | 15.0% |
!! | AGTTGTAAAAAGTTAAAAAT+TGG | + | chr6_3:99855406-99855425 | None:intergenic | 15.0% |
!!! | TTTTAAAAAAACATTAGGTA+CGG | + | chr6_3:99855514-99855533 | None:intergenic | 15.0% |
!! | ATAATTTGATATAATTATGC+AGG | - | chr6_3:99857406-99857425 | Msa0968630:intron | 15.0% |
!!! | TTAAAAATGTTAATACCTTT+TGG | + | chr6_3:99857932-99857951 | None:intergenic | 15.0% |
!!! | GGTATTAACATTTTTAAATA+AGG | - | chr6_3:99857935-99857954 | Msa0968630:intron | 15.0% |
!!! | AAAAATGCATAAATTTTGTT+TGG | - | chr6_3:99858206-99858225 | Msa0968630:intron | 15.0% |
!! | AATTTCATGATAATATTGTT+TGG | - | chr6_3:99858539-99858558 | Msa0968630:intron | 15.0% |
!!! | AAAATTATTTTCTGAAGTTA+GGG | + | chr6_3:99858736-99858755 | None:intergenic | 15.0% |
!!! | TTGTTTTTAATGTAATTATG+AGG | - | chr6_3:99859467-99859486 | Msa0968630:intron | 15.0% |
!! | TTGTTCATATTTATTGATAT+TGG | - | chr6_3:99860232-99860251 | Msa0968630:intron | 15.0% |
!!! | GGATATATTTAATTTAAAAG+GGG | - | chr6_3:99860316-99860335 | Msa0968630:intron | 15.0% |
!! | AAGAAAAAAAAAACTATAAC+AGG | - | chr6_3:99860356-99860375 | Msa0968630:intron | 15.0% |
!!! | TATTTATTCTAAGAAATATG+AGG | - | chr6_3:99860505-99860524 | Msa0968630:intron | 15.0% |
!! | AATAAATTTGTAGTTAAAAG+AGG | - | chr6_3:99861511-99861530 | Msa0968630:intron | 15.0% |
!! | ATAAATTTGTAGTTAAAAGA+GGG | - | chr6_3:99861512-99861531 | Msa0968630:intron | 15.0% |
!!! | TTTACAAAACTTCATAATTT+TGG | - | chr6_3:99861567-99861586 | Msa0968630:intron | 15.0% |
!!! | TTACAAAACTTCATAATTTT+GGG | - | chr6_3:99861568-99861587 | Msa0968630:intron | 15.0% |
!! | CTAATAACAACAAAAATGAT+AGG | + | chr6_3:99853906-99853925 | None:intergenic | 20.0% |
!!! | TTGTTGTTATTAGAGTTTAA+TGG | - | chr6_3:99853913-99853932 | Msa0968630:intron | 20.0% |
!!! | TTTGAAATAGTTTTGTGATT+TGG | - | chr6_3:99854015-99854034 | Msa0968630:intron | 20.0% |
!! | TGAAGTTATGAAAATTAGTT+TGG | - | chr6_3:99854131-99854150 | Msa0968630:intron | 20.0% |
!!! | TATGAAAATTAGTTTGGTTA+TGG | - | chr6_3:99854137-99854156 | Msa0968630:intron | 20.0% |
!!! | GATTTTCATATATAAGAATC+AGG | - | chr6_3:99854524-99854543 | Msa0968630:intron | 20.0% |
!! | TTTAAAAAAACATTAGGTAC+GGG | + | chr6_3:99855513-99855532 | None:intergenic | 20.0% |
!! | AAGTACGAGATAAAAAAAAA+GGG | + | chr6_3:99855731-99855750 | None:intergenic | 20.0% |
!! | TAGTATCATATGATGATTTA+AGG | - | chr6_3:99856104-99856123 | Msa0968630:intron | 20.0% |
!! | AGTATCATATGATGATTTAA+GGG | - | chr6_3:99856105-99856124 | Msa0968630:intron | 20.0% |
!! | TTAACTACAAGAAAAAAATG+AGG | + | chr6_3:99856477-99856496 | None:intergenic | 20.0% |
!!! | TCATTTTTTTCTTGTAGTTA+AGG | - | chr6_3:99856476-99856495 | Msa0968630:intron | 20.0% |
!! | AAAAGTTTATCTCAACAAAT+CGG | + | chr6_3:99856793-99856812 | None:intergenic | 20.0% |
!!! | TTTGTTTTGAGAATTTGAAT+TGG | - | chr6_3:99856810-99856829 | Msa0968630:intron | 20.0% |
!!! | TTGTTTTGAGAATTTGAATT+GGG | - | chr6_3:99856811-99856830 | Msa0968630:intron | 20.0% |
!!! | ATCATCTTAGGTTTTTATAT+TGG | - | chr6_3:99857098-99857117 | Msa0968630:intron | 20.0% |
!!! | TCATCTTAGGTTTTTATATT+GGG | - | chr6_3:99857099-99857118 | Msa0968630:intron | 20.0% |
!! | AATAAAATTTGGCAAACATT+TGG | - | chr6_3:99857676-99857695 | Msa0968630:intron | 20.0% |
!! | TAAATGCTAAAACCATAATT+AGG | - | chr6_3:99857835-99857854 | Msa0968630:intron | 20.0% |
!! | AAATGCTAAAACCATAATTA+GGG | - | chr6_3:99857836-99857855 | Msa0968630:intron | 20.0% |
!!! | CAGTATTTTCTAAAATGAAA+CGG | + | chr6_3:99857865-99857884 | None:intergenic | 20.0% |
!! | GTAGATAATTACAGATAAAT+AGG | - | chr6_3:99857997-99858016 | Msa0968630:CDS | 20.0% |
!! | AGATAAATAGGAGATTAAAT+TGG | - | chr6_3:99858009-99858028 | Msa0968630:CDS | 20.0% |
!! | CAAAACAAAGAAAAATACAA+TGG | + | chr6_3:99858035-99858054 | None:intergenic | 20.0% |
!! | TGCTTGTAGAATTTAATTAA+GGG | + | chr6_3:99858665-99858684 | None:intergenic | 20.0% |
!! | ATGCTTGTAGAATTTAATTA+AGG | + | chr6_3:99858666-99858685 | None:intergenic | 20.0% |
!!! | CAAAATTATTTTCTGAAGTT+AGG | + | chr6_3:99858737-99858756 | None:intergenic | 20.0% |
!!! | AACTTCAGAAAATAATTTTG+TGG | - | chr6_3:99858737-99858756 | Msa0968630:intron | 20.0% |
!! | AGAATTAAGATTAGAACAAA+AGG | + | chr6_3:99859183-99859202 | None:intergenic | 20.0% |
!!! | AATTTTTTAGCAAAATCCAT+TGG | + | chr6_3:99859663-99859682 | None:intergenic | 20.0% |
!!! | TTCTGTTACTTTACTAATTT+CGG | + | chr6_3:99859956-99859975 | None:intergenic | 20.0% |
!!! | TATTTATACCTTTTCTTTGT+TGG | - | chr6_3:99860596-99860615 | Msa0968630:intron | 20.0% |
!! | TAATGAGAAAACTTTCTTAA+TGG | + | chr6_3:99860940-99860959 | None:intergenic | 20.0% |
!!! | ATTACATTAACTTGTACTTT+TGG | + | chr6_3:99860971-99860990 | None:intergenic | 20.0% |
!! | TAAATTTGTAGTTAAAAGAG+GGG | - | chr6_3:99861513-99861532 | Msa0968630:intron | 20.0% |
!!! | CTTCATTGTGTTTAAAATTT+GGG | - | chr6_3:99861596-99861615 | Msa0968630:intron | 20.0% |
!! | TGTTGCATTTAATCAATAAT+TGG | - | chr6_3:99861966-99861985 | Msa0968630:intron | 20.0% |
!! | ATAAAATAAAATTAGGAGAC+AGG | + | chr6_3:99862089-99862108 | None:intergenic | 20.0% |
! | AAATATAACACTCAGCAAAT+GGG | + | chr6_3:99853533-99853552 | None:intergenic | 25.0% |
! | TAAATATAACACTCAGCAAA+TGG | + | chr6_3:99853534-99853553 | None:intergenic | 25.0% |
! | ACAGTTAAATAACAATACCA+CGG | + | chr6_3:99853882-99853901 | None:intergenic | 25.0% |
!! | AAAACTATTTTACACTGTCA+AGG | - | chr6_3:99854070-99854089 | Msa0968630:intron | 25.0% |
!!! | TCCTCTATTTTGATGATTTA+GGG | - | chr6_3:99854107-99854126 | Msa0968630:intron | 25.0% |
! | ACTTGTAAAATGTTGAAGTA+CGG | - | chr6_3:99854216-99854235 | Msa0968630:intron | 25.0% |
!! | AAAAAAAGTACAACAAGTAC+CGG | + | chr6_3:99854258-99854277 | None:intergenic | 25.0% |
!! | GACCTATAAATTTTGTAGTA+AGG | - | chr6_3:99854396-99854415 | Msa0968630:intron | 25.0% |
! | CTCCTTACTACAAAATTTAT+AGG | + | chr6_3:99854401-99854420 | None:intergenic | 25.0% |
!! | ATAAATTTTGTAGTAAGGAG+AGG | - | chr6_3:99854401-99854420 | Msa0968630:intron | 25.0% |
! | TAGTTCAAAATACACATCAA+AGG | - | chr6_3:99854693-99854712 | Msa0968630:intron | 25.0% |
! | GTCTTGAAAAATGAAAATGT+AGG | + | chr6_3:99854790-99854809 | None:intergenic | 25.0% |
! | TTGAAAAGGGAGTTTAATAT+TGG | - | chr6_3:99854940-99854959 | Msa0968630:intron | 25.0% |
! | TAATATTGGATATCATGTAG+TGG | - | chr6_3:99854954-99854973 | Msa0968630:intron | 25.0% |
!!! | TTTTTCAGAACCCTAAAAAA+AGG | - | chr6_3:99855084-99855103 | Msa0968630:intron | 25.0% |
!! | TTTTCAGAACCCTAAAAAAA+GGG | - | chr6_3:99855085-99855104 | Msa0968630:intron | 25.0% |
!! | TAATGAGTTGAATCGAAATA+TGG | - | chr6_3:99855194-99855213 | Msa0968630:intron | 25.0% |
! | TGGTTTATGATCAAACATTA+TGG | - | chr6_3:99855214-99855233 | Msa0968630:intron | 25.0% |
! | CAAGTACGAGATAAAAAAAA+AGG | + | chr6_3:99855732-99855751 | None:intergenic | 25.0% |
!! | TCATCAACAGAATTTTTACT+CGG | + | chr6_3:99855812-99855831 | None:intergenic | 25.0% |
! | TTTGTTAATTCATTTCTCTC+AGG | + | chr6_3:99857289-99857308 | None:intergenic | 25.0% |
! | GAAATACTATATGTAATGAG+AGG | - | chr6_3:99857377-99857396 | Msa0968630:intron | 25.0% |
! | CACAAGGAGAAAATAAAATT+TGG | - | chr6_3:99857665-99857684 | Msa0968630:intron | 25.0% |
!! | CATGTAATTTTCTTACATGA+AGG | - | chr6_3:99857792-99857811 | Msa0968630:intron | 25.0% |
!! | TGCTTGTTTAGAATTCATTT+AGG | - | chr6_3:99857895-99857914 | Msa0968630:intron | 25.0% |
!! | AAAATGTTAATACCTTTTGG+AGG | + | chr6_3:99857929-99857948 | None:intergenic | 25.0% |
! | CTGAAAGTTTAAATAACACA+TGG | + | chr6_3:99858061-99858080 | None:intergenic | 25.0% |
! | CATATTCAATAAGTCAAAAC+AGG | + | chr6_3:99858119-99858138 | None:intergenic | 25.0% |
! | TTATTGAATATGCGTAAGTT+GGG | - | chr6_3:99858127-99858146 | Msa0968630:CDS | 25.0% |
! | AATGCAGATATTCTCTATTA+GGG | + | chr6_3:99858167-99858186 | None:intergenic | 25.0% |
! | TAATGCAGATATTCTCTATT+AGG | + | chr6_3:99858168-99858187 | None:intergenic | 25.0% |
! | AATAGAGAATATCTGCATTA+TGG | - | chr6_3:99858168-99858187 | Msa0968630:intron | 25.0% |
! | GGAAAATCAATACATAGTAT+AGG | + | chr6_3:99858622-99858641 | None:intergenic | 25.0% |
! | CTTGTAGAATTTAATTAAGG+GGG | + | chr6_3:99858663-99858682 | None:intergenic | 25.0% |
! | GCTTGTAGAATTTAATTAAG+GGG | + | chr6_3:99858664-99858683 | None:intergenic | 25.0% |
!! | AATAATTTTGTGGTAAGACT+AGG | - | chr6_3:99858747-99858766 | Msa0968630:intron | 25.0% |
! | ACTGTTTGTAAGTATTTCAT+AGG | + | chr6_3:99858805-99858824 | None:intergenic | 25.0% |
! | ATGCCATTAATATAAGAACA+GGG | + | chr6_3:99858932-99858951 | None:intergenic | 25.0% |
! | AATGCCATTAATATAAGAAC+AGG | + | chr6_3:99858933-99858952 | None:intergenic | 25.0% |
! | AATGAACATCAAGAAAATGA+AGG | + | chr6_3:99858981-99859000 | None:intergenic | 25.0% |
! | AATTATTGTTGAAGTCCAAA+AGG | + | chr6_3:99859032-99859051 | None:intergenic | 25.0% |
!! | ATTTAATATCCTCACACTTT+TGG | - | chr6_3:99859049-99859068 | Msa0968630:intron | 25.0% |
!! | TTTAATATCCTCACACTTTT+GGG | - | chr6_3:99859050-99859069 | Msa0968630:intron | 25.0% |
! | AAAGTTTGCATATCTTAACA+AGG | - | chr6_3:99859223-99859242 | Msa0968630:intron | 25.0% |
! | TTATTCATATTATCGTTTGC+AGG | - | chr6_3:99859539-99859558 | Msa0968630:intron | 25.0% |
!! | TTTTGCTAAAAAATTGACTG+AGG | - | chr6_3:99859668-99859687 | Msa0968630:intron | 25.0% |
! | TGTTAATGTAACCTAATTTG+TGG | - | chr6_3:99859695-99859714 | Msa0968630:intron | 25.0% |
!! | TTTTCTGTTGCACTTTTATT+CGG | - | chr6_3:99859743-99859762 | Msa0968630:intron | 25.0% |
!! | GAAAATAAAGAAGAAAGTGT+TGG | - | chr6_3:99859973-99859992 | Msa0968630:intron | 25.0% |
! | AAGTTGGAAAATAATGAGAA+TGG | - | chr6_3:99860051-99860070 | Msa0968630:intron | 25.0% |
! | AATTTAGTGACTGCTTTAAT+TGG | - | chr6_3:99860268-99860287 | Msa0968630:intron | 25.0% |
! | CATACTCAGTTAAGAAATAA+TGG | - | chr6_3:99860295-99860314 | Msa0968630:intron | 25.0% |
!!! | ACCTAAAATTTTGACATCAA+TGG | - | chr6_3:99860403-99860422 | Msa0968630:intron | 25.0% |
!! | ACCATTGATGTCAAAATTTT+AGG | + | chr6_3:99860407-99860426 | None:intergenic | 25.0% |
! | CTCTTAATTCATAACTCAAT+TGG | - | chr6_3:99860457-99860476 | Msa0968630:intron | 25.0% |
!! | TTTAGTTTCCAACAAAGAAA+AGG | + | chr6_3:99860607-99860626 | None:intergenic | 25.0% |
! | GAGAAACTATGACTTATTAA+AGG | - | chr6_3:99861061-99861080 | Msa0968630:intron | 25.0% |
! | TAGAAATGATCAAATACCAT+TGG | - | chr6_3:99861104-99861123 | Msa0968630:intron | 25.0% |
! | AGAAATGATCAAATACCATT+GGG | - | chr6_3:99861105-99861124 | Msa0968630:intron | 25.0% |
!! | CTTAAGTGTTGTAAAAAGAA+TGG | + | chr6_3:99861160-99861179 | None:intergenic | 25.0% |
! | ACGTAAAAATAGTGAGATTT+AGG | - | chr6_3:99861440-99861459 | Msa0968630:intron | 25.0% |
! | CGTAAAAATAGTGAGATTTA+GGG | - | chr6_3:99861441-99861460 | Msa0968630:intron | 25.0% |
!! | GCTTCATTGTGTTTAAAATT+TGG | - | chr6_3:99861595-99861614 | Msa0968630:intron | 25.0% |
!! | ATCTGAAATCAGATATATGA+AGG | + | chr6_3:99861653-99861672 | None:intergenic | 25.0% |
! | ACTTAATATATCATACTTGC+AGG | - | chr6_3:99861721-99861740 | Msa0968630:intron | 25.0% |
GATAATCATCATAGTTGGTT+GGG | + | chr6_3:99853373-99853392 | None:intergenic | 30.0% | |
AATATAACACTCAGCAAATG+GGG | + | chr6_3:99853532-99853551 | None:intergenic | 30.0% | |
!! | AATCAGAAGTGTCAATGTTA+TGG | - | chr6_3:99853675-99853694 | Msa0968630:three_prime_UTR | 30.0% |
GATTGTTAGTTACTACTTAC+TGG | - | chr6_3:99853699-99853718 | Msa0968630:three_prime_UTR | 30.0% | |
!!! | GAAATAGTTTTGTGATTTGG+CGG | - | chr6_3:99854018-99854037 | Msa0968630:intron | 30.0% |
!!! | CTCCTCTATTTTGATGATTT+AGG | - | chr6_3:99854106-99854125 | Msa0968630:intron | 30.0% |
!!! | CCTCTATTTTGATGATTTAG+GGG | - | chr6_3:99854108-99854127 | Msa0968630:intron | 30.0% |
TGTGAATTTGTGGATACTTA+AGG | - | chr6_3:99854161-99854180 | Msa0968630:intron | 30.0% | |
TGGATACTTAAGGAAAGATT+AGG | - | chr6_3:99854171-99854190 | Msa0968630:intron | 30.0% | |
TCATTATTCTGTTGTGAGTA+AGG | - | chr6_3:99854281-99854300 | Msa0968630:CDS | 30.0% | |
! | GTTTCTCAGATAGTTTTTCT+AGG | + | chr6_3:99854456-99854475 | None:intergenic | 30.0% |
TTCAACCATATAAGCCTAAA+AGG | - | chr6_3:99854761-99854780 | Msa0968630:intron | 30.0% | |
!!! | TTTTTCAAGACATATGTCGT+AGG | - | chr6_3:99854799-99854818 | Msa0968630:CDS | 30.0% |
TAGGAAAAATGAGGAAGAAA+TGG | - | chr6_3:99854818-99854837 | Msa0968630:CDS | 30.0% | |
!! | ATGCTTTGAAATATCCAACA+TGG | - | chr6_3:99855022-99855041 | Msa0968630:intron | 30.0% |
! | GTATTTGAGTTTCTTTGTTG+TGG | - | chr6_3:99855371-99855390 | Msa0968630:intron | 30.0% |
TTATGTATTTCGTACTTGTG+AGG | - | chr6_3:99855534-99855553 | Msa0968630:CDS | 30.0% | |
TATGTATTTCGTACTTGTGA+GGG | - | chr6_3:99855535-99855554 | Msa0968630:CDS | 30.0% | |
GAGTAAAAATTCTGTTGATG+AGG | - | chr6_3:99855811-99855830 | Msa0968630:intron | 30.0% | |
!!! | TGGAAAGGTTATTTTGACAT+TGG | - | chr6_3:99855885-99855904 | Msa0968630:intron | 30.0% |
!!! | ATAATTTTGGGGTGAAATTG+TGG | - | chr6_3:99855982-99856001 | Msa0968630:CDS | 30.0% |
TACTAAGAATCACTGTAAGA+CGG | + | chr6_3:99856089-99856108 | None:intergenic | 30.0% | |
ATGATTTAAGGGTGAACTTA+TGG | - | chr6_3:99856116-99856135 | Msa0968630:intron | 30.0% | |
AGTTGCAATGTAATTGAAGT+TGG | - | chr6_3:99856155-99856174 | Msa0968630:CDS | 30.0% | |
TTGGGTTTGTGAAAAACTAT+TGG | - | chr6_3:99856242-99856261 | Msa0968630:CDS | 30.0% | |
ATTTGAGTGTGTATGGAAAA+TGG | + | chr6_3:99856275-99856294 | None:intergenic | 30.0% | |
ACAAATGTCAAGTGTGTTAA+TGG | - | chr6_3:99856339-99856358 | Msa0968630:intron | 30.0% | |
!! | ATGGTTGATTTGAATTCAGA+TGG | - | chr6_3:99856358-99856377 | Msa0968630:intron | 30.0% |
ATGGTAAATTGTGACTTCTT+AGG | - | chr6_3:99856377-99856396 | Msa0968630:intron | 30.0% | |
! | GTAGTTAAGGTATTTGAGTT+CGG | - | chr6_3:99856489-99856508 | Msa0968630:intron | 30.0% |
!! | AATGTGTTTCTAGAAGTAGA+TGG | + | chr6_3:99856522-99856541 | None:intergenic | 30.0% |
AAAAAGAAAAAGGTTTCTGC+AGG | - | chr6_3:99856622-99856641 | Msa0968630:intron | 30.0% | |
! | ACCTTGCACTCAATTTTTAT+CGG | + | chr6_3:99856680-99856699 | None:intergenic | 30.0% |
! | TTAGACTGTTGAGCTTTATA+TGG | - | chr6_3:99856748-99856767 | Msa0968630:intron | 30.0% |
TATGTAGTGTTATAACGCTT+GGG | + | chr6_3:99856879-99856898 | None:intergenic | 30.0% | |
CTAACTCATCCTTACAAAAT+CGG | - | chr6_3:99857123-99857142 | Msa0968630:intron | 30.0% | |
! | TGATTATAGTTTGTAGAGAG+TGG | + | chr6_3:99857167-99857186 | None:intergenic | 30.0% |
ACTCTCTACAAACTATAATC+AGG | - | chr6_3:99857166-99857185 | Msa0968630:intron | 30.0% | |
! | GCCTTATCTTTTATCAATGT+GGG | - | chr6_3:99857188-99857207 | Msa0968630:intron | 30.0% |
TCCCACATTGATAAAAGATA+AGG | + | chr6_3:99857192-99857211 | None:intergenic | 30.0% | |
AATCTTGGATGAAAGTTCTT+GGG | + | chr6_3:99857226-99857245 | None:intergenic | 30.0% | |
AAATCTTGGATGAAAGTTCT+TGG | + | chr6_3:99857227-99857246 | None:intergenic | 30.0% | |
! | TTTCAAAGTAATGTCACTTC+AGG | + | chr6_3:99857251-99857270 | None:intergenic | 30.0% |
! | ATGCAAATTTTGTGACTTCT+TGG | - | chr6_3:99857308-99857327 | Msa0968630:intron | 30.0% |
!! | AGTATTTCTAGACACATGAA+AGG | + | chr6_3:99857365-99857384 | None:intergenic | 30.0% |
!! | AGGTACTAATTTGTTTCACA+AGG | - | chr6_3:99857649-99857668 | Msa0968630:intron | 30.0% |
AATTACATGCTTTGTAGCAT+AGG | + | chr6_3:99857781-99857800 | None:intergenic | 30.0% | |
CTTATTGAATATGCGTAAGT+TGG | - | chr6_3:99858126-99858145 | Msa0968630:CDS | 30.0% | |
AATTCTGTCAAAAGAAACAG+TGG | + | chr6_3:99858258-99858277 | None:intergenic | 30.0% | |
ATATGAAGATGAAGGATGAA+AGG | + | chr6_3:99858326-99858345 | None:intergenic | 30.0% | |
CCAGATTTATATGAAGATGA+AGG | + | chr6_3:99858334-99858353 | None:intergenic | 30.0% | |
CCTTCATCTTCATATAAATC+TGG | - | chr6_3:99858331-99858350 | Msa0968630:intron | 30.0% | |
!! | GATTGTGGCATATCATTTTT+AGG | - | chr6_3:99858471-99858490 | Msa0968630:intron | 30.0% |
!!! | TGTATTGATTTTCCTGTTCT+TGG | - | chr6_3:99858628-99858647 | Msa0968630:intron | 30.0% |
!!! | GTATTGATTTTCCTGTTCTT+GGG | - | chr6_3:99858629-99858648 | Msa0968630:intron | 30.0% |
!! | ATATATTTTCAAGCAAAGCC+CGG | - | chr6_3:99858693-99858712 | Msa0968630:intron | 30.0% |
AAACTGTAAGTATGTGAGAA+TGG | + | chr6_3:99858837-99858856 | None:intergenic | 30.0% | |
!!! | TGTCTACTTTTTAGAGTAGA+AGG | + | chr6_3:99858870-99858889 | None:intergenic | 30.0% |
AAAAGTAGACATGTACTTTG+AGG | - | chr6_3:99858879-99858898 | Msa0968630:intron | 30.0% | |
TGACCCTGTTCTTATATTAA+TGG | - | chr6_3:99858926-99858945 | Msa0968630:intron | 30.0% | |
TCAATTGAGCAAACAAATCA+TGG | + | chr6_3:99859118-99859137 | None:intergenic | 30.0% | |
TGCATATCTTAACAAGGTTA+TGG | - | chr6_3:99859229-99859248 | Msa0968630:intron | 30.0% | |
!! | ATTATGACTTGCTACAACAA+GGG | + | chr6_3:99859267-99859286 | None:intergenic | 30.0% |
!! | AATTATGACTTGCTACAACA+AGG | + | chr6_3:99859268-99859287 | None:intergenic | 30.0% |
TTGTTGTAGCAAGTCATAAT+TGG | - | chr6_3:99859267-99859286 | Msa0968630:intron | 30.0% | |
TGAAAATGAAGATGAGAATG+AGG | - | chr6_3:99859419-99859438 | Msa0968630:intron | 30.0% | |
! | GAATAAAAGTGCAACAGAAA+AGG | + | chr6_3:99859744-99859763 | None:intergenic | 30.0% |
! | TGCACTTTTATTCGGTTTAT+TGG | - | chr6_3:99859751-99859770 | Msa0968630:intron | 30.0% |
! | GAATTTTCTTCAATAAACGC+AGG | + | chr6_3:99859892-99859911 | None:intergenic | 30.0% |
AACAATCTCCAATCTGTAAA+AGG | + | chr6_3:99860100-99860119 | None:intergenic | 30.0% | |
GAATAAATAAGCCAGCAAAT+AGG | + | chr6_3:99860494-99860513 | None:intergenic | 30.0% | |
TGCTACAAACATTCTTATTC+CGG | + | chr6_3:99861027-99861046 | None:intergenic | 30.0% | |
GAAATGATCAAATACCATTG+GGG | - | chr6_3:99861106-99861125 | Msa0968630:intron | 30.0% | |
! | TGTTGATTACAATTCATTGC+AGG | - | chr6_3:99861222-99861241 | Msa0968630:intron | 30.0% |
! | TATATCATTGAGTTGTCTCT+CGG | + | chr6_3:99861765-99861784 | None:intergenic | 30.0% |
ACAAGCCATACAAAATTTCA+CGG | + | chr6_3:99861865-99861884 | None:intergenic | 30.0% | |
CAAAAATTACACAACCTCAT+TGG | + | chr6_3:99861948-99861967 | None:intergenic | 30.0% | |
ACGAAGTAGACAAATCCAAA+AGG | - | chr6_3:99853282-99853301 | Msa0968630:three_prime_UTR | 35.0% | |
TTGTTAAGAGAGATGCATAG+TGG | + | chr6_3:99853337-99853356 | None:intergenic | 35.0% | |
CGATAATCATCATAGTTGGT+TGG | + | chr6_3:99853374-99853393 | None:intergenic | 35.0% | |
GGATCGATAATCATCATAGT+TGG | + | chr6_3:99853378-99853397 | None:intergenic | 35.0% | |
TAGTTCTTACTACGAGATAC+CGG | - | chr6_3:99853575-99853594 | Msa0968630:three_prime_UTR | 35.0% | |
AGTTGTATGACATAGCAGAT+TGG | + | chr6_3:99853992-99854011 | None:intergenic | 35.0% | |
CCCCTAAATCATCAAAATAG+AGG | + | chr6_3:99854111-99854130 | None:intergenic | 35.0% | |
TGGTTATGGTTGTGAATTTG+TGG | - | chr6_3:99854151-99854170 | Msa0968630:intron | 35.0% | |
!! | ACCATATTAGAGAGAGTGTT+AGG | - | chr6_3:99854309-99854328 | Msa0968630:CDS | 35.0% |
!! | CCATATTAGAGAGAGTGTTA+GGG | - | chr6_3:99854310-99854329 | Msa0968630:CDS | 35.0% |
CAGAAAAGATGGTAGAAAAC+AGG | - | chr6_3:99854345-99854364 | Msa0968630:intron | 35.0% | |
! | GAAAATGTAGGTGACCTTTT+AGG | + | chr6_3:99854778-99854797 | None:intergenic | 35.0% |
CATATGTCGTAGGAAAAATG+AGG | - | chr6_3:99854809-99854828 | Msa0968630:CDS | 35.0% | |
AATCTAAACCCAAAAGTCTG+CGG | + | chr6_3:99854852-99854871 | None:intergenic | 35.0% | |
GAAGGAGAAAGGAGAAAAAA+GGG | - | chr6_3:99854874-99854893 | Msa0968630:CDS | 35.0% | |
!! | GCTGATTTTGTGATAGCATT+TGG | + | chr6_3:99854983-99855002 | None:intergenic | 35.0% |
TTGAAATATCCAACATGGCA+TGG | - | chr6_3:99855027-99855046 | Msa0968630:intron | 35.0% | |
TGAAATATCCAACATGGCAT+GGG | - | chr6_3:99855028-99855047 | Msa0968630:intron | 35.0% | |
ATAATATGGGATCGTCTACA+TGG | + | chr6_3:99855251-99855270 | None:intergenic | 35.0% | |
ATGTAGACGATCCCATATTA+TGG | - | chr6_3:99855250-99855269 | Msa0968630:intron | 35.0% | |
TGTAGACGATCCCATATTAT+GGG | - | chr6_3:99855251-99855270 | Msa0968630:intron | 35.0% | |
CAAGTCTTTGCCCATAATAT+GGG | + | chr6_3:99855264-99855283 | None:intergenic | 35.0% | |
AAAAAACATTAGGTACGGGT+AGG | + | chr6_3:99855509-99855528 | None:intergenic | 35.0% | |
ATGTATTTCGTACTTGTGAG+GGG | - | chr6_3:99855536-99855555 | Msa0968630:CDS | 35.0% | |
!!! | TTACCCTGTTTTTACACAAG+AGG | + | chr6_3:99855632-99855651 | None:intergenic | 35.0% |
TCTTGTGTAAAAACAGGGTA+AGG | - | chr6_3:99855631-99855650 | Msa0968630:CDS | 35.0% | |
GATAAAAAAAAAGGGCAACC+CGG | + | chr6_3:99855723-99855742 | None:intergenic | 35.0% | |
ACCTTTCCAGAATCTTTACT+CGG | + | chr6_3:99855874-99855893 | None:intergenic | 35.0% | |
! | TGTGGAAGTTAGTTAAGTTG+TGG | - | chr6_3:99856000-99856019 | Msa0968630:CDS | 35.0% |
! | GTTAGTTAAGTTGTGGTTTG+TGG | - | chr6_3:99856007-99856026 | Msa0968630:CDS | 35.0% |
! | TAGTTTTTCACAAACCCAAG+AGG | + | chr6_3:99856241-99856260 | None:intergenic | 35.0% |
!! | ACTGTTGATTTGAGTGTGTA+TGG | + | chr6_3:99856282-99856301 | None:intergenic | 35.0% |
! | GAGGTATTTCACATGACATT+TGG | + | chr6_3:99856458-99856477 | None:intergenic | 35.0% |
! | TTCTAGAAGTAGATGGATGA+AGG | + | chr6_3:99856515-99856534 | None:intergenic | 35.0% |
AAAGGTTTCTGCAGGTTTAT+AGG | - | chr6_3:99856630-99856649 | Msa0968630:intron | 35.0% | |
! | CCTTGCACTCAATTTTTATC+GGG | + | chr6_3:99856679-99856698 | None:intergenic | 35.0% |
! | AAGCTCAACAGTCTAAAGTA+GGG | + | chr6_3:99856744-99856763 | None:intergenic | 35.0% |
! | AAAGCTCAACAGTCTAAAGT+AGG | + | chr6_3:99856745-99856764 | None:intergenic | 35.0% |
CTATGTAGTGTTATAACGCT+TGG | + | chr6_3:99856880-99856899 | None:intergenic | 35.0% | |
CAAGCGTTATAACACTACAT+AGG | - | chr6_3:99856878-99856897 | Msa0968630:CDS | 35.0% | |
! | ATAGGCTCTGATATCATCTT+AGG | - | chr6_3:99857086-99857105 | Msa0968630:intron | 35.0% |
! | CGATTTTGTAAGGATGAGTT+AGG | + | chr6_3:99857125-99857144 | None:intergenic | 35.0% |
!! | GGCCTTATCTTTTATCAATG+TGG | - | chr6_3:99857187-99857206 | Msa0968630:intron | 35.0% |
! | TCTTTTATCAATGTGGGACT+TGG | - | chr6_3:99857194-99857213 | Msa0968630:intron | 35.0% |
! | ATGTCACTTCAGGAAAATCT+TGG | + | chr6_3:99857241-99857260 | None:intergenic | 35.0% |
! | TCTTCACAAGTTTGTTTCTC+CGG | + | chr6_3:99857467-99857486 | None:intergenic | 35.0% |
!! | GGCTTCTCATTTTTCTTTAC+AGG | + | chr6_3:99857534-99857553 | None:intergenic | 35.0% |
TATTTCCTCAAATGGGTGAT+AGG | + | chr6_3:99857559-99857578 | None:intergenic | 35.0% | |
AACAAGTAGAACTGTTATCG+AGG | - | chr6_3:99857629-99857648 | Msa0968630:intron | 35.0% | |
!!! | TCAGTGCTATTTTTGTACGA+CGG | - | chr6_3:99857709-99857728 | Msa0968630:intron | 35.0% |
TGAAACGGAAACCCTAATTA+TGG | + | chr6_3:99857850-99857869 | None:intergenic | 35.0% | |
TGCACTAGAAAGGAAAATTC+TGG | + | chr6_3:99858095-99858114 | None:intergenic | 35.0% | |
TATCTGCATTATGGAAAGTC+TGG | - | chr6_3:99858177-99858196 | Msa0968630:intron | 35.0% | |
! | CATTTTCATTGCATCAGTTG+AGG | + | chr6_3:99858362-99858381 | None:intergenic | 35.0% |
! | TGTATAGCTGATGATGATTG+TGG | - | chr6_3:99858456-99858475 | Msa0968630:intron | 35.0% |
TCTGTCAAATATGGCAAATC+TGG | + | chr6_3:99858565-99858584 | None:intergenic | 35.0% | |
CCATGTTCATCTGTCAAATA+TGG | + | chr6_3:99858574-99858593 | None:intergenic | 35.0% | |
CCATATTTGACAGATGAACA+TGG | - | chr6_3:99858571-99858590 | Msa0968630:intron | 35.0% | |
ATGAACATGGAAGTAAGTGA+TGG | - | chr6_3:99858584-99858603 | Msa0968630:intron | 35.0% | |
TCTAACCTTGTAGATAATGC+TGG | - | chr6_3:99858772-99858791 | Msa0968630:intron | 35.0% | |
AAACTCACCATACCTAGATT+CGG | - | chr6_3:99858903-99858922 | Msa0968630:intron | 35.0% | |
!! | AACTGTAATTTGCCACCTTT+TGG | - | chr6_3:99859014-99859033 | Msa0968630:intron | 35.0% |
TATTGTTGAAGTCCAAAAGG+TGG | + | chr6_3:99859029-99859048 | None:intergenic | 35.0% | |
GAGCAAACAAATCATGGATA+AGG | + | chr6_3:99859112-99859131 | None:intergenic | 35.0% | |
! | GTCCATCAGAAATTGACTTT+GGG | - | chr6_3:99859331-99859350 | Msa0968630:intron | 35.0% |
ATCCCAAAGTCAATTTCTGA+TGG | + | chr6_3:99859336-99859355 | None:intergenic | 35.0% | |
TGAGAATGAGGATTATGACT+CGG | - | chr6_3:99859431-99859450 | Msa0968630:intron | 35.0% | |
ATGTGACATCAGTTGAGAAA+TGG | + | chr6_3:99859501-99859520 | None:intergenic | 35.0% | |
CATATTATCGTTTGCAGGAA+TGG | - | chr6_3:99859544-99859563 | Msa0968630:intron | 35.0% | |
!! | GTAACCTAATTTGTGGCTTT+TGG | - | chr6_3:99859702-99859721 | Msa0968630:intron | 35.0% |
CTTCAGATGATCCAATTGAT+TGG | - | chr6_3:99859821-99859840 | Msa0968630:intron | 35.0% | |
AGATGATCCAATTGATTGGA+TGG | - | chr6_3:99859825-99859844 | Msa0968630:intron | 35.0% | |
GCAGATATATGCTTCTGTAT+TGG | + | chr6_3:99859916-99859935 | None:intergenic | 35.0% | |
TTTACTAATTTCGGCAGTAC+TGG | + | chr6_3:99859947-99859966 | None:intergenic | 35.0% | |
!! | GAAAGTGTTGGTGTGATTAA+TGG | - | chr6_3:99859985-99860004 | Msa0968630:intron | 35.0% |
AGATAACGCATCACAAAAGT+TGG | - | chr6_3:99860035-99860054 | Msa0968630:intron | 35.0% | |
! | ATTCAAGTGTTTTCTGCACA+CGG | - | chr6_3:99860123-99860142 | Msa0968630:intron | 35.0% |
ATACAAGTCAGCTAACTTAC+GGG | + | chr6_3:99860153-99860172 | None:intergenic | 35.0% | |
CATACAAGTCAGCTAACTTA+CGG | + | chr6_3:99860154-99860173 | None:intergenic | 35.0% | |
AAAGTGCAATGATCAACCTT+AGG | + | chr6_3:99860214-99860233 | None:intergenic | 35.0% | |
! | GAAATATCTGAAGTTGTTGC+AGG | + | chr6_3:99860438-99860457 | None:intergenic | 35.0% |
TAATCAACGATCCTATTTGC+TGG | - | chr6_3:99860480-99860499 | Msa0968630:intron | 35.0% | |
TATTATCAACACTGAACCCT+GGG | + | chr6_3:99860540-99860559 | None:intergenic | 35.0% | |
ATATTATCAACACTGAACCC+TGG | + | chr6_3:99860541-99860560 | None:intergenic | 35.0% | |
! | TTTATGTTCTGATTTTGCGC+AGG | - | chr6_3:99860627-99860646 | Msa0968630:intron | 35.0% |
ATATCTCATTTGAAAGCTGC+TGG | - | chr6_3:99860718-99860737 | Msa0968630:intron | 35.0% | |
TATCCAACAGAGAGACTTAA+GGG | + | chr6_3:99860767-99860786 | None:intergenic | 35.0% | |
ATATCCAACAGAGAGACTTA+AGG | + | chr6_3:99860768-99860787 | None:intergenic | 35.0% | |
TCCTAGTTTCCACAGTTAAA+TGG | - | chr6_3:99860879-99860898 | Msa0968630:intron | 35.0% | |
ACCATTTAACTGTGGAAACT+AGG | + | chr6_3:99860883-99860902 | None:intergenic | 35.0% | |
CATTTCACTACTATACATGC+CGG | - | chr6_3:99861005-99861024 | Msa0968630:intron | 35.0% | |
AAAGAATGGAACAGATGACA+AGG | + | chr6_3:99861146-99861165 | None:intergenic | 35.0% | |
TACATTTGCCATGTTACAGT+TGG | - | chr6_3:99861192-99861211 | Msa0968630:intron | 35.0% | |
ATTGATCACCAACTGTAACA+TGG | + | chr6_3:99861203-99861222 | None:intergenic | 35.0% | |
TGATTACAATTCATTGCAGG+AGG | - | chr6_3:99861225-99861244 | Msa0968630:intron | 35.0% | |
CAAGTTCAAACACTGAGATT+CGG | - | chr6_3:99861304-99861323 | Msa0968630:intron | 35.0% | |
TGAGATTCGGATTCAAGAAA+AGG | - | chr6_3:99861317-99861336 | Msa0968630:intron | 35.0% | |
GAGATTCGGATTCAAGAAAA+GGG | - | chr6_3:99861318-99861337 | Msa0968630:intron | 35.0% | |
GTATTAGGATGTGTAGTACA+AGG | + | chr6_3:99861409-99861428 | None:intergenic | 35.0% | |
ACGTAGCTCGTATTTGTATT+AGG | + | chr6_3:99861424-99861443 | None:intergenic | 35.0% | |
AGCTCGTTCGAAATAAAAAG+TGG | - | chr6_3:99861474-99861493 | Msa0968630:intron | 35.0% | |
TATGAAGGTTGTGTTTGTCA+AGG | + | chr6_3:99861638-99861657 | None:intergenic | 35.0% | |
!!! | GCTTCGTTTTTTGTTGCTTT+GGG | + | chr6_3:99861805-99861824 | None:intergenic | 35.0% |
!!! | TGCTTCGTTTTTTGTTGCTT+TGG | + | chr6_3:99861806-99861825 | None:intergenic | 35.0% |
CAAGCCATACAAAATTTCAC+GGG | + | chr6_3:99861864-99861883 | None:intergenic | 35.0% | |
! | TTGTATGGCTTGTATGACTT+TGG | - | chr6_3:99861872-99861891 | Msa0968630:intron | 35.0% |
TCACTTCTGTACACAATCAT+TGG | + | chr6_3:99861898-99861917 | None:intergenic | 35.0% | |
ATGATTGTGTACAGAAGTGA+AGG | - | chr6_3:99861898-99861917 | Msa0968630:intron | 35.0% | |
! | GATGAGGTACACTTTCCTTT+TGG | + | chr6_3:99853300-99853319 | None:intergenic | 40.0% |
TTAAGAGAGATGCATAGTGG+TGG | + | chr6_3:99853334-99853353 | None:intergenic | 40.0% | |
CAGATAATAACCGTTCAACG+TGG | - | chr6_3:99853775-99853794 | Msa0968630:CDS | 40.0% | |
CCCTAACACTCTCTCTAATA+TGG | + | chr6_3:99854313-99854332 | None:intergenic | 40.0% | |
! | TCTACCATCTTTTCTGCCAT+AGG | + | chr6_3:99854341-99854360 | None:intergenic | 40.0% |
AGATGGTAGAAAACAGGCTT+AGG | - | chr6_3:99854351-99854370 | Msa0968630:intron | 40.0% | |
TGTATGACGAGTTGCAACTT+CGG | + | chr6_3:99854630-99854649 | None:intergenic | 40.0% | |
! | GGTGACCTTTTAGGCTTATA+TGG | + | chr6_3:99854769-99854788 | None:intergenic | 40.0% |
! | TTGAAAACCCGCAGACTTTT+GGG | - | chr6_3:99854841-99854860 | Msa0968630:CDS | 40.0% |
ATCTAAACCCAAAAGTCTGC+GGG | + | chr6_3:99854851-99854870 | None:intergenic | 40.0% | |
!!! | CTTTTGGGTTTAGATTGCGA+AGG | - | chr6_3:99854856-99854875 | Msa0968630:CDS | 40.0% |
GTTTAGATTGCGAAGGAGAA+AGG | - | chr6_3:99854863-99854882 | Msa0968630:CDS | 40.0% | |
CGAAGGAGAAAGGAGAAAAA+AGG | - | chr6_3:99854873-99854892 | Msa0968630:CDS | 40.0% | |
GCTATCACAAAATCAGCAAG+TGG | - | chr6_3:99854986-99855005 | Msa0968630:intron | 40.0% | |
TCAGAACCCTAAAAAAAGGG+CGG | - | chr6_3:99855088-99855107 | Msa0968630:intron | 40.0% | |
!!! | CTAATCCCGCCCTTTTTTTA+GGG | + | chr6_3:99855097-99855116 | None:intergenic | 40.0% |
CTAAAAAAAGGGCGGGATTA+GGG | - | chr6_3:99855096-99855115 | Msa0968630:intron | 40.0% | |
CCAAGTCTTTGCCCATAATA+TGG | + | chr6_3:99855265-99855284 | None:intergenic | 40.0% | |
CCATATTATGGGCAAAGACT+TGG | - | chr6_3:99855262-99855281 | Msa0968630:intron | 40.0% | |
GTTGTTGTCATGTGACTGAA+AGG | - | chr6_3:99855581-99855600 | Msa0968630:CDS | 40.0% | |
ACAGCCTCTTGTGTAAAAAC+AGG | - | chr6_3:99855625-99855644 | Msa0968630:CDS | 40.0% | |
CAGCCTCTTGTGTAAAAACA+GGG | - | chr6_3:99855626-99855645 | Msa0968630:CDS | 40.0% | |
GTTGCGTACAATACACCAAA+TGG | - | chr6_3:99855653-99855672 | Msa0968630:CDS | 40.0% | |
CGTACAATACACCAAATGGT+GGG | - | chr6_3:99855657-99855676 | Msa0968630:CDS | 40.0% | |
TACTTGTACGTATGCATCCT+TGG | - | chr6_3:99855746-99855765 | Msa0968630:CDS | 40.0% | |
! | GCATCCTTGGTTGATGTTAT+TGG | - | chr6_3:99855759-99855778 | Msa0968630:intron | 40.0% |
ACAGCCAATAACATCAACCA+AGG | + | chr6_3:99855766-99855785 | None:intergenic | 40.0% | |
! | GATGTTATTGGCTGTAATCG+TGG | - | chr6_3:99855771-99855790 | Msa0968630:intron | 40.0% |
TTTACTCGGAGGTTATCATG+AGG | + | chr6_3:99855860-99855879 | None:intergenic | 40.0% | |
TAACCTCCGAGTAAAGATTC+TGG | - | chr6_3:99855865-99855884 | Msa0968630:intron | 40.0% | |
TTTCCAGAATCTTTACTCGG+AGG | + | chr6_3:99855871-99855890 | None:intergenic | 40.0% | |
! | TCCGAGTAAAGATTCTGGAA+AGG | - | chr6_3:99855870-99855889 | Msa0968630:intron | 40.0% |
TGCAATGTAACTGTGGTTAG+AGG | - | chr6_3:99855909-99855928 | Msa0968630:CDS | 40.0% | |
GCAATGTAACTGTGGTTAGA+GGG | - | chr6_3:99855910-99855929 | Msa0968630:CDS | 40.0% | |
AGAATCACAGTTAAACTCGG+TGG | + | chr6_3:99855947-99855966 | None:intergenic | 40.0% | |
CGCAGAATCACAGTTAAACT+CGG | + | chr6_3:99855950-99855969 | None:intergenic | 40.0% | |
CGAGTTTAACTGTGATTCTG+CGG | - | chr6_3:99855948-99855967 | Msa0968630:CDS | 40.0% | |
AATAGTATAGTGCAGCCTCT+TGG | - | chr6_3:99856223-99856242 | Msa0968630:CDS | 40.0% | |
ATAGTATAGTGCAGCCTCTT+GGG | - | chr6_3:99856224-99856243 | Msa0968630:CDS | 40.0% | |
GAGTGTGTATGGAAAATGGT+AGG | + | chr6_3:99856271-99856290 | None:intergenic | 40.0% | |
CCCGATAAAAATTGAGTGCA+AGG | - | chr6_3:99856676-99856695 | Msa0968630:intron | 40.0% | |
ACCTGATCTAAACCATCTCA+TGG | - | chr6_3:99856714-99856733 | Msa0968630:intron | 40.0% | |
TCCATGAGATGGTTTAGATC+AGG | + | chr6_3:99856718-99856737 | None:intergenic | 40.0% | |
!!! | AGCTGGTTTTGTAAGGTTGA+GGG | + | chr6_3:99856840-99856859 | None:intergenic | 40.0% |
!!! | AAGCTGGTTTTGTAAGGTTG+AGG | + | chr6_3:99856841-99856860 | None:intergenic | 40.0% |
!!! | CCTTACAAGCTGGTTTTGTA+AGG | + | chr6_3:99856847-99856866 | None:intergenic | 40.0% |
CCTTACAAAACCAGCTTGTA+AGG | - | chr6_3:99856844-99856863 | Msa0968630:CDS | 40.0% | |
TCCCACATTTCCTAGAGATA+CGG | + | chr6_3:99856904-99856923 | None:intergenic | 40.0% | |
CCTATCGTAGATCTGTTGTT+GGG | + | chr6_3:99857071-99857090 | None:intergenic | 40.0% | |
!! | CCTTACAAGCCGATTTTGTA+AGG | + | chr6_3:99857135-99857154 | None:intergenic | 40.0% |
!! | CCTTACAAAATCGGCTTGTA+AGG | - | chr6_3:99857132-99857151 | Msa0968630:intron | 40.0% |
! | TTCACAAGTTTGTTTCTCCG+GGG | + | chr6_3:99857465-99857484 | None:intergenic | 40.0% |
! | CTTCACAAGTTTGTTTCTCC+GGG | + | chr6_3:99857466-99857485 | None:intergenic | 40.0% |
! | AGGCAGCTATTTCCTCAAAT+GGG | + | chr6_3:99857566-99857585 | None:intergenic | 40.0% |
ATCCTCACTAATCTCCAATG+TGG | + | chr6_3:99857589-99857608 | None:intergenic | 40.0% | |
AGTAACAAAACCACACTGCT+TGG | - | chr6_3:99857732-99857751 | Msa0968630:intron | 40.0% | |
ATCATGTAAACCAAGCAGTG+TGG | + | chr6_3:99857745-99857764 | None:intergenic | 40.0% | |
ACACTGCTTGGTTTACATGA+TGG | - | chr6_3:99857744-99857763 | Msa0968630:intron | 40.0% | |
!! | TGTTAATACCTTTTGGAGGC+AGG | + | chr6_3:99857925-99857944 | None:intergenic | 40.0% |
TCATTGCATCAGTTGAGGTT+GGG | + | chr6_3:99858357-99858376 | None:intergenic | 40.0% | |
TTCATTGCATCAGTTGAGGT+TGG | + | chr6_3:99858358-99858377 | None:intergenic | 40.0% | |
GGTTAACAGCAAAGCAACAA+TGG | - | chr6_3:99858492-99858511 | Msa0968630:intron | 40.0% | |
GACTGCAAAATATCTTCACC+GGG | + | chr6_3:99858714-99858733 | None:intergenic | 40.0% | |
GGACTGCAAAATATCTTCAC+CGG | + | chr6_3:99858715-99858734 | None:intergenic | 40.0% | |
ACTCTCCAGCATTATCTACA+AGG | + | chr6_3:99858780-99858799 | None:intergenic | 40.0% | |
GTAGCAAGTCATAATTGGTG+TGG | - | chr6_3:99859272-99859291 | Msa0968630:intron | 40.0% | |
CATAATTGGTGTGGATACCA+TGG | - | chr6_3:99859281-99859300 | Msa0968630:intron | 40.0% | |
CATCTCAGAGATCATTTCCA+TGG | + | chr6_3:99859301-99859320 | None:intergenic | 40.0% | |
! | CATGGAAATGATCTCTGAGA+TGG | - | chr6_3:99859299-99859318 | Msa0968630:intron | 40.0% |
! | GGTCCATCAGAAATTGACTT+TGG | - | chr6_3:99859330-99859349 | Msa0968630:intron | 40.0% |
!! | AGAAATTGACTTTGGGATCG+AGG | - | chr6_3:99859338-99859357 | Msa0968630:intron | 40.0% |
! | GATGCGATTTTCTCATCCAA+TGG | - | chr6_3:99859644-99859663 | Msa0968630:intron | 40.0% |
GTCTCCAAAAGCCACAAATT+AGG | + | chr6_3:99859709-99859728 | None:intergenic | 40.0% | |
AAAAGGAAGTCTCGTCTGAA+GGG | + | chr6_3:99860083-99860102 | None:intergenic | 40.0% | |
TAAAAGGAAGTCTCGTCTGA+AGG | + | chr6_3:99860084-99860103 | None:intergenic | 40.0% | |
! | CGAGACTTCCTTTTACAGAT+TGG | - | chr6_3:99860089-99860108 | Msa0968630:intron | 40.0% |
TCGTGTAGTCTTCTACTTCA+AGG | + | chr6_3:99860657-99860676 | None:intergenic | 40.0% | |
TCTCTCTGTTGGATATGCAA+GGG | - | chr6_3:99860772-99860791 | Msa0968630:intron | 40.0% | |
!! | GATATGCAAGGGTATTCAAG+TGG | - | chr6_3:99860783-99860802 | Msa0968630:intron | 40.0% |
! | TGTCTTCGATGCACTTTTGA+TGG | - | chr6_3:99860832-99860851 | Msa0968630:intron | 40.0% |
! | GTCTTCGATGCACTTTTGAT+GGG | - | chr6_3:99860833-99860852 | Msa0968630:intron | 40.0% |
AAGGTAATGAACTTCCCCAA+TGG | + | chr6_3:99861123-99861142 | None:intergenic | 40.0% | |
AATGGAACAGATGACAAGGA+AGG | + | chr6_3:99861142-99861161 | None:intergenic | 40.0% | |
! | TTTGACGTAAGGGTTTGTTC+AGG | - | chr6_3:99861277-99861296 | Msa0968630:intron | 40.0% |
!! | TGTTGCTTTGGGTGATTTCT+TGG | + | chr6_3:99861794-99861813 | None:intergenic | 40.0% |
! | TTCGCCCGTGAAATTTTGTA+TGG | - | chr6_3:99861857-99861876 | Msa0968630:intron | 40.0% |
AACCTCATTGGAATGTGCAT+GGG | + | chr6_3:99861936-99861955 | None:intergenic | 40.0% | |
! | AAGTCTTATCCCACTAAGTG+GGG | + | chr6_3:99862037-99862056 | None:intergenic | 40.0% |
! | CAAGTCTTATCCCACTAAGT+GGG | + | chr6_3:99862038-99862057 | None:intergenic | 40.0% |
AATTAGGAGACAGGACAACA+AGG | + | chr6_3:99862080-99862099 | None:intergenic | 40.0% | |
GGTGGAGAAGAAAGAAGATG+AGG | + | chr6_3:99853316-99853335 | None:intergenic | 45.0% | |
AGAGAGAGAGAGAGAGAGTA+CGG | + | chr6_3:99853455-99853474 | None:intergenic | 45.0% | |
!! | ATCGGTGTCAGTGTTGTATC+CGG | + | chr6_3:99853597-99853616 | None:intergenic | 45.0% |
TAACCGTTCAACGTGGAATG+CGG | - | chr6_3:99853782-99853801 | Msa0968630:CDS | 45.0% | |
!! | GATGTGAATGGTGGTGGATT+AGG | - | chr6_3:99853807-99853826 | Msa0968630:CDS | 45.0% |
! | TGTAGACTTGCTTGTAGCTG+TGG | - | chr6_3:99853843-99853862 | Msa0968630:intron | 45.0% |
GCGGAATGCAAGAAGTTAAG+TGG | - | chr6_3:99854037-99854056 | Msa0968630:intron | 45.0% | |
GAAGTACGGTACTACGAACT+TGG | - | chr6_3:99854230-99854249 | Msa0968630:intron | 45.0% | |
AGCACCTATGGCAGAAAAGA+TGG | - | chr6_3:99854334-99854353 | Msa0968630:intron | 45.0% | |
TGGTAGAAAACAGGCTTAGG+TGG | - | chr6_3:99854354-99854373 | Msa0968630:intron | 45.0% | |
GAAAACAGGCTTAGGTGGTT+TGG | - | chr6_3:99854359-99854378 | Msa0968630:intron | 45.0% | |
GTAGTAAGGAGAGGATACTC+AGG | - | chr6_3:99854410-99854429 | Msa0968630:intron | 45.0% | |
! | GTTGAAAACCCGCAGACTTT+TGG | - | chr6_3:99854840-99854859 | Msa0968630:CDS | 45.0% |
CACAAAATCAGCAAGTGGCT+TGG | - | chr6_3:99854991-99855010 | Msa0968630:intron | 45.0% | |
! | AAAATCAGCAAGTGGCTTGG+TGG | - | chr6_3:99854994-99855013 | Msa0968630:intron | 45.0% |
CAGAACCCTAAAAAAAGGGC+GGG | - | chr6_3:99855089-99855108 | Msa0968630:intron | 45.0% | |
!!! | CCTAATCCCGCCCTTTTTTT+AGG | + | chr6_3:99855098-99855117 | None:intergenic | 45.0% |
CCTAAAAAAAGGGCGGGATT+AGG | - | chr6_3:99855095-99855114 | Msa0968630:intron | 45.0% | |
TCATGTGACTGAAAGGTCAC+AGG | - | chr6_3:99855588-99855607 | Msa0968630:CDS | 45.0% | |
! | TTACACAAGAGGCTGTTTCC+AGG | + | chr6_3:99855621-99855640 | None:intergenic | 45.0% |
GCGTACAATACACCAAATGG+TGG | - | chr6_3:99855656-99855675 | Msa0968630:CDS | 45.0% | |
! | CATTGGCTGCAATGTAACTG+TGG | - | chr6_3:99855902-99855921 | Msa0968630:CDS | 45.0% |
! | TTGTGGTTTGTGGCTGAATG+AGG | - | chr6_3:99856017-99856036 | Msa0968630:intron | 45.0% |
GTTTGTGGCTGAATGAGGAA+TGG | - | chr6_3:99856022-99856041 | Msa0968630:intron | 45.0% | |
GCAGGTTTATAGGCAGTTTC+AGG | - | chr6_3:99856640-99856659 | Msa0968630:intron | 45.0% | |
AAGTAGGGATGTCCATGAGA+TGG | + | chr6_3:99856729-99856748 | None:intergenic | 45.0% | |
ACTACATAGGCCGTATCTCT+AGG | - | chr6_3:99856891-99856910 | Msa0968630:intron | 45.0% | |
! | GCCGTATCTCTAGGAAATGT+GGG | - | chr6_3:99856900-99856919 | Msa0968630:intron | 45.0% |
TTCACCGTGTTAGGTGTGAA+GGG | + | chr6_3:99856937-99856956 | None:intergenic | 45.0% | |
TCTTACACCTTCACCGTGTT+AGG | + | chr6_3:99856946-99856965 | None:intergenic | 45.0% | |
! | TAACACGGTGAAGGTGTAAG+AGG | - | chr6_3:99856945-99856964 | Msa0968630:intron | 45.0% |
!!! | TACTTGCGGCATTTTGGGTT+GGG | + | chr6_3:99856981-99857000 | None:intergenic | 45.0% |
TTGGAAATTCCGCCTACTTG+CGG | + | chr6_3:99856995-99857014 | None:intergenic | 45.0% | |
!! | AGCCTGAAGTGTTGACAATG+CGG | - | chr6_3:99857040-99857059 | Msa0968630:CDS | 45.0% |
CCCAACAACAGATCTACGAT+AGG | - | chr6_3:99857068-99857087 | Msa0968630:CDS | 45.0% | |
GCCTATCGTAGATCTGTTGT+TGG | + | chr6_3:99857072-99857091 | None:intergenic | 45.0% | |
!! | AAATCGGCTTGTAAGGTGAG+CGG | - | chr6_3:99857139-99857158 | Msa0968630:intron | 45.0% |
! | AGTTTGTTTCTCCGGGGAAA+TGG | + | chr6_3:99857459-99857478 | None:intergenic | 45.0% |
ACAACATCCTAGCTCAGATC+AGG | - | chr6_3:99857506-99857525 | Msa0968630:intron | 45.0% | |
TCCTCAAATGGGTGATAGGA+TGG | + | chr6_3:99857555-99857574 | None:intergenic | 45.0% | |
! | GAGGCAGCTATTTCCTCAAA+TGG | + | chr6_3:99857567-99857586 | None:intergenic | 45.0% |
CTCACTAATCTCCAATGTGG+AGG | + | chr6_3:99857586-99857605 | None:intergenic | 45.0% | |
CTCCACATTGGAGATTAGTG+AGG | - | chr6_3:99857584-99857603 | Msa0968630:intron | 45.0% | |
TAGGATTACCTGCCTCCAAA+AGG | - | chr6_3:99857914-99857933 | Msa0968630:intron | 45.0% | |
CAAAACAGGCTGCACTAGAA+AGG | + | chr6_3:99858105-99858124 | None:intergenic | 45.0% | |
GGGTAAAACTTCCCAAGAAC+AGG | + | chr6_3:99858643-99858662 | None:intergenic | 45.0% | |
! | ACAACAAGCCCAAAAGTGTG+AGG | + | chr6_3:99859061-99859080 | None:intergenic | 45.0% |
!! | ATCTCTGAGATGGACTTGTC+AGG | - | chr6_3:99859309-99859328 | Msa0968630:intron | 45.0% |
TTATCGTTTGCAGGAATGGC+TGG | - | chr6_3:99859548-99859567 | Msa0968630:intron | 45.0% | |
! | ATGATGAAGCACTTGCAGAC+TGG | - | chr6_3:99859607-99859626 | Msa0968630:intron | 45.0% |
! | TGATGAAGCACTTGCAGACT+GGG | - | chr6_3:99859608-99859627 | Msa0968630:intron | 45.0% |
ACTTGCAGACTGGGCAAAAT+TGG | - | chr6_3:99859617-99859636 | Msa0968630:intron | 45.0% | |
! | ACGCAGGTCTTATAACTCCT+TGG | + | chr6_3:99859876-99859895 | None:intergenic | 45.0% |
! | TTCGGCAGTACTGGATTGAT+TGG | + | chr6_3:99859938-99859957 | None:intergenic | 45.0% |
TGTGTTTAGAGACAAGTGCC+AGG | - | chr6_3:99860184-99860203 | Msa0968630:intron | 45.0% | |
TGATCAACCTTAGGAGTTCC+TGG | + | chr6_3:99860205-99860224 | None:intergenic | 45.0% | |
ATATGAGGTATGACCTACCC+AGG | - | chr6_3:99860520-99860539 | Msa0968630:intron | 45.0% | |
TATGAGGTATGACCTACCCA+GGG | - | chr6_3:99860521-99860540 | Msa0968630:intron | 45.0% | |
CTCAACCTGATGCTATTGCA+AGG | - | chr6_3:99860680-99860699 | Msa0968630:intron | 45.0% | |
GATGACCTTGCAATAGCATC+AGG | + | chr6_3:99860688-99860707 | None:intergenic | 45.0% | |
AAGCCCTTAAGTCTCTCTGT+TGG | - | chr6_3:99860761-99860780 | Msa0968630:intron | 45.0% | |
GTCTCTCTGTTGGATATGCA+AGG | - | chr6_3:99860771-99860790 | Msa0968630:intron | 45.0% | |
!! | ATGCAAGGGTATTCAAGTGG+AGG | - | chr6_3:99860786-99860805 | Msa0968630:intron | 45.0% |
CGCGCAAAACCATTTAACTG+TGG | + | chr6_3:99860891-99860910 | None:intergenic | 45.0% | |
!! | CAGTTAAATGGTTTTGCGCG+CGG | - | chr6_3:99860891-99860910 | Msa0968630:intron | 45.0% |
ATCATACTTGCAGGCTACGT+CGG | - | chr6_3:99861730-99861749 | Msa0968630:intron | 45.0% | |
TTGTGTACAGAAGTGAAGGC+AGG | - | chr6_3:99861902-99861921 | Msa0968630:intron | 45.0% | |
TGTGTACAGAAGTGAAGGCA+GGG | - | chr6_3:99861903-99861922 | Msa0968630:intron | 45.0% | |
CAACCTCATTGGAATGTGCA+TGG | + | chr6_3:99861937-99861956 | None:intergenic | 45.0% | |
GGACAACAAGGAAGTAACAG+AGG | + | chr6_3:99862006-99862025 | None:intergenic | 45.0% | |
! | CCAAGTCTTATCCCACTAAG+TGG | + | chr6_3:99862039-99862058 | None:intergenic | 45.0% |
CCACTTAGTGGGATAAGACT+TGG | - | chr6_3:99862036-99862055 | Msa0968630:intron | 45.0% | |
! | GTGGGATAAGACTTGGTTGT+TGG | - | chr6_3:99862043-99862062 | Msa0968630:intron | 45.0% |
ATTTAGACCCGTGCAATGCA+TGG | - | chr6_3:99862226-99862245 | Msa0968630:five_prime_UTR | 45.0% | |
TTTAGACCCGTGCAATGCAT+GGG | - | chr6_3:99862227-99862246 | Msa0968630:five_prime_UTR | 45.0% | |
CATGGGTGTAGGAGATGTAA+AGG | - | chr6_3:99862244-99862263 | Msa0968630:five_prime_UTR | 45.0% | |
!!! | GTTATTTTTTTTATAATTTT+GGG | - | chr6_3:99855970-99855989 | Msa0968630:CDS | 5.0% |
!!! | TTATTTTTTTTATAATTTTG+GGG | - | chr6_3:99855971-99855990 | Msa0968630:CDS | 5.0% |
ATTGGAAAAGCGAGTGGAGG+AGG | + | chr6_3:99853430-99853449 | None:intergenic | 50.0% | |
GAGATTGGAAAAGCGAGTGG+AGG | + | chr6_3:99853433-99853452 | None:intergenic | 50.0% | |
ACGGAGATTGGAAAAGCGAG+TGG | + | chr6_3:99853436-99853455 | None:intergenic | 50.0% | |
! | GAGAGAGAGAGTACGGAGAT+TGG | + | chr6_3:99853448-99853467 | None:intergenic | 50.0% |
TGGAATGCGGAGGATGTGAA+TGG | - | chr6_3:99853795-99853814 | Msa0968630:CDS | 50.0% | |
AATGCGGAGGATGTGAATGG+TGG | - | chr6_3:99853798-99853817 | Msa0968630:CDS | 50.0% | |
! | AGACTTGCTTGTAGCTGTGG+TGG | - | chr6_3:99853846-99853865 | Msa0968630:intron | 50.0% |
CGGTACTACGAACTTGGTTC+CGG | - | chr6_3:99854236-99854255 | Msa0968630:intron | 50.0% | |
GAGTGTTAGGGTAGCACCTA+TGG | - | chr6_3:99854322-99854341 | Msa0968630:CDS | 50.0% | |
GAGGATACTCAGGTCACTAG+AGG | - | chr6_3:99854420-99854439 | Msa0968630:intron | 50.0% | |
AAACAAACCCGTGCATCGCA+CGG | + | chr6_3:99854503-99854522 | None:intergenic | 50.0% | |
GATTCGAACCCATGCCATGT+TGG | + | chr6_3:99855039-99855058 | None:intergenic | 50.0% | |
ATGGCATGGGTTCGAATCTC+TGG | - | chr6_3:99855041-99855060 | Msa0968630:intron | 50.0% | |
CATGGGTTCGAATCTCTGGA+GGG | - | chr6_3:99855045-99855064 | Msa0968630:intron | 50.0% | |
GGCGGGATTAGGGTTAATCA+GGG | - | chr6_3:99855106-99855125 | Msa0968630:intron | 50.0% | |
GTACTTGTGAGGGGTAACCT+TGG | - | chr6_3:99855545-99855564 | Msa0968630:CDS | 50.0% | |
CAACTTTACCAGTTGCGCCA+AGG | + | chr6_3:99855565-99855584 | None:intergenic | 50.0% | |
AAGGTCACAGGTTCAAGTCC+TGG | - | chr6_3:99855600-99855619 | Msa0968630:CDS | 50.0% | |
! | GGCCGTATCTCTAGGAAATG+TGG | - | chr6_3:99856899-99856918 | Msa0968630:intron | 50.0% |
TGACCCCTTCACACCTAACA+CGG | - | chr6_3:99856930-99856949 | Msa0968630:intron | 50.0% | |
TCACCGTGTTAGGTGTGAAG+GGG | + | chr6_3:99856936-99856955 | None:intergenic | 50.0% | |
CTTCACCGTGTTAGGTGTGA+AGG | + | chr6_3:99856938-99856957 | None:intergenic | 50.0% | |
CTTCACACCTAACACGGTGA+AGG | - | chr6_3:99856936-99856955 | Msa0968630:intron | 50.0% | |
!! | CTACTTGCGGCATTTTGGGT+TGG | + | chr6_3:99856982-99857001 | None:intergenic | 50.0% |
CAACCCAAAATGCCGCAAGT+AGG | - | chr6_3:99856980-99856999 | Msa0968630:intron | 50.0% | |
!! | GCCTGAAGTGTTGACAATGC+GGG | - | chr6_3:99857041-99857060 | Msa0968630:CDS | 50.0% |
!! | CCTGAAGTGTTGACAATGCG+GGG | - | chr6_3:99857042-99857061 | Msa0968630:CDS | 50.0% |
GCCATCCTATCACCCATTTG+AGG | - | chr6_3:99857551-99857570 | Msa0968630:intron | 50.0% | |
GGAAATAGCTGCCTCCACAT+TGG | - | chr6_3:99857572-99857591 | Msa0968630:intron | 50.0% | |
AGGGTCACCGAATCTAGGTA+TGG | + | chr6_3:99858913-99858932 | None:intergenic | 50.0% | |
AGAACAGGGTCACCGAATCT+AGG | + | chr6_3:99858918-99858937 | None:intergenic | 50.0% | |
TGACGATGAGCTTGACGATG+AGG | - | chr6_3:99859584-99859603 | Msa0968630:intron | 50.0% | |
GGCTGCTCCATCCAATCAAT+TGG | + | chr6_3:99859835-99859854 | None:intergenic | 50.0% | |
TGGAAGACTACACAAGCTGG+AGG | + | chr6_3:99859856-99859875 | None:intergenic | 50.0% | |
CCTTGGAAGACTACACAAGC+TGG | + | chr6_3:99859859-99859878 | None:intergenic | 50.0% | |
CCAGCTTGTGTAGTCTTCCA+AGG | - | chr6_3:99859856-99859875 | Msa0968630:intron | 50.0% | |
ACAAGTGCCAGGAACTCCTA+AGG | - | chr6_3:99860195-99860214 | Msa0968630:intron | 50.0% | |
ATCAACACTGAACCCTGGGT+AGG | + | chr6_3:99860536-99860555 | None:intergenic | 50.0% | |
!! | CGCGCGGCTTTAGTGTATTT+TGG | - | chr6_3:99860907-99860926 | Msa0968630:intron | 50.0% |
! | GGAGGCACAACTTATCTGTG+TGG | - | chr6_3:99861243-99861262 | Msa0968630:intron | 50.0% |
CTTATCTGTGTGGACTCGCT+CGG | - | chr6_3:99861253-99861272 | Msa0968630:intron | 50.0% | |
TTATCTGTGTGGACTCGCTC+GGG | - | chr6_3:99861254-99861273 | Msa0968630:intron | 50.0% | |
GTCCCATGCACATTCCAATG+AGG | - | chr6_3:99861931-99861950 | Msa0968630:intron | 50.0% | |
CTTATCCCACTAAGTGGGGT+CGG | + | chr6_3:99862033-99862052 | None:intergenic | 50.0% | |
TCCTACACCCATGCATTGCA+CGG | + | chr6_3:99862237-99862256 | None:intergenic | 50.0% | |
CCTCCGCATTCCACGTTGAA+CGG | + | chr6_3:99853788-99853807 | None:intergenic | 55.0% | |
ACTCAGGTCACTAGAGGCAG+AGG | - | chr6_3:99854426-99854445 | Msa0968630:intron | 55.0% | |
AACAAACCCGTGCATCGCAC+GGG | + | chr6_3:99854502-99854521 | None:intergenic | 55.0% | |
GCATGGGTTCGAATCTCTGG+AGG | - | chr6_3:99855044-99855063 | Msa0968630:intron | 55.0% | |
GGGCGGGATTAGGGTTAATC+AGG | - | chr6_3:99855105-99855124 | Msa0968630:intron | 55.0% | |
CTACAGCTCCCGCATATGCA+GGG | + | chr6_3:99855696-99855715 | None:intergenic | 55.0% | |
ACTACAGCTCCCGCATATGC+AGG | + | chr6_3:99855697-99855716 | None:intergenic | 55.0% | |
GCAGCACTCACCTTACAAGC+TGG | + | chr6_3:99856857-99856876 | None:intergenic | 55.0% | |
! | CCGCCTACTTGCGGCATTTT+GGG | + | chr6_3:99856986-99857005 | None:intergenic | 55.0% |
CCCAAAATGCCGCAAGTAGG+CGG | - | chr6_3:99856983-99857002 | Msa0968630:intron | 55.0% | |
! | TCCGCCTACTTGCGGCATTT+TGG | + | chr6_3:99856987-99857006 | None:intergenic | 55.0% |
CCCCGCATTGTCAACACTTC+AGG | + | chr6_3:99857045-99857064 | None:intergenic | 55.0% | |
ACAGGCTCCTGATCTGAGCT+AGG | + | chr6_3:99857516-99857535 | None:intergenic | 55.0% | |
ACTCGCTCGGGTTTGACGTA+AGG | - | chr6_3:99861266-99861285 | Msa0968630:intron | 55.0% | |
CTCGCTCGGGTTTGACGTAA+GGG | - | chr6_3:99861267-99861286 | Msa0968630:intron | 55.0% | |
CCTACACCCATGCATTGCAC+GGG | + | chr6_3:99862236-99862255 | None:intergenic | 55.0% | |
AGGTGGAAGCGGGTGGCAAT+GGG | + | chr6_3:99853402-99853421 | None:intergenic | 60.0% | |
AGGAGGAGGAGAGGTGGAAG+CGG | + | chr6_3:99853413-99853432 | None:intergenic | 60.0% | |
GGAAAAGCGAGTGGAGGAGG+AGG | + | chr6_3:99853427-99853446 | None:intergenic | 60.0% | |
CCGTTCAACGTGGAATGCGG+AGG | - | chr6_3:99853785-99853804 | Msa0968630:CDS | 60.0% | |
GCGGAGGATGTGAATGGTGG+TGG | - | chr6_3:99853801-99853820 | Msa0968630:CDS | 60.0% | |
ACCCTAACCCGTGCGATGCA+CGG | - | chr6_3:99854492-99854511 | Msa0968630:intron | 60.0% | |
AGGGGTAACCTTGGCGCAAC+TGG | - | chr6_3:99855554-99855573 | Msa0968630:CDS | 60.0% | |
! | CAAATGGTGGGACCCCTTCC+CGG | - | chr6_3:99855669-99855688 | Msa0968630:CDS | 60.0% |
CATATGCAGGGTCCGGGAAG+GGG | + | chr6_3:99855684-99855703 | None:intergenic | 60.0% | |
GCATATGCAGGGTCCGGGAA+GGG | + | chr6_3:99855685-99855704 | None:intergenic | 60.0% | |
CTTCCCGGACCCTGCATATG+CGG | - | chr6_3:99855684-99855703 | Msa0968630:CDS | 60.0% | |
TTCCCGGACCCTGCATATGC+GGG | - | chr6_3:99855685-99855704 | Msa0968630:CDS | 60.0% | |
ATGCGGGAGCTGTAGTGCAC+CGG | - | chr6_3:99855701-99855720 | Msa0968630:CDS | 60.0% | |
CTCATTACCCGAGCGTGAGC+GGG | + | chr6_3:99857022-99857041 | None:intergenic | 60.0% | |
GCTCATTACCCGAGCGTGAG+CGG | + | chr6_3:99857023-99857042 | None:intergenic | 60.0% | |
ACCCGAGCACTCCATTTCCC+CGG | - | chr6_3:99857445-99857464 | Msa0968630:intron | 60.0% | |
! | TCCGGGGAAATGGAGTGCTC+GGG | + | chr6_3:99857449-99857468 | None:intergenic | 60.0% |
! | CTCCGGGGAAATGGAGTGCT+CGG | + | chr6_3:99857450-99857469 | None:intergenic | 60.0% |
! | CTGTGCCGACCCCACTTAGT+GGG | - | chr6_3:99862025-99862044 | Msa0968630:intron | 60.0% |
CCCGTGCAATGCATGGGTGT+AGG | - | chr6_3:99862233-99862252 | Msa0968630:five_prime_UTR | 60.0% | |
TGGAAGCGGGTGGCAATGGG+AGG | + | chr6_3:99853399-99853418 | None:intergenic | 65.0% | |
GAGGTGGAAGCGGGTGGCAA+TGG | + | chr6_3:99853403-99853422 | None:intergenic | 65.0% | |
GGAGGAGGAGAGGTGGAAGC+GGG | + | chr6_3:99853412-99853431 | None:intergenic | 65.0% | |
GAGTGGAGGAGGAGGAGAGG+TGG | + | chr6_3:99853419-99853438 | None:intergenic | 65.0% | |
AGCGAGTGGAGGAGGAGGAG+AGG | + | chr6_3:99853422-99853441 | None:intergenic | 65.0% | |
! | CCCGTGCATCGCACGGGTTA+GGG | + | chr6_3:99854496-99854515 | None:intergenic | 65.0% |
CCCTAACCCGTGCGATGCAC+GGG | - | chr6_3:99854493-99854512 | Msa0968630:intron | 65.0% | |
ACCCGTGCATCGCACGGGTT+AGG | + | chr6_3:99854497-99854516 | None:intergenic | 65.0% | |
CGGGAAGGGGTCCCACCATT+TGG | + | chr6_3:99855671-99855690 | None:intergenic | 65.0% | |
CGCATATGCAGGGTCCGGGA+AGG | + | chr6_3:99855686-99855705 | None:intergenic | 65.0% | |
CTCCCGCATATGCAGGGTCC+GGG | + | chr6_3:99855690-99855709 | None:intergenic | 65.0% | |
GCTCCCGCATATGCAGGGTC+CGG | + | chr6_3:99855691-99855710 | None:intergenic | 65.0% | |
TGCGGGAGCTGTAGTGCACC+GGG | - | chr6_3:99855702-99855721 | Msa0968630:CDS | 65.0% | |
CCAACACACCCGCTCACGCT+CGG | - | chr6_3:99857011-99857030 | Msa0968630:CDS | 65.0% | |
CAACACACCCGCTCACGCTC+GGG | - | chr6_3:99857012-99857031 | Msa0968630:CDS | 65.0% | |
GGGGTCGGCACAGGACAACA+AGG | + | chr6_3:99862018-99862037 | None:intergenic | 65.0% | |
CCACTAAGTGGGGTCGGCAC+AGG | + | chr6_3:99862027-99862046 | None:intergenic | 65.0% | |
! | CCTGTGCCGACCCCACTTAG+TGG | - | chr6_3:99862024-99862043 | Msa0968630:intron | 65.0% |
GGAGGAGAGGTGGAAGCGGG+TGG | + | chr6_3:99853409-99853428 | None:intergenic | 70.0% | |
GTGGTGGTTTCGACGCGCCG+TGG | - | chr6_3:99853862-99853881 | Msa0968630:intron | 70.0% | |
CCGAGCGTGAGCGGGTGTGT+TGG | + | chr6_3:99857014-99857033 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_3 | gene | 99853277 | 99862312 | 99853277 | ID=Msa0968630;Name=Msa0968630 |
chr6_3 | mRNA | 99853277 | 99862312 | 99853277 | ID=Msa0968630-mRNA-1;Parent=Msa0968630;Name=Msa0968630-mRNA-1;_AED=0.06;_eAED=0.06;_QI=104|0.90|0.91|1|0.81|0.75|12|403|510 |
chr6_3 | exon | 99853277 | 99853500 | 99853277 | ID=Msa0968630-mRNA-1:exon:18744;Parent=Msa0968630-mRNA-1 |
chr6_3 | exon | 99853563 | 99853846 | 99853563 | ID=Msa0968630-mRNA-1:exon:18743;Parent=Msa0968630-mRNA-1 |
chr6_3 | exon | 99854250 | 99854345 | 99854250 | ID=Msa0968630-mRNA-1:exon:18742;Parent=Msa0968630-mRNA-1 |
chr6_3 | exon | 99854782 | 99854940 | 99854782 | ID=Msa0968630-mRNA-1:exon:18741;Parent=Msa0968630-mRNA-1 |
chr6_3 | exon | 99855437 | 99855772 | 99855437 | ID=Msa0968630-mRNA-1:exon:18740;Parent=Msa0968630-mRNA-1 |
chr6_3 | exon | 99855900 | 99856028 | 99855900 | ID=Msa0968630-mRNA-1:exon:18739;Parent=Msa0968630-mRNA-1 |
chr6_3 | exon | 99856137 | 99856313 | 99856137 | ID=Msa0968630-mRNA-1:exon:18738;Parent=Msa0968630-mRNA-1 |
chr6_3 | exon | 99856831 | 99856898 | 99856831 | ID=Msa0968630-mRNA-1:exon:18737;Parent=Msa0968630-mRNA-1 |
chr6_3 | exon | 99856994 | 99857096 | 99856994 | ID=Msa0968630-mRNA-1:exon:18736;Parent=Msa0968630-mRNA-1 |
chr6_3 | exon | 99857939 | 99858161 | 99857939 | ID=Msa0968630-mRNA-1:exon:18735;Parent=Msa0968630-mRNA-1 |
chr6_3 | exon | 99861748 | 99861811 | 99861748 | ID=Msa0968630-mRNA-1:exon:18734;Parent=Msa0968630-mRNA-1 |
chr6_3 | exon | 99862136 | 99862312 | 99862136 | ID=Msa0968630-mRNA-1:exon:18733;Parent=Msa0968630-mRNA-1 |
chr6_3 | five_prime_UTR | 99862209 | 99862312 | 99862209 | ID=Msa0968630-mRNA-1:five_prime_utr;Parent=Msa0968630-mRNA-1 |
chr6_3 | CDS | 99862136 | 99862208 | 99862136 | ID=Msa0968630-mRNA-1:cds;Parent=Msa0968630-mRNA-1 |
chr6_3 | CDS | 99861748 | 99861811 | 99861748 | ID=Msa0968630-mRNA-1:cds;Parent=Msa0968630-mRNA-1 |
chr6_3 | CDS | 99857939 | 99858161 | 99857939 | ID=Msa0968630-mRNA-1:cds;Parent=Msa0968630-mRNA-1 |
chr6_3 | CDS | 99856994 | 99857096 | 99856994 | ID=Msa0968630-mRNA-1:cds;Parent=Msa0968630-mRNA-1 |
chr6_3 | CDS | 99856831 | 99856898 | 99856831 | ID=Msa0968630-mRNA-1:cds;Parent=Msa0968630-mRNA-1 |
chr6_3 | CDS | 99856137 | 99856313 | 99856137 | ID=Msa0968630-mRNA-1:cds;Parent=Msa0968630-mRNA-1 |
chr6_3 | CDS | 99855900 | 99856028 | 99855900 | ID=Msa0968630-mRNA-1:cds;Parent=Msa0968630-mRNA-1 |
chr6_3 | CDS | 99855437 | 99855772 | 99855437 | ID=Msa0968630-mRNA-1:cds;Parent=Msa0968630-mRNA-1 |
chr6_3 | CDS | 99854782 | 99854940 | 99854782 | ID=Msa0968630-mRNA-1:cds;Parent=Msa0968630-mRNA-1 |
chr6_3 | CDS | 99854250 | 99854345 | 99854250 | ID=Msa0968630-mRNA-1:cds;Parent=Msa0968630-mRNA-1 |
chr6_3 | CDS | 99853742 | 99853846 | 99853742 | ID=Msa0968630-mRNA-1:cds;Parent=Msa0968630-mRNA-1 |
chr6_3 | three_prime_UTR | 99853563 | 99853741 | 99853563 | ID=Msa0968630-mRNA-1:three_prime_utr;Parent=Msa0968630-mRNA-1 |
chr6_3 | three_prime_UTR | 99853277 | 99853500 | 99853277 | ID=Msa0968630-mRNA-1:three_prime_utr;Parent=Msa0968630-mRNA-1 |
Gene Sequence |
Protein sequence |