AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0667640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0667640 MtrunA17_Chr4g0006131 83.597 506 33 5 1 456 1 506 0.0 814
Msa0667640 MtrunA17_Chr4g0006111 71.992 482 84 5 20 450 43 524 0.0 685
Msa0667640 MtrunA17_Chr4g0033261 60.124 484 132 10 19 450 18 492 0.0 540
Msa0667640 MtrunA17_Chr4g0033231 57.676 482 143 11 21 450 20 492 0.0 524
Msa0667640 MtrunA17_Chr2g0301231 64.810 395 124 4 67 450 1 391 6.64e-177 500
Msa0667640 MtrunA17_Chr2g0329191 53.673 490 139 11 38 450 30 508 1.75e-168 483
Msa0667640 MtrunA17_Chr2g0329201 52.113 497 151 9 32 451 21 507 8.84e-167 479
Msa0667640 MtrunA17_Chr4g0033271 53.074 488 142 9 42 452 35 512 4.78e-165 475
Msa0667640 MtrunA17_Chr4g0033201 50.716 489 154 9 41 452 35 513 5.28e-163 469
Msa0667640 MtrunA17_Chr4g0033311 50.294 511 162 10 17 450 19 514 1.47e-160 464
Msa0667640 MtrunA17_Chr4g0033191 50.924 487 152 10 41 450 42 518 1.80e-160 464
Msa0667640 MtrunA17_Chr3g0088441 51.400 500 151 11 28 450 29 513 3.86e-160 463
Msa0667640 MtrunA17_Chr6g0482131 50.204 490 157 8 42 454 36 515 1.15e-159 461
Msa0667640 MtrunA17_Chr6g0482071 50.299 501 160 10 33 454 26 516 5.10e-158 457
Msa0667640 MtrunA17_Chr4g0033321 51.546 485 148 9 42 449 33 507 4.34e-157 455
Msa0667640 MtrunA17_Chr4g0033401 51.340 485 149 9 42 449 34 508 1.21e-156 454
Msa0667640 MtrunA17_Chr4g0033341 49.901 505 165 11 23 452 53 544 1.23e-155 452
Msa0667640 MtrunA17_Chr4g0033331 49.691 485 157 8 42 449 39 513 2.26e-151 441
Msa0667640 MtrunA17_Chr6g0482081 50.000 490 159 8 42 454 36 516 1.83e-148 433
Msa0667640 MtrunA17_Chr2g0329321 47.984 496 145 11 32 450 28 487 2.25e-143 419
Msa0667640 MtrunA17_Chr4g0010501 45.070 497 180 10 31 450 13 493 8.75e-137 402
Msa0667640 MtrunA17_Chr3g0087261 43.366 505 192 10 23 449 19 507 9.57e-127 377
Msa0667640 MtrunA17_Chr5g0430451 43.893 524 159 11 20 451 18 498 2.29e-124 370
Msa0667640 MtrunA17_Chr3g0087271 43.400 500 192 11 26 449 24 508 3.49e-120 360
Msa0667640 MtrunA17_Chr4g0043091 41.020 490 199 9 39 450 25 502 8.79e-120 359
Msa0667640 MtrunA17_Chr4g0042171 39.279 499 210 10 32 450 14 499 5.22e-111 337
Msa0667640 MtrunA17_Chr4g0074561 41.315 426 203 11 60 449 96 510 1.22e-102 316
Msa0667640 MtrunA17_Chr3g0090111 38.655 476 213 9 41 450 18 480 1.35e-102 314
Msa0667640 MtrunA17_Chr3g0090131 38.025 476 217 10 41 450 20 483 1.13e-99 307
Msa0667640 MtrunA17_Chr4g0074551 39.184 490 213 11 39 453 47 526 2.89e-98 305
Msa0667640 MtrunA17_Chr2g0317841 37.938 485 213 13 41 449 31 503 2.56e-97 302
Msa0667640 MtrunA17_Chr2g0288071 40.984 427 209 10 60 453 128 544 1.21e-96 301
Msa0667640 MtrunA17_Chr2g0288021 38.979 431 219 10 60 456 95 515 1.39e-95 297
Msa0667640 MtrunA17_Chr6g0482941 37.525 501 217 14 31 453 32 514 3.98e-95 296
Msa0667640 MtrunA17_Chr2g0317821 37.320 485 216 13 41 449 31 503 7.43e-95 296
Msa0667640 MtrunA17_Chr6g0482951 35.944 498 229 12 31 453 32 514 5.78e-92 288
Msa0667640 MtrunA17_Chr7g0234111 35.897 507 245 11 10 452 44 534 5.40e-90 283
Msa0667640 MtrunA17_Chr7g0234131 36.523 512 236 16 9 449 39 532 5.60e-90 283
Msa0667640 MtrunA17_Chr7g0234091 35.516 504 247 11 9 449 43 531 7.16e-89 280
Msa0667640 MtrunA17_Chr3g0087201 44.606 343 141 9 143 451 17 344 1.24e-85 266
Msa0667640 MtrunA17_Chr4g0006971 38.353 425 205 9 60 449 87 489 7.43e-84 267
Msa0667640 MtrunA17_Chr7g0242691 33.531 507 240 12 20 450 9 494 9.70e-84 266
Msa0667640 MtrunA17_Chr7g0242681 36.325 468 239 13 18 450 57 500 6.04e-83 265
Msa0667640 MtrunA17_Chr5g0428831 33.951 486 225 11 43 453 28 492 1.30e-81 261
Msa0667640 MtrunA17_Chr1g0195611 33.539 486 226 11 43 453 28 491 1.58e-80 258
Msa0667640 MtrunA17_Chr7g0230651 36.243 378 186 9 44 388 13 368 3.78e-70 227
Msa0667640 MtrunA17_Chr5g0418871 43.396 265 114 6 60 290 43 305 7.71e-64 209
Msa0667640 MtrunA17_Chr1g0195641 34.821 336 169 8 60 361 85 404 3.70e-54 186
Msa0667640 MtrunA17_Chr7g0236731 41.964 224 102 6 88 283 28 251 9.52e-40 144
Msa0667640 MtrunA17_Chr3g0087191 46.711 152 38 1 34 142 14 165 9.98e-38 135
Msa0667640 MtrunA17_Chr7g0227561 34.071 226 98 5 35 235 79 278 2.08e-35 133
Msa0667640 MtrunA17_Chr4g0068871 28.186 408 224 13 63 454 183 537 7.83e-29 119
Msa0667640 MtrunA17_Chr5g0418861 51.111 90 43 1 361 449 1 90 3.44e-26 101
Msa0667640 MtrunA17_Chr7g0227591 46.429 56 30 0 397 452 13 68 6.67e-12 60.8
Msa0667640 MtrunA17_Chr7g0236741 37.931 58 36 0 397 454 10 67 6.66e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0667640 AT2G44450.1 43.600 500 190 11 31 453 20 504 3.85e-130 386
Msa0667640 AT5G44640.1 42.715 501 194 10 31 453 20 505 8.38e-130 385
Msa0667640 AT5G42260.1 42.799 493 189 10 31 445 20 497 1.55e-126 377
Msa0667640 AT3G60130.2 45.747 435 185 10 52 450 30 449 3.78e-124 369
Msa0667640 AT3G60130.1 44.396 455 193 11 38 450 65 501 1.52e-123 369
Msa0667640 AT3G60130.3 44.931 434 179 10 52 450 30 438 5.48e-120 358
Msa0667640 AT3G60120.1 41.153 503 194 14 34 451 6 491 4.83e-119 358
Msa0667640 AT2G44480.1 41.633 490 200 9 39 452 32 511 7.05e-119 357
Msa0667640 AT2G44480.3 41.633 490 200 9 39 452 63 542 2.05e-118 357
Msa0667640 AT1G26560.1 41.889 487 194 11 41 449 31 506 1.24e-117 354
Msa0667640 AT2G25630.1 40.524 496 187 10 31 449 19 483 7.38e-117 351
Msa0667640 AT2G44480.2 44.630 419 189 8 67 452 1 409 1.84e-116 348
Msa0667640 AT5G24550.1 42.704 466 218 10 25 452 58 512 3.03e-116 351
Msa0667640 AT2G44490.1 39.388 490 208 10 44 453 16 496 6.51e-116 351
Msa0667640 AT5G54570.1 40.404 495 201 11 36 449 24 505 1.53e-115 350
Msa0667640 AT3G60140.1 40.891 494 199 12 38 450 22 503 2.67e-113 345
Msa0667640 AT1G51470.1 40.664 482 203 10 38 449 41 509 5.52e-112 340
Msa0667640 AT5G54570.2 43.943 421 185 10 67 449 1 408 1.44e-111 336
Msa0667640 AT1G47600.1 40.909 484 199 12 38 449 41 509 2.40e-111 338
Msa0667640 AT3G03640.1 39.453 512 215 12 19 450 17 513 6.07e-110 335
Msa0667640 AT1G47600.2 40.909 484 198 13 38 449 41 508 6.32e-110 334
Msa0667640 AT5G24540.1 43.692 428 199 10 60 452 92 512 8.88e-109 332
Msa0667640 AT5G36890.1 43.029 416 201 8 60 450 76 480 6.47e-108 328
Msa0667640 AT5G36890.2 43.029 416 201 8 60 450 76 480 6.95e-108 328
Msa0667640 AT3G18080.1 39.059 489 203 12 42 452 39 510 2.50e-102 315
Msa0667640 AT2G44460.1 39.919 496 212 10 32 450 19 505 5.51e-102 316
Msa0667640 AT3G09260.1 38.115 488 216 9 39 449 32 510 7.01e-102 314
Msa0667640 AT1G75940.1 36.328 512 216 11 31 449 23 517 1.33e-101 313
Msa0667640 AT5G25980.2 42.588 425 200 13 60 450 109 523 2.10e-101 313
Msa0667640 AT2G32860.2 36.310 504 231 11 32 455 84 577 3.45e-101 315
Msa0667640 AT2G32860.1 35.756 509 226 13 32 455 84 576 7.19e-101 314
Msa0667640 AT2G44470.3 37.200 500 223 11 30 449 17 505 9.14e-101 313
Msa0667640 AT5G26000.1 41.704 446 207 13 47 449 76 511 2.24e-100 311
Msa0667640 AT1G66270.1 39.024 492 201 12 41 449 35 510 2.74e-100 310
Msa0667640 AT1G66280.1 38.763 485 212 10 41 449 35 510 8.66e-100 308
Msa0667640 AT2G44450.2 45.652 368 151 10 120 453 1 353 1.26e-99 303
Msa0667640 AT3G18070.3 38.160 511 212 15 22 453 9 494 1.86e-98 304
Msa0667640 AT3G18070.1 38.356 511 217 15 22 453 9 500 2.12e-98 304
Msa0667640 AT1G66270.2 38.821 492 200 13 41 449 35 508 7.37e-98 303
Msa0667640 AT5G28510.1 37.045 494 218 11 39 449 36 519 4.31e-97 302
Msa0667640 AT1G52400.3 36.527 501 225 13 30 450 29 516 1.09e-96 301
Msa0667640 AT1G52400.1 36.527 501 225 13 30 450 29 516 1.09e-96 301
Msa0667640 AT3G21370.1 36.735 490 219 12 42 450 33 512 2.17e-95 297
Msa0667640 AT1G61820.1 38.876 427 217 10 60 452 91 507 1.63e-93 292
Msa0667640 AT4G21760.2 39.161 429 213 12 60 455 114 527 3.10e-91 287
Msa0667640 AT5G54570.3 37.415 441 183 10 36 396 24 451 1.81e-89 280
Msa0667640 AT4G21760.1 38.551 428 207 12 60 455 114 517 2.97e-88 279
Msa0667640 AT4G27830.1 35.714 462 240 12 22 449 46 484 3.89e-86 273
Msa0667640 AT1G61810.1 35.041 488 230 10 42 452 33 510 7.06e-86 273
Msa0667640 AT1G02850.2 35.113 487 218 10 39 450 23 486 2.03e-85 271
Msa0667640 AT1G61810.5 37.381 420 219 9 67 452 1 410 2.38e-83 263
Msa0667640 AT3G62750.1 33.610 482 235 12 31 449 14 473 2.98e-83 265
Msa0667640 AT3G62750.2 33.610 482 235 12 31 449 40 499 5.87e-83 265
Msa0667640 AT5G25980.3 41.081 370 176 11 59 396 108 467 5.96e-82 261
Msa0667640 AT5G25980.1 41.081 370 176 11 59 396 108 467 5.96e-82 261
Msa0667640 AT1G02850.1 34.583 480 203 9 39 450 23 459 7.12e-82 261
Msa0667640 AT1G02850.5 33.529 510 218 11 39 450 23 509 9.45e-82 262
Msa0667640 AT5G24540.2 40.811 370 178 9 60 395 92 454 3.14e-81 258
Msa0667640 AT4G27830.2 37.170 417 207 11 67 449 1 396 4.55e-81 257
Msa0667640 AT4G27820.1 35.281 462 240 13 22 449 46 482 2.36e-80 258
Msa0667640 AT1G61810.3 35.054 465 216 9 42 429 33 488 3.61e-80 258
Msa0667640 AT1G02850.4 33.464 511 218 12 39 450 23 510 4.57e-80 258
Msa0667640 AT5G26000.2 39.898 391 184 11 47 396 76 456 1.06e-79 254
Msa0667640 AT3G60140.2 39.250 400 157 11 38 360 22 412 2.72e-79 253
Msa0667640 AT3G62750.6 35.294 408 219 10 67 449 1 388 9.37e-78 248
Msa0667640 AT3G62750.5 35.294 408 219 10 67 449 1 388 9.37e-78 248
Msa0667640 AT2G44470.1 35.056 445 199 10 30 395 17 450 4.48e-77 248
Msa0667640 AT4G22100.1 34.511 481 226 12 43 452 23 485 5.66e-77 249
Msa0667640 AT5G48375.1 40.374 374 158 12 58 414 86 411 1.08e-76 246
Msa0667640 AT4G27820.2 36.691 417 210 12 67 449 1 397 3.85e-76 244
Msa0667640 AT4G27820.3 36.691 417 210 12 67 449 1 397 3.85e-76 244
Msa0667640 AT1G61820.3 37.701 374 190 9 113 452 4 368 8.55e-76 242
Msa0667640 AT3G62740.1 32.587 491 233 14 31 449 14 478 2.12e-75 245
Msa0667640 AT2G44460.2 41.848 368 170 9 118 450 1 359 4.36e-75 242
Msa0667640 AT1G60090.2 33.125 480 230 12 42 450 24 483 1.05e-72 238
Msa0667640 AT1G52400.2 34.382 445 200 12 30 395 29 460 3.60e-71 233
Msa0667640 AT1G45191.4 32.985 479 226 10 43 450 30 484 1.61e-70 232
Msa0667640 AT1G60090.1 32.510 486 232 13 42 450 24 490 3.64e-70 231
Msa0667640 AT1G45191.6 32.777 479 238 10 43 450 30 495 4.74e-69 228
Msa0667640 AT1G45191.2 32.777 479 233 11 43 450 30 490 8.12e-69 228
Msa0667640 AT3G18070.2 35.608 469 211 17 22 453 9 423 1.14e-68 225
Msa0667640 AT1G45191.1 33.409 440 247 9 44 450 81 507 2.77e-67 224
Msa0667640 AT3G62750.4 32.093 430 208 11 31 398 40 447 1.13e-65 218
Msa0667640 AT2G44470.2 37.048 332 133 7 30 285 17 348 2.58e-64 213
Msa0667640 AT2G44480.4 42.193 301 99 7 39 264 63 363 6.45e-64 211
Msa0667640 AT2G44480.5 40.071 282 150 6 180 452 34 305 9.45e-62 203
Msa0667640 AT3G62740.2 32.168 429 194 13 31 388 14 416 2.08e-60 203
Msa0667640 AT3G18070.7 41.259 286 141 9 180 453 41 311 4.68e-59 196
Msa0667640 AT3G62750.7 35.826 321 140 8 31 289 14 330 1.30e-58 197
Msa0667640 AT3G62750.8 35.826 321 140 8 31 289 14 330 1.30e-58 197
Msa0667640 AT3G62750.3 35.826 321 140 8 31 289 40 356 1.16e-57 196
Msa0667640 AT1G02850.3 32.220 419 170 9 39 360 23 424 1.75e-57 196
Msa0667640 AT3G18070.4 36.283 339 137 9 22 285 9 343 1.30e-54 187
Msa0667640 AT1G61810.4 31.818 396 184 9 42 360 33 419 1.93e-54 187
Msa0667640 AT1G51490.1 37.456 283 150 4 60 316 78 359 2.19e-54 187
Msa0667640 AT1G60270.1 35.385 325 136 8 42 295 24 345 3.46e-50 175
Msa0667640 AT1G45191.5 33.866 313 135 6 43 285 30 340 3.00e-47 168
Msa0667640 AT1G45191.3 33.866 313 135 6 43 285 30 340 3.11e-47 168
Msa0667640 AT1G60270.2 38.095 252 122 6 67 286 1 250 1.02e-45 160
Msa0667640 AT1G61810.2 33.080 263 104 4 42 233 33 294 1.02e-37 140
Msa0667640 AT3G18070.5 32.011 378 169 15 22 362 9 335 5.37e-36 136
Msa0667640 AT3G06510.2 25.629 437 242 12 58 454 155 548 1.55e-30 125
Msa0667640 AT5G16580.1 31.849 292 150 11 145 406 27 299 3.92e-29 116
Msa0667640 AT3G06510.1 25.701 428 219 13 58 454 155 514 1.62e-28 119
Msa0667640 AT3G18070.6 36.923 195 99 7 180 362 41 223 8.25e-27 108

Find 121 sgRNAs with CRISPR-Local

Find 575 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGAGATACATGGGGTGATTT+TGG 0.137457 4_4:-8145731 None:intergenic
CTTGAACATAATAGAATTAT+TGG 0.142938 4_4:+8145489 Msa0667640:CDS
CTTAAATCACCCCTCTTTAT+TGG 0.162034 4_4:-8145695 None:intergenic
GATATATGCTTCAAGGAATT+TGG 0.182257 4_4:+8143956 Msa0667640:CDS
GAGCAATCTAAGAGTCTTAT+TGG 0.231240 4_4:+8144401 Msa0667640:CDS
ACTGTTAATGTGACTTTAAC+AGG 0.248704 4_4:+8144542 Msa0667640:CDS
GGGGAAGATCCCAATGAAAA+AGG 0.264707 4_4:-8143396 None:intergenic
ACGATTATCATAACAGAAAA+TGG 0.280720 4_4:+8144866 Msa0667640:CDS
CAAAGCTCACGCAGTATTAT+TGG 0.285995 4_4:-8145534 None:intergenic
CTTGTTTAAGTGCATGTATT+CGG 0.290606 4_4:-8136397 None:intergenic
ATACTTTGCATGGTCCCTTT+TGG 0.290939 4_4:+8145353 Msa0667640:CDS
TACAAAACGTACCTGGTAAT+TGG 0.306037 4_4:-8141198 None:intergenic
AGCTCTCTGCCCGGTGGTTT+AGG 0.309537 4_4:+8145460 Msa0667640:CDS
GACGGATACACTGTGCGTTT+TGG 0.311280 4_4:+8145393 Msa0667640:CDS
CAATAAAGAGGGGTGATTTA+AGG 0.315275 4_4:+8145696 Msa0667640:three_prime_UTR
ATGTTTGTCCAAAGGGGATT+CGG 0.336791 4_4:+8144804 Msa0667640:CDS
TGTGGTCTCTTTCTCTTTGA+AGG 0.337983 4_4:-8139177 None:intergenic
ACCACATATCAGGCTCAAAA+TGG 0.345183 4_4:+8144103 Msa0667640:CDS
TTCTTGTTTCGCTCAGGTCT+TGG 0.348865 4_4:+8145879 Msa0667640:three_prime_UTR
TCTAATGGGTCAGTTGAGTA+TGG 0.349718 4_4:-8144163 None:intergenic
CATGAAATCAAGGGCGTCTT+CGG 0.355937 4_4:-8144197 None:intergenic
GCAGTGAACGTTGGTAAATC+TGG 0.366493 4_4:-8144377 None:intergenic
TTGTTTAAGTGCATGTATTC+GGG 0.382758 4_4:-8136396 None:intergenic
CAATATCCTTGGCCAAGATA+TGG 0.382965 4_4:-8143091 None:intergenic
GATCCAGACTGTATAGGAAT+TGG 0.386737 4_4:-8144485 None:intergenic
AGGCAAGGTGTGAATGTAAA+AGG 0.387936 4_4:+8145330 Msa0667640:intron
CTATTACTTGGCAATATCCT+TGG 0.390771 4_4:-8143102 None:intergenic
CGTCCTCCACGTTGCAGATC+CGG 0.395060 4_4:+8145960 Msa0667640:three_prime_UTR
TGTTTGTCCAAAGGGGATTC+GGG 0.400286 4_4:+8144805 Msa0667640:CDS
TCCATTCAAAGTTGTCCAAA+AGG 0.405927 4_4:-8145368 None:intergenic
TGGCTATATGTTTGTCCAAA+GGG 0.410402 4_4:+8144797 Msa0667640:CDS
CATACAGATTCTCCATATCT+TGG 0.418726 4_4:+8143079 Msa0667640:CDS
GTGGTCTCTTTCTCTTTGAA+GGG 0.424614 4_4:-8139176 None:intergenic
TTTATACAGCCGCTAACAAC+AGG 0.426920 4_4:+8144323 Msa0667640:CDS
ATACTCATCTTGTAAGGCCT+GGG 0.427696 4_4:-8143416 None:intergenic
ATCAATGAGCTACTTGCTAA+TGG 0.429019 4_4:+8143265 Msa0667640:CDS
CAGGCCTTACAAGATGAGTA+TGG 0.435383 4_4:+8143418 Msa0667640:CDS
TGATCACATTCCTCATTGCT+TGG 0.435639 4_4:-8136473 None:intergenic
GCATAAATAGAGGCAATAAC+AGG 0.437739 4_4:-8141113 None:intergenic
ATTGTATAAAACCACATATC+AGG 0.437772 4_4:+8144093 Msa0667640:CDS
ACATAAGACACCAAGCTTGC+TGG 0.447607 4_4:-8144353 None:intergenic
AACCACCGGGCAGAGAGCTT+AGG 0.450563 4_4:-8145456 None:intergenic
TTGCCTTTCTTGTTTCGCTC+AGG 0.451091 4_4:+8145873 Msa0667640:three_prime_UTR
ATCATTGATTGAATCTGCAT+TGG 0.451649 4_4:-8145932 None:intergenic
CATACTCATCTTGTAAGGCC+TGG 0.455210 4_4:-8143417 None:intergenic
ATGACAGATAAGAATAAAGA+TGG 0.458312 4_4:+8144675 Msa0667640:intron
GATCACATTCCTCATTGCTT+GGG 0.458892 4_4:-8136472 None:intergenic
CCGCCTGATCCAGACTGTAT+AGG 0.458956 4_4:-8144491 None:intergenic
TAGCAAGTAGCTCATTGATC+AGG 0.461889 4_4:-8143261 None:intergenic
ACACTTTGAATACATCAGAT+TGG 0.462336 4_4:+8144023 Msa0667640:CDS
AATAGGTCCCGAATCCCCTT+TGG 0.465876 4_4:-8144812 None:intergenic
CTTCTTCTTCACCAATAAAG+AGG 0.469041 4_4:+8145684 Msa0667640:three_prime_UTR
ACCATCCAAACATGAAATCA+AGG 0.473106 4_4:-8144207 None:intergenic
CTTCGTGGATATATGCTTCA+AGG 0.473903 4_4:+8143949 Msa0667640:CDS
ACCACCGGGCAGAGAGCTTA+GGG 0.475465 4_4:-8145455 None:intergenic
CTCATTGCTTGGGACTGCCG+TGG 0.476650 4_4:-8136462 None:intergenic
ATCACTCGAAGAGGCGCTCA+TGG 0.478154 4_4:+8145135 Msa0667640:CDS
TCGTCAAGTACGGTGCAATC+AGG 0.479472 4_4:+8139210 Msa0667640:CDS
TTGGAGACAGAGTAAAGCAT+TGG 0.480355 4_4:+8143975 Msa0667640:CDS
AATAAAGATGGGACATACAT+TGG 0.483048 4_4:+8144687 Msa0667640:CDS
ATTCCTATACAGTCTGGATC+AGG 0.483543 4_4:+8144488 Msa0667640:CDS
GCATTGGATTAAACTCTCAC+TGG 0.490284 4_4:+8144134 Msa0667640:CDS
AGCAATCTAAGAGTCTTATT+GGG 0.490733 4_4:+8144402 Msa0667640:CDS
GCCTCCATACTCATCTTGTA+AGG 0.497866 4_4:-8143422 None:intergenic
TTCTTCTTCACCAATAAAGA+GGG 0.499658 4_4:+8145685 Msa0667640:three_prime_UTR
CCATTCAAAGTTGTCCAAAA+GGG 0.499789 4_4:-8145367 None:intergenic
TGGAGACAGAGTAAAGCATT+GGG 0.508305 4_4:+8143976 Msa0667640:CDS
TCTGGATCAGGCGGCGCTGA+CGG 0.508743 4_4:+8144500 Msa0667640:CDS
CAGCTGCATGAGCAAGAAGT+TGG 0.509222 4_4:-8144063 None:intergenic
AGGAATTGGTTTCGTTGCAT+TGG 0.510612 4_4:-8144471 None:intergenic
AAGCAATGAGGAATGTGATC+AGG 0.510938 4_4:+8136475 Msa0667640:exon
AAACCAATTCCTATACAGTC+TGG 0.511299 4_4:+8144482 Msa0667640:CDS
AAAGAGAAAGAGACCACATT+CGG 0.513482 4_4:+8139182 Msa0667640:CDS
AAAACTGTCAGCATAAATAG+AGG 0.520509 4_4:-8141123 None:intergenic
ATATCTATGAAATATAACTA+AGG 0.524017 4_4:-8136438 None:intergenic
AGGAAAGTATCCAGCAAGCT+TGG 0.526086 4_4:+8144343 Msa0667640:CDS
GACAACTTTGAATGGAATGA+CGG 0.527539 4_4:+8145375 Msa0667640:CDS
TGGTCTCTTTCTCTTTGAAG+GGG 0.531186 4_4:-8139175 None:intergenic
GGATACTTTCCTGTTGTTAG+CGG 0.535598 4_4:-8144332 None:intergenic
AGACCTGAGCGAAACAAGAA+AGG 0.536233 4_4:-8145876 None:intergenic
TACTGGCTCCTCCAATTACC+AGG 0.536244 4_4:+8141187 Msa0667640:CDS
GAAGTTGGTTGTGTGTGGCC+TGG 0.537777 4_4:-8144048 None:intergenic
AATATGTGCAGGCTGCAACT+TGG 0.539391 4_4:+8144777 Msa0667640:intron
CAAGAAACTTCCTAAACCAC+CGG 0.545200 4_4:-8145470 None:intergenic
TTGGCTATATGTTTGTCCAA+AGG 0.547740 4_4:+8144796 Msa0667640:CDS
TCATTGCTTGGGACTGCCGT+GGG 0.564374 4_4:-8136461 None:intergenic
GGTCTCTTTCTCTTTGAAGG+GGG 0.568914 4_4:-8139174 None:intergenic
GTATTCAAAGTGTAAGAGAA+TGG 0.570526 4_4:-8144013 None:intergenic
GATTCTCCATATCTTGGCCA+AGG 0.571513 4_4:+8143085 Msa0667640:CDS
GACACCCTAAGCTCTCTGCC+CGG 0.573913 4_4:+8145451 Msa0667640:CDS
CTTGACGATATTTCCGAATG+TGG 0.577303 4_4:-8139195 None:intergenic
TGGGACATACATTGGAGCAT+GGG 0.581493 4_4:+8144695 Msa0667640:CDS
ATGGGACATACATTGGAGCA+TGG 0.582897 4_4:+8144694 Msa0667640:CDS
TGTAAAATATGATTCCTGCT+TGG 0.587277 4_4:-8143234 None:intergenic
TTCGGAAATATCGTCAAGTA+CGG 0.592831 4_4:+8139200 Msa0667640:CDS
GTGTGTTTGTCGTCTTTGTG+TGG 0.592863 4_4:+8145844 Msa0667640:three_prime_UTR
AGCTCACGCAGTATTATTGG+TGG 0.595746 4_4:-8145531 None:intergenic
GAATACATCAGATTGGTACC+AGG 0.597455 4_4:+8144030 Msa0667640:CDS
AAAACGTACCTGGTAATTGG+AGG 0.599628 4_4:-8141195 None:intergenic
TATATTTCATAGATATCCCA+CGG 0.600055 4_4:+8136445 Msa0667640:five_prime_UTR
GATTGCTCTGCAGTGAACGT+TGG 0.602380 4_4:-8144386 None:intergenic
GGCTATATGTTTGTCCAAAG+GGG 0.602874 4_4:+8144798 Msa0667640:CDS
TGACAGATAAGAATAAAGAT+GGG 0.612129 4_4:+8144676 Msa0667640:intron
ATGTAAAAGGATACTTTGCA+TGG 0.622027 4_4:+8145343 Msa0667640:CDS
TCCAACACTATCACTCGAAG+AGG 0.624433 4_4:+8145126 Msa0667640:CDS
AGTGGCGGTGTAAACCAAGC+AGG 0.626808 4_4:+8143220 Msa0667640:CDS
TCTTCTTCACCAATAAAGAG+GGG 0.629116 4_4:+8145686 Msa0667640:three_prime_UTR
CACGGCAGTCCCAAGCAATG+AGG 0.635777 4_4:+8136463 Msa0667640:exon
AGCAAGAAGTTGGTTGTGTG+TGG 0.636210 4_4:-8144053 None:intergenic
CCATCCAAACATGAAATCAA+GGG 0.640294 4_4:-8144206 None:intergenic
TACTCATCTTGTAAGGCCTG+GGG 0.645812 4_4:-8143415 None:intergenic
GCCTCTTCGAGTGATAGTGT+TGG 0.646940 4_4:-8145127 None:intergenic
TGCATTGGCAGCATACATGC+TGG 0.650774 4_4:-8144456 None:intergenic
CCTATACAGTCTGGATCAGG+CGG 0.652705 4_4:+8144491 Msa0667640:CDS
TATGCAGAAGGAAAACTAAG+TGG 0.653344 4_4:+8143202 Msa0667640:intron
AAGAAACTTCCTAAACCACC+GGG 0.661886 4_4:-8145469 None:intergenic
TCTCCGGATCTGCAACGTGG+AGG 0.682726 4_4:-8145963 None:intergenic
ACCCTAAGCTCTCTGCCCGG+TGG 0.683098 4_4:+8145454 Msa0667640:CDS
GCAGAAGGAAAACTAAGTGG+CGG 0.686824 4_4:+8143205 Msa0667640:intron
GCCTTACAAGATGAGTATGG+AGG 0.687554 4_4:+8143421 Msa0667640:CDS
ATGTCTCCGGATCTGCAACG+TGG 0.714078 4_4:-8145966 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATAAAATAATATAAAAA+TGG - chr4_4:8137218-8137237 None:intergenic 0.0%
!!! TATTATTTTCCATTATTTTT+AGG + chr4_4:8137051-8137070 Msa0667640:intron 10.0%
!!! ATTATTTTCCATTATTTTTA+GGG + chr4_4:8137052-8137071 Msa0667640:intron 10.0%
!!! CAAACTTTTTTTTTTTATTA+GGG - chr4_4:8137831-8137850 None:intergenic 10.0%
!!! ACAAACTTTTTTTTTTTATT+AGG - chr4_4:8137832-8137851 None:intergenic 10.0%
!!! ATTGTATTTTTTTTAGTATA+TGG - chr4_4:8138520-8138539 None:intergenic 10.0%
!! TTATAATTTCCAAATAATTT+AGG + chr4_4:8138931-8138950 Msa0667640:intron 10.0%
!!! TAAAGGTTTAATTATTTTTT+AGG - chr4_4:8138959-8138978 None:intergenic 10.0%
!! AAAAAGCAAAAATATATTTA+AGG - chr4_4:8139286-8139305 None:intergenic 10.0%
!!! TTAAATATATTTTTGCTTTT+TGG + chr4_4:8139285-8139304 Msa0667640:intron 10.0%
!! AAATAAAGAAAACAAATAAT+GGG - chr4_4:8139775-8139794 None:intergenic 10.0%
!! CAATTAATTATAGATAAAAT+TGG + chr4_4:8140315-8140334 Msa0667640:intron 10.0%
!! CATTTAAATGAAAAAAAATT+GGG - chr4_4:8140718-8140737 None:intergenic 10.0%
!! ACATTTAAATGAAAAAAAAT+TGG - chr4_4:8140719-8140738 None:intergenic 10.0%
!!! TAAAAATATTTTATTGTTCT+TGG - chr4_4:8141031-8141050 None:intergenic 10.0%
!!! ATTTCTTTAATGTTTATTTT+AGG + chr4_4:8141083-8141102 Msa0667640:intron 10.0%
!!! TTTCTTTAATGTTTATTTTA+GGG + chr4_4:8141084-8141103 Msa0667640:intron 10.0%
!! AAATAGATAAAAAAAATTGA+AGG - chr4_4:8142325-8142344 None:intergenic 10.0%
!!! TTCAATTTTTTTTATCTATT+TGG + chr4_4:8142324-8142343 Msa0667640:intron 10.0%
!!! ATATATTTTTTTTACACTAT+CGG - chr4_4:8142552-8142571 None:intergenic 10.0%
!! AAAAAAGATTTCAAATTATA+CGG - chr4_4:8144290-8144309 None:intergenic 10.0%
!! TTCTAATAAATTTAAATCAT+AGG + chr4_4:8145085-8145104 Msa0667640:intron 10.0%
!!! ATCACTTATTTTATTAAAAA+AGG - chr4_4:8145768-8145787 None:intergenic 10.0%
!! ATATCTATGAAATATAACTA+AGG - chr4_4:8136441-8136460 None:intergenic 15.0%
!!! ATATCAACTCTTTTTAATAT+TGG + chr4_4:8136529-8136548 Msa0667640:intron 15.0%
!!! ATAAAAGTGCTTATTAATTA+CGG - chr4_4:8137378-8137397 None:intergenic 15.0%
!! TGTATTTCAAAAAAGTTTAT+TGG - chr4_4:8137502-8137521 None:intergenic 15.0%
!!! GCTTAAATATATTTTATTTG+TGG - chr4_4:8137737-8137756 None:intergenic 15.0%
!! AAATACTTATCATTTGATTA+TGG + chr4_4:8137769-8137788 Msa0667640:intron 15.0%
!! TACAAAAAAATTGTAGTTTA+GGG - chr4_4:8137863-8137882 None:intergenic 15.0%
!! TTACAAAAAAATTGTAGTTT+AGG - chr4_4:8137864-8137883 None:intergenic 15.0%
!!! ACTACAATTTTTTTGTAATT+AGG + chr4_4:8137866-8137885 Msa0667640:intron 15.0%
!! AAAATTTGGATTTCAAAATA+GGG - chr4_4:8138621-8138640 None:intergenic 15.0%
!! TAAAATTTGGATTTCAAAAT+AGG - chr4_4:8138622-8138641 None:intergenic 15.0%
!! TTGAAAATATATAATACAGT+GGG - chr4_4:8138647-8138666 None:intergenic 15.0%
!! TCCTGAAAAAATATATTATA+GGG - chr4_4:8138678-8138697 None:intergenic 15.0%
!! ATCCTGAAAAAATATATTAT+AGG - chr4_4:8138679-8138698 None:intergenic 15.0%
!!! ATATATTTTTTCAGGATTTT+AGG + chr4_4:8138682-8138701 Msa0667640:intron 15.0%
!!! TATATTTTTTCAGGATTTTA+GGG + chr4_4:8138683-8138702 Msa0667640:intron 15.0%
!!! CAAGAAAAAAAATTAGTTTA+AGG + chr4_4:8138873-8138892 Msa0667640:intron 15.0%
!! TTTCTATATTGTATAACATT+AGG + chr4_4:8139420-8139439 Msa0667640:intron 15.0%
!! AAAATAAAGAAAACAAAGAA+AGG + chr4_4:8139658-8139677 Msa0667640:intron 15.0%
!! AAATAAAGAAAACAAAGAAA+GGG + chr4_4:8139659-8139678 Msa0667640:intron 15.0%
!! CAAATAAAGAAAACAAATAA+TGG - chr4_4:8139776-8139795 None:intergenic 15.0%
!!! CATTATTTGTTTTCTTTATT+TGG + chr4_4:8139774-8139793 Msa0667640:intron 15.0%
!! TCAAAACTAATATATTTGTT+GGG - chr4_4:8140000-8140019 None:intergenic 15.0%
!! TTCAAAACTAATATATTTGT+TGG - chr4_4:8140001-8140020 None:intergenic 15.0%
!!! TATATTAGTTTTGAATTAGT+TGG + chr4_4:8140006-8140025 Msa0667640:intron 15.0%
!! TAAAGTAAAAATTTACTACA+TGG + chr4_4:8140112-8140131 Msa0667640:intron 15.0%
!! ATAGTCATAAACATATTAAA+TGG + chr4_4:8140224-8140243 Msa0667640:intron 15.0%
!! TAGTCATAAACATATTAAAT+GGG + chr4_4:8140225-8140244 Msa0667640:intron 15.0%
!! AATAATCTATTTGTTTACAT+TGG + chr4_4:8140264-8140283 Msa0667640:intron 15.0%
!!! ATTGAATAAATTTTGTTTAG+AGG + chr4_4:8140576-8140595 Msa0667640:intron 15.0%
!!! TAAGGATAAAATACTTTTTT+AGG - chr4_4:8140607-8140626 None:intergenic 15.0%
!! AATAAAAAAAAATACCTTGA+AGG + chr4_4:8140836-8140855 Msa0667640:intron 15.0%
!!! TTCTTTAATGTTTATTTTAG+GGG + chr4_4:8141085-8141104 Msa0667640:intron 15.0%
!!! GGAATTAAACATAATTTTTT+TGG - chr4_4:8141301-8141320 None:intergenic 15.0%
!! AATAAAACTATAATTATCGA+AGG - chr4_4:8142098-8142117 None:intergenic 15.0%
!!! AAATAATTTTAGTGATCAAA+AGG + chr4_4:8142915-8142934 Msa0667640:intron 15.0%
!!! ATTAAACATTTTCTATTACT+TGG - chr4_4:8143117-8143136 None:intergenic 15.0%
!! GTAATAGAAAATGTTTAATT+TGG + chr4_4:8143118-8143137 Msa0667640:intron 15.0%
!! TATGATATACTAATAAAGTA+TGG - chr4_4:8143305-8143324 None:intergenic 15.0%
!! TTCATAATAATACAAATTGA+TGG + chr4_4:8143340-8143359 Msa0667640:intron 15.0%
!! ATTCAAGAAATAATAAATTG+AGG + chr4_4:8143851-8143870 Msa0667640:intron 15.0%
!!! ATATCGACTAATATTTACAA+AGG - chr4_4:8136513-8136532 None:intergenic 20.0%
!! TGTTATTATGTATATAGAGT+TGG + chr4_4:8136596-8136615 Msa0667640:intron 20.0%
!!! TTTGTAAAATCGATTGTTTT+AGG + chr4_4:8136769-8136788 Msa0667640:intron 20.0%
!! TCATTAATTAACCATCAATT+TGG + chr4_4:8136887-8136906 Msa0667640:intron 20.0%
!! TAGTTTAAAAACCAAATTGA+TGG - chr4_4:8136901-8136920 None:intergenic 20.0%
!!! ATCTTTGGATCATTTTTAAA+GGG - chr4_4:8137186-8137205 None:intergenic 20.0%
!!! AAAACAAACGCTAATTTTAA+GGG - chr4_4:8137294-8137313 None:intergenic 20.0%
!!! TAAAACAAACGCTAATTTTA+AGG - chr4_4:8137295-8137314 None:intergenic 20.0%
!!! ATTAATAAGCACTTTTATTG+TGG + chr4_4:8137380-8137399 Msa0667640:intron 20.0%
!!! ATTTATTAACTTTTTTCCTG+AGG + chr4_4:8137548-8137567 Msa0667640:intron 20.0%
!!! ATGGCGTTTAATTATTTTAT+AGG + chr4_4:8137788-8137807 Msa0667640:intron 20.0%
!! ATTAGGGATAAAATATTTCA+AGG - chr4_4:8137815-8137834 None:intergenic 20.0%
!! ATAAGATAGAGATATGATAA+AGG + chr4_4:8137973-8137992 Msa0667640:intron 20.0%
!! TAAGATAGAGATATGATAAA+GGG + chr4_4:8137974-8137993 Msa0667640:intron 20.0%
!! TATATATATCGCATTATTGT+AGG + chr4_4:8138461-8138480 Msa0667640:intron 20.0%
!!! TACTTGAGGATTTTTTAAAT+AGG + chr4_4:8138493-8138512 Msa0667640:intron 20.0%
!! CCAAAAAATATAATAGTTCA+AGG - chr4_4:8138548-8138567 None:intergenic 20.0%
!!! CCTTGAACTATTATATTTTT+TGG + chr4_4:8138545-8138564 Msa0667640:intron 20.0%
!! TGAAAATATATAATACAGTG+GGG - chr4_4:8138646-8138665 None:intergenic 20.0%
!! CTTGAAAATATATAATACAG+TGG - chr4_4:8138648-8138667 None:intergenic 20.0%
!! CTGAAAAAATATATTATAGG+GGG - chr4_4:8138676-8138695 None:intergenic 20.0%
!! CCTGAAAAAATATATTATAG+GGG - chr4_4:8138677-8138696 None:intergenic 20.0%
!!! ATATTTTTTCAGGATTTTAG+GGG + chr4_4:8138684-8138703 Msa0667640:intron 20.0%
!!! CTCACTATTTTATAACTTTT+AGG - chr4_4:8138719-8138738 None:intergenic 20.0%
!! CTAAAAGTTATAAAATAGTG+AGG + chr4_4:8138717-8138736 Msa0667640:intron 20.0%
!!! TAACTCGCTATTTTAAAATT+CGG - chr4_4:8138751-8138770 None:intergenic 20.0%
!!! TTTTAGGTTCCTAAATTATT+TGG - chr4_4:8138943-8138962 None:intergenic 20.0%
!!! AACATCACATGATTTTATTT+AGG - chr4_4:8139048-8139067 None:intergenic 20.0%
!! AAAATAACGTTATAAAGTTG+AGG - chr4_4:8139090-8139109 None:intergenic 20.0%
!!! TTAGGCATTTTAAATAGTTA+TGG - chr4_4:8139133-8139152 None:intergenic 20.0%
!!! ACTATTTAAAATGCCTAATT+TGG + chr4_4:8139135-8139154 Msa0667640:intron 20.0%
!!! TTATTTTTGCCTTTTTAAGA+GGG - chr4_4:8139645-8139664 None:intergenic 20.0%
!!! TTTATTTTTGCCTTTTTAAG+AGG - chr4_4:8139646-8139665 None:intergenic 20.0%
!! AATAAAGAAAACAAAGAAAG+GGG + chr4_4:8139660-8139679 Msa0667640:intron 20.0%
!!! CAAAACTAATATATTTGTTG+GGG - chr4_4:8139999-8140018 None:intergenic 20.0%
!! TAGATTTATTTGTAATTGTC+TGG + chr4_4:8140139-8140158 Msa0667640:intron 20.0%
!! ACACTAACAATTTAAAAAGT+TGG - chr4_4:8140361-8140380 None:intergenic 20.0%
!!! TAAAAAAGTGTTTTTAGTCT+TGG - chr4_4:8140529-8140548 None:intergenic 20.0%
!!! TGTAATACATGTTTTTTCTT+TGG - chr4_4:8141341-8141360 None:intergenic 20.0%
!! TTACATAAAGAGAAATTCTT+AGG + chr4_4:8141356-8141375 Msa0667640:intron 20.0%
!! TTATTTAAGAAATGGAAACT+GGG - chr4_4:8141686-8141705 None:intergenic 20.0%
!! TTTATTTAAGAAATGGAAAC+TGG - chr4_4:8141687-8141706 None:intergenic 20.0%
!!! AATATGTGTCATGTTTTAAT+TGG + chr4_4:8141731-8141750 Msa0667640:intron 20.0%
!! TATTACTTTCTCTAAATTTC+TGG - chr4_4:8141826-8141845 None:intergenic 20.0%
!!! TCTTTTCTTATATTTTAGAC+CGG - chr4_4:8141855-8141874 None:intergenic 20.0%
!! GATGTATCTGATTTATATTA+TGG + chr4_4:8141902-8141921 Msa0667640:intron 20.0%
!! TATTGAATCTTAAGAATTTG+AGG + chr4_4:8141950-8141969 Msa0667640:intron 20.0%
!! AAGGAAAAAAAATATATACC+TGG - chr4_4:8142079-8142098 None:intergenic 20.0%
!! TAAAAAAAATTGAAGGTCTT+GGG - chr4_4:8142318-8142337 None:intergenic 20.0%
!! ATAAAAAAAATTGAAGGTCT+TGG - chr4_4:8142319-8142338 None:intergenic 20.0%
!! TAATTAATCATCTGAAAGTT+TGG - chr4_4:8142425-8142444 None:intergenic 20.0%
!!! ATCATATTTTTCTTCTAATG+TGG + chr4_4:8142727-8142746 Msa0667640:intron 20.0%
!! GAAATTATATATCACATTAG+AGG - chr4_4:8142837-8142856 None:intergenic 20.0%
!!! AACCATTTTTACATCTTAAT+AGG + chr4_4:8143020-8143039 Msa0667640:intron 20.0%
!! TTCCTATTAAGATGTAAAAA+TGG - chr4_4:8143025-8143044 None:intergenic 20.0%
!!! AGAGAAAAATTAGAATGTTT+TGG + chr4_4:8143512-8143531 Msa0667640:intron 20.0%
!!! AATCTTTTTTATCTGTTTAC+AGG + chr4_4:8144300-8144319 Msa0667640:intron 20.0%
!! AAAACAATTTATGTCAAACA+AGG - chr4_4:8144643-8144662 None:intergenic 20.0%
!! TTCTGATTTAAGTAAATAGA+GGG - chr4_4:8145225-8145244 None:intergenic 20.0%
!! ATTCTGATTTAAGTAAATAG+AGG - chr4_4:8145226-8145245 None:intergenic 20.0%
!!! TTGACTATATTGTTGTTTTT+TGG + chr4_4:8145295-8145314 Msa0667640:intron 20.0%
!! CTTGAACATAATAGAATTAT+TGG + chr4_4:8145489-8145508 Msa0667640:CDS 20.0%
! TATATTTCATAGATATCCCA+CGG + chr4_4:8136445-8136464 Msa0667640:five_prime_UTR 25.0%
!! TTGAGTGACATTAATTTTAG+TGG - chr4_4:8136823-8136842 None:intergenic 25.0%
! AATCCAGTATATTCTCAATT+TGG - chr4_4:8137013-8137032 None:intergenic 25.0%
! CATTAAAGATGTGTTTAACA+TGG + chr4_4:8137159-8137178 Msa0667640:intron 25.0%
!!! CATCTTTGGATCATTTTTAA+AGG - chr4_4:8137187-8137206 None:intergenic 25.0%
!! CTTTAAAAATGATCCAAAGA+TGG + chr4_4:8137185-8137204 Msa0667640:intron 25.0%
! AAATGGAAAATTTCCATCTT+TGG - chr4_4:8137201-8137220 None:intergenic 25.0%
!! AAACAAACGCTAATTTTAAG+GGG - chr4_4:8137293-8137312 None:intergenic 25.0%
! TGGATGCTTTAATATCATTT+GGG - chr4_4:8137327-8137346 None:intergenic 25.0%
!! AACGACTTTGAGTTATTAAT+AGG + chr4_4:8137521-8137540 Msa0667640:intron 25.0%
! TAATTCTCCATAATGTTTAC+TGG - chr4_4:8137699-8137718 None:intergenic 25.0%
! ATTATGGAGAATTAGTTGTA+TGG + chr4_4:8137705-8137724 Msa0667640:intron 25.0%
! TTATGGAGAATTAGTTGTAT+GGG + chr4_4:8137706-8137725 Msa0667640:intron 25.0%
!! TATTTTGTCTTACTCTGATA+TGG - chr4_4:8137956-8137975 None:intergenic 25.0%
! TGGATATACATGAAAGAATA+CGG + chr4_4:8138075-8138094 Msa0667640:intron 25.0%
! AGAAGAGAGAATATATGAAA+GGG - chr4_4:8138327-8138346 None:intergenic 25.0%
! TAGAAGAGAGAATATATGAA+AGG - chr4_4:8138328-8138347 None:intergenic 25.0%
! ATTATCTAATTATCTGCAGA+AGG - chr4_4:8138417-8138436 None:intergenic 25.0%
! AAAAATCCTCAAGTAGTTTA+AGG - chr4_4:8138488-8138507 None:intergenic 25.0%
!!! CCCCTATAATATATTTTTTC+AGG + chr4_4:8138674-8138693 Msa0667640:intron 25.0%
! ATTTAGGCACATATATAGAT+GGG - chr4_4:8139032-8139051 None:intergenic 25.0%
! TATTTAGGCACATATATAGA+TGG - chr4_4:8139033-8139052 None:intergenic 25.0%
!!! TGTTGTTTCATTCTTGTTTT+CGG + chr4_4:8139526-8139545 Msa0667640:intron 25.0%
! TTATTAGAACCCTCTTAAAA+AGG + chr4_4:8139633-8139652 Msa0667640:intron 25.0%
! ATAAAGAAAACAAAGAAAGG+GGG + chr4_4:8139661-8139680 Msa0667640:intron 25.0%
!!! AACAAGTTGATAATCCAAAT+CGG - chr4_4:8139731-8139750 None:intergenic 25.0%
!!! TTTATTTGGCCTTTTTAAGA+GGG + chr4_4:8139788-8139807 Msa0667640:intron 25.0%
! TATCCTTAAGTTTACTATGT+TGG + chr4_4:8140619-8140638 Msa0667640:intron 25.0%
! AAACCAACATAGTAAACTTA+AGG - chr4_4:8140625-8140644 None:intergenic 25.0%
! AAATAGAACATTGGAAGAAA+TGG - chr4_4:8140749-8140768 None:intergenic 25.0%
! CGAAAGAAAAAATAGAACAT+TGG - chr4_4:8140758-8140777 None:intergenic 25.0%
! ATTTGAAAAATGAACCTTCA+AGG - chr4_4:8140853-8140872 None:intergenic 25.0%
! ATCTTAGTAATAAGTGATCA+TGG - chr4_4:8140882-8140901 None:intergenic 25.0%
!!! TTTAATGTTTATTTTAGGGG+CGG + chr4_4:8141088-8141107 Msa0667640:intron 25.0%
! AATTCCTAATGCTATAAGAT+TGG + chr4_4:8141315-8141334 Msa0667640:intron 25.0%
!! AAACTTTTCAGTTTTTGCTT+TGG + chr4_4:8141440-8141459 Msa0667640:intron 25.0%
!! AACTTTTCAGTTTTTGCTTT+GGG + chr4_4:8141441-8141460 Msa0667640:intron 25.0%
!! ATTTGAGGTTAATATGTCAA+CGG + chr4_4:8141965-8141984 Msa0667640:intron 25.0%
! AAAATATATACCTGGTGTAT+GGG - chr4_4:8142071-8142090 None:intergenic 25.0%
! AAAAATATATACCTGGTGTA+TGG - chr4_4:8142072-8142091 None:intergenic 25.0%
! TGTAGACTGATTATAATTGA+GGG - chr4_4:8142373-8142392 None:intergenic 25.0%
! ATGTAGACTGATTATAATTG+AGG - chr4_4:8142374-8142393 None:intergenic 25.0%
! AAGATATATAGACAAGTCAT+AGG + chr4_4:8142473-8142492 Msa0667640:intron 25.0%
!! TCTTTTCTTCAATATCTAAC+AGG - chr4_4:8142635-8142654 None:intergenic 25.0%
! TAACTAACTAGTTAGTTAGT+TGG - chr4_4:8143745-8143764 None:intergenic 25.0%
! ATTCTAATGTTAGTTAGTTG+TGG - chr4_4:8143805-8143824 None:intergenic 25.0%
!! AATTTGCAGAGATGATTTTA+AGG + chr4_4:8143925-8143944 Msa0667640:intron 25.0%
! ATTGTATAAAACCACATATC+AGG + chr4_4:8144093-8144112 Msa0667640:CDS 25.0%
!! ATTGGGTCATATGATTTTAT+TGG + chr4_4:8144419-8144438 Msa0667640:CDS 25.0%
!! GTTTGACATAAATTGTTTTC+TGG + chr4_4:8144644-8144663 Msa0667640:intron 25.0%
! ATGACAGATAAGAATAAAGA+TGG + chr4_4:8144675-8144694 Msa0667640:intron 25.0%
! TGACAGATAAGAATAAAGAT+GGG + chr4_4:8144676-8144695 Msa0667640:intron 25.0%
!! TTTTCTTTGTGTACAACAAT+AGG - chr4_4:8144832-8144851 None:intergenic 25.0%
!! TTTTCTGTTATGATAATCGT+AGG - chr4_4:8144866-8144885 None:intergenic 25.0%
! ACGATTATCATAACAGAAAA+TGG + chr4_4:8144866-8144885 Msa0667640:CDS 25.0%
! GTTTATTAGACACTGAAAAA+AGG - chr4_4:8145052-8145071 None:intergenic 25.0%
!! ATTATCTTTTATCTGCAATG+AGG + chr4_4:8145194-8145213 Msa0667640:CDS 25.0%
!!! TTTTTTGGTTTTTTGTGTGA+AGG + chr4_4:8145310-8145329 Msa0667640:intron 25.0%
CTTGTTTAAGTGCATGTATT+CGG - chr4_4:8136400-8136419 None:intergenic 30.0%
! CTCTATTTTATGCTCTTTCT+CGG + chr4_4:8136738-8136757 Msa0667640:intron 30.0%
!! TTAATTTTAGTGGCATAGGT+AGG - chr4_4:8136813-8136832 None:intergenic 30.0%
!! GACATTAATTTTAGTGGCAT+AGG - chr4_4:8136817-8136836 None:intergenic 30.0%
GTCAAGATCAACATGAATTA+AGG - chr4_4:8136853-8136872 None:intergenic 30.0%
GAACCAAATTGAGAATATAC+TGG + chr4_4:8137007-8137026 Msa0667640:intron 30.0%
CTAATATATACCCAAACCAA+CGG - chr4_4:8137266-8137285 None:intergenic 30.0%
ATGCTTTAATATCATTTGGG+AGG - chr4_4:8137324-8137343 None:intergenic 30.0%
GTGGATGCTTTAATATCATT+TGG - chr4_4:8137328-8137347 None:intergenic 30.0%
! TGATATTAAAGCATCCACAA+TGG + chr4_4:8137330-8137349 Msa0667640:intron 30.0%
TATTGTGGAGAGAAAATGTT+TGG + chr4_4:8137395-8137414 Msa0667640:intron 30.0%
!! TGTTTGGTGCTTATAAAGAA+TGG + chr4_4:8137411-8137430 Msa0667640:intron 30.0%
ACGAAAATTAAAGAGAGAGA+GGG - chr4_4:8137451-8137470 None:intergenic 30.0%
!! TCTCTCTCTTTAATTTTCGT+GGG + chr4_4:8137451-8137470 Msa0667640:intron 30.0%
AAAGAGAATGGATAGAAGAT+AGG - chr4_4:8138145-8138164 None:intergenic 30.0%
AAGAGAGAATATATGAAAGG+GGG - chr4_4:8138325-8138344 None:intergenic 30.0%
GAAGAGAGAATATATGAAAG+GGG - chr4_4:8138326-8138345 None:intergenic 30.0%
AATACAGTGGGGTTAAAATT+TGG - chr4_4:8138635-8138654 None:intergenic 30.0%
CTTCATTGAGAAGAATTTGA+AGG - chr4_4:8139400-8139419 None:intergenic 30.0%
TCATCCATAAACATCAAATG+TGG - chr4_4:8139503-8139522 None:intergenic 30.0%
!!! GTTGTTTCATTCTTGTTTTC+GGG + chr4_4:8139527-8139546 Msa0667640:intron 30.0%
!!! TTGTTTCATTCTTGTTTTCG+GGG + chr4_4:8139528-8139547 Msa0667640:intron 30.0%
! AAGAGGGTTCTAATAAAATG+AGG - chr4_4:8139629-8139648 None:intergenic 30.0%
AGTTACAAAAAGCAAACAAG+AGG + chr4_4:8139692-8139711 Msa0667640:intron 30.0%
CAAACAAGAGGATTTCTTTA+GGG + chr4_4:8139704-8139723 Msa0667640:intron 30.0%
!! CTTTATTTGGCCTTTTTAAG+AGG + chr4_4:8139787-8139806 Msa0667640:intron 30.0%
AAACCAAAACCCTCTTAAAA+AGG - chr4_4:8139800-8139819 None:intergenic 30.0%
! TCTATAGTTGTTATTGCGAT+TGG - chr4_4:8140170-8140189 None:intergenic 30.0%
TCTATTTGTTTACATTGGAG+AGG + chr4_4:8140269-8140288 Msa0667640:intron 30.0%
AAAACTGTCAGCATAAATAG+AGG - chr4_4:8141126-8141145 None:intergenic 30.0%
!!! TATGCTTTCGCTTTTTGTAA+CGG + chr4_4:8141268-8141287 Msa0667640:intron 30.0%
!!! AATTTTGATTTCCTCGTAAG+AGG + chr4_4:8141525-8141544 Msa0667640:intron 30.0%
AGATGTAAGAATGATGTGTT+GGG + chr4_4:8141756-8141775 Msa0667640:intron 30.0%
AGAGAAAGTAATACTTCTTC+CGG + chr4_4:8141833-8141852 Msa0667640:intron 30.0%
!! GTGTTGATAATGTAGTATGA+AGG + chr4_4:8141998-8142017 Msa0667640:intron 30.0%
! TTTTCTTCTAATGTGGCAAT+TGG + chr4_4:8142734-8142753 Msa0667640:intron 30.0%
TGATCACTATCATCGTTATA+AGG + chr4_4:8142809-8142828 Msa0667640:intron 30.0%
GTTAGAGTTGTTAATGCATA+TGG - chr4_4:8143179-8143198 None:intergenic 30.0%
AACTCTAACAAATATGCAGA+AGG + chr4_4:8143190-8143209 Msa0667640:intron 30.0%
TGTAAAATATGATTCCTGCT+TGG - chr4_4:8143237-8143256 None:intergenic 30.0%
ATTGATGGAATTATTGATCC+AGG + chr4_4:8143355-8143374 Msa0667640:intron 30.0%
!! ATATGTGACCCTTTTTCATT+GGG + chr4_4:8143387-8143406 Msa0667640:CDS 30.0%
! CTTTAGAGAGAAAACTACAA+AGG + chr4_4:8143586-8143605 Msa0667640:intron 30.0%
AAATCAACTATGTTGTTGGT+TGG - chr4_4:8143780-8143799 None:intergenic 30.0%
GGATAAATCAACTATGTTGT+TGG - chr4_4:8143784-8143803 None:intergenic 30.0%
GATATATGCTTCAAGGAATT+TGG + chr4_4:8143956-8143975 Msa0667640:CDS 30.0%
GTATTCAAAGTGTAAGAGAA+TGG - chr4_4:8144016-8144035 None:intergenic 30.0%
ACACTTTGAATACATCAGAT+TGG + chr4_4:8144023-8144042 Msa0667640:CDS 30.0%
CAAAATGGTATAATAGGCAT+TGG + chr4_4:8144118-8144137 Msa0667640:intron 30.0%
!! AGCAATCTAAGAGTCTTATT+GGG + chr4_4:8144402-8144421 Msa0667640:CDS 30.0%
ACTGTTAATGTGACTTTAAC+AGG + chr4_4:8144542-8144561 Msa0667640:CDS 30.0%
AATAAAGATGGGACATACAT+TGG + chr4_4:8144687-8144706 Msa0667640:CDS 30.0%
AACAACTAAACAATATGTGC+AGG + chr4_4:8144766-8144785 Msa0667640:intron 30.0%
ATGTAAAAGGATACTTTGCA+TGG + chr4_4:8145343-8145362 Msa0667640:CDS 30.0%
TTCTTCTTCACCAATAAAGA+GGG + chr4_4:8145685-8145704 Msa0667640:three_prime_UTR 30.0%
AAGAGAAAAACGAGATACAT+GGG - chr4_4:8145744-8145763 None:intergenic 30.0%
AAAGAGAAAAACGAGATACA+TGG - chr4_4:8145745-8145764 None:intergenic 30.0%
! ATCATTGATTGAATCTGCAT+TGG - chr4_4:8145935-8145954 None:intergenic 30.0%
AAGCAAAATTACTGTAACCG+TGG - chr4_4:8136709-8136728 None:intergenic 35.0%
! ACGGTTACAGTAATTTTGCT+TGG + chr4_4:8136708-8136727 Msa0667640:intron 35.0%
! TTTTATGCTCTTTCTCGGTT+TGG + chr4_4:8136743-8136762 Msa0667640:intron 35.0%
TTTATGCTCTTTCTCGGTTT+GGG + chr4_4:8136744-8136763 Msa0667640:intron 35.0%
!!! AAATCGATTGTTTTAGGACG+TGG + chr4_4:8136775-8136794 Msa0667640:intron 35.0%
!!! AATCGATTGTTTTAGGACGT+GGG + chr4_4:8136776-8136795 Msa0667640:intron 35.0%
CAAACGGACCCTAAAAATAA+TGG - chr4_4:8137063-8137082 None:intergenic 35.0%
!!! CATTATTTTTAGGGTCCGTT+TGG + chr4_4:8137061-8137080 Msa0667640:intron 35.0%
AAAATATGATGATCCACCGT+TGG + chr4_4:8137247-8137266 Msa0667640:intron 35.0%
! TATTAAAGCATCCACAATGG+TGG + chr4_4:8137333-8137352 Msa0667640:intron 35.0%
! TTGGTGCTTATAAAGAATGG+TGG + chr4_4:8137414-8137433 Msa0667640:intron 35.0%
CACGAAAATTAAAGAGAGAG+AGG - chr4_4:8137452-8137471 None:intergenic 35.0%
!! CTCTCTCTCTTTAATTTTCG+TGG + chr4_4:8137450-8137469 Msa0667640:intron 35.0%
!! CTCTCTCTTTAATTTTCGTG+GGG + chr4_4:8137452-8137471 Msa0667640:intron 35.0%
AGATGTGCCAGTAAACATTA+TGG + chr4_4:8137689-8137708 Msa0667640:intron 35.0%
TACGGTGAAAGAGATAAAAG+AGG + chr4_4:8138093-8138112 Msa0667640:intron 35.0%
ACGGTGAAAGAGATAAAAGA+GGG + chr4_4:8138094-8138113 Msa0667640:intron 35.0%
GGAGAGTTGAAAAAAGAGAA+TGG - chr4_4:8138157-8138176 None:intergenic 35.0%
AGAAGAAATATGGTAGAGAG+AGG - chr4_4:8138178-8138197 None:intergenic 35.0%
ACTCAAAGGGAGAAGAAATA+TGG - chr4_4:8138188-8138207 None:intergenic 35.0%
ATATTTCTTCTCCCTTTGAG+TGG + chr4_4:8138187-8138206 Msa0667640:intron 35.0%
TATTTCTTCTCCCTTTGAGT+GGG + chr4_4:8138188-8138207 Msa0667640:intron 35.0%
TTGTTTATCTCCCACTCAAA+GGG - chr4_4:8138201-8138220 None:intergenic 35.0%
AGAGAAGAGATGAAATGAGA+GGG - chr4_4:8138261-8138280 None:intergenic 35.0%
! GAATCAACTTTAGAGAGGAT+GGG - chr4_4:8138292-8138311 None:intergenic 35.0%
! AGAATCAACTTTAGAGAGGA+TGG - chr4_4:8138293-8138312 None:intergenic 35.0%
! AGAGAGAATCAACTTTAGAG+AGG - chr4_4:8138297-8138316 None:intergenic 35.0%
TCTGTTGAAAGCTCCAAATT+AGG - chr4_4:8139151-8139170 None:intergenic 35.0%
AAAGAGAAAGAGACCACATT+CGG + chr4_4:8139182-8139201 Msa0667640:CDS 35.0%
TTCGGAAATATCGTCAAGTA+CGG + chr4_4:8139200-8139219 Msa0667640:CDS 35.0%
TAGACCAAAATTCTCCTCAA+TGG + chr4_4:8139357-8139376 Msa0667640:intron 35.0%
! AACTCCATTGAGGAGAATTT+TGG - chr4_4:8139364-8139383 None:intergenic 35.0%
! TCCTCAATGGAGTTTTCTAA+GGG + chr4_4:8139370-8139389 Msa0667640:intron 35.0%
CATTGAGAAGAATTTGAAGG+TGG - chr4_4:8139397-8139416 None:intergenic 35.0%
TCGACCACATTTGATGTTTA+TGG + chr4_4:8139496-8139515 Msa0667640:intron 35.0%
GTGGACAAAGTAACTAATCA+TGG + chr4_4:8139566-8139585 Msa0667640:intron 35.0%
AGGCAATGAATCCTACAAAA+CGG - chr4_4:8139609-8139628 None:intergenic 35.0%
GCAAACAAGAGGATTTCTTT+AGG + chr4_4:8139703-8139722 Msa0667640:intron 35.0%
CTAAGGACATAATCACTTCA+GGG - chr4_4:8139932-8139951 None:intergenic 35.0%
TGATTATGTCCTTAGCCATA+GGG + chr4_4:8139937-8139956 Msa0667640:intron 35.0%
! TTCGACAACTGAACTTGTTT+GGG - chr4_4:8140077-8140096 None:intergenic 35.0%
! TTTCGACAACTGAACTTGTT+TGG - chr4_4:8140078-8140097 None:intergenic 35.0%
AGCTAGCAAAAAATTTGCAC+AGG - chr4_4:8140681-8140700 None:intergenic 35.0%
GCATAAATAGAGGCAATAAC+AGG - chr4_4:8141116-8141135 None:intergenic 35.0%
!!! CTGACAGTTTTGAGCTAAAT+CGG + chr4_4:8141135-8141154 Msa0667640:CDS 35.0%
!!! TTTCCGGAAGGTTTTGTTTT+TGG + chr4_4:8141164-8141183 Msa0667640:CDS 35.0%
GTACCAAAAACAAAACCTTC+CGG - chr4_4:8141170-8141189 None:intergenic 35.0%
!!! GAAGGTTTTGTTTTTGGTAC+TGG + chr4_4:8141170-8141189 Msa0667640:CDS 35.0%
TACAAAACGTACCTGGTAAT+TGG - chr4_4:8141201-8141220 None:intergenic 35.0%
ACAATGTTACAAAACGTACC+TGG - chr4_4:8141208-8141227 None:intergenic 35.0%
TGTGAATGTTACTATGCATG+TGG + chr4_4:8141225-8141244 Msa0667640:intron 35.0%
TTGGCCAATCTTATAGCATT+AGG - chr4_4:8141322-8141341 None:intergenic 35.0%
AACACTTGGAATAGCAGAAA+GGG + chr4_4:8141554-8141573 Msa0667640:intron 35.0%
! AAGGGCATAAAAGAAGGATT+TGG + chr4_4:8141572-8141591 Msa0667640:intron 35.0%
GTTCATTCTGTCTCTAACAA+TGG - chr4_4:8141634-8141653 None:intergenic 35.0%
CAGATGTAAGAATGATGTGT+TGG + chr4_4:8141755-8141774 Msa0667640:intron 35.0%
! CTATCCACTAACTAGGTTTT+TGG - chr4_4:8142133-8142152 None:intergenic 35.0%
! CAAAAACCTAGTTAGTGGAT+AGG + chr4_4:8142131-8142150 Msa0667640:intron 35.0%
AAATCATGACCACACCTAAT+TGG + chr4_4:8142169-8142188 Msa0667640:intron 35.0%
AGGGTATGAGTAGCTAAATA+GGG - chr4_4:8142354-8142373 None:intergenic 35.0%
AATTGGTGTAACTGCATACA+GGG + chr4_4:8142751-8142770 Msa0667640:intron 35.0%
CATACAGATTCTCCATATCT+TGG + chr4_4:8143079-8143098 Msa0667640:CDS 35.0%
CTATTACTTGGCAATATCCT+TGG - chr4_4:8143105-8143124 None:intergenic 35.0%
TATGCAGAAGGAAAACTAAG+TGG + chr4_4:8143202-8143221 Msa0667640:intron 35.0%
! ATCAATGAGCTACTTGCTAA+TGG + chr4_4:8143265-8143284 Msa0667640:CDS 35.0%
CAATGAAAAAGGGTCACATA+TGG - chr4_4:8143388-8143407 None:intergenic 35.0%
!! CATATGTGACCCTTTTTCAT+TGG + chr4_4:8143386-8143405 Msa0667640:CDS 35.0%
CTAGTTAGTTAGTTGGTTAG+TGG - chr4_4:8143738-8143757 None:intergenic 35.0%
!! AGATGATTTTAAGGACTTCG+TGG + chr4_4:8143934-8143953 Msa0667640:CDS 35.0%
CAGGCTCAAAATGGTATAAT+AGG + chr4_4:8144112-8144131 Msa0667640:intron 35.0%
CCATCCAAACATGAAATCAA+GGG - chr4_4:8144209-8144228 None:intergenic 35.0%
ACCATCCAAACATGAAATCA+AGG - chr4_4:8144210-8144229 None:intergenic 35.0%
! GAAACGGTCAAAAAGTATAG+TGG - chr4_4:8144235-8144254 None:intergenic 35.0%
ATCCATGGTTGTTGTAGAAA+CGG - chr4_4:8144251-8144270 None:intergenic 35.0%
! GAGCAATCTAAGAGTCTTAT+TGG + chr4_4:8144401-8144420 Msa0667640:CDS 35.0%
AAACCAATTCCTATACAGTC+TGG + chr4_4:8144482-8144501 Msa0667640:CDS 35.0%
TTCATTAGGAGTGGTAAGAA+AGG - chr4_4:8144576-8144595 None:intergenic 35.0%
TGATGTATGCCATCTTCATT+AGG - chr4_4:8144590-8144609 None:intergenic 35.0%
TTGGCTATATGTTTGTCCAA+AGG + chr4_4:8144796-8144815 Msa0667640:CDS 35.0%
TGGCTATATGTTTGTCCAAA+GGG + chr4_4:8144797-8144816 Msa0667640:CDS 35.0%
CCATTCAAAGTTGTCCAAAA+GGG - chr4_4:8145370-8145389 None:intergenic 35.0%
TCCATTCAAAGTTGTCCAAA+AGG - chr4_4:8145371-8145390 None:intergenic 35.0%
GACAACTTTGAATGGAATGA+CGG + chr4_4:8145375-8145394 Msa0667640:CDS 35.0%
! AGAAAGTAGAGTTTTGCTGA+CGG - chr4_4:8145663-8145682 None:intergenic 35.0%
CTTCTTCTTCACCAATAAAG+AGG + chr4_4:8145684-8145703 Msa0667640:three_prime_UTR 35.0%
TCTTCTTCACCAATAAAGAG+GGG + chr4_4:8145686-8145705 Msa0667640:three_prime_UTR 35.0%
CTTAAATCACCCCTCTTTAT+TGG - chr4_4:8145698-8145717 None:intergenic 35.0%
CAATAAAGAGGGGTGATTTA+AGG + chr4_4:8145696-8145715 Msa0667640:three_prime_UTR 35.0%
AGAGAAAAACGAGATACATG+GGG - chr4_4:8145743-8145762 None:intergenic 35.0%
GATCACATTCCTCATTGCTT+GGG - chr4_4:8136475-8136494 None:intergenic 40.0%
TGATCACATTCCTCATTGCT+TGG - chr4_4:8136476-8136495 None:intergenic 40.0%
AAGCAATGAGGAATGTGATC+AGG + chr4_4:8136475-8136494 Msa0667640:exon 40.0%
!!! GAGTTGGTGATTTTCATTGC+TGG + chr4_4:8136612-8136631 Msa0667640:intron 40.0%
TTTCAGTTCTTTAGCGACCA+CGG + chr4_4:8136689-8136708 Msa0667640:intron 40.0%
TCCTTATCATGTGCACCAAA+CGG - chr4_4:8137079-8137098 None:intergenic 40.0%
ATATATACCCAAACCAACGG+TGG - chr4_4:8137263-8137282 None:intergenic 40.0%
AAGTGAAACATCCACCATTG+TGG - chr4_4:8137347-8137366 None:intergenic 40.0%
!!! TAACTTTTTTCCTGAGGTGC+TGG + chr4_4:8137554-8137573 Msa0667640:intron 40.0%
!!! AACTTTTTTCCTGAGGTGCT+GGG + chr4_4:8137555-8137574 Msa0667640:intron 40.0%
ATAGATGACGTGTACATGCA+TGG + chr4_4:8137626-8137645 Msa0667640:intron 40.0%
GTCTTACTCTGATATGGTGA+TGG - chr4_4:8137950-8137969 None:intergenic 40.0%
GAGAGAATGAGATGAGATAG+TGG + chr4_4:8138055-8138074 Msa0667640:intron 40.0%
CGGTGAAAGAGATAAAAGAG+GGG + chr4_4:8138095-8138114 Msa0667640:intron 40.0%
ATGGATAGAAGATAGGAGAG+AGG - chr4_4:8138138-8138157 None:intergenic 40.0%
CTTGTTTATCTCCCACTCAA+AGG - chr4_4:8138202-8138221 None:intergenic 40.0%
GAGAGAAGAGATGAAATGAG+AGG - chr4_4:8138262-8138281 None:intergenic 40.0%
GTAGGTCCTTAAACTACTTG+AGG + chr4_4:8138479-8138498 Msa0667640:intron 40.0%
! TGGTCTCTTTCTCTTTGAAG+GGG - chr4_4:8139178-8139197 None:intergenic 40.0%
GTGGTCTCTTTCTCTTTGAA+GGG - chr4_4:8139179-8139198 None:intergenic 40.0%
TGTGGTCTCTTTCTCTTTGA+AGG - chr4_4:8139180-8139199 None:intergenic 40.0%
CTTGACGATATTTCCGAATG+TGG - chr4_4:8139198-8139217 None:intergenic 40.0%
! CTCCTCAATGGAGTTTTCTA+AGG + chr4_4:8139369-8139388 Msa0667640:intron 40.0%
ACCCTTAGAAAACTCCATTG+AGG - chr4_4:8139374-8139393 None:intergenic 40.0%
!!! TCATTCTTGTTTTCGGGGAA+AGG + chr4_4:8139533-8139552 Msa0667640:intron 40.0%
! TGTTCACGATACCGTTTTGT+AGG + chr4_4:8139595-8139614 Msa0667640:intron 40.0%
AAGAAAACAAAGAAAGGGGG+AGG + chr4_4:8139664-8139683 Msa0667640:intron 40.0%
! GATTTCTTTAGGGACCGATT+TGG + chr4_4:8139714-8139733 Msa0667640:intron 40.0%
!! TGGCCTTTTTAAGAGGGTTT+TGG + chr4_4:8139794-8139813 Msa0667640:intron 40.0%
GCTAAGGACATAATCACTTC+AGG - chr4_4:8139933-8139952 None:intergenic 40.0%
GTGATTATGTCCTTAGCCAT+AGG + chr4_4:8139936-8139955 Msa0667640:intron 40.0%
GATTATGTCCTTAGCCATAG+GGG + chr4_4:8139938-8139957 Msa0667640:intron 40.0%
! ATATTTGTTGGGGTAGCCAA+GGG - chr4_4:8139989-8140008 None:intergenic 40.0%
! TATATTTGTTGGGGTAGCCA+AGG - chr4_4:8139990-8140009 None:intergenic 40.0%
! TCGACAACTGAACTTGTTTG+GGG - chr4_4:8140076-8140095 None:intergenic 40.0%
AAGAACTCCTCGATAGAATG+GGG - chr4_4:8140785-8140804 None:intergenic 40.0%
CAAGAACTCCTCGATAGAAT+GGG - chr4_4:8140786-8140805 None:intergenic 40.0%
AAAACGTACCTGGTAATTGG+AGG - chr4_4:8141198-8141217 None:intergenic 40.0%
ACCCAACACATCATTCTTTC+CGG + chr4_4:8141388-8141407 Msa0667640:intron 40.0%
TCCGGAAAGAATGATGTGTT+GGG - chr4_4:8141392-8141411 None:intergenic 40.0%
TTCCGGAAAGAATGATGTGT+TGG - chr4_4:8141393-8141412 None:intergenic 40.0%
AACACATCATTCTTTCCGGA+AGG + chr4_4:8141392-8141411 Msa0667640:intron 40.0%
ACACATCATTCTTTCCGGAA+GGG + chr4_4:8141393-8141412 Msa0667640:intron 40.0%
ATTCACAAGACATACCCTTC+CGG - chr4_4:8141410-8141429 None:intergenic 40.0%
! TTTGATTTCCTCGTAAGAGG+AGG + chr4_4:8141528-8141547 Msa0667640:intron 40.0%
CAACACTTGGAATAGCAGAA+AGG + chr4_4:8141553-8141572 Msa0667640:intron 40.0%
! AGCAGAAAGGGCATAAAAGA+AGG + chr4_4:8141566-8141585 Msa0667640:intron 40.0%
GTTAGAGACAGAATGAACCA+TGG + chr4_4:8141636-8141655 Msa0667640:intron 40.0%
!! GCATTTACTGACTCTCTCTT+TGG - chr4_4:8141662-8141681 None:intergenic 40.0%
GATATATTTGCCCATACACC+AGG + chr4_4:8142058-8142077 Msa0667640:intron 40.0%
CTAGCCAAAAACCTAGTTAG+TGG + chr4_4:8142126-8142145 Msa0667640:intron 40.0%
! CATGATTTGTAAGGCACTTG+TGG - chr4_4:8142157-8142176 None:intergenic 40.0%
! AGGTGTGGTCATGATTTGTA+AGG - chr4_4:8142166-8142185 None:intergenic 40.0%
GTTTGCATGGTGGTTTATCA+TGG + chr4_4:8142232-8142251 Msa0667640:intron 40.0%
GTGGTTTATCATGGTTGTAG+TGG + chr4_4:8142241-8142260 Msa0667640:intron 40.0%
ATGGTTGTAGTGGTGTGATT+TGG + chr4_4:8142251-8142270 Msa0667640:intron 40.0%
! TTGTAGTGGTGTGATTTGGA+CGG + chr4_4:8142255-8142274 Msa0667640:intron 40.0%
! GAGGGTATGAGTAGCTAAAT+AGG - chr4_4:8142355-8142374 None:intergenic 40.0%
CAATTGGTGTAACTGCATAC+AGG + chr4_4:8142750-8142769 Msa0667640:intron 40.0%
CATACAGGGATGGTAATTGA+TGG + chr4_4:8142765-8142784 Msa0667640:intron 40.0%
CAATATCCTTGGCCAAGATA+TGG - chr4_4:8143094-8143113 None:intergenic 40.0%
TAGCAAGTAGCTCATTGATC+AGG - chr4_4:8143264-8143283 None:intergenic 40.0%
GTCACATATGGTATTTGACC+TGG - chr4_4:8143376-8143395 None:intergenic 40.0%
GGGAAGATCCCAATGAAAAA+GGG - chr4_4:8143398-8143417 None:intergenic 40.0%
ATACTCATCTTGTAAGGCCT+GGG - chr4_4:8143419-8143438 None:intergenic 40.0%
!! CTCTCTAAAGTGTGAGTGTA+TGG - chr4_4:8143576-8143595 None:intergenic 40.0%
! CAACTATGTTGTTGGTTGGT+TGG - chr4_4:8143776-8143795 None:intergenic 40.0%
CTTCGTGGATATATGCTTCA+AGG + chr4_4:8143949-8143968 Msa0667640:CDS 40.0%
TTGGAGACAGAGTAAAGCAT+TGG + chr4_4:8143975-8143994 Msa0667640:CDS 40.0%
! TGGAGACAGAGTAAAGCATT+GGG + chr4_4:8143976-8143995 Msa0667640:CDS 40.0%
GAATACATCAGATTGGTACC+AGG + chr4_4:8144030-8144049 Msa0667640:CDS 40.0%
ACCACATATCAGGCTCAAAA+TGG + chr4_4:8144103-8144122 Msa0667640:CDS 40.0%
! ACCATTTTGAGCCTGATATG+TGG - chr4_4:8144107-8144126 None:intergenic 40.0%
GCATTGGATTAAACTCTCAC+TGG + chr4_4:8144134-8144153 Msa0667640:CDS 40.0%
! TCTAATGGGTCAGTTGAGTA+TGG - chr4_4:8144166-8144185 None:intergenic 40.0%
! CGGCAGCTTTTAGATCTAAT+GGG - chr4_4:8144180-8144199 None:intergenic 40.0%
! TCGGCAGCTTTTAGATCTAA+TGG - chr4_4:8144181-8144200 None:intergenic 40.0%
CCCTTGATTTCATGTTTGGA+TGG + chr4_4:8144206-8144225 Msa0667640:intron 40.0%
ACCATGGATCACGACAAAAT+TGG + chr4_4:8144262-8144281 Msa0667640:intron 40.0%
CCATGGATCACGACAAAATT+GGG + chr4_4:8144263-8144282 Msa0667640:intron 40.0%
TTTATACAGCCGCTAACAAC+AGG + chr4_4:8144323-8144342 Msa0667640:CDS 40.0%
GGATACTTTCCTGTTGTTAG+CGG - chr4_4:8144335-8144354 None:intergenic 40.0%
! AGGAATTGGTTTCGTTGCAT+TGG - chr4_4:8144474-8144493 None:intergenic 40.0%
GATCCAGACTGTATAGGAAT+TGG - chr4_4:8144488-8144507 None:intergenic 40.0%
ATTCCTATACAGTCTGGATC+AGG + chr4_4:8144488-8144507 Msa0667640:CDS 40.0%
CTTACCACTCCTAATGAAGA+TGG + chr4_4:8144578-8144597 Msa0667640:intron 40.0%
TATGCCATCTTCATTAGGAG+TGG - chr4_4:8144585-8144604 None:intergenic 40.0%
GGCTATATGTTTGTCCAAAG+GGG + chr4_4:8144798-8144817 Msa0667640:CDS 40.0%
ATGTTTGTCCAAAGGGGATT+CGG + chr4_4:8144804-8144823 Msa0667640:CDS 40.0%
!!! TGGTTTTTTGTGTGAAGGCA+AGG + chr4_4:8145315-8145334 Msa0667640:intron 40.0%
AGGCAAGGTGTGAATGTAAA+AGG + chr4_4:8145330-8145349 Msa0667640:intron 40.0%
! ATACTTTGCATGGTCCCTTT+TGG + chr4_4:8145353-8145372 Msa0667640:CDS 40.0%
! CCCTTTTGGACAACTTTGAA+TGG + chr4_4:8145367-8145386 Msa0667640:CDS 40.0%
AAGAAACTTCCTAAACCACC+GGG - chr4_4:8145472-8145491 None:intergenic 40.0%
CAAGAAACTTCCTAAACCAC+CGG - chr4_4:8145473-8145492 None:intergenic 40.0%
CAAAGCTCACGCAGTATTAT+TGG - chr4_4:8145537-8145556 None:intergenic 40.0%
!!! GATTGTTTTAGGACGTGGGT+TGG + chr4_4:8136780-8136799 Msa0667640:intron 45.0%
!! TCCGTTTGGTGCACATGATA+AGG + chr4_4:8137075-8137094 Msa0667640:intron 45.0%
! ATGATGATCCACCGTTGGTT+TGG + chr4_4:8137252-8137271 Msa0667640:intron 45.0%
!! TGATGATCCACCGTTGGTTT+GGG + chr4_4:8137253-8137272 Msa0667640:intron 45.0%
!! GCAACAGAGCACTCCATTTT+GGG - chr4_4:8137659-8137678 None:intergenic 45.0%
!! TGCAACAGAGCACTCCATTT+TGG - chr4_4:8137660-8137679 None:intergenic 45.0%
! ACTTTAGAGAGGATGGGAGA+GGG - chr4_4:8138286-8138305 None:intergenic 45.0%
! AACTTTAGAGAGGATGGGAG+AGG - chr4_4:8138287-8138306 None:intergenic 45.0%
! GGTCTCTTTCTCTTTGAAGG+GGG - chr4_4:8139177-8139196 None:intergenic 45.0%
!! TTGTTTTCGGGGAAAGGTCA+TGG + chr4_4:8139539-8139558 Msa0667640:intron 45.0%
CCATTCACTCATAAGAGGAG+GGG - chr4_4:8139839-8139858 None:intergenic 45.0%
GCCATTCACTCATAAGAGGA+GGG - chr4_4:8139840-8139859 None:intergenic 45.0%
TGCCATTCACTCATAAGAGG+AGG - chr4_4:8139841-8139860 None:intergenic 45.0%
GTCTGCCATTCACTCATAAG+AGG - chr4_4:8139844-8139863 None:intergenic 45.0%
TATGAGTGAATGGCAGACGA+AGG + chr4_4:8139846-8139865 Msa0667640:intron 45.0%
ATGAGTGAATGGCAGACGAA+GGG + chr4_4:8139847-8139866 Msa0667640:intron 45.0%
GAAGAACATCAGGGTGAAAC+TGG - chr4_4:8139906-8139925 None:intergenic 45.0%
AGGACATAATCACTTCAGGG+CGG - chr4_4:8139929-8139948 None:intergenic 45.0%
GCGTAGCCCTTCATATACAA+GGG + chr4_4:8139960-8139979 Msa0667640:intron 45.0%
CGTAGCCCTTCATATACAAG+GGG + chr4_4:8139961-8139980 Msa0667640:intron 45.0%
GGGTACCCCTTGTATATGAA+GGG - chr4_4:8139969-8139988 None:intergenic 45.0%
! AGGGTACCCCTTGTATATGA+AGG - chr4_4:8139970-8139989 None:intergenic 45.0%
!! TCATATACAAGGGGTACCCT+TGG + chr4_4:8139970-8139989 Msa0667640:intron 45.0%
CCAAGAACTCCTCGATAGAA+TGG - chr4_4:8140787-8140806 None:intergenic 45.0%
CCATTCTATCGAGGAGTTCT+TGG + chr4_4:8140784-8140803 Msa0667640:intron 45.0%
TCTATCGAGGAGTTCTTGGA+TGG + chr4_4:8140788-8140807 Msa0667640:intron 45.0%
! GCTAAATCGGAGCAGTTTTC+CGG + chr4_4:8141148-8141167 Msa0667640:CDS 45.0%
!! GAAGGTGCTGTACATGAAGA+CGG + chr4_4:8142016-8142035 Msa0667640:intron 45.0%
CATGAAGACGGAAGAGGAAT+TGG + chr4_4:8142028-8142047 Msa0667640:intron 45.0%
ACGGAAGAGGAATTGGTACA+TGG + chr4_4:8142035-8142054 Msa0667640:intron 45.0%
CGGAAGAGGAATTGGTACAT+GGG + chr4_4:8142036-8142055 Msa0667640:intron 45.0%
TTGTGGCCTATCCACTAACT+AGG - chr4_4:8142140-8142159 None:intergenic 45.0%
CATGACCACACCTAATTGGT+AGG + chr4_4:8142173-8142192 Msa0667640:intron 45.0%
CACTACCTACCAATTAGGTG+TGG - chr4_4:8142181-8142200 None:intergenic 45.0%
CACACCTAATTGGTAGGTAG+TGG + chr4_4:8142179-8142198 Msa0667640:intron 45.0%
! ACCTAATTGGTAGGTAGTGG+TGG + chr4_4:8142182-8142201 Msa0667640:intron 45.0%
ACCACCACTACCTACCAATT+AGG - chr4_4:8142186-8142205 None:intergenic 45.0%
!! AATGGTGGTGTTGGTTTGCA+TGG + chr4_4:8142219-8142238 Msa0667640:intron 45.0%
GATTCTCCATATCTTGGCCA+AGG + chr4_4:8143085-8143104 Msa0667640:CDS 45.0%
GCAGAAGGAAAACTAAGTGG+CGG + chr4_4:8143205-8143224 Msa0667640:intron 45.0%
GGGGAAGATCCCAATGAAAA+AGG - chr4_4:8143399-8143418 None:intergenic 45.0%
! TTTTCATTGGGATCTTCCCC+AGG + chr4_4:8143399-8143418 Msa0667640:CDS 45.0%
TACTCATCTTGTAAGGCCTG+GGG - chr4_4:8143418-8143437 None:intergenic 45.0%
CATACTCATCTTGTAAGGCC+TGG - chr4_4:8143420-8143439 None:intergenic 45.0%
CAGGCCTTACAAGATGAGTA+TGG + chr4_4:8143418-8143437 Msa0667640:CDS 45.0%
GCCTTACAAGATGAGTATGG+AGG + chr4_4:8143421-8143440 Msa0667640:CDS 45.0%
GCCTCCATACTCATCTTGTA+AGG - chr4_4:8143425-8143444 None:intergenic 45.0%
! AGCAAGAAGTTGGTTGTGTG+TGG - chr4_4:8144056-8144075 None:intergenic 45.0%
!! CATGAAATCAAGGGCGTCTT+CGG - chr4_4:8144200-8144219 None:intergenic 45.0%
GACGCCCTTGATTTCATGTT+TGG + chr4_4:8144202-8144221 Msa0667640:intron 45.0%
GACCGTTTCTACAACAACCA+TGG + chr4_4:8144246-8144265 Msa0667640:intron 45.0%
! CCCAATTTTGTCGTGATCCA+TGG - chr4_4:8144266-8144285 None:intergenic 45.0%
!! AGGAAAGTATCCAGCAAGCT+TGG + chr4_4:8144343-8144362 Msa0667640:CDS 45.0%
ACATAAGACACCAAGCTTGC+TGG - chr4_4:8144356-8144375 None:intergenic 45.0%
! GCAGTGAACGTTGGTAAATC+TGG - chr4_4:8144380-8144399 None:intergenic 45.0%
ATGGGACATACATTGGAGCA+TGG + chr4_4:8144694-8144713 Msa0667640:CDS 45.0%
TGGGACATACATTGGAGCAT+GGG + chr4_4:8144695-8144714 Msa0667640:CDS 45.0%
AATATGTGCAGGCTGCAACT+TGG + chr4_4:8144777-8144796 Msa0667640:intron 45.0%
TGTTTGTCCAAAGGGGATTC+GGG + chr4_4:8144805-8144824 Msa0667640:CDS 45.0%
TCCAACACTATCACTCGAAG+AGG + chr4_4:8145126-8145145 Msa0667640:CDS 45.0%
AGCTCACGCAGTATTATTGG+TGG - chr4_4:8145534-8145553 None:intergenic 45.0%
! CGAGATACATGGGGTGATTT+TGG - chr4_4:8145734-8145753 None:intergenic 45.0%
GTGTGTTTGTCGTCTTTGTG+TGG + chr4_4:8145844-8145863 Msa0667640:three_prime_UTR 45.0%
! TTGCCTTTCTTGTTTCGCTC+AGG + chr4_4:8145873-8145892 Msa0667640:three_prime_UTR 45.0%
AGACCTGAGCGAAACAAGAA+AGG - chr4_4:8145879-8145898 None:intergenic 45.0%
! TTCTTGTTTCGCTCAGGTCT+TGG + chr4_4:8145879-8145898 Msa0667640:three_prime_UTR 45.0%
!! TATTGTAAATAAATAAATAA+AGG - chr4_4:8138976-8138995 None:intergenic 5.0%
!!! TTTATTTTTTTATTTATAGT+TGG + chr4_4:8140653-8140672 Msa0667640:intron 5.0%
!!! TATAATTTTTATTTAAGAAA+TGG - chr4_4:8141694-8141713 None:intergenic 5.0%
!!! AAAATTATTTGATTTTTTTA+AGG - chr4_4:8142905-8142924 None:intergenic 5.0%
!!! TTTTTCCTGAGGTGCTGGGT+TGG + chr4_4:8137559-8137578 Msa0667640:intron 50.0%
! AGCACTCCATTTTGGGCTCT+AGG - chr4_4:8137652-8137671 None:intergenic 50.0%
! ATGGAGTGCTCTGTTGCAGA+TGG + chr4_4:8137662-8137681 Msa0667640:intron 50.0%
AGAAGGAGAGAGCTGAGAGA+GGG - chr4_4:8138400-8138419 None:intergenic 50.0%
! CTCTTTCTCTTTGAAGGGGG+TGG - chr4_4:8139174-8139193 None:intergenic 50.0%
TCGTCAAGTACGGTGCAATC+AGG + chr4_4:8139210-8139229 Msa0667640:CDS 50.0%
TCACTCATAAGAGGAGGGGT+GGG - chr4_4:8139835-8139854 None:intergenic 50.0%
TTCACTCATAAGAGGAGGGG+TGG - chr4_4:8139836-8139855 None:intergenic 50.0%
CCCCTCCTCTTATGAGTGAA+TGG + chr4_4:8139836-8139855 Msa0667640:intron 50.0%
GCAGACGAAGGGAGTTTCTT+GGG + chr4_4:8139858-8139877 Msa0667640:intron 50.0%
CAGACGAAGGGAGTTTCTTG+GGG + chr4_4:8139859-8139878 Msa0667640:intron 50.0%
AGACGAAGGGAGTTTCTTGG+GGG + chr4_4:8139860-8139879 Msa0667640:intron 50.0%
TGAAACTGGACATCCCGACT+AGG - chr4_4:8139892-8139911 None:intergenic 50.0%
GGACATAATCACTTCAGGGC+GGG - chr4_4:8139928-8139947 None:intergenic 50.0%
GGCGTAGCCCTTCATATACA+AGG + chr4_4:8139959-8139978 Msa0667640:intron 50.0%
TCGACAACCCCATTCTATCG+AGG + chr4_4:8140775-8140794 Msa0667640:intron 50.0%
! AATCGGAGCAGTTTTCCGGA+AGG + chr4_4:8141152-8141171 Msa0667640:CDS 50.0%
!! TACTGGCTCCTCCAATTACC+AGG + chr4_4:8141187-8141206 Msa0667640:CDS 50.0%
! GTAAGAGGAGGCACAACACT+TGG + chr4_4:8141540-8141559 Msa0667640:intron 50.0%
! ACTGACTCTCTCTTTGGCCA+TGG - chr4_4:8141656-8141675 None:intergenic 50.0%
GCTGTACATGAAGACGGAAG+AGG + chr4_4:8142022-8142041 Msa0667640:intron 50.0%
ACACCACCATTGAACCACCT+GGG - chr4_4:8142210-8142229 None:intergenic 50.0%
AACACCACCATTGAACCACC+TGG - chr4_4:8142211-8142230 None:intergenic 50.0%
! AGGTGGTTCAATGGTGGTGT+TGG + chr4_4:8142210-8142229 Msa0667640:intron 50.0%
! AACTCTAGTGCCACTCCATG+TGG + chr4_4:8142692-8142711 Msa0667640:intron 50.0%
TGCCACTCCATGTGGCTAAT+GGG + chr4_4:8142700-8142719 Msa0667640:intron 50.0%
GATTCCACCCATTAGCCACA+TGG - chr4_4:8142710-8142729 None:intergenic 50.0%
GGTGTAACTGCATACAGGGA+TGG + chr4_4:8142755-8142774 Msa0667640:intron 50.0%
CAGCTGCATGAGCAAGAAGT+TGG - chr4_4:8144066-8144085 None:intergenic 50.0%
GATTGCTCTGCAGTGAACGT+TGG - chr4_4:8144389-8144408 None:intergenic 50.0%
! TGCATTGGCAGCATACATGC+TGG - chr4_4:8144459-8144478 None:intergenic 50.0%
CCTATACAGTCTGGATCAGG+CGG + chr4_4:8144491-8144510 Msa0667640:CDS 50.0%
AATAGGTCCCGAATCCCCTT+TGG - chr4_4:8144815-8144834 None:intergenic 50.0%
! GCCTCTTCGAGTGATAGTGT+TGG - chr4_4:8145130-8145149 None:intergenic 50.0%
! GACGGATACACTGTGCGTTT+TGG + chr4_4:8145393-8145412 Msa0667640:CDS 50.0%
TCATTGCTTGGGACTGCCGT+GGG - chr4_4:8136464-8136483 None:intergenic 55.0%
!! AGGTGCTGGGTTGGAGAGAT+TGG + chr4_4:8137568-8137587 Msa0667640:intron 55.0%
! GGTGCTGGGTTGGAGAGATT+GGG + chr4_4:8137569-8137588 Msa0667640:intron 55.0%
GCATGGCCTAGAGCCCAAAA+TGG + chr4_4:8137643-8137662 Msa0667640:intron 55.0%
GAAGGAGAGAGCTGAGAGAG+GGG - chr4_4:8138399-8138418 None:intergenic 55.0%
CAGAAGGAGAGAGCTGAGAG+AGG - chr4_4:8138401-8138420 None:intergenic 55.0%
GGGGAAAGGTCATGGTTGTG+TGG + chr4_4:8139547-8139566 Msa0667640:intron 55.0%
ACTCATAAGAGGAGGGGTGG+GGG - chr4_4:8139833-8139852 None:intergenic 55.0%
CACTCATAAGAGGAGGGGTG+GGG - chr4_4:8139834-8139853 None:intergenic 55.0%
GGCAGACGAAGGGAGTTTCT+TGG + chr4_4:8139857-8139876 Msa0667640:intron 55.0%
ACTGGACATCCCGACTAGGT+CGG - chr4_4:8139888-8139907 None:intergenic 55.0%
TCAGGGCGGGAAGAACATCA+GGG - chr4_4:8139915-8139934 None:intergenic 55.0%
TTCAGGGCGGGAAGAACATC+AGG - chr4_4:8139916-8139935 None:intergenic 55.0%
TATGAAGGGCTACGCCCCTA+TGG - chr4_4:8139955-8139974 None:intergenic 55.0%
GTGTTGTGCCTCCTCTTACG+AGG - chr4_4:8141539-8141558 None:intergenic 55.0%
GTGGTTCCCAGGTGGTTCAA+TGG + chr4_4:8142201-8142220 Msa0667640:intron 55.0%
GTTCCCAGGTGGTTCAATGG+TGG + chr4_4:8142204-8142223 Msa0667640:intron 55.0%
!! GGTGGTGTTGGTTTGCATGG+TGG + chr4_4:8142222-8142241 Msa0667640:intron 55.0%
! GTGTGATTTGGACGGTGTCG+TGG + chr4_4:8142263-8142282 Msa0667640:intron 55.0%
!! TGATTTGGACGGTGTCGTGG+TGG + chr4_4:8142266-8142285 Msa0667640:intron 55.0%
! GTGCCACTCCATGTGGCTAA+TGG + chr4_4:8142699-8142718 Msa0667640:intron 55.0%
CACCCATTAGCCACATGGAG+TGG - chr4_4:8142705-8142724 None:intergenic 55.0%
CACTCCATGTGGCTAATGGG+TGG + chr4_4:8142703-8142722 Msa0667640:intron 55.0%
AGTGGCGGTGTAAACCAAGC+AGG + chr4_4:8143220-8143239 Msa0667640:CDS 55.0%
! GAAGTTGGTTGTGTGTGGCC+TGG - chr4_4:8144051-8144070 None:intergenic 55.0%
CCGCCTGATCCAGACTGTAT+AGG - chr4_4:8144494-8144513 None:intergenic 55.0%
!! ATCACTCGAAGAGGCGCTCA+TGG + chr4_4:8145135-8145154 Msa0667640:CDS 55.0%
CTCATTGCTTGGGACTGCCG+TGG - chr4_4:8136465-8136484 None:intergenic 60.0%
CACGGCAGTCCCAAGCAATG+AGG + chr4_4:8136463-8136482 Msa0667640:exon 60.0%
TCTCTCCAACCCAGCACCTC+AGG - chr4_4:8137567-8137586 None:intergenic 60.0%
! GGTAGGTAGTGGTGGTTCCC+AGG + chr4_4:8142190-8142209 Msa0667640:intron 60.0%
! AGGTAGTGGTGGTTCCCAGG+TGG + chr4_4:8142193-8142212 Msa0667640:intron 60.0%
!! CGGTGTCGTGGTGGTAACTC+TGG + chr4_4:8142275-8142294 Msa0667640:intron 60.0%
GACACCCTAAGCTCTCTGCC+CGG + chr4_4:8145451-8145470 Msa0667640:CDS 60.0%
ACCACCGGGCAGAGAGCTTA+GGG - chr4_4:8145458-8145477 None:intergenic 60.0%
AACCACCGGGCAGAGAGCTT+AGG - chr4_4:8145459-8145478 None:intergenic 60.0%
AGCTCTCTGCCCGGTGGTTT+AGG + chr4_4:8145460-8145479 Msa0667640:CDS 60.0%
CATAAGAGGAGGGGTGGGGG+TGG - chr4_4:8139830-8139849 None:intergenic 65.0%
!! CTTGGGGGTGCCGACCTAGT+CGG + chr4_4:8139875-8139894 Msa0667640:intron 65.0%
!! TTGGGGGTGCCGACCTAGTC+GGG + chr4_4:8139876-8139895 Msa0667640:intron 65.0%
GGGCTACGCCCCTATGGCTA+AGG - chr4_4:8139949-8139968 None:intergenic 65.0%
! TCTGGATCAGGCGGCGCTGA+CGG + chr4_4:8144500-8144519 Msa0667640:CDS 65.0%
ACCCTAAGCTCTCTGCCCGG+TGG + chr4_4:8145454-8145473 Msa0667640:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 8136397 8145982 8136397 ID=Msa0667640;Name=Msa0667640
chr4_4 mRNA 8136397 8145982 8136397 ID=Msa0667640-mRNA-1;Parent=Msa0667640;Name=Msa0667640-mRNA-1;_AED=0.15;_eAED=0.15;_QI=83|0.75|0.84|1|0.58|0.69|13|467|456
chr4_4 exon 8136397 8136496 8136397 ID=Msa0667640-mRNA-1:exon:2631;Parent=Msa0667640-mRNA-1
chr4_4 exon 8139170 8139231 8139170 ID=Msa0667640-mRNA-1:exon:2632;Parent=Msa0667640-mRNA-1
chr4_4 exon 8141105 8141208 8141105 ID=Msa0667640-mRNA-1:exon:2633;Parent=Msa0667640-mRNA-1
chr4_4 exon 8143042 8143117 8143042 ID=Msa0667640-mRNA-1:exon:2634;Parent=Msa0667640-mRNA-1
chr4_4 exon 8143209 8143286 8143209 ID=Msa0667640-mRNA-1:exon:2635;Parent=Msa0667640-mRNA-1
chr4_4 exon 8143377 8143464 8143377 ID=Msa0667640-mRNA-1:exon:2636;Parent=Msa0667640-mRNA-1
chr4_4 exon 8143934 8144124 8143934 ID=Msa0667640-mRNA-1:exon:2637;Parent=Msa0667640-mRNA-1
chr4_4 exon 8144134 8144218 8144134 ID=Msa0667640-mRNA-1:exon:2638;Parent=Msa0667640-mRNA-1
chr4_4 exon 8144322 8144563 8144322 ID=Msa0667640-mRNA-1:exon:2639;Parent=Msa0667640-mRNA-1
chr4_4 exon 8144682 8144716 8144682 ID=Msa0667640-mRNA-1:exon:2640;Parent=Msa0667640-mRNA-1
chr4_4 exon 8144788 8144887 8144788 ID=Msa0667640-mRNA-1:exon:2641;Parent=Msa0667640-mRNA-1
chr4_4 exon 8145107 8145215 8145107 ID=Msa0667640-mRNA-1:exon:2642;Parent=Msa0667640-mRNA-1
chr4_4 exon 8145332 8145982 8145332 ID=Msa0667640-mRNA-1:exon:2643;Parent=Msa0667640-mRNA-1
chr4_4 five_prime_UTR 8136397 8136479 8136397 ID=Msa0667640-mRNA-1:five_prime_utr;Parent=Msa0667640-mRNA-1
chr4_4 CDS 8136480 8136496 8136480 ID=Msa0667640-mRNA-1:cds;Parent=Msa0667640-mRNA-1
chr4_4 CDS 8139170 8139231 8139170 ID=Msa0667640-mRNA-1:cds;Parent=Msa0667640-mRNA-1
chr4_4 CDS 8141105 8141208 8141105 ID=Msa0667640-mRNA-1:cds;Parent=Msa0667640-mRNA-1
chr4_4 CDS 8143042 8143117 8143042 ID=Msa0667640-mRNA-1:cds;Parent=Msa0667640-mRNA-1
chr4_4 CDS 8143209 8143286 8143209 ID=Msa0667640-mRNA-1:cds;Parent=Msa0667640-mRNA-1
chr4_4 CDS 8143377 8143464 8143377 ID=Msa0667640-mRNA-1:cds;Parent=Msa0667640-mRNA-1
chr4_4 CDS 8143934 8144124 8143934 ID=Msa0667640-mRNA-1:cds;Parent=Msa0667640-mRNA-1
chr4_4 CDS 8144134 8144218 8144134 ID=Msa0667640-mRNA-1:cds;Parent=Msa0667640-mRNA-1
chr4_4 CDS 8144322 8144563 8144322 ID=Msa0667640-mRNA-1:cds;Parent=Msa0667640-mRNA-1
chr4_4 CDS 8144682 8144716 8144682 ID=Msa0667640-mRNA-1:cds;Parent=Msa0667640-mRNA-1
chr4_4 CDS 8144788 8144887 8144788 ID=Msa0667640-mRNA-1:cds;Parent=Msa0667640-mRNA-1
chr4_4 CDS 8145107 8145215 8145107 ID=Msa0667640-mRNA-1:cds;Parent=Msa0667640-mRNA-1
chr4_4 CDS 8145332 8145515 8145332 ID=Msa0667640-mRNA-1:cds;Parent=Msa0667640-mRNA-1
chr4_4 three_prime_UTR 8145516 8145982 8145516 ID=Msa0667640-mRNA-1:three_prime_utr;Parent=Msa0667640-mRNA-1
Gene Sequence

>Msa0667640

ATGAGGAATGTGATCAGACCACCCCCTTCAAAGAGAAAGAGACCACATTCGGAAATATCGTCAAGTACGGTGCAATCAGGGGCGGAACCTGTTATTGCCTCTATTTATGCTGACAGTTTTGAGCTAAATCGGAGCAGTTTTCCGGAAGGTTTTGTTTTTGGTACTGGCTCCTCCAATTACCAGGAAGATGTTCAAATCATGAAGAATATGAATACAGATGCATACAGATTCTCCATATCTTGGCCAAGGATATTGCCAAAAGGAAAACTAAGTGGCGGTGTAAACCAAGCAGGAATCATATTTTACAACAACCTGATCAATGAGCTACTTGCTAATGGTCAAATACCATATGTGACCCTTTTTCATTGGGATCTTCCCCAGGCCTTACAAGATGAGTATGGAGGCTTTGTCAGCACGAATATTTTAGATGATTTTAAGGACTTCGTGGATATATGCTTCAAGGAATTTGGAGACAGAGTAAAGCATTGGGTTACTTTTAATGAGCCATTCTCTTACACTTTGAATACATCAGATTGGTACCAGGCCACACACAACCAACTTCTTGCTCATGCAGCTGTTTTCGAATTGTATAAAACCACATATCAGGCTCAAAATGGCATTGGATTAAACTCTCACTGGTTTAAACCATACTCAACTGACCCATTAGATCTAAAAGCTGCCGAAGACGCCCTTGATTTCATGTTTATACAGCCGCTAACAACAGGAAAGTATCCAGCAAGCTTGGTGTCTTATGTGCCAGATTTACCAACGTTCACTGCAGAGCAATCTAAGAGTCTTATTGGGTCATATGATTTTATTGGAATCAATTACTACACCAGCATGTATGCTGCCAATGCAACGAAACCAATTCCTATACAGTCTGGATCAGGCGGCGCTGACGGTGTCAATAGTGTTTTCAATACTGTTAATGTGACTTTAACAGATAAGAATAAAGATGGGACATACATTGGAGCATGGGCTGCAACTTGGCTATATGTTTGTCCAAAGGGGATTCGGGACCTATTGTTGTACACAAAGAAAAAGTATAACAATCCTACGATTATCATAACAGAAAATGGTATGAATGAAGTCAATGATCCAACACTATCACTCGAAGAGGCGCTCATGGATACTAACAGAATTGATTACTTTTATCGTCATCTATATTATCTTTTATCTGCAATGAGGCAAGGTGTGAATGTAAAAGGATACTTTGCATGGTCCCTTTTGGACAACTTTGAATGGAATGACGGATACACTGTGCGTTTTGGAATTAACTTTGTTGATTATGACAATGATCTTAGAAGACACCCTAAGCTCTCTGCCCGGTGGTTTAGGAAGTTTCTTGAACATAATAGAATTATTGGTTGA
Protein sequence

>Msa0667640

MRNVIRPPPSKRKRPHSEISSSTVQSGAEPVIASIYADSFELNRSSFPEGFVFGTGSSNYQEDVQIMKNMNTDAYRFSISWPRILPKGKLSGGVNQAGIIFYNNLINELLANGQIPYVTLFHWDLPQALQDEYGGFVSTNILDDFKDFVDICFKEFGDRVKHWVTFNEPFSYTLNTSDWYQATHNQLLAHAAVFELYKTTYQAQNGIGLNSHWFKPYSTDPLDLKAAEDALDFMFIQPLTTGKYPASLVSYVPDLPTFTAEQSKSLIGSYDFIGINYYTSMYAANATKPIPIQSGSGGADGVNSVFNTVNVTLTDKNKDGTYIGAWAATWLYVCPKGIRDLLLYTKKKYNNPTIIITENGMNEVNDPTLSLEEALMDTNRIDYFYRHLYYLLSAMRQGVNVKGYFAWSLLDNFEWNDGYTVRFGINFVDYDNDLRRHPKLSARWFRKFLEHNRIIG*