AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0968630


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0968630 MtrunA17_Chr6g0469941 95.420 524 10 1 1 510 1 524 0.0 1027
Msa0968630 MtrunA17_Chr5g0442211 28.412 447 245 12 66 508 65 440 4.38e-38 145
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0968630 AT5G24060.1 45.885 486 230 10 32 509 20 480 7.61e-134 397
Msa0968630 AT5G24060.3 46.855 461 213 9 57 509 27 463 2.14e-133 395
Msa0968630 AT5G24060.2 47.162 458 210 9 60 509 60 493 2.96e-133 395
Msa0968630 AT3G49140.1 43.710 469 220 8 51 503 59 499 6.95e-116 351
Msa0968630 AT3G59300.3 31.250 416 220 10 90 502 103 455 7.63e-51 180
Msa0968630 AT3G59300.1 31.250 416 220 10 90 502 97 449 8.11e-51 180
Msa0968630 AT3G59300.2 30.024 413 196 12 90 502 97 416 1.08e-43 160

Find 135 sgRNAs with CRISPR-Local

Find 590 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTGTTACTTTACTAATTT+CGG 0.236432 6_3:+99855614 None:intergenic
TGTTGCTTTGGGTGATTTCT+TGG 0.257826 6_3:+99853776 None:intergenic
TGTTGCATTTAATCAATAAT+TGG 0.259415 6_3:-99853601 Msa0968630:three_prime_UTR
AACAATCTCCAATCTGTAAA+AGG 0.275206 6_3:+99855470 None:intergenic
GAGAGAGAGAGTACGGAGAT+TGG 0.292151 6_3:+99862122 None:intergenic
GATGAGGTACACTTTCCTTT+TGG 0.294142 6_3:+99862270 None:intergenic
CCATGTTCATCTGTCAAATA+TGG 0.298949 6_3:+99856996 None:intergenic
ACTTGCAGACTGGGCAAAAT+TGG 0.313686 6_3:-99855950 Msa0968630:CDS
AACGTTTATAAAATAAAATT+AGG 0.338659 6_3:+99853474 None:intergenic
TTGTTGTAGCAAGTCATAAT+TGG 0.349044 6_3:-99856300 Msa0968630:intron
GAAAGTGTTGGTGTGATTAA+TGG 0.350795 6_3:-99855582 Msa0968630:CDS
GGAGGAGGAGAGGTGGAAGC+GGG 0.353597 6_3:+99862158 None:intergenic
AGGAGGAGGAGAGGTGGAAG+CGG 0.353661 6_3:+99862157 None:intergenic
CTTCAGATGATCCAATTGAT+TGG 0.355755 6_3:-99855746 Msa0968630:CDS
TCTTCACAAGTTTGTTTCTC+CGG 0.373500 6_3:+99858103 None:intergenic
GATGTGAATGGTGGTGGATT+AGG 0.374841 6_3:-99861760 Msa0968630:CDS
AATTTCATGATAATATTGTT+TGG 0.377075 6_3:-99857028 Msa0968630:CDS
TCTGTCAAATATGGCAAATC+TGG 0.384390 6_3:+99857005 None:intergenic
AGTTTGTTTCTCCGGGGAAA+TGG 0.385331 6_3:+99858111 None:intergenic
ATTGGAAAAGCGAGTGGAGG+AGG 0.388769 6_3:+99862140 None:intergenic
TTTACTAATTTCGGCAGTAC+TGG 0.390296 6_3:+99855623 None:intergenic
TCGTGTAGTCTTCTACTTCA+AGG 0.390376 6_3:+99854913 None:intergenic
TTCGGCAGTACTGGATTGAT+TGG 0.396859 6_3:+99855632 None:intergenic
GAGGTGGAAGCGGGTGGCAA+TGG 0.398598 6_3:+99862167 None:intergenic
GCAGATATATGCTTCTGTAT+TGG 0.404519 6_3:+99855654 None:intergenic
GGATTTGTCTACTTCGTGAT+TGG 0.406941 6_3:+99862291 Msa0968640:intron
GGCTGCTCCATCCAATCAAT+TGG 0.411923 6_3:+99855735 None:intergenic
GGAAAAGCGAGTGGAGGAGG+AGG 0.417403 6_3:+99862143 None:intergenic
GAGGCAGCTATTTCCTCAAA+TGG 0.417837 6_3:+99858003 None:intergenic
GTCCATCAGAAATTGACTTT+GGG 0.420188 6_3:-99856236 Msa0968630:CDS
AGGTGGAAGCGGGTGGCAAT+GGG 0.421436 6_3:+99862168 None:intergenic
CTCCGGGGAAATGGAGTGCT+CGG 0.429532 6_3:+99858120 None:intergenic
TGAGATTCGGATTCAAGAAA+AGG 0.431101 6_3:-99854250 Msa0968630:CDS
GGTCCATCAGAAATTGACTT+TGG 0.432825 6_3:-99856237 Msa0968630:CDS
TCACTTCTGTACACAATCAT+TGG 0.433362 6_3:+99853672 None:intergenic
TATTTCCTCAAATGGGTGAT+AGG 0.435060 6_3:+99858011 None:intergenic
CTTCACAAGTTTGTTTCTCC+GGG 0.437426 6_3:+99858104 None:intergenic
ATATCTCATTTGAAAGCTGC+TGG 0.447699 6_3:-99854849 Msa0968630:CDS
CTTATCTGTGTGGACTCGCT+CGG 0.448010 6_3:-99854314 Msa0968630:CDS
ACTCGCTCGGGTTTGACGTA+AGG 0.448186 6_3:-99854301 Msa0968630:CDS
ATAAAATAAAATTAGGAGAC+AGG 0.448843 6_3:+99853481 None:intergenic
TTATCGTTTGCAGGAATGGC+TGG 0.453489 6_3:-99856019 Msa0968630:intron
GATAATCATCATAGTTGGTT+GGG 0.460026 6_3:+99862197 None:intergenic
AGATAACGCATCACAAAAGT+TGG 0.464677 6_3:-99855532 Msa0968630:CDS
ATGATGAAGCACTTGCAGAC+TGG 0.466540 6_3:-99855960 Msa0968630:CDS
TATCCAACAGAGAGACTTAA+GGG 0.466816 6_3:+99854803 None:intergenic
AGCGAGTGGAGGAGGAGGAG+AGG 0.468033 6_3:+99862148 None:intergenic
CAAGTTCAAACACTGAGATT+CGG 0.468623 6_3:-99854263 Msa0968630:CDS
ATATCCAACAGAGAGACTTA+AGG 0.470097 6_3:+99854802 None:intergenic
CTCGCTCGGGTTTGACGTAA+GGG 0.472152 6_3:-99854300 Msa0968630:CDS
TGATGAAGCACTTGCAGACT+GGG 0.472876 6_3:-99855959 Msa0968630:CDS
TTATCTGTGTGGACTCGCTC+GGG 0.475357 6_3:-99854313 Msa0968630:CDS
TTTGACGTAAGGGTTTGTTC+AGG 0.476902 6_3:-99854290 Msa0968630:CDS
CGATAATCATCATAGTTGGT+TGG 0.486660 6_3:+99862196 None:intergenic
ATCTCTGAGATGGACTTGTC+AGG 0.489283 6_3:-99856258 Msa0968630:CDS
TTGTATGGCTTGTATGACTT+TGG 0.490843 6_3:-99853695 Msa0968630:three_prime_UTR
ACGCAGGTCTTATAACTCCT+TGG 0.498828 6_3:+99855694 None:intergenic
TCCTCAAATGGGTGATAGGA+TGG 0.503275 6_3:+99858015 None:intergenic
AGATGATCCAATTGATTGGA+TGG 0.503955 6_3:-99855742 Msa0968630:CDS
TCCTACACCCATGCATTGCA+CGG 0.504474 6_3:+99853333 None:intergenic
GCGGAGGATGTGAATGGTGG+TGG 0.505698 6_3:-99861766 Msa0968630:CDS
GATGACCTTGCAATAGCATC+AGG 0.506785 6_3:+99854882 None:intergenic
CCTCCGCATTCCACGTTGAA+CGG 0.507316 6_3:+99861782 None:intergenic
ATTTAGACCCGTGCAATGCA+TGG 0.507502 6_3:-99853341 Msa0968630:three_prime_UTR
ACAACATCCTAGCTCAGATC+AGG 0.512194 6_3:-99858061 Msa0968630:CDS
TGAAAATGAAGATGAGAATG+AGG 0.513120 6_3:-99856148 Msa0968630:CDS
CCAGCTTGTGTAGTCTTCCA+AGG 0.514469 6_3:-99855711 Msa0968630:CDS
GAGTGGAGGAGGAGGAGAGG+TGG 0.516704 6_3:+99862151 None:intergenic
TGGAAGCGGGTGGCAATGGG+AGG 0.526728 6_3:+99862171 None:intergenic
GTCTCTCTGTTGGATATGCA+AGG 0.527770 6_3:-99854796 Msa0968630:CDS
GGACTGCAAAATATCTTCAC+CGG 0.530976 6_3:+99856855 None:intergenic
ACAAGCCATACAAAATTTCA+CGG 0.532141 6_3:+99853705 None:intergenic
AGGCAGCTATTTCCTCAAAT+GGG 0.535456 6_3:+99858004 None:intergenic
TAAAAGGAAGTCTCGTCTGA+AGG 0.536320 6_3:+99855486 None:intergenic
CAACCTCATTGGAATGTGCA+TGG 0.536452 6_3:+99853633 None:intergenic
CATGGGTGTAGGAGATGTAA+AGG 0.537512 6_3:-99853323 Msa0968630:three_prime_UTR
GGATCGATAATCATCATAGT+TGG 0.540767 6_3:+99862192 None:intergenic
GGAGGAGAGGTGGAAGCGGG+TGG 0.541643 6_3:+99862161 None:intergenic
ATCCCAAAGTCAATTTCTGA+TGG 0.545465 6_3:+99856234 None:intergenic
GAAAATAAAGAAGAAAGTGT+TGG 0.549548 6_3:-99855594 Msa0968630:CDS
TCCGGGGAAATGGAGTGCTC+GGG 0.549685 6_3:+99858121 None:intergenic
GAGATTCGGATTCAAGAAAA+GGG 0.555218 6_3:-99854249 Msa0968630:intron
ACAGGCTCCTGATCTGAGCT+AGG 0.557261 6_3:+99858054 None:intergenic
GGTGGAGAAGAAAGAAGATG+AGG 0.557609 6_3:+99862254 None:intergenic
GCCATCCTATCACCCATTTG+AGG 0.558341 6_3:-99858016 Msa0968630:CDS
CATAATTGGTGTGGATACCA+TGG 0.560333 6_3:-99856286 Msa0968630:CDS
TTGTGTACAGAAGTGAAGGC+AGG 0.560544 6_3:-99853665 Msa0968630:three_prime_UTR
ACGAAGTAGACAAATCCAAA+AGG 0.563854 6_3:-99862285 Msa0968630:five_prime_UTR
AAGTTGGAAAATAATGAGAA+TGG 0.564533 6_3:-99855516 Msa0968630:CDS
AGAAATTGACTTTGGGATCG+AGG 0.565424 6_3:-99856229 Msa0968630:CDS
CCTTGGAAGACTACACAAGC+TGG 0.567061 6_3:+99855711 None:intergenic
ATCATACTTGCAGGCTACGT+CGG 0.568148 6_3:-99853837 Msa0968630:intron
CATCTCAGAGATCATTTCCA+TGG 0.568661 6_3:+99856269 None:intergenic
ACCCGAGCACTCCATTTCCC+CGG 0.572551 6_3:-99858122 Msa0968630:CDS
CATGGAAATGATCTCTGAGA+TGG 0.575487 6_3:-99856268 Msa0968630:CDS
GGTTAACAGCAAAGCAACAA+TGG 0.576380 6_3:-99857075 Msa0968630:CDS
AAAAGGAAGTCTCGTCTGAA+GGG 0.577512 6_3:+99855487 None:intergenic
AACCTCATTGGAATGTGCAT+GGG 0.578014 6_3:+99853634 None:intergenic
CCATATTTGACAGATGAACA+TGG 0.584747 6_3:-99856996 Msa0968630:CDS
TTTAGACCCGTGCAATGCAT+GGG 0.585032 6_3:-99853340 Msa0968630:three_prime_UTR
GGAAATAGCTGCCTCCACAT+TGG 0.585698 6_3:-99857995 Msa0968630:CDS
ATGATTGTGTACAGAAGTGA+AGG 0.588464 6_3:-99853669 Msa0968630:three_prime_UTR
TATATCATTGAGTTGTCTCT+CGG 0.590503 6_3:+99853805 None:intergenic
AAGCCCTTAAGTCTCTCTGT+TGG 0.591338 6_3:-99854806 Msa0968630:CDS
CCGTTCAACGTGGAATGCGG+AGG 0.602834 6_3:-99861782 Msa0968630:CDS
TCTCTCTGTTGGATATGCAA+GGG 0.606977 6_3:-99854795 Msa0968630:CDS
GACTGCAAAATATCTTCACC+GGG 0.607488 6_3:+99856856 None:intergenic
TTAAGAGAGATGCATAGTGG+TGG 0.610697 6_3:+99862236 None:intergenic
TAACCGTTCAACGTGGAATG+CGG 0.613140 6_3:-99861785 Msa0968630:CDS
TTGTTAAGAGAGATGCATAG+TGG 0.616485 6_3:+99862233 None:intergenic
CAAGCCATACAAAATTTCAC+GGG 0.617286 6_3:+99853706 None:intergenic
TGTGTACAGAAGTGAAGGCA+GGG 0.619745 6_3:-99853664 Msa0968630:three_prime_UTR
CCCGTGCAATGCATGGGTGT+AGG 0.623205 6_3:-99853334 Msa0968630:three_prime_UTR
TGGAATGCGGAGGATGTGAA+TGG 0.625238 6_3:-99861772 Msa0968630:CDS
AATGCGGAGGATGTGAATGG+TGG 0.626319 6_3:-99861769 Msa0968630:CDS
CTCAACCTGATGCTATTGCA+AGG 0.627135 6_3:-99854887 Msa0968630:CDS
CCTACACCCATGCATTGCAC+GGG 0.627991 6_3:+99853334 None:intergenic
ACGGAGATTGGAAAAGCGAG+TGG 0.630678 6_3:+99862134 None:intergenic
GATATGCAAGGGTATTCAAG+TGG 0.638092 6_3:-99854784 Msa0968630:CDS
CTCACTAATCTCCAATGTGG+AGG 0.643018 6_3:+99857984 None:intergenic
ATGCAAGGGTATTCAAGTGG+AGG 0.645083 6_3:-99854781 Msa0968630:intron
GAGATTGGAAAAGCGAGTGG+AGG 0.645581 6_3:+99862137 None:intergenic
ATCCTCACTAATCTCCAATG+TGG 0.656177 6_3:+99857981 None:intergenic
GGGGTCGGCACAGGACAACA+AGG 0.658140 6_3:+99853552 None:intergenic
AACAAGTAGAACTGTTATCG+AGG 0.659990 6_3:-99857938 Msa0968630:intron
TGAGAATGAGGATTATGACT+CGG 0.665245 6_3:-99856136 Msa0968630:intron
TGACGATGAGCTTGACGATG+AGG 0.666584 6_3:-99855983 Msa0968630:CDS
CTCCACATTGGAGATTAGTG+AGG 0.667251 6_3:-99857983 Msa0968630:CDS
CAGATAATAACCGTTCAACG+TGG 0.673542 6_3:-99861792 Msa0968630:CDS
GGACAACAAGGAAGTAACAG+AGG 0.674207 6_3:+99853564 None:intergenic
GTCCCATGCACATTCCAATG+AGG 0.679481 6_3:-99853636 Msa0968630:three_prime_UTR
TTCACAAGTTTGTTTCTCCG+GGG 0.684542 6_3:+99858105 None:intergenic
GTAGCAAGTCATAATTGGTG+TGG 0.693744 6_3:-99856295 Msa0968630:intron
GGAGGCACAACTTATCTGTG+TGG 0.695572 6_3:-99854324 Msa0968630:CDS
TGGAAGACTACACAAGCTGG+AGG 0.707383 6_3:+99855714 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAGAAAAGAAATTAAT+TGG - chr6_3:99854913-99854932 Msa0968630:CDS 10.0%
!!! CATAATTTTAAAAAAACATT+AGG + chr6_3:99855519-99855538 None:intergenic 10.0%
!!! GGTTATTTTTTTTATAATTT+TGG - chr6_3:99855969-99855988 Msa0968630:CDS 10.0%
!! AAAAAAGAAAAAAAAGAAAA+AGG - chr6_3:99856612-99856631 Msa0968630:intron 10.0%
!!! ATGGATATATTTAATTTAAA+AGG - chr6_3:99860314-99860333 Msa0968630:intron 10.0%
!!! TGGATATATTTAATTTAAAA+GGG - chr6_3:99860315-99860334 Msa0968630:intron 10.0%
!!! CGATTTTATATAAAATATAT+AGG + chr6_3:99861380-99861399 None:intergenic 10.0%
!! AACGTTTATAAAATAAAATT+AGG + chr6_3:99862096-99862115 None:intergenic 10.0%
!!! TCATTTTCTCAAATTATTAT+CGG + chr6_3:99853615-99853634 None:intergenic 15.0%
!! TTAAATGTAATTACATTTGT+CGG - chr6_3:99853640-99853659 Msa0968630:three_prime_UTR 15.0%
!!! AATTAATTGGTTTTTTGAAA+AGG - chr6_3:99854926-99854945 Msa0968630:intron 15.0%
!!! ATTAATTGGTTTTTTGAAAA+GGG - chr6_3:99854927-99854946 Msa0968630:intron 15.0%
!! TTAAGATTAAGATTAAGATT+TGG - chr6_3:99855161-99855180 Msa0968630:intron 15.0%
!! TTGTAAAAAGTTAAAAATTG+GGG + chr6_3:99855404-99855423 None:intergenic 15.0%
!! GTTGTAAAAAGTTAAAAATT+GGG + chr6_3:99855405-99855424 None:intergenic 15.0%
!! AGTTGTAAAAAGTTAAAAAT+TGG + chr6_3:99855406-99855425 None:intergenic 15.0%
!!! TTTTAAAAAAACATTAGGTA+CGG + chr6_3:99855514-99855533 None:intergenic 15.0%
!! ATAATTTGATATAATTATGC+AGG - chr6_3:99857406-99857425 Msa0968630:intron 15.0%
!!! TTAAAAATGTTAATACCTTT+TGG + chr6_3:99857932-99857951 None:intergenic 15.0%
!!! GGTATTAACATTTTTAAATA+AGG - chr6_3:99857935-99857954 Msa0968630:intron 15.0%
!!! AAAAATGCATAAATTTTGTT+TGG - chr6_3:99858206-99858225 Msa0968630:intron 15.0%
!! AATTTCATGATAATATTGTT+TGG - chr6_3:99858539-99858558 Msa0968630:intron 15.0%
!!! AAAATTATTTTCTGAAGTTA+GGG + chr6_3:99858736-99858755 None:intergenic 15.0%
!!! TTGTTTTTAATGTAATTATG+AGG - chr6_3:99859467-99859486 Msa0968630:intron 15.0%
!! TTGTTCATATTTATTGATAT+TGG - chr6_3:99860232-99860251 Msa0968630:intron 15.0%
!!! GGATATATTTAATTTAAAAG+GGG - chr6_3:99860316-99860335 Msa0968630:intron 15.0%
!! AAGAAAAAAAAAACTATAAC+AGG - chr6_3:99860356-99860375 Msa0968630:intron 15.0%
!!! TATTTATTCTAAGAAATATG+AGG - chr6_3:99860505-99860524 Msa0968630:intron 15.0%
!! AATAAATTTGTAGTTAAAAG+AGG - chr6_3:99861511-99861530 Msa0968630:intron 15.0%
!! ATAAATTTGTAGTTAAAAGA+GGG - chr6_3:99861512-99861531 Msa0968630:intron 15.0%
!!! TTTACAAAACTTCATAATTT+TGG - chr6_3:99861567-99861586 Msa0968630:intron 15.0%
!!! TTACAAAACTTCATAATTTT+GGG - chr6_3:99861568-99861587 Msa0968630:intron 15.0%
!! CTAATAACAACAAAAATGAT+AGG + chr6_3:99853906-99853925 None:intergenic 20.0%
!!! TTGTTGTTATTAGAGTTTAA+TGG - chr6_3:99853913-99853932 Msa0968630:intron 20.0%
!!! TTTGAAATAGTTTTGTGATT+TGG - chr6_3:99854015-99854034 Msa0968630:intron 20.0%
!! TGAAGTTATGAAAATTAGTT+TGG - chr6_3:99854131-99854150 Msa0968630:intron 20.0%
!!! TATGAAAATTAGTTTGGTTA+TGG - chr6_3:99854137-99854156 Msa0968630:intron 20.0%
!!! GATTTTCATATATAAGAATC+AGG - chr6_3:99854524-99854543 Msa0968630:intron 20.0%
!! TTTAAAAAAACATTAGGTAC+GGG + chr6_3:99855513-99855532 None:intergenic 20.0%
!! AAGTACGAGATAAAAAAAAA+GGG + chr6_3:99855731-99855750 None:intergenic 20.0%
!! TAGTATCATATGATGATTTA+AGG - chr6_3:99856104-99856123 Msa0968630:intron 20.0%
!! AGTATCATATGATGATTTAA+GGG - chr6_3:99856105-99856124 Msa0968630:intron 20.0%
!! TTAACTACAAGAAAAAAATG+AGG + chr6_3:99856477-99856496 None:intergenic 20.0%
!!! TCATTTTTTTCTTGTAGTTA+AGG - chr6_3:99856476-99856495 Msa0968630:intron 20.0%
!! AAAAGTTTATCTCAACAAAT+CGG + chr6_3:99856793-99856812 None:intergenic 20.0%
!!! TTTGTTTTGAGAATTTGAAT+TGG - chr6_3:99856810-99856829 Msa0968630:intron 20.0%
!!! TTGTTTTGAGAATTTGAATT+GGG - chr6_3:99856811-99856830 Msa0968630:intron 20.0%
!!! ATCATCTTAGGTTTTTATAT+TGG - chr6_3:99857098-99857117 Msa0968630:intron 20.0%
!!! TCATCTTAGGTTTTTATATT+GGG - chr6_3:99857099-99857118 Msa0968630:intron 20.0%
!! AATAAAATTTGGCAAACATT+TGG - chr6_3:99857676-99857695 Msa0968630:intron 20.0%
!! TAAATGCTAAAACCATAATT+AGG - chr6_3:99857835-99857854 Msa0968630:intron 20.0%
!! AAATGCTAAAACCATAATTA+GGG - chr6_3:99857836-99857855 Msa0968630:intron 20.0%
!!! CAGTATTTTCTAAAATGAAA+CGG + chr6_3:99857865-99857884 None:intergenic 20.0%
!! GTAGATAATTACAGATAAAT+AGG - chr6_3:99857997-99858016 Msa0968630:CDS 20.0%
!! AGATAAATAGGAGATTAAAT+TGG - chr6_3:99858009-99858028 Msa0968630:CDS 20.0%
!! CAAAACAAAGAAAAATACAA+TGG + chr6_3:99858035-99858054 None:intergenic 20.0%
!! TGCTTGTAGAATTTAATTAA+GGG + chr6_3:99858665-99858684 None:intergenic 20.0%
!! ATGCTTGTAGAATTTAATTA+AGG + chr6_3:99858666-99858685 None:intergenic 20.0%
!!! CAAAATTATTTTCTGAAGTT+AGG + chr6_3:99858737-99858756 None:intergenic 20.0%
!!! AACTTCAGAAAATAATTTTG+TGG - chr6_3:99858737-99858756 Msa0968630:intron 20.0%
!! AGAATTAAGATTAGAACAAA+AGG + chr6_3:99859183-99859202 None:intergenic 20.0%
!!! AATTTTTTAGCAAAATCCAT+TGG + chr6_3:99859663-99859682 None:intergenic 20.0%
!!! TTCTGTTACTTTACTAATTT+CGG + chr6_3:99859956-99859975 None:intergenic 20.0%
!!! TATTTATACCTTTTCTTTGT+TGG - chr6_3:99860596-99860615 Msa0968630:intron 20.0%
!! TAATGAGAAAACTTTCTTAA+TGG + chr6_3:99860940-99860959 None:intergenic 20.0%
!!! ATTACATTAACTTGTACTTT+TGG + chr6_3:99860971-99860990 None:intergenic 20.0%
!! TAAATTTGTAGTTAAAAGAG+GGG - chr6_3:99861513-99861532 Msa0968630:intron 20.0%
!!! CTTCATTGTGTTTAAAATTT+GGG - chr6_3:99861596-99861615 Msa0968630:intron 20.0%
!! TGTTGCATTTAATCAATAAT+TGG - chr6_3:99861966-99861985 Msa0968630:intron 20.0%
!! ATAAAATAAAATTAGGAGAC+AGG + chr6_3:99862089-99862108 None:intergenic 20.0%
! AAATATAACACTCAGCAAAT+GGG + chr6_3:99853533-99853552 None:intergenic 25.0%
! TAAATATAACACTCAGCAAA+TGG + chr6_3:99853534-99853553 None:intergenic 25.0%
! ACAGTTAAATAACAATACCA+CGG + chr6_3:99853882-99853901 None:intergenic 25.0%
!! AAAACTATTTTACACTGTCA+AGG - chr6_3:99854070-99854089 Msa0968630:intron 25.0%
!!! TCCTCTATTTTGATGATTTA+GGG - chr6_3:99854107-99854126 Msa0968630:intron 25.0%
! ACTTGTAAAATGTTGAAGTA+CGG - chr6_3:99854216-99854235 Msa0968630:intron 25.0%
!! AAAAAAAGTACAACAAGTAC+CGG + chr6_3:99854258-99854277 None:intergenic 25.0%
!! GACCTATAAATTTTGTAGTA+AGG - chr6_3:99854396-99854415 Msa0968630:intron 25.0%
! CTCCTTACTACAAAATTTAT+AGG + chr6_3:99854401-99854420 None:intergenic 25.0%
!! ATAAATTTTGTAGTAAGGAG+AGG - chr6_3:99854401-99854420 Msa0968630:intron 25.0%
! TAGTTCAAAATACACATCAA+AGG - chr6_3:99854693-99854712 Msa0968630:intron 25.0%
! GTCTTGAAAAATGAAAATGT+AGG + chr6_3:99854790-99854809 None:intergenic 25.0%
! TTGAAAAGGGAGTTTAATAT+TGG - chr6_3:99854940-99854959 Msa0968630:intron 25.0%
! TAATATTGGATATCATGTAG+TGG - chr6_3:99854954-99854973 Msa0968630:intron 25.0%
!!! TTTTTCAGAACCCTAAAAAA+AGG - chr6_3:99855084-99855103 Msa0968630:intron 25.0%
!! TTTTCAGAACCCTAAAAAAA+GGG - chr6_3:99855085-99855104 Msa0968630:intron 25.0%
!! TAATGAGTTGAATCGAAATA+TGG - chr6_3:99855194-99855213 Msa0968630:intron 25.0%
! TGGTTTATGATCAAACATTA+TGG - chr6_3:99855214-99855233 Msa0968630:intron 25.0%
! CAAGTACGAGATAAAAAAAA+AGG + chr6_3:99855732-99855751 None:intergenic 25.0%
!! TCATCAACAGAATTTTTACT+CGG + chr6_3:99855812-99855831 None:intergenic 25.0%
! TTTGTTAATTCATTTCTCTC+AGG + chr6_3:99857289-99857308 None:intergenic 25.0%
! GAAATACTATATGTAATGAG+AGG - chr6_3:99857377-99857396 Msa0968630:intron 25.0%
! CACAAGGAGAAAATAAAATT+TGG - chr6_3:99857665-99857684 Msa0968630:intron 25.0%
!! CATGTAATTTTCTTACATGA+AGG - chr6_3:99857792-99857811 Msa0968630:intron 25.0%
!! TGCTTGTTTAGAATTCATTT+AGG - chr6_3:99857895-99857914 Msa0968630:intron 25.0%
!! AAAATGTTAATACCTTTTGG+AGG + chr6_3:99857929-99857948 None:intergenic 25.0%
! CTGAAAGTTTAAATAACACA+TGG + chr6_3:99858061-99858080 None:intergenic 25.0%
! CATATTCAATAAGTCAAAAC+AGG + chr6_3:99858119-99858138 None:intergenic 25.0%
! TTATTGAATATGCGTAAGTT+GGG - chr6_3:99858127-99858146 Msa0968630:CDS 25.0%
! AATGCAGATATTCTCTATTA+GGG + chr6_3:99858167-99858186 None:intergenic 25.0%
! TAATGCAGATATTCTCTATT+AGG + chr6_3:99858168-99858187 None:intergenic 25.0%
! AATAGAGAATATCTGCATTA+TGG - chr6_3:99858168-99858187 Msa0968630:intron 25.0%
! GGAAAATCAATACATAGTAT+AGG + chr6_3:99858622-99858641 None:intergenic 25.0%
! CTTGTAGAATTTAATTAAGG+GGG + chr6_3:99858663-99858682 None:intergenic 25.0%
! GCTTGTAGAATTTAATTAAG+GGG + chr6_3:99858664-99858683 None:intergenic 25.0%
!! AATAATTTTGTGGTAAGACT+AGG - chr6_3:99858747-99858766 Msa0968630:intron 25.0%
! ACTGTTTGTAAGTATTTCAT+AGG + chr6_3:99858805-99858824 None:intergenic 25.0%
! ATGCCATTAATATAAGAACA+GGG + chr6_3:99858932-99858951 None:intergenic 25.0%
! AATGCCATTAATATAAGAAC+AGG + chr6_3:99858933-99858952 None:intergenic 25.0%
! AATGAACATCAAGAAAATGA+AGG + chr6_3:99858981-99859000 None:intergenic 25.0%
! AATTATTGTTGAAGTCCAAA+AGG + chr6_3:99859032-99859051 None:intergenic 25.0%
!! ATTTAATATCCTCACACTTT+TGG - chr6_3:99859049-99859068 Msa0968630:intron 25.0%
!! TTTAATATCCTCACACTTTT+GGG - chr6_3:99859050-99859069 Msa0968630:intron 25.0%
! AAAGTTTGCATATCTTAACA+AGG - chr6_3:99859223-99859242 Msa0968630:intron 25.0%
! TTATTCATATTATCGTTTGC+AGG - chr6_3:99859539-99859558 Msa0968630:intron 25.0%
!! TTTTGCTAAAAAATTGACTG+AGG - chr6_3:99859668-99859687 Msa0968630:intron 25.0%
! TGTTAATGTAACCTAATTTG+TGG - chr6_3:99859695-99859714 Msa0968630:intron 25.0%
!! TTTTCTGTTGCACTTTTATT+CGG - chr6_3:99859743-99859762 Msa0968630:intron 25.0%
!! GAAAATAAAGAAGAAAGTGT+TGG - chr6_3:99859973-99859992 Msa0968630:intron 25.0%
! AAGTTGGAAAATAATGAGAA+TGG - chr6_3:99860051-99860070 Msa0968630:intron 25.0%
! AATTTAGTGACTGCTTTAAT+TGG - chr6_3:99860268-99860287 Msa0968630:intron 25.0%
! CATACTCAGTTAAGAAATAA+TGG - chr6_3:99860295-99860314 Msa0968630:intron 25.0%
!!! ACCTAAAATTTTGACATCAA+TGG - chr6_3:99860403-99860422 Msa0968630:intron 25.0%
!! ACCATTGATGTCAAAATTTT+AGG + chr6_3:99860407-99860426 None:intergenic 25.0%
! CTCTTAATTCATAACTCAAT+TGG - chr6_3:99860457-99860476 Msa0968630:intron 25.0%
!! TTTAGTTTCCAACAAAGAAA+AGG + chr6_3:99860607-99860626 None:intergenic 25.0%
! GAGAAACTATGACTTATTAA+AGG - chr6_3:99861061-99861080 Msa0968630:intron 25.0%
! TAGAAATGATCAAATACCAT+TGG - chr6_3:99861104-99861123 Msa0968630:intron 25.0%
! AGAAATGATCAAATACCATT+GGG - chr6_3:99861105-99861124 Msa0968630:intron 25.0%
!! CTTAAGTGTTGTAAAAAGAA+TGG + chr6_3:99861160-99861179 None:intergenic 25.0%
! ACGTAAAAATAGTGAGATTT+AGG - chr6_3:99861440-99861459 Msa0968630:intron 25.0%
! CGTAAAAATAGTGAGATTTA+GGG - chr6_3:99861441-99861460 Msa0968630:intron 25.0%
!! GCTTCATTGTGTTTAAAATT+TGG - chr6_3:99861595-99861614 Msa0968630:intron 25.0%
!! ATCTGAAATCAGATATATGA+AGG + chr6_3:99861653-99861672 None:intergenic 25.0%
! ACTTAATATATCATACTTGC+AGG - chr6_3:99861721-99861740 Msa0968630:intron 25.0%
GATAATCATCATAGTTGGTT+GGG + chr6_3:99853373-99853392 None:intergenic 30.0%
AATATAACACTCAGCAAATG+GGG + chr6_3:99853532-99853551 None:intergenic 30.0%
!! AATCAGAAGTGTCAATGTTA+TGG - chr6_3:99853675-99853694 Msa0968630:three_prime_UTR 30.0%
GATTGTTAGTTACTACTTAC+TGG - chr6_3:99853699-99853718 Msa0968630:three_prime_UTR 30.0%
!!! GAAATAGTTTTGTGATTTGG+CGG - chr6_3:99854018-99854037 Msa0968630:intron 30.0%
!!! CTCCTCTATTTTGATGATTT+AGG - chr6_3:99854106-99854125 Msa0968630:intron 30.0%
!!! CCTCTATTTTGATGATTTAG+GGG - chr6_3:99854108-99854127 Msa0968630:intron 30.0%
TGTGAATTTGTGGATACTTA+AGG - chr6_3:99854161-99854180 Msa0968630:intron 30.0%
TGGATACTTAAGGAAAGATT+AGG - chr6_3:99854171-99854190 Msa0968630:intron 30.0%
TCATTATTCTGTTGTGAGTA+AGG - chr6_3:99854281-99854300 Msa0968630:CDS 30.0%
! GTTTCTCAGATAGTTTTTCT+AGG + chr6_3:99854456-99854475 None:intergenic 30.0%
TTCAACCATATAAGCCTAAA+AGG - chr6_3:99854761-99854780 Msa0968630:intron 30.0%
!!! TTTTTCAAGACATATGTCGT+AGG - chr6_3:99854799-99854818 Msa0968630:CDS 30.0%
TAGGAAAAATGAGGAAGAAA+TGG - chr6_3:99854818-99854837 Msa0968630:CDS 30.0%
!! ATGCTTTGAAATATCCAACA+TGG - chr6_3:99855022-99855041 Msa0968630:intron 30.0%
! GTATTTGAGTTTCTTTGTTG+TGG - chr6_3:99855371-99855390 Msa0968630:intron 30.0%
TTATGTATTTCGTACTTGTG+AGG - chr6_3:99855534-99855553 Msa0968630:CDS 30.0%
TATGTATTTCGTACTTGTGA+GGG - chr6_3:99855535-99855554 Msa0968630:CDS 30.0%
GAGTAAAAATTCTGTTGATG+AGG - chr6_3:99855811-99855830 Msa0968630:intron 30.0%
!!! TGGAAAGGTTATTTTGACAT+TGG - chr6_3:99855885-99855904 Msa0968630:intron 30.0%
!!! ATAATTTTGGGGTGAAATTG+TGG - chr6_3:99855982-99856001 Msa0968630:CDS 30.0%
TACTAAGAATCACTGTAAGA+CGG + chr6_3:99856089-99856108 None:intergenic 30.0%
ATGATTTAAGGGTGAACTTA+TGG - chr6_3:99856116-99856135 Msa0968630:intron 30.0%
AGTTGCAATGTAATTGAAGT+TGG - chr6_3:99856155-99856174 Msa0968630:CDS 30.0%
TTGGGTTTGTGAAAAACTAT+TGG - chr6_3:99856242-99856261 Msa0968630:CDS 30.0%
ATTTGAGTGTGTATGGAAAA+TGG + chr6_3:99856275-99856294 None:intergenic 30.0%
ACAAATGTCAAGTGTGTTAA+TGG - chr6_3:99856339-99856358 Msa0968630:intron 30.0%
!! ATGGTTGATTTGAATTCAGA+TGG - chr6_3:99856358-99856377 Msa0968630:intron 30.0%
ATGGTAAATTGTGACTTCTT+AGG - chr6_3:99856377-99856396 Msa0968630:intron 30.0%
! GTAGTTAAGGTATTTGAGTT+CGG - chr6_3:99856489-99856508 Msa0968630:intron 30.0%
!! AATGTGTTTCTAGAAGTAGA+TGG + chr6_3:99856522-99856541 None:intergenic 30.0%
AAAAAGAAAAAGGTTTCTGC+AGG - chr6_3:99856622-99856641 Msa0968630:intron 30.0%
! ACCTTGCACTCAATTTTTAT+CGG + chr6_3:99856680-99856699 None:intergenic 30.0%
! TTAGACTGTTGAGCTTTATA+TGG - chr6_3:99856748-99856767 Msa0968630:intron 30.0%
TATGTAGTGTTATAACGCTT+GGG + chr6_3:99856879-99856898 None:intergenic 30.0%
CTAACTCATCCTTACAAAAT+CGG - chr6_3:99857123-99857142 Msa0968630:intron 30.0%
! TGATTATAGTTTGTAGAGAG+TGG + chr6_3:99857167-99857186 None:intergenic 30.0%
ACTCTCTACAAACTATAATC+AGG - chr6_3:99857166-99857185 Msa0968630:intron 30.0%
! GCCTTATCTTTTATCAATGT+GGG - chr6_3:99857188-99857207 Msa0968630:intron 30.0%
TCCCACATTGATAAAAGATA+AGG + chr6_3:99857192-99857211 None:intergenic 30.0%
AATCTTGGATGAAAGTTCTT+GGG + chr6_3:99857226-99857245 None:intergenic 30.0%
AAATCTTGGATGAAAGTTCT+TGG + chr6_3:99857227-99857246 None:intergenic 30.0%
! TTTCAAAGTAATGTCACTTC+AGG + chr6_3:99857251-99857270 None:intergenic 30.0%
! ATGCAAATTTTGTGACTTCT+TGG - chr6_3:99857308-99857327 Msa0968630:intron 30.0%
!! AGTATTTCTAGACACATGAA+AGG + chr6_3:99857365-99857384 None:intergenic 30.0%
!! AGGTACTAATTTGTTTCACA+AGG - chr6_3:99857649-99857668 Msa0968630:intron 30.0%
AATTACATGCTTTGTAGCAT+AGG + chr6_3:99857781-99857800 None:intergenic 30.0%
CTTATTGAATATGCGTAAGT+TGG - chr6_3:99858126-99858145 Msa0968630:CDS 30.0%
AATTCTGTCAAAAGAAACAG+TGG + chr6_3:99858258-99858277 None:intergenic 30.0%
ATATGAAGATGAAGGATGAA+AGG + chr6_3:99858326-99858345 None:intergenic 30.0%
CCAGATTTATATGAAGATGA+AGG + chr6_3:99858334-99858353 None:intergenic 30.0%
CCTTCATCTTCATATAAATC+TGG - chr6_3:99858331-99858350 Msa0968630:intron 30.0%
!! GATTGTGGCATATCATTTTT+AGG - chr6_3:99858471-99858490 Msa0968630:intron 30.0%
!!! TGTATTGATTTTCCTGTTCT+TGG - chr6_3:99858628-99858647 Msa0968630:intron 30.0%
!!! GTATTGATTTTCCTGTTCTT+GGG - chr6_3:99858629-99858648 Msa0968630:intron 30.0%
!! ATATATTTTCAAGCAAAGCC+CGG - chr6_3:99858693-99858712 Msa0968630:intron 30.0%
AAACTGTAAGTATGTGAGAA+TGG + chr6_3:99858837-99858856 None:intergenic 30.0%
!!! TGTCTACTTTTTAGAGTAGA+AGG + chr6_3:99858870-99858889 None:intergenic 30.0%
AAAAGTAGACATGTACTTTG+AGG - chr6_3:99858879-99858898 Msa0968630:intron 30.0%
TGACCCTGTTCTTATATTAA+TGG - chr6_3:99858926-99858945 Msa0968630:intron 30.0%
TCAATTGAGCAAACAAATCA+TGG + chr6_3:99859118-99859137 None:intergenic 30.0%
TGCATATCTTAACAAGGTTA+TGG - chr6_3:99859229-99859248 Msa0968630:intron 30.0%
!! ATTATGACTTGCTACAACAA+GGG + chr6_3:99859267-99859286 None:intergenic 30.0%
!! AATTATGACTTGCTACAACA+AGG + chr6_3:99859268-99859287 None:intergenic 30.0%
TTGTTGTAGCAAGTCATAAT+TGG - chr6_3:99859267-99859286 Msa0968630:intron 30.0%
TGAAAATGAAGATGAGAATG+AGG - chr6_3:99859419-99859438 Msa0968630:intron 30.0%
! GAATAAAAGTGCAACAGAAA+AGG + chr6_3:99859744-99859763 None:intergenic 30.0%
! TGCACTTTTATTCGGTTTAT+TGG - chr6_3:99859751-99859770 Msa0968630:intron 30.0%
! GAATTTTCTTCAATAAACGC+AGG + chr6_3:99859892-99859911 None:intergenic 30.0%
AACAATCTCCAATCTGTAAA+AGG + chr6_3:99860100-99860119 None:intergenic 30.0%
GAATAAATAAGCCAGCAAAT+AGG + chr6_3:99860494-99860513 None:intergenic 30.0%
TGCTACAAACATTCTTATTC+CGG + chr6_3:99861027-99861046 None:intergenic 30.0%
GAAATGATCAAATACCATTG+GGG - chr6_3:99861106-99861125 Msa0968630:intron 30.0%
! TGTTGATTACAATTCATTGC+AGG - chr6_3:99861222-99861241 Msa0968630:intron 30.0%
! TATATCATTGAGTTGTCTCT+CGG + chr6_3:99861765-99861784 None:intergenic 30.0%
ACAAGCCATACAAAATTTCA+CGG + chr6_3:99861865-99861884 None:intergenic 30.0%
CAAAAATTACACAACCTCAT+TGG + chr6_3:99861948-99861967 None:intergenic 30.0%
ACGAAGTAGACAAATCCAAA+AGG - chr6_3:99853282-99853301 Msa0968630:three_prime_UTR 35.0%
TTGTTAAGAGAGATGCATAG+TGG + chr6_3:99853337-99853356 None:intergenic 35.0%
CGATAATCATCATAGTTGGT+TGG + chr6_3:99853374-99853393 None:intergenic 35.0%
GGATCGATAATCATCATAGT+TGG + chr6_3:99853378-99853397 None:intergenic 35.0%
TAGTTCTTACTACGAGATAC+CGG - chr6_3:99853575-99853594 Msa0968630:three_prime_UTR 35.0%
AGTTGTATGACATAGCAGAT+TGG + chr6_3:99853992-99854011 None:intergenic 35.0%
CCCCTAAATCATCAAAATAG+AGG + chr6_3:99854111-99854130 None:intergenic 35.0%
TGGTTATGGTTGTGAATTTG+TGG - chr6_3:99854151-99854170 Msa0968630:intron 35.0%
!! ACCATATTAGAGAGAGTGTT+AGG - chr6_3:99854309-99854328 Msa0968630:CDS 35.0%
!! CCATATTAGAGAGAGTGTTA+GGG - chr6_3:99854310-99854329 Msa0968630:CDS 35.0%
CAGAAAAGATGGTAGAAAAC+AGG - chr6_3:99854345-99854364 Msa0968630:intron 35.0%
! GAAAATGTAGGTGACCTTTT+AGG + chr6_3:99854778-99854797 None:intergenic 35.0%
CATATGTCGTAGGAAAAATG+AGG - chr6_3:99854809-99854828 Msa0968630:CDS 35.0%
AATCTAAACCCAAAAGTCTG+CGG + chr6_3:99854852-99854871 None:intergenic 35.0%
GAAGGAGAAAGGAGAAAAAA+GGG - chr6_3:99854874-99854893 Msa0968630:CDS 35.0%
!! GCTGATTTTGTGATAGCATT+TGG + chr6_3:99854983-99855002 None:intergenic 35.0%
TTGAAATATCCAACATGGCA+TGG - chr6_3:99855027-99855046 Msa0968630:intron 35.0%
TGAAATATCCAACATGGCAT+GGG - chr6_3:99855028-99855047 Msa0968630:intron 35.0%
ATAATATGGGATCGTCTACA+TGG + chr6_3:99855251-99855270 None:intergenic 35.0%
ATGTAGACGATCCCATATTA+TGG - chr6_3:99855250-99855269 Msa0968630:intron 35.0%
TGTAGACGATCCCATATTAT+GGG - chr6_3:99855251-99855270 Msa0968630:intron 35.0%
CAAGTCTTTGCCCATAATAT+GGG + chr6_3:99855264-99855283 None:intergenic 35.0%
AAAAAACATTAGGTACGGGT+AGG + chr6_3:99855509-99855528 None:intergenic 35.0%
ATGTATTTCGTACTTGTGAG+GGG - chr6_3:99855536-99855555 Msa0968630:CDS 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG + chr6_3:99855632-99855651 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG - chr6_3:99855631-99855650 Msa0968630:CDS 35.0%
GATAAAAAAAAAGGGCAACC+CGG + chr6_3:99855723-99855742 None:intergenic 35.0%
ACCTTTCCAGAATCTTTACT+CGG + chr6_3:99855874-99855893 None:intergenic 35.0%
! TGTGGAAGTTAGTTAAGTTG+TGG - chr6_3:99856000-99856019 Msa0968630:CDS 35.0%
! GTTAGTTAAGTTGTGGTTTG+TGG - chr6_3:99856007-99856026 Msa0968630:CDS 35.0%
! TAGTTTTTCACAAACCCAAG+AGG + chr6_3:99856241-99856260 None:intergenic 35.0%
!! ACTGTTGATTTGAGTGTGTA+TGG + chr6_3:99856282-99856301 None:intergenic 35.0%
! GAGGTATTTCACATGACATT+TGG + chr6_3:99856458-99856477 None:intergenic 35.0%
! TTCTAGAAGTAGATGGATGA+AGG + chr6_3:99856515-99856534 None:intergenic 35.0%
AAAGGTTTCTGCAGGTTTAT+AGG - chr6_3:99856630-99856649 Msa0968630:intron 35.0%
! CCTTGCACTCAATTTTTATC+GGG + chr6_3:99856679-99856698 None:intergenic 35.0%
! AAGCTCAACAGTCTAAAGTA+GGG + chr6_3:99856744-99856763 None:intergenic 35.0%
! AAAGCTCAACAGTCTAAAGT+AGG + chr6_3:99856745-99856764 None:intergenic 35.0%
CTATGTAGTGTTATAACGCT+TGG + chr6_3:99856880-99856899 None:intergenic 35.0%
CAAGCGTTATAACACTACAT+AGG - chr6_3:99856878-99856897 Msa0968630:CDS 35.0%
! ATAGGCTCTGATATCATCTT+AGG - chr6_3:99857086-99857105 Msa0968630:intron 35.0%
! CGATTTTGTAAGGATGAGTT+AGG + chr6_3:99857125-99857144 None:intergenic 35.0%
!! GGCCTTATCTTTTATCAATG+TGG - chr6_3:99857187-99857206 Msa0968630:intron 35.0%
! TCTTTTATCAATGTGGGACT+TGG - chr6_3:99857194-99857213 Msa0968630:intron 35.0%
! ATGTCACTTCAGGAAAATCT+TGG + chr6_3:99857241-99857260 None:intergenic 35.0%
! TCTTCACAAGTTTGTTTCTC+CGG + chr6_3:99857467-99857486 None:intergenic 35.0%
!! GGCTTCTCATTTTTCTTTAC+AGG + chr6_3:99857534-99857553 None:intergenic 35.0%
TATTTCCTCAAATGGGTGAT+AGG + chr6_3:99857559-99857578 None:intergenic 35.0%
AACAAGTAGAACTGTTATCG+AGG - chr6_3:99857629-99857648 Msa0968630:intron 35.0%
!!! TCAGTGCTATTTTTGTACGA+CGG - chr6_3:99857709-99857728 Msa0968630:intron 35.0%
TGAAACGGAAACCCTAATTA+TGG + chr6_3:99857850-99857869 None:intergenic 35.0%
TGCACTAGAAAGGAAAATTC+TGG + chr6_3:99858095-99858114 None:intergenic 35.0%
TATCTGCATTATGGAAAGTC+TGG - chr6_3:99858177-99858196 Msa0968630:intron 35.0%
! CATTTTCATTGCATCAGTTG+AGG + chr6_3:99858362-99858381 None:intergenic 35.0%
! TGTATAGCTGATGATGATTG+TGG - chr6_3:99858456-99858475 Msa0968630:intron 35.0%
TCTGTCAAATATGGCAAATC+TGG + chr6_3:99858565-99858584 None:intergenic 35.0%
CCATGTTCATCTGTCAAATA+TGG + chr6_3:99858574-99858593 None:intergenic 35.0%
CCATATTTGACAGATGAACA+TGG - chr6_3:99858571-99858590 Msa0968630:intron 35.0%
ATGAACATGGAAGTAAGTGA+TGG - chr6_3:99858584-99858603 Msa0968630:intron 35.0%
TCTAACCTTGTAGATAATGC+TGG - chr6_3:99858772-99858791 Msa0968630:intron 35.0%
AAACTCACCATACCTAGATT+CGG - chr6_3:99858903-99858922 Msa0968630:intron 35.0%
!! AACTGTAATTTGCCACCTTT+TGG - chr6_3:99859014-99859033 Msa0968630:intron 35.0%
TATTGTTGAAGTCCAAAAGG+TGG + chr6_3:99859029-99859048 None:intergenic 35.0%
GAGCAAACAAATCATGGATA+AGG + chr6_3:99859112-99859131 None:intergenic 35.0%
! GTCCATCAGAAATTGACTTT+GGG - chr6_3:99859331-99859350 Msa0968630:intron 35.0%
ATCCCAAAGTCAATTTCTGA+TGG + chr6_3:99859336-99859355 None:intergenic 35.0%
TGAGAATGAGGATTATGACT+CGG - chr6_3:99859431-99859450 Msa0968630:intron 35.0%
ATGTGACATCAGTTGAGAAA+TGG + chr6_3:99859501-99859520 None:intergenic 35.0%
CATATTATCGTTTGCAGGAA+TGG - chr6_3:99859544-99859563 Msa0968630:intron 35.0%
!! GTAACCTAATTTGTGGCTTT+TGG - chr6_3:99859702-99859721 Msa0968630:intron 35.0%
CTTCAGATGATCCAATTGAT+TGG - chr6_3:99859821-99859840 Msa0968630:intron 35.0%
AGATGATCCAATTGATTGGA+TGG - chr6_3:99859825-99859844 Msa0968630:intron 35.0%
GCAGATATATGCTTCTGTAT+TGG + chr6_3:99859916-99859935 None:intergenic 35.0%
TTTACTAATTTCGGCAGTAC+TGG + chr6_3:99859947-99859966 None:intergenic 35.0%
!! GAAAGTGTTGGTGTGATTAA+TGG - chr6_3:99859985-99860004 Msa0968630:intron 35.0%
AGATAACGCATCACAAAAGT+TGG - chr6_3:99860035-99860054 Msa0968630:intron 35.0%
! ATTCAAGTGTTTTCTGCACA+CGG - chr6_3:99860123-99860142 Msa0968630:intron 35.0%
ATACAAGTCAGCTAACTTAC+GGG + chr6_3:99860153-99860172 None:intergenic 35.0%
CATACAAGTCAGCTAACTTA+CGG + chr6_3:99860154-99860173 None:intergenic 35.0%
AAAGTGCAATGATCAACCTT+AGG + chr6_3:99860214-99860233 None:intergenic 35.0%
! GAAATATCTGAAGTTGTTGC+AGG + chr6_3:99860438-99860457 None:intergenic 35.0%
TAATCAACGATCCTATTTGC+TGG - chr6_3:99860480-99860499 Msa0968630:intron 35.0%
TATTATCAACACTGAACCCT+GGG + chr6_3:99860540-99860559 None:intergenic 35.0%
ATATTATCAACACTGAACCC+TGG + chr6_3:99860541-99860560 None:intergenic 35.0%
! TTTATGTTCTGATTTTGCGC+AGG - chr6_3:99860627-99860646 Msa0968630:intron 35.0%
ATATCTCATTTGAAAGCTGC+TGG - chr6_3:99860718-99860737 Msa0968630:intron 35.0%
TATCCAACAGAGAGACTTAA+GGG + chr6_3:99860767-99860786 None:intergenic 35.0%
ATATCCAACAGAGAGACTTA+AGG + chr6_3:99860768-99860787 None:intergenic 35.0%
TCCTAGTTTCCACAGTTAAA+TGG - chr6_3:99860879-99860898 Msa0968630:intron 35.0%
ACCATTTAACTGTGGAAACT+AGG + chr6_3:99860883-99860902 None:intergenic 35.0%
CATTTCACTACTATACATGC+CGG - chr6_3:99861005-99861024 Msa0968630:intron 35.0%
AAAGAATGGAACAGATGACA+AGG + chr6_3:99861146-99861165 None:intergenic 35.0%
TACATTTGCCATGTTACAGT+TGG - chr6_3:99861192-99861211 Msa0968630:intron 35.0%
ATTGATCACCAACTGTAACA+TGG + chr6_3:99861203-99861222 None:intergenic 35.0%
TGATTACAATTCATTGCAGG+AGG - chr6_3:99861225-99861244 Msa0968630:intron 35.0%
CAAGTTCAAACACTGAGATT+CGG - chr6_3:99861304-99861323 Msa0968630:intron 35.0%
TGAGATTCGGATTCAAGAAA+AGG - chr6_3:99861317-99861336 Msa0968630:intron 35.0%
GAGATTCGGATTCAAGAAAA+GGG - chr6_3:99861318-99861337 Msa0968630:intron 35.0%
GTATTAGGATGTGTAGTACA+AGG + chr6_3:99861409-99861428 None:intergenic 35.0%
ACGTAGCTCGTATTTGTATT+AGG + chr6_3:99861424-99861443 None:intergenic 35.0%
AGCTCGTTCGAAATAAAAAG+TGG - chr6_3:99861474-99861493 Msa0968630:intron 35.0%
TATGAAGGTTGTGTTTGTCA+AGG + chr6_3:99861638-99861657 None:intergenic 35.0%
!!! GCTTCGTTTTTTGTTGCTTT+GGG + chr6_3:99861805-99861824 None:intergenic 35.0%
!!! TGCTTCGTTTTTTGTTGCTT+TGG + chr6_3:99861806-99861825 None:intergenic 35.0%
CAAGCCATACAAAATTTCAC+GGG + chr6_3:99861864-99861883 None:intergenic 35.0%
! TTGTATGGCTTGTATGACTT+TGG - chr6_3:99861872-99861891 Msa0968630:intron 35.0%
TCACTTCTGTACACAATCAT+TGG + chr6_3:99861898-99861917 None:intergenic 35.0%
ATGATTGTGTACAGAAGTGA+AGG - chr6_3:99861898-99861917 Msa0968630:intron 35.0%
! GATGAGGTACACTTTCCTTT+TGG + chr6_3:99853300-99853319 None:intergenic 40.0%
TTAAGAGAGATGCATAGTGG+TGG + chr6_3:99853334-99853353 None:intergenic 40.0%
CAGATAATAACCGTTCAACG+TGG - chr6_3:99853775-99853794 Msa0968630:CDS 40.0%
CCCTAACACTCTCTCTAATA+TGG + chr6_3:99854313-99854332 None:intergenic 40.0%
! TCTACCATCTTTTCTGCCAT+AGG + chr6_3:99854341-99854360 None:intergenic 40.0%
AGATGGTAGAAAACAGGCTT+AGG - chr6_3:99854351-99854370 Msa0968630:intron 40.0%
TGTATGACGAGTTGCAACTT+CGG + chr6_3:99854630-99854649 None:intergenic 40.0%
! GGTGACCTTTTAGGCTTATA+TGG + chr6_3:99854769-99854788 None:intergenic 40.0%
! TTGAAAACCCGCAGACTTTT+GGG - chr6_3:99854841-99854860 Msa0968630:CDS 40.0%
ATCTAAACCCAAAAGTCTGC+GGG + chr6_3:99854851-99854870 None:intergenic 40.0%
!!! CTTTTGGGTTTAGATTGCGA+AGG - chr6_3:99854856-99854875 Msa0968630:CDS 40.0%
GTTTAGATTGCGAAGGAGAA+AGG - chr6_3:99854863-99854882 Msa0968630:CDS 40.0%
CGAAGGAGAAAGGAGAAAAA+AGG - chr6_3:99854873-99854892 Msa0968630:CDS 40.0%
GCTATCACAAAATCAGCAAG+TGG - chr6_3:99854986-99855005 Msa0968630:intron 40.0%
TCAGAACCCTAAAAAAAGGG+CGG - chr6_3:99855088-99855107 Msa0968630:intron 40.0%
!!! CTAATCCCGCCCTTTTTTTA+GGG + chr6_3:99855097-99855116 None:intergenic 40.0%
CTAAAAAAAGGGCGGGATTA+GGG - chr6_3:99855096-99855115 Msa0968630:intron 40.0%
CCAAGTCTTTGCCCATAATA+TGG + chr6_3:99855265-99855284 None:intergenic 40.0%
CCATATTATGGGCAAAGACT+TGG - chr6_3:99855262-99855281 Msa0968630:intron 40.0%
GTTGTTGTCATGTGACTGAA+AGG - chr6_3:99855581-99855600 Msa0968630:CDS 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG - chr6_3:99855625-99855644 Msa0968630:CDS 40.0%
CAGCCTCTTGTGTAAAAACA+GGG - chr6_3:99855626-99855645 Msa0968630:CDS 40.0%
GTTGCGTACAATACACCAAA+TGG - chr6_3:99855653-99855672 Msa0968630:CDS 40.0%
CGTACAATACACCAAATGGT+GGG - chr6_3:99855657-99855676 Msa0968630:CDS 40.0%
TACTTGTACGTATGCATCCT+TGG - chr6_3:99855746-99855765 Msa0968630:CDS 40.0%
! GCATCCTTGGTTGATGTTAT+TGG - chr6_3:99855759-99855778 Msa0968630:intron 40.0%
ACAGCCAATAACATCAACCA+AGG + chr6_3:99855766-99855785 None:intergenic 40.0%
! GATGTTATTGGCTGTAATCG+TGG - chr6_3:99855771-99855790 Msa0968630:intron 40.0%
TTTACTCGGAGGTTATCATG+AGG + chr6_3:99855860-99855879 None:intergenic 40.0%
TAACCTCCGAGTAAAGATTC+TGG - chr6_3:99855865-99855884 Msa0968630:intron 40.0%
TTTCCAGAATCTTTACTCGG+AGG + chr6_3:99855871-99855890 None:intergenic 40.0%
! TCCGAGTAAAGATTCTGGAA+AGG - chr6_3:99855870-99855889 Msa0968630:intron 40.0%
TGCAATGTAACTGTGGTTAG+AGG - chr6_3:99855909-99855928 Msa0968630:CDS 40.0%
GCAATGTAACTGTGGTTAGA+GGG - chr6_3:99855910-99855929 Msa0968630:CDS 40.0%
AGAATCACAGTTAAACTCGG+TGG + chr6_3:99855947-99855966 None:intergenic 40.0%
CGCAGAATCACAGTTAAACT+CGG + chr6_3:99855950-99855969 None:intergenic 40.0%
CGAGTTTAACTGTGATTCTG+CGG - chr6_3:99855948-99855967 Msa0968630:CDS 40.0%
AATAGTATAGTGCAGCCTCT+TGG - chr6_3:99856223-99856242 Msa0968630:CDS 40.0%
ATAGTATAGTGCAGCCTCTT+GGG - chr6_3:99856224-99856243 Msa0968630:CDS 40.0%
GAGTGTGTATGGAAAATGGT+AGG + chr6_3:99856271-99856290 None:intergenic 40.0%
CCCGATAAAAATTGAGTGCA+AGG - chr6_3:99856676-99856695 Msa0968630:intron 40.0%
ACCTGATCTAAACCATCTCA+TGG - chr6_3:99856714-99856733 Msa0968630:intron 40.0%
TCCATGAGATGGTTTAGATC+AGG + chr6_3:99856718-99856737 None:intergenic 40.0%
!!! AGCTGGTTTTGTAAGGTTGA+GGG + chr6_3:99856840-99856859 None:intergenic 40.0%
!!! AAGCTGGTTTTGTAAGGTTG+AGG + chr6_3:99856841-99856860 None:intergenic 40.0%
!!! CCTTACAAGCTGGTTTTGTA+AGG + chr6_3:99856847-99856866 None:intergenic 40.0%
CCTTACAAAACCAGCTTGTA+AGG - chr6_3:99856844-99856863 Msa0968630:CDS 40.0%
TCCCACATTTCCTAGAGATA+CGG + chr6_3:99856904-99856923 None:intergenic 40.0%
CCTATCGTAGATCTGTTGTT+GGG + chr6_3:99857071-99857090 None:intergenic 40.0%
!! CCTTACAAGCCGATTTTGTA+AGG + chr6_3:99857135-99857154 None:intergenic 40.0%
!! CCTTACAAAATCGGCTTGTA+AGG - chr6_3:99857132-99857151 Msa0968630:intron 40.0%
! TTCACAAGTTTGTTTCTCCG+GGG + chr6_3:99857465-99857484 None:intergenic 40.0%
! CTTCACAAGTTTGTTTCTCC+GGG + chr6_3:99857466-99857485 None:intergenic 40.0%
! AGGCAGCTATTTCCTCAAAT+GGG + chr6_3:99857566-99857585 None:intergenic 40.0%
ATCCTCACTAATCTCCAATG+TGG + chr6_3:99857589-99857608 None:intergenic 40.0%
AGTAACAAAACCACACTGCT+TGG - chr6_3:99857732-99857751 Msa0968630:intron 40.0%
ATCATGTAAACCAAGCAGTG+TGG + chr6_3:99857745-99857764 None:intergenic 40.0%
ACACTGCTTGGTTTACATGA+TGG - chr6_3:99857744-99857763 Msa0968630:intron 40.0%
!! TGTTAATACCTTTTGGAGGC+AGG + chr6_3:99857925-99857944 None:intergenic 40.0%
TCATTGCATCAGTTGAGGTT+GGG + chr6_3:99858357-99858376 None:intergenic 40.0%
TTCATTGCATCAGTTGAGGT+TGG + chr6_3:99858358-99858377 None:intergenic 40.0%
GGTTAACAGCAAAGCAACAA+TGG - chr6_3:99858492-99858511 Msa0968630:intron 40.0%
GACTGCAAAATATCTTCACC+GGG + chr6_3:99858714-99858733 None:intergenic 40.0%
GGACTGCAAAATATCTTCAC+CGG + chr6_3:99858715-99858734 None:intergenic 40.0%
ACTCTCCAGCATTATCTACA+AGG + chr6_3:99858780-99858799 None:intergenic 40.0%
GTAGCAAGTCATAATTGGTG+TGG - chr6_3:99859272-99859291 Msa0968630:intron 40.0%
CATAATTGGTGTGGATACCA+TGG - chr6_3:99859281-99859300 Msa0968630:intron 40.0%
CATCTCAGAGATCATTTCCA+TGG + chr6_3:99859301-99859320 None:intergenic 40.0%
! CATGGAAATGATCTCTGAGA+TGG - chr6_3:99859299-99859318 Msa0968630:intron 40.0%
! GGTCCATCAGAAATTGACTT+TGG - chr6_3:99859330-99859349 Msa0968630:intron 40.0%
!! AGAAATTGACTTTGGGATCG+AGG - chr6_3:99859338-99859357 Msa0968630:intron 40.0%
! GATGCGATTTTCTCATCCAA+TGG - chr6_3:99859644-99859663 Msa0968630:intron 40.0%
GTCTCCAAAAGCCACAAATT+AGG + chr6_3:99859709-99859728 None:intergenic 40.0%
AAAAGGAAGTCTCGTCTGAA+GGG + chr6_3:99860083-99860102 None:intergenic 40.0%
TAAAAGGAAGTCTCGTCTGA+AGG + chr6_3:99860084-99860103 None:intergenic 40.0%
! CGAGACTTCCTTTTACAGAT+TGG - chr6_3:99860089-99860108 Msa0968630:intron 40.0%
TCGTGTAGTCTTCTACTTCA+AGG + chr6_3:99860657-99860676 None:intergenic 40.0%
TCTCTCTGTTGGATATGCAA+GGG - chr6_3:99860772-99860791 Msa0968630:intron 40.0%
!! GATATGCAAGGGTATTCAAG+TGG - chr6_3:99860783-99860802 Msa0968630:intron 40.0%
! TGTCTTCGATGCACTTTTGA+TGG - chr6_3:99860832-99860851 Msa0968630:intron 40.0%
! GTCTTCGATGCACTTTTGAT+GGG - chr6_3:99860833-99860852 Msa0968630:intron 40.0%
AAGGTAATGAACTTCCCCAA+TGG + chr6_3:99861123-99861142 None:intergenic 40.0%
AATGGAACAGATGACAAGGA+AGG + chr6_3:99861142-99861161 None:intergenic 40.0%
! TTTGACGTAAGGGTTTGTTC+AGG - chr6_3:99861277-99861296 Msa0968630:intron 40.0%
!! TGTTGCTTTGGGTGATTTCT+TGG + chr6_3:99861794-99861813 None:intergenic 40.0%
! TTCGCCCGTGAAATTTTGTA+TGG - chr6_3:99861857-99861876 Msa0968630:intron 40.0%
AACCTCATTGGAATGTGCAT+GGG + chr6_3:99861936-99861955 None:intergenic 40.0%
! AAGTCTTATCCCACTAAGTG+GGG + chr6_3:99862037-99862056 None:intergenic 40.0%
! CAAGTCTTATCCCACTAAGT+GGG + chr6_3:99862038-99862057 None:intergenic 40.0%
AATTAGGAGACAGGACAACA+AGG + chr6_3:99862080-99862099 None:intergenic 40.0%
GGTGGAGAAGAAAGAAGATG+AGG + chr6_3:99853316-99853335 None:intergenic 45.0%
AGAGAGAGAGAGAGAGAGTA+CGG + chr6_3:99853455-99853474 None:intergenic 45.0%
!! ATCGGTGTCAGTGTTGTATC+CGG + chr6_3:99853597-99853616 None:intergenic 45.0%
TAACCGTTCAACGTGGAATG+CGG - chr6_3:99853782-99853801 Msa0968630:CDS 45.0%
!! GATGTGAATGGTGGTGGATT+AGG - chr6_3:99853807-99853826 Msa0968630:CDS 45.0%
! TGTAGACTTGCTTGTAGCTG+TGG - chr6_3:99853843-99853862 Msa0968630:intron 45.0%
GCGGAATGCAAGAAGTTAAG+TGG - chr6_3:99854037-99854056 Msa0968630:intron 45.0%
GAAGTACGGTACTACGAACT+TGG - chr6_3:99854230-99854249 Msa0968630:intron 45.0%
AGCACCTATGGCAGAAAAGA+TGG - chr6_3:99854334-99854353 Msa0968630:intron 45.0%
TGGTAGAAAACAGGCTTAGG+TGG - chr6_3:99854354-99854373 Msa0968630:intron 45.0%
GAAAACAGGCTTAGGTGGTT+TGG - chr6_3:99854359-99854378 Msa0968630:intron 45.0%
GTAGTAAGGAGAGGATACTC+AGG - chr6_3:99854410-99854429 Msa0968630:intron 45.0%
! GTTGAAAACCCGCAGACTTT+TGG - chr6_3:99854840-99854859 Msa0968630:CDS 45.0%
CACAAAATCAGCAAGTGGCT+TGG - chr6_3:99854991-99855010 Msa0968630:intron 45.0%
! AAAATCAGCAAGTGGCTTGG+TGG - chr6_3:99854994-99855013 Msa0968630:intron 45.0%
CAGAACCCTAAAAAAAGGGC+GGG - chr6_3:99855089-99855108 Msa0968630:intron 45.0%
!!! CCTAATCCCGCCCTTTTTTT+AGG + chr6_3:99855098-99855117 None:intergenic 45.0%
CCTAAAAAAAGGGCGGGATT+AGG - chr6_3:99855095-99855114 Msa0968630:intron 45.0%
TCATGTGACTGAAAGGTCAC+AGG - chr6_3:99855588-99855607 Msa0968630:CDS 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + chr6_3:99855621-99855640 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG - chr6_3:99855656-99855675 Msa0968630:CDS 45.0%
! CATTGGCTGCAATGTAACTG+TGG - chr6_3:99855902-99855921 Msa0968630:CDS 45.0%
! TTGTGGTTTGTGGCTGAATG+AGG - chr6_3:99856017-99856036 Msa0968630:intron 45.0%
GTTTGTGGCTGAATGAGGAA+TGG - chr6_3:99856022-99856041 Msa0968630:intron 45.0%
GCAGGTTTATAGGCAGTTTC+AGG - chr6_3:99856640-99856659 Msa0968630:intron 45.0%
AAGTAGGGATGTCCATGAGA+TGG + chr6_3:99856729-99856748 None:intergenic 45.0%
ACTACATAGGCCGTATCTCT+AGG - chr6_3:99856891-99856910 Msa0968630:intron 45.0%
! GCCGTATCTCTAGGAAATGT+GGG - chr6_3:99856900-99856919 Msa0968630:intron 45.0%
TTCACCGTGTTAGGTGTGAA+GGG + chr6_3:99856937-99856956 None:intergenic 45.0%
TCTTACACCTTCACCGTGTT+AGG + chr6_3:99856946-99856965 None:intergenic 45.0%
! TAACACGGTGAAGGTGTAAG+AGG - chr6_3:99856945-99856964 Msa0968630:intron 45.0%
!!! TACTTGCGGCATTTTGGGTT+GGG + chr6_3:99856981-99857000 None:intergenic 45.0%
TTGGAAATTCCGCCTACTTG+CGG + chr6_3:99856995-99857014 None:intergenic 45.0%
!! AGCCTGAAGTGTTGACAATG+CGG - chr6_3:99857040-99857059 Msa0968630:CDS 45.0%
CCCAACAACAGATCTACGAT+AGG - chr6_3:99857068-99857087 Msa0968630:CDS 45.0%
GCCTATCGTAGATCTGTTGT+TGG + chr6_3:99857072-99857091 None:intergenic 45.0%
!! AAATCGGCTTGTAAGGTGAG+CGG - chr6_3:99857139-99857158 Msa0968630:intron 45.0%
! AGTTTGTTTCTCCGGGGAAA+TGG + chr6_3:99857459-99857478 None:intergenic 45.0%
ACAACATCCTAGCTCAGATC+AGG - chr6_3:99857506-99857525 Msa0968630:intron 45.0%
TCCTCAAATGGGTGATAGGA+TGG + chr6_3:99857555-99857574 None:intergenic 45.0%
! GAGGCAGCTATTTCCTCAAA+TGG + chr6_3:99857567-99857586 None:intergenic 45.0%
CTCACTAATCTCCAATGTGG+AGG + chr6_3:99857586-99857605 None:intergenic 45.0%
CTCCACATTGGAGATTAGTG+AGG - chr6_3:99857584-99857603 Msa0968630:intron 45.0%
TAGGATTACCTGCCTCCAAA+AGG - chr6_3:99857914-99857933 Msa0968630:intron 45.0%
CAAAACAGGCTGCACTAGAA+AGG + chr6_3:99858105-99858124 None:intergenic 45.0%
GGGTAAAACTTCCCAAGAAC+AGG + chr6_3:99858643-99858662 None:intergenic 45.0%
! ACAACAAGCCCAAAAGTGTG+AGG + chr6_3:99859061-99859080 None:intergenic 45.0%
!! ATCTCTGAGATGGACTTGTC+AGG - chr6_3:99859309-99859328 Msa0968630:intron 45.0%
TTATCGTTTGCAGGAATGGC+TGG - chr6_3:99859548-99859567 Msa0968630:intron 45.0%
! ATGATGAAGCACTTGCAGAC+TGG - chr6_3:99859607-99859626 Msa0968630:intron 45.0%
! TGATGAAGCACTTGCAGACT+GGG - chr6_3:99859608-99859627 Msa0968630:intron 45.0%
ACTTGCAGACTGGGCAAAAT+TGG - chr6_3:99859617-99859636 Msa0968630:intron 45.0%
! ACGCAGGTCTTATAACTCCT+TGG + chr6_3:99859876-99859895 None:intergenic 45.0%
! TTCGGCAGTACTGGATTGAT+TGG + chr6_3:99859938-99859957 None:intergenic 45.0%
TGTGTTTAGAGACAAGTGCC+AGG - chr6_3:99860184-99860203 Msa0968630:intron 45.0%
TGATCAACCTTAGGAGTTCC+TGG + chr6_3:99860205-99860224 None:intergenic 45.0%
ATATGAGGTATGACCTACCC+AGG - chr6_3:99860520-99860539 Msa0968630:intron 45.0%
TATGAGGTATGACCTACCCA+GGG - chr6_3:99860521-99860540 Msa0968630:intron 45.0%
CTCAACCTGATGCTATTGCA+AGG - chr6_3:99860680-99860699 Msa0968630:intron 45.0%
GATGACCTTGCAATAGCATC+AGG + chr6_3:99860688-99860707 None:intergenic 45.0%
AAGCCCTTAAGTCTCTCTGT+TGG - chr6_3:99860761-99860780 Msa0968630:intron 45.0%
GTCTCTCTGTTGGATATGCA+AGG - chr6_3:99860771-99860790 Msa0968630:intron 45.0%
!! ATGCAAGGGTATTCAAGTGG+AGG - chr6_3:99860786-99860805 Msa0968630:intron 45.0%
CGCGCAAAACCATTTAACTG+TGG + chr6_3:99860891-99860910 None:intergenic 45.0%
!! CAGTTAAATGGTTTTGCGCG+CGG - chr6_3:99860891-99860910 Msa0968630:intron 45.0%
ATCATACTTGCAGGCTACGT+CGG - chr6_3:99861730-99861749 Msa0968630:intron 45.0%
TTGTGTACAGAAGTGAAGGC+AGG - chr6_3:99861902-99861921 Msa0968630:intron 45.0%
TGTGTACAGAAGTGAAGGCA+GGG - chr6_3:99861903-99861922 Msa0968630:intron 45.0%
CAACCTCATTGGAATGTGCA+TGG + chr6_3:99861937-99861956 None:intergenic 45.0%
GGACAACAAGGAAGTAACAG+AGG + chr6_3:99862006-99862025 None:intergenic 45.0%
! CCAAGTCTTATCCCACTAAG+TGG + chr6_3:99862039-99862058 None:intergenic 45.0%
CCACTTAGTGGGATAAGACT+TGG - chr6_3:99862036-99862055 Msa0968630:intron 45.0%
! GTGGGATAAGACTTGGTTGT+TGG - chr6_3:99862043-99862062 Msa0968630:intron 45.0%
ATTTAGACCCGTGCAATGCA+TGG - chr6_3:99862226-99862245 Msa0968630:five_prime_UTR 45.0%
TTTAGACCCGTGCAATGCAT+GGG - chr6_3:99862227-99862246 Msa0968630:five_prime_UTR 45.0%
CATGGGTGTAGGAGATGTAA+AGG - chr6_3:99862244-99862263 Msa0968630:five_prime_UTR 45.0%
!!! GTTATTTTTTTTATAATTTT+GGG - chr6_3:99855970-99855989 Msa0968630:CDS 5.0%
!!! TTATTTTTTTTATAATTTTG+GGG - chr6_3:99855971-99855990 Msa0968630:CDS 5.0%
ATTGGAAAAGCGAGTGGAGG+AGG + chr6_3:99853430-99853449 None:intergenic 50.0%
GAGATTGGAAAAGCGAGTGG+AGG + chr6_3:99853433-99853452 None:intergenic 50.0%
ACGGAGATTGGAAAAGCGAG+TGG + chr6_3:99853436-99853455 None:intergenic 50.0%
! GAGAGAGAGAGTACGGAGAT+TGG + chr6_3:99853448-99853467 None:intergenic 50.0%
TGGAATGCGGAGGATGTGAA+TGG - chr6_3:99853795-99853814 Msa0968630:CDS 50.0%
AATGCGGAGGATGTGAATGG+TGG - chr6_3:99853798-99853817 Msa0968630:CDS 50.0%
! AGACTTGCTTGTAGCTGTGG+TGG - chr6_3:99853846-99853865 Msa0968630:intron 50.0%
CGGTACTACGAACTTGGTTC+CGG - chr6_3:99854236-99854255 Msa0968630:intron 50.0%
GAGTGTTAGGGTAGCACCTA+TGG - chr6_3:99854322-99854341 Msa0968630:CDS 50.0%
GAGGATACTCAGGTCACTAG+AGG - chr6_3:99854420-99854439 Msa0968630:intron 50.0%
AAACAAACCCGTGCATCGCA+CGG + chr6_3:99854503-99854522 None:intergenic 50.0%
GATTCGAACCCATGCCATGT+TGG + chr6_3:99855039-99855058 None:intergenic 50.0%
ATGGCATGGGTTCGAATCTC+TGG - chr6_3:99855041-99855060 Msa0968630:intron 50.0%
CATGGGTTCGAATCTCTGGA+GGG - chr6_3:99855045-99855064 Msa0968630:intron 50.0%
GGCGGGATTAGGGTTAATCA+GGG - chr6_3:99855106-99855125 Msa0968630:intron 50.0%
GTACTTGTGAGGGGTAACCT+TGG - chr6_3:99855545-99855564 Msa0968630:CDS 50.0%
CAACTTTACCAGTTGCGCCA+AGG + chr6_3:99855565-99855584 None:intergenic 50.0%
AAGGTCACAGGTTCAAGTCC+TGG - chr6_3:99855600-99855619 Msa0968630:CDS 50.0%
! GGCCGTATCTCTAGGAAATG+TGG - chr6_3:99856899-99856918 Msa0968630:intron 50.0%
TGACCCCTTCACACCTAACA+CGG - chr6_3:99856930-99856949 Msa0968630:intron 50.0%
TCACCGTGTTAGGTGTGAAG+GGG + chr6_3:99856936-99856955 None:intergenic 50.0%
CTTCACCGTGTTAGGTGTGA+AGG + chr6_3:99856938-99856957 None:intergenic 50.0%
CTTCACACCTAACACGGTGA+AGG - chr6_3:99856936-99856955 Msa0968630:intron 50.0%
!! CTACTTGCGGCATTTTGGGT+TGG + chr6_3:99856982-99857001 None:intergenic 50.0%
CAACCCAAAATGCCGCAAGT+AGG - chr6_3:99856980-99856999 Msa0968630:intron 50.0%
!! GCCTGAAGTGTTGACAATGC+GGG - chr6_3:99857041-99857060 Msa0968630:CDS 50.0%
!! CCTGAAGTGTTGACAATGCG+GGG - chr6_3:99857042-99857061 Msa0968630:CDS 50.0%
GCCATCCTATCACCCATTTG+AGG - chr6_3:99857551-99857570 Msa0968630:intron 50.0%
GGAAATAGCTGCCTCCACAT+TGG - chr6_3:99857572-99857591 Msa0968630:intron 50.0%
AGGGTCACCGAATCTAGGTA+TGG + chr6_3:99858913-99858932 None:intergenic 50.0%
AGAACAGGGTCACCGAATCT+AGG + chr6_3:99858918-99858937 None:intergenic 50.0%
TGACGATGAGCTTGACGATG+AGG - chr6_3:99859584-99859603 Msa0968630:intron 50.0%
GGCTGCTCCATCCAATCAAT+TGG + chr6_3:99859835-99859854 None:intergenic 50.0%
TGGAAGACTACACAAGCTGG+AGG + chr6_3:99859856-99859875 None:intergenic 50.0%
CCTTGGAAGACTACACAAGC+TGG + chr6_3:99859859-99859878 None:intergenic 50.0%
CCAGCTTGTGTAGTCTTCCA+AGG - chr6_3:99859856-99859875 Msa0968630:intron 50.0%
ACAAGTGCCAGGAACTCCTA+AGG - chr6_3:99860195-99860214 Msa0968630:intron 50.0%
ATCAACACTGAACCCTGGGT+AGG + chr6_3:99860536-99860555 None:intergenic 50.0%
!! CGCGCGGCTTTAGTGTATTT+TGG - chr6_3:99860907-99860926 Msa0968630:intron 50.0%
! GGAGGCACAACTTATCTGTG+TGG - chr6_3:99861243-99861262 Msa0968630:intron 50.0%
CTTATCTGTGTGGACTCGCT+CGG - chr6_3:99861253-99861272 Msa0968630:intron 50.0%
TTATCTGTGTGGACTCGCTC+GGG - chr6_3:99861254-99861273 Msa0968630:intron 50.0%
GTCCCATGCACATTCCAATG+AGG - chr6_3:99861931-99861950 Msa0968630:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr6_3:99862033-99862052 None:intergenic 50.0%
TCCTACACCCATGCATTGCA+CGG + chr6_3:99862237-99862256 None:intergenic 50.0%
CCTCCGCATTCCACGTTGAA+CGG + chr6_3:99853788-99853807 None:intergenic 55.0%
ACTCAGGTCACTAGAGGCAG+AGG - chr6_3:99854426-99854445 Msa0968630:intron 55.0%
AACAAACCCGTGCATCGCAC+GGG + chr6_3:99854502-99854521 None:intergenic 55.0%
GCATGGGTTCGAATCTCTGG+AGG - chr6_3:99855044-99855063 Msa0968630:intron 55.0%
GGGCGGGATTAGGGTTAATC+AGG - chr6_3:99855105-99855124 Msa0968630:intron 55.0%
CTACAGCTCCCGCATATGCA+GGG + chr6_3:99855696-99855715 None:intergenic 55.0%
ACTACAGCTCCCGCATATGC+AGG + chr6_3:99855697-99855716 None:intergenic 55.0%
GCAGCACTCACCTTACAAGC+TGG + chr6_3:99856857-99856876 None:intergenic 55.0%
! CCGCCTACTTGCGGCATTTT+GGG + chr6_3:99856986-99857005 None:intergenic 55.0%
CCCAAAATGCCGCAAGTAGG+CGG - chr6_3:99856983-99857002 Msa0968630:intron 55.0%
! TCCGCCTACTTGCGGCATTT+TGG + chr6_3:99856987-99857006 None:intergenic 55.0%
CCCCGCATTGTCAACACTTC+AGG + chr6_3:99857045-99857064 None:intergenic 55.0%
ACAGGCTCCTGATCTGAGCT+AGG + chr6_3:99857516-99857535 None:intergenic 55.0%
ACTCGCTCGGGTTTGACGTA+AGG - chr6_3:99861266-99861285 Msa0968630:intron 55.0%
CTCGCTCGGGTTTGACGTAA+GGG - chr6_3:99861267-99861286 Msa0968630:intron 55.0%
CCTACACCCATGCATTGCAC+GGG + chr6_3:99862236-99862255 None:intergenic 55.0%
AGGTGGAAGCGGGTGGCAAT+GGG + chr6_3:99853402-99853421 None:intergenic 60.0%
AGGAGGAGGAGAGGTGGAAG+CGG + chr6_3:99853413-99853432 None:intergenic 60.0%
GGAAAAGCGAGTGGAGGAGG+AGG + chr6_3:99853427-99853446 None:intergenic 60.0%
CCGTTCAACGTGGAATGCGG+AGG - chr6_3:99853785-99853804 Msa0968630:CDS 60.0%
GCGGAGGATGTGAATGGTGG+TGG - chr6_3:99853801-99853820 Msa0968630:CDS 60.0%
ACCCTAACCCGTGCGATGCA+CGG - chr6_3:99854492-99854511 Msa0968630:intron 60.0%
AGGGGTAACCTTGGCGCAAC+TGG - chr6_3:99855554-99855573 Msa0968630:CDS 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr6_3:99855669-99855688 Msa0968630:CDS 60.0%
CATATGCAGGGTCCGGGAAG+GGG + chr6_3:99855684-99855703 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG + chr6_3:99855685-99855704 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG - chr6_3:99855684-99855703 Msa0968630:CDS 60.0%
TTCCCGGACCCTGCATATGC+GGG - chr6_3:99855685-99855704 Msa0968630:CDS 60.0%
ATGCGGGAGCTGTAGTGCAC+CGG - chr6_3:99855701-99855720 Msa0968630:CDS 60.0%
CTCATTACCCGAGCGTGAGC+GGG + chr6_3:99857022-99857041 None:intergenic 60.0%
GCTCATTACCCGAGCGTGAG+CGG + chr6_3:99857023-99857042 None:intergenic 60.0%
ACCCGAGCACTCCATTTCCC+CGG - chr6_3:99857445-99857464 Msa0968630:intron 60.0%
! TCCGGGGAAATGGAGTGCTC+GGG + chr6_3:99857449-99857468 None:intergenic 60.0%
! CTCCGGGGAAATGGAGTGCT+CGG + chr6_3:99857450-99857469 None:intergenic 60.0%
! CTGTGCCGACCCCACTTAGT+GGG - chr6_3:99862025-99862044 Msa0968630:intron 60.0%
CCCGTGCAATGCATGGGTGT+AGG - chr6_3:99862233-99862252 Msa0968630:five_prime_UTR 60.0%
TGGAAGCGGGTGGCAATGGG+AGG + chr6_3:99853399-99853418 None:intergenic 65.0%
GAGGTGGAAGCGGGTGGCAA+TGG + chr6_3:99853403-99853422 None:intergenic 65.0%
GGAGGAGGAGAGGTGGAAGC+GGG + chr6_3:99853412-99853431 None:intergenic 65.0%
GAGTGGAGGAGGAGGAGAGG+TGG + chr6_3:99853419-99853438 None:intergenic 65.0%
AGCGAGTGGAGGAGGAGGAG+AGG + chr6_3:99853422-99853441 None:intergenic 65.0%
! CCCGTGCATCGCACGGGTTA+GGG + chr6_3:99854496-99854515 None:intergenic 65.0%
CCCTAACCCGTGCGATGCAC+GGG - chr6_3:99854493-99854512 Msa0968630:intron 65.0%
ACCCGTGCATCGCACGGGTT+AGG + chr6_3:99854497-99854516 None:intergenic 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr6_3:99855671-99855690 None:intergenic 65.0%
CGCATATGCAGGGTCCGGGA+AGG + chr6_3:99855686-99855705 None:intergenic 65.0%
CTCCCGCATATGCAGGGTCC+GGG + chr6_3:99855690-99855709 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG + chr6_3:99855691-99855710 None:intergenic 65.0%
TGCGGGAGCTGTAGTGCACC+GGG - chr6_3:99855702-99855721 Msa0968630:CDS 65.0%
CCAACACACCCGCTCACGCT+CGG - chr6_3:99857011-99857030 Msa0968630:CDS 65.0%
CAACACACCCGCTCACGCTC+GGG - chr6_3:99857012-99857031 Msa0968630:CDS 65.0%
GGGGTCGGCACAGGACAACA+AGG + chr6_3:99862018-99862037 None:intergenic 65.0%
CCACTAAGTGGGGTCGGCAC+AGG + chr6_3:99862027-99862046 None:intergenic 65.0%
! CCTGTGCCGACCCCACTTAG+TGG - chr6_3:99862024-99862043 Msa0968630:intron 65.0%
GGAGGAGAGGTGGAAGCGGG+TGG + chr6_3:99853409-99853428 None:intergenic 70.0%
GTGGTGGTTTCGACGCGCCG+TGG - chr6_3:99853862-99853881 Msa0968630:intron 70.0%
CCGAGCGTGAGCGGGTGTGT+TGG + chr6_3:99857014-99857033 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 99853277 99862312 99853277 ID=Msa0968630;Name=Msa0968630
chr6_3 mRNA 99853277 99862312 99853277 ID=Msa0968630-mRNA-1;Parent=Msa0968630;Name=Msa0968630-mRNA-1;_AED=0.06;_eAED=0.06;_QI=104|0.90|0.91|1|0.81|0.75|12|403|510
chr6_3 exon 99853277 99853500 99853277 ID=Msa0968630-mRNA-1:exon:18744;Parent=Msa0968630-mRNA-1
chr6_3 exon 99853563 99853846 99853563 ID=Msa0968630-mRNA-1:exon:18743;Parent=Msa0968630-mRNA-1
chr6_3 exon 99854250 99854345 99854250 ID=Msa0968630-mRNA-1:exon:18742;Parent=Msa0968630-mRNA-1
chr6_3 exon 99854782 99854940 99854782 ID=Msa0968630-mRNA-1:exon:18741;Parent=Msa0968630-mRNA-1
chr6_3 exon 99855437 99855772 99855437 ID=Msa0968630-mRNA-1:exon:18740;Parent=Msa0968630-mRNA-1
chr6_3 exon 99855900 99856028 99855900 ID=Msa0968630-mRNA-1:exon:18739;Parent=Msa0968630-mRNA-1
chr6_3 exon 99856137 99856313 99856137 ID=Msa0968630-mRNA-1:exon:18738;Parent=Msa0968630-mRNA-1
chr6_3 exon 99856831 99856898 99856831 ID=Msa0968630-mRNA-1:exon:18737;Parent=Msa0968630-mRNA-1
chr6_3 exon 99856994 99857096 99856994 ID=Msa0968630-mRNA-1:exon:18736;Parent=Msa0968630-mRNA-1
chr6_3 exon 99857939 99858161 99857939 ID=Msa0968630-mRNA-1:exon:18735;Parent=Msa0968630-mRNA-1
chr6_3 exon 99861748 99861811 99861748 ID=Msa0968630-mRNA-1:exon:18734;Parent=Msa0968630-mRNA-1
chr6_3 exon 99862136 99862312 99862136 ID=Msa0968630-mRNA-1:exon:18733;Parent=Msa0968630-mRNA-1
chr6_3 five_prime_UTR 99862209 99862312 99862209 ID=Msa0968630-mRNA-1:five_prime_utr;Parent=Msa0968630-mRNA-1
chr6_3 CDS 99862136 99862208 99862136 ID=Msa0968630-mRNA-1:cds;Parent=Msa0968630-mRNA-1
chr6_3 CDS 99861748 99861811 99861748 ID=Msa0968630-mRNA-1:cds;Parent=Msa0968630-mRNA-1
chr6_3 CDS 99857939 99858161 99857939 ID=Msa0968630-mRNA-1:cds;Parent=Msa0968630-mRNA-1
chr6_3 CDS 99856994 99857096 99856994 ID=Msa0968630-mRNA-1:cds;Parent=Msa0968630-mRNA-1
chr6_3 CDS 99856831 99856898 99856831 ID=Msa0968630-mRNA-1:cds;Parent=Msa0968630-mRNA-1
chr6_3 CDS 99856137 99856313 99856137 ID=Msa0968630-mRNA-1:cds;Parent=Msa0968630-mRNA-1
chr6_3 CDS 99855900 99856028 99855900 ID=Msa0968630-mRNA-1:cds;Parent=Msa0968630-mRNA-1
chr6_3 CDS 99855437 99855772 99855437 ID=Msa0968630-mRNA-1:cds;Parent=Msa0968630-mRNA-1
chr6_3 CDS 99854782 99854940 99854782 ID=Msa0968630-mRNA-1:cds;Parent=Msa0968630-mRNA-1
chr6_3 CDS 99854250 99854345 99854250 ID=Msa0968630-mRNA-1:cds;Parent=Msa0968630-mRNA-1
chr6_3 CDS 99853742 99853846 99853742 ID=Msa0968630-mRNA-1:cds;Parent=Msa0968630-mRNA-1
chr6_3 three_prime_UTR 99853563 99853741 99853563 ID=Msa0968630-mRNA-1:three_prime_utr;Parent=Msa0968630-mRNA-1
chr6_3 three_prime_UTR 99853277 99853500 99853277 ID=Msa0968630-mRNA-1:three_prime_utr;Parent=Msa0968630-mRNA-1
Gene Sequence

>Msa0968630

ATGATGATTATCGATCCTCCCATTGCCACCCGCTTCCACCTCTCCTCCTCCTCCACTCGCTTTTCCAATCTCCATAATAACCGTTCAACGTGGAATGCGGAGGATGTGAATGGTGGTGGATTAGGTTATGTTGCGTCGATAAGAAGTAAAAAGTACCCGAGCACTCCATTTCCCCGGAGAAACAAACTTGTGAAGAATAGAATTCGAGTATCATCACAACATCCTAGCTCAGATCAGGAGCCTGTAAAGAAAAATGAGAAGCCATCCTATCACCCATTTGAGGAAATAGCTGCCTCCACATTGGAGATTAGTGAGGATGTTAGACTTACTGCAGCAGAAACAAGTAGAACTGTTATCGAGGTTAACAGCAAAGCAACAATGGTGTTTTCAACTTTCGTTAATGATGAATTTCATGATAATATTGTTTGGCCAGATTTGCCATATTTGACAGATGAACATGGAAATATATATTTTCAAGCAAAGCCCGGTGAAGATATTTTGCAGTCCCTAACTTCAGAAAATAATTTTGTGCAAGTCATAATTGGTGTGGATACCATGGAAATGATCTCTGAGATGGACTTGTCAGGTCCATCAGAAATTGACTTTGGGATCGAGGAAATTGATGACGAAGATACTGATGATTTAGATGACAGCGATGTTGAAGATGACGTAGATGAAAATGAAGATGAGAATGAGGATTATGACTCGGAATGGCTGGCTGTTCTTTCAGATGACGATGAGCTTGACGATGAGGATGATGAAGCACTTGCAGACTGGGCAAAATTGGAGACGATGCGATTTTCTCATCCAATGGATTTTGCTAAAAAATTGACTGAGATTGCTTCAGATGATCCAATTGATTGGATGGAGCAGCCTCCAGCTTGTGTAGTCTTCCAAGGAGTTATAAGACCTGCGTTTATTGAAGAAAATTCTCCAATACAGAAGCATATATCTGCCAATCAATCCAGTACTGCCGAAATTAGTAAAGTAACAGAAAATAAAGAAGAAAGTGTTGGTGTGATTAATGGTCATGAGCACAATAAAGAGTCGTCTGAAGATAACGCATCACAAAAGTTGGAAAATAATGAGAATGGTGATATCCCTTCAGACGAGACTTCCTTTTACAGATTGGAGATTGTTAAGATTCAAGTGTTTTCTGCACACGGACATCCCGTTGTCCTTGAAGTAGAAGACTACACGAAAGCTCAACCTGATGCTATTGCAAGGTCATCTTCAAAAATTATATCTCATTTGAAAGCTGCTGGAGAATCAGAAAAGACTTTGCAAGCCCTTAAGTCTCTCTGTTGGATATGCAAGGGTATTCAAGTGGAGGAGGCACAACTTATCTGTGTGGACTCGCTCGGGTTTGACGTAAGGGTTTGTTCAGGAACTCAAGTTCAAACACTGAGATTCGGATTCAAGAAAAGGGCTACGTCGGAATACAGTGCCGAGAGACAACTCAATGATATACTATTTCCAAGAAATCACCCAAAGCAACAAAAAACGAAGCAAACACATCAAAATGAATGCTAA

Protein sequence

>Msa0968630

MMIIDPPIATRFHLSSSSTRFSNLHNNRSTWNAEDVNGGGLGYVASIRSKKYPSTPFPRRNKLVKNRIRVSSQHPSSDQEPVKKNEKPSYHPFEEIAASTLEISEDVRLTAAETSRTVIEVNSKATMVFSTFVNDEFHDNIVWPDLPYLTDEHGNIYFQAKPGEDILQSLTSENNFVQVIIGVDTMEMISEMDLSGPSEIDFGIEEIDDEDTDDLDDSDVEDDVDENEDENEDYDSEWLAVLSDDDELDDEDDEALADWAKLETMRFSHPMDFAKKLTEIASDDPIDWMEQPPACVVFQGVIRPAFIEENSPIQKHISANQSSTAEISKVTENKEESVGVINGHEHNKESSEDNASQKLENNENGDIPSDETSFYRLEIVKIQVFSAHGHPVVLEVEDYTKAQPDAIARSSSKIISHLKAAGESEKTLQALKSLCWICKGIQVEEAQLICVDSLGFDVRVCSGTQVQTLRFGFKKRATSEYSAERQLNDILFPRNHPKQQKTKQTHQNEC*