AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1392270


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1392270 MtrunA17_Chr2g0276881 93.971 763 14 3 4 736 1 761 0.0 1445
Msa1392270 MtrunA17_Chr4g0076971 76.707 747 138 5 21 736 34 775 0.0 1097
Msa1392270 MtrunA17_Chr6g0477391 66.844 754 208 7 16 736 49 793 0.0 969
Msa1392270 MtrunA17_Chr4g0064521 57.930 744 276 5 21 732 16 754 0.0 810
Msa1392270 MtrunA17_Chr7g0225591 52.583 755 314 9 21 736 41 790 0.0 778
Msa1392270 MtrunA17_Chr6g0459451 52.604 768 324 9 3 736 8 769 0.0 771
Msa1392270 MtrunA17_Chr0c12g0493681 74.118 510 120 7 21 525 34 536 0.0 717
Msa1392270 MtrunA17_Chr5g0394301 46.953 722 326 15 46 721 46 756 0.0 580
Msa1392270 MtrunA17_Chr5g0396861 71.667 60 14 1 671 730 57 113 6.84e-21 89.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1392270 AT5G49890.1 73.072 765 161 6 9 736 23 779 0.0 1088
Msa1392270 AT5G33280.1 58.910 752 272 5 17 736 7 753 0.0 867
Msa1392270 AT3G27170.1 52.988 753 312 8 21 736 28 775 0.0 768
Msa1392270 AT5G40890.1 51.779 759 330 7 9 736 17 770 0.0 759
Msa1392270 AT5G40890.2 52.336 642 270 7 126 736 2 638 0.0 645
Msa1392270 AT5G26240.1 47.427 719 324 13 46 721 44 751 0.0 554
Msa1392270 AT5G26240.2 47.427 719 324 13 46 721 44 751 0.0 553

Find 215 sgRNAs with CRISPR-Local

Find 366 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGGCAGGGGATGTTGTTTC+TGG 0.134484 tig0021492:-29813 Msa1392270:CDS
CTCCTCGCAGTTATATTTCT+TGG 0.211442 tig0021492:-30927 Msa1392270:CDS
AGGGATAAGGGTGGAGGATT+TGG 0.218217 tig0021492:-29534 Msa1392270:CDS
GCTTCTTACGGGCGTCTTAT+AGG 0.220379 tig0021492:-30113 Msa1392270:CDS
TGGACCCTTGCACTTCTTAT+TGG 0.235718 tig0021492:-31765 Msa1392270:CDS
CTTCTTATTGGTTTAATTAC+AGG 0.242997 tig0021492:-31753 Msa1392270:CDS
GCTCCTGCAGCTGCTGGCTC+TGG 0.249646 tig0021492:-31564 Msa1392270:CDS
TGAAGTGGTGGACAGATATT+TGG 0.256773 tig0021492:-31380 Msa1392270:intron
TACATTGCTCCTGCAGCTGC+TGG 0.262305 tig0021492:-31570 Msa1392270:CDS
TCTGCATGTGCTTCCATATA+AGG 0.301605 tig0021492:+29855 None:intergenic
TAACCTCCTGTATTCGATTT+GGG 0.302618 tig0021492:-30442 Msa1392270:CDS
TTATTCATGTGGCTACTTGC+GGG 0.305540 tig0021492:+29165 None:intergenic
GTAACCTCCTGTATTCGATT+TGG 0.310912 tig0021492:-30443 Msa1392270:CDS
CATTGATGCACATTCTATAT+TGG 0.317699 tig0021492:-31511 Msa1392270:CDS
ACCAGTATAATCTTGAATAT+TGG 0.317913 tig0021492:+30482 None:intergenic
GAAGTATCTGAGCCATTTCC+AGG 0.320283 tig0021492:+31241 None:intergenic
TTACTTACTCCTGGTTTCTT+AGG 0.328013 tig0021492:+29368 None:intergenic
GAAGCCTGCGGTTGGGGAGC+TGG 0.334474 tig0021492:+30376 None:intergenic
TACTTGCGGGGATTCAAGTT+GGG 0.335456 tig0021492:+29178 None:intergenic
TTCATTCCCGTCATACTTGC+CGG 0.335866 tig0021492:-30137 Msa1392270:CDS
GTTATATTTCTTGGAGTCAT+TGG 0.336790 tig0021492:-30918 Msa1392270:CDS
ATTGTTTCAACAACAGTATA+TGG 0.343669 tig0021492:+29452 None:intergenic
CTTGGAGCCGCATCTTTCCT+TGG 0.354614 tig0021492:-30041 Msa1392270:CDS
ACGGGTTTGTTTGCTCTCCT+TGG 0.355427 tig0021492:-30059 Msa1392270:CDS
ACCTTGACAAAGAGGGTAGA+TGG 0.360767 tig0021492:+31486 None:intergenic
GTTGAAGGGACTACCTTATA+TGG 0.362650 tig0021492:-29868 Msa1392270:CDS
CTTGGAGTTGAGAATATTGC+TGG 0.363001 tig0021492:-31708 Msa1392270:CDS
TACTTGCCGGAGCTTCTTAC+GGG 0.368030 tig0021492:-30124 Msa1392270:CDS
GGGGAGCTGGGACACTCCCC+TGG 0.370301 tig0021492:+30389 None:intergenic
ATGCCAGAGCCAGCAGCTGC+AGG 0.373077 tig0021492:+31561 None:intergenic
GGTTTAATTACAGGACTTGT+TGG 0.379756 tig0021492:-31744 Msa1392270:CDS
CTTCTTACGGGCGTCTTATA+GGG 0.383986 tig0021492:-30112 Msa1392270:CDS
GGAGGCAGATGTGGTCTGTT+TGG 0.388393 tig0021492:-31011 Msa1392270:CDS
ATACTTGCCGGAGCTTCTTA+CGG 0.390348 tig0021492:-30125 Msa1392270:CDS
GCAAAACCAGGTTTGGGAAG+AGG 0.390549 tig0021492:-29554 Msa1392270:CDS
TCGTAATCAAGACTCTGAAT+AGG 0.390749 tig0021492:+34206 None:intergenic
TTTCATGCACGACTATATCT+TGG 0.398252 tig0021492:-29209 Msa1392270:CDS
ACTCTGAATAGGGCAAATAT+TGG 0.400965 tig0021492:+34217 None:intergenic
TCCATTCACAGCTCTGGATA+CGG 0.401365 tig0021492:-30078 Msa1392270:CDS
CACTCGAAGAAGCAGCTTCA+TGG 0.403268 tig0021492:-31124 Msa1392270:CDS
TGAGAATGATCTATTGAAAC+AGG 0.409569 tig0021492:-31838 Msa1392270:CDS
AAGCCTGCGGTTGGGGAGCT+GGG 0.414364 tig0021492:+30377 None:intergenic
CTTATCCCTCTTCCCAAACC+TGG 0.414445 tig0021492:+29548 None:intergenic
TCCAATATTCAAGATTATAC+TGG 0.417742 tig0021492:-30483 Msa1392270:CDS
TACTGTTTCCACGAAGCTAT+AGG 0.418181 tig0021492:+29113 None:intergenic
TCTTATGCAATTCTGTCATC+AGG 0.419705 tig0021492:-31036 Msa1392270:CDS
TTGAGGTATGCTTTCACCTC+TGG 0.425877 tig0021492:+31537 None:intergenic
AGGTCGGGTGTGGTGTAGGC+AGG 0.427469 tig0021492:+30948 None:intergenic
CAGGTTTGGGAAGAGGGATA+AGG 0.427720 tig0021492:-29547 Msa1392270:CDS
GCATGAAATCATGCCTTGTC+AGG 0.431401 tig0021492:+29224 None:intergenic
CGTAATCAAGACTCTGAATA+GGG 0.431994 tig0021492:+34207 None:intergenic
GCGAACAGAACACCACCAAC+GGG 0.432693 tig0021492:+31146 None:intergenic
TGCAGAGGCCTCCAATTGTT+GGG 0.432801 tig0021492:-29249 Msa1392270:intron
TACGGTGTTGCCATTCCCTC+TGG 0.437284 tig0021492:-30164 Msa1392270:CDS
AGGTGGAACCATCGTTGAAT+AGG 0.437290 tig0021492:+30261 None:intergenic
CAAAACCAGGTTTGGGAAGA+GGG 0.444847 tig0021492:-29553 Msa1392270:CDS
AATATAACTGCGAGGAGGTC+GGG 0.446107 tig0021492:+30933 None:intergenic
GTTTAATTACAGGACTTGTT+GGG 0.448390 tig0021492:-31743 Msa1392270:CDS
AGCAGACAAGAGACGATAAT+CGG 0.449779 tig0021492:-34441 Msa1392270:five_prime_UTR
GCCACTAAATTCCTCATGTA+TGG 0.450639 tig0021492:+29831 None:intergenic
GTGCAGAGGCCTCCAATTGT+TGG 0.453486 tig0021492:-29250 Msa1392270:intron
TCAAAGTGTGTGCCATGTCC+AGG 0.453734 tig0021492:-30407 Msa1392270:CDS
AGGTTTGGGAAGAGGGATAA+GGG 0.453961 tig0021492:-29546 Msa1392270:CDS
TCCACTTCAGAACAACATAT+TGG 0.454549 tig0021492:+31784 None:intergenic
AGTTGATGAGCCTCCTTTGA+CGG 0.454792 tig0021492:-29706 Msa1392270:CDS
CTACTTGCGGGGATTCAAGT+TGG 0.455750 tig0021492:+29177 None:intergenic
TATGGAGAAGTATTTGTGAT+TGG 0.458788 tig0021492:+29470 None:intergenic
TATTGAGAAGCCTGCGGTTG+GGG 0.460000 tig0021492:+30370 None:intergenic
TGGAGTCATTGGAGGTCTCA+TGG 0.460194 tig0021492:-30907 Msa1392270:CDS
TGATCAGATTGTGGAGTTGA+AGG 0.461511 tig0021492:-29883 Msa1392270:CDS
GTATTGAGAAGCCTGCGGTT+GGG 0.466094 tig0021492:+30369 None:intergenic
GATAAAGTCCTTCGCACTTA+CGG 0.466861 tig0021492:-30861 Msa1392270:CDS
TTGCTTGAGCATGAGATTGT+TGG 0.466888 tig0021492:+31668 None:intergenic
AATATCGACTCACCTGGAAA+TGG 0.467418 tig0021492:-31253 Msa1392270:CDS
TTCATGCACGACTATATCTT+GGG 0.468911 tig0021492:-29208 Msa1392270:CDS
TTTATTCATGTGGCTACTTG+CGG 0.470591 tig0021492:+29164 None:intergenic
GTTGGGTTCTTTAATAACCT+TGG 0.479221 tig0021492:-31726 Msa1392270:CDS
CTGAGATCATTGTAGTGGTT+TGG 0.481255 tig0021492:+30323 None:intergenic
ACCAATATGTTGTTCTGAAG+TGG 0.487564 tig0021492:-31785 Msa1392270:CDS
TTTGTGGCGATATACTTGCT+TGG 0.487857 tig0021492:-30197 Msa1392270:CDS
ATTACGTGCGGTGCAGCTGC+TGG 0.488782 tig0021492:-31191 Msa1392270:CDS
TATCGACAAGATAATTGTAA+AGG 0.489181 tig0021492:+30880 None:intergenic
CTTGTCAGGATCCCAACAAT+TGG 0.493087 tig0021492:+29238 None:intergenic
AGAAGCTCCGGCAAGTATGA+CGG 0.495770 tig0021492:+30130 None:intergenic
GAGACTTGATAGCTGAAATC+CGG 0.497443 tig0021492:+30229 None:intergenic
GAGGAGGTCGGGTGTGGTGT+AGG 0.498450 tig0021492:+30944 None:intergenic
CCATTCACAGCTCTGGATAC+GGG 0.500003 tig0021492:-30077 Msa1392270:CDS
CATCAGATCCTATAGCTTCG+TGG 0.500885 tig0021492:-29121 None:intergenic
AAAGGAGGCTCATCAACTAC+TGG 0.501049 tig0021492:+29711 None:intergenic
GGAGCCGCATCTTTCCTTGG+TGG 0.504489 tig0021492:-30038 Msa1392270:CDS
GATGGCTCCATTCACAGCTC+TGG 0.504776 tig0021492:-30084 Msa1392270:CDS
ATATTTCTTGGAGTCATTGG+AGG 0.505188 tig0021492:-30915 Msa1392270:CDS
GGACATTTCACAAGAGGAGA+TGG 0.507391 tig0021492:-29513 Msa1392270:CDS
GAAAGGATTGATTAATGCCA+TGG 0.508627 tig0021492:-34357 Msa1392270:exon
GAAGCTCCGGCAAGTATGAC+GGG 0.509879 tig0021492:+30131 None:intergenic
TACATGAGGAATTTAGTGGC+AGG 0.511292 tig0021492:-29828 Msa1392270:CDS
CTGGGACACTCCCCTGGACA+TGG 0.514759 tig0021492:+30395 None:intergenic
AACTGCGAGGAGGTCGGGTG+TGG 0.515931 tig0021492:+30938 None:intergenic
GTTGCGGATGGCATCGTCGT+TGG 0.517368 tig0021492:+30283 None:intergenic
TGCGAACAGAACACCACCAA+CGG 0.518245 tig0021492:+31145 None:intergenic
TAACTTGTTGATGCTACCAT+TGG 0.520536 tig0021492:-29964 Msa1392270:CDS
TGGAAGCCCAAATCGAATAC+AGG 0.520741 tig0021492:+30436 None:intergenic
GCAAATATTGGCTCCAACGA+TGG 0.520937 tig0021492:+34229 None:intergenic
CAACACCAACCCGCACAACT+CGG 0.524524 tig0021492:+29677 None:intergenic
AATGAAGAGTCCAGAGGGAA+TGG 0.524646 tig0021492:+30154 None:intergenic
AACACCAACCCGCACAACTC+GGG 0.524685 tig0021492:+29678 None:intergenic
AAATATAACTGCGAGGAGGT+CGG 0.525416 tig0021492:+30932 None:intergenic
TGTCCCAGCTCCCCAACCGC+AGG 0.526466 tig0021492:-30380 Msa1392270:CDS
CCCGTATCCAGAGCTGTGAA+TGG 0.526772 tig0021492:+30077 None:intergenic
CGGATGCTCCCGAGTTGTGC+GGG 0.526808 tig0021492:-29686 Msa1392270:CDS
TCTTCTCAACTCGCCATCGT+TGG 0.526966 tig0021492:-34242 Msa1392270:CDS
GCTTGCATTGCTAATTTACT+CGG 0.527957 tig0021492:-31293 Msa1392270:CDS
TTTGGGAAGAGGGATAAGGG+TGG 0.528215 tig0021492:-29543 Msa1392270:CDS
GGGAAGAGGGATAAGGGTGG+AGG 0.531741 tig0021492:-29540 Msa1392270:CDS
AGATCATTGTAGTGGTTTGG+TGG 0.533472 tig0021492:+30326 None:intergenic
TATTCATGTGGCTACTTGCG+GGG 0.534257 tig0021492:+29166 None:intergenic
GCCATACATGAGGAATTTAG+TGG 0.536201 tig0021492:-29832 Msa1392270:CDS
TACGATCATCGATCAAAGAA+AGG 0.537082 tig0021492:-34374 Msa1392270:five_prime_UTR
GGCACACACTTTGATAGCAA+TGG 0.537690 tig0021492:+30416 None:intergenic
GATCAGATTGTGGAGTTGAA+GGG 0.538314 tig0021492:-29882 Msa1392270:CDS
GTCAGGATCCCAACAATTGG+AGG 0.542092 tig0021492:+29241 None:intergenic
CCTTGACAAAGAGGGTAGAT+GGG 0.543090 tig0021492:+31487 None:intergenic
AAGAAGCAGCTTCATGGTGG+AGG 0.544267 tig0021492:-31118 Msa1392270:CDS
ATGATCTATTGAAACAGGAC+TGG 0.545905 tig0021492:-31833 Msa1392270:CDS
CTAGTTGTGCCTAAGAAACC+AGG 0.546145 tig0021492:-29377 Msa1392270:CDS
CATGAGGAATTTAGTGGCAG+GGG 0.546458 tig0021492:-29826 Msa1392270:CDS
GAAGGACCCATGGTTCATAC+AGG 0.549790 tig0021492:-31317 Msa1392270:CDS
ACGGATGCTCCCGAGTTGTG+CGG 0.550426 tig0021492:-29687 Msa1392270:CDS
AACTCGGGAGCATCCGTCAA+AGG 0.551479 tig0021492:+29693 None:intergenic
GGAGTCATTGGAGGTCTCAT+GGG 0.552861 tig0021492:-30906 Msa1392270:CDS
TGTGAACAAGGTTAAGGCAA+GGG 0.554225 tig0021492:-29582 Msa1392270:intron
AAATCCGGCGTTAGCAGAGG+TGG 0.554279 tig0021492:+30244 None:intergenic
AACCATCGTTGAATAGGTTG+CGG 0.554720 tig0021492:+30267 None:intergenic
CGCGTAAATATCGACTCACC+TGG 0.554841 tig0021492:-31259 Msa1392270:CDS
GATGTGGTCTGTTTGGAGAA+GGG 0.556580 tig0021492:-31004 Msa1392270:CDS
ATGTGGTCTGTTTGGAGAAG+GGG 0.556647 tig0021492:-31003 Msa1392270:CDS
CCCATCTACCCTCTTTGTCA+AGG 0.557767 tig0021492:-31487 Msa1392270:intron
TGTATTGAGAAGCCTGCGGT+TGG 0.559502 tig0021492:+30368 None:intergenic
AAGACGCCCGTAAGAAGCTC+CGG 0.562668 tig0021492:+30118 None:intergenic
CAAAGTGTGTGCCATGTCCA+GGG 0.563335 tig0021492:-30406 Msa1392270:CDS
GATGCTACCATTGGTCATGT+TGG 0.563949 tig0021492:-29955 Msa1392270:CDS
GGATTTGGACATTTCACAAG+AGG 0.564011 tig0021492:-29519 Msa1392270:CDS
CATCAGGGAGGAGGCAGATG+TGG 0.564378 tig0021492:-31020 Msa1392270:CDS
AGATGTGGTCTGTTTGGAGA+AGG 0.565982 tig0021492:-31005 Msa1392270:CDS
TCTCCTCGTTTCTAAGACAG+TGG 0.567789 tig0021492:-29931 Msa1392270:CDS
CAAGGAAAGATGCGGCTCCA+AGG 0.568106 tig0021492:+30042 None:intergenic
TGCTCCCGAGTTGTGCGGGT+TGG 0.569910 tig0021492:-29682 Msa1392270:intron
ATATATAGTCTTTATTCATG+TGG 0.571536 tig0021492:+29154 None:intergenic
TTAAACCAATAAGAAGTGCA+AGG 0.576883 tig0021492:+31760 None:intergenic
ATTCTGCTTCTGAGAAGTAA+CGG 0.580228 tig0021492:+34272 None:intergenic
CAATTCTGTCATCAGGGAGG+AGG 0.583424 tig0021492:-31029 Msa1392270:CDS
GATTAATGCCATGGACATGA+TGG 0.584376 tig0021492:-34348 Msa1392270:exon
TAGTGACTCCATCATGTCCA+TGG 0.590022 tig0021492:+34340 None:intergenic
ATCGTTGAATAGGTTGCGGA+TGG 0.590388 tig0021492:+30271 None:intergenic
ACATGAGGAATTTAGTGGCA+GGG 0.591059 tig0021492:-29827 Msa1392270:CDS
TTGTGAACAAGGTTAAGGCA+AGG 0.592086 tig0021492:-29583 Msa1392270:intron
TAAACCAATAAGAAGTGCAA+GGG 0.592950 tig0021492:+31761 None:intergenic
TAGAGAAACTGTCATTCTCA+TGG 0.593783 tig0021492:+30013 None:intergenic
AGGTGTTTATGATCAGATTG+TGG 0.595548 tig0021492:-29892 Msa1392270:CDS
CAAGCACCTGTATGAACCAT+GGG 0.595972 tig0021492:+31311 None:intergenic
CAATTGTTGGGATCCTGACA+AGG 0.596275 tig0021492:-29237 Msa1392270:CDS
GCAAGCACCTGTATGAACCA+TGG 0.596508 tig0021492:+31310 None:intergenic
ATCTATTGAAACAGGACTGG+AGG 0.598594 tig0021492:-31830 Msa1392270:CDS
ATTAGAAGTGACAGAACGGA+GGG 0.598601 tig0021492:-34514 None:intergenic
ACTTGCGGGGATTCAAGTTG+GGG 0.599332 tig0021492:+29179 None:intergenic
CAGCAATATTCTCAACTCCA+AGG 0.606942 tig0021492:+31709 None:intergenic
AATTACGTACCTTGACAAAG+AGG 0.607782 tig0021492:+31478 None:intergenic
CTGAAATCCGGCGTTAGCAG+AGG 0.610351 tig0021492:+30241 None:intergenic
GAGAGCTGAGATCATTGTAG+TGG 0.610606 tig0021492:+30318 None:intergenic
ACGGGAATGAAGAGTCCAGA+GGG 0.612848 tig0021492:+30149 None:intergenic
CAGGAGCAATGTAAGCACAC+AGG 0.614796 tig0021492:+31580 None:intergenic
AACAACTGCTACTACTGCAG+TGG 0.616642 tig0021492:+31067 None:intergenic
TGTGGGGAAAGAAGGACCCA+TGG 0.617260 tig0021492:-31327 Msa1392270:CDS
TTGCTTGGAATTGTGACATA+CGG 0.617835 tig0021492:-30182 Msa1392270:CDS
GAGGCATTTGCAGTGTACGT+TGG 0.618257 tig0021492:-31636 Msa1392270:CDS
CTTATGCAATTCTGTCATCA+GGG 0.620544 tig0021492:-31035 Msa1392270:CDS
ATTGCTAATTTACTCGGACA+AGG 0.621738 tig0021492:-31287 Msa1392270:CDS
TTATAGCGCCGTAAGTGCGA+AGG 0.622975 tig0021492:+30853 None:intergenic
AGGAGCAATGTAAGCACACA+GGG 0.624127 tig0021492:+31581 None:intergenic
GGTGGAGGAGTGCTCTTCTG+TGG 0.624513 tig0021492:-31103 Msa1392270:CDS
AACGATGGCGAGTTGAGAAG+AGG 0.626560 tig0021492:+34244 None:intergenic
TCATTCTCATGGTGCCACCA+AGG 0.628418 tig0021492:+30024 None:intergenic
TGCTGGCTCTGGCATACCAG+AGG 0.630169 tig0021492:-31553 Msa1392270:CDS
TGTGGTCTGTTTGGAGAAGG+GGG 0.633017 tig0021492:-31002 Msa1392270:CDS
GATTAGAAGTGACAGAACGG+AGG 0.633144 tig0021492:-34515 None:intergenic
AGGAGGGATTTGATTACGTG+CGG 0.636837 tig0021492:-31203 Msa1392270:CDS
TGGAGTCACTAACAGAGGAA+AGG 0.639982 tig0021492:-34328 Msa1392270:CDS
TCGGGAGCATCCGTCAAAGG+AGG 0.647188 tig0021492:+29696 None:intergenic
ATTACGTACCTTGACAAAGA+GGG 0.651505 tig0021492:+31479 None:intergenic
AGGAGAACCAACATGACCAA+TGG 0.653549 tig0021492:+29948 None:intergenic
GAGGTGAAAGCATACCTCAA+CGG 0.653916 tig0021492:-31534 Msa1392270:CDS
CTTGACAAAGAGGGTAGATG+GGG 0.654562 tig0021492:+31488 None:intergenic
GGACTGGAGGTCAAGAACAA+AGG 0.657057 tig0021492:-31817 Msa1392270:CDS
GCGTCTTATAGGGACTGTGA+TGG 0.661114 tig0021492:-30102 Msa1392270:CDS
AAGGATTAGAAGTGACAGAA+CGG 0.663020 tig0021492:-34518 None:intergenic
CAGCCACTGTCTTAGAAACG+AGG 0.666093 tig0021492:+29928 None:intergenic
GGTTCCACCTCTGCTAACGC+CGG 0.666107 tig0021492:-30248 Msa1392270:CDS
TCGAAGAAGCAGCTTCATGG+TGG 0.672233 tig0021492:-31121 Msa1392270:CDS
GAACAGAACACCACCAACGG+GGG 0.675854 tig0021492:+31148 None:intergenic
GCTAATTTACTCGGACAAGG+TGG 0.678870 tig0021492:-31284 Msa1392270:CDS
GGTGCCACCAAGGAAAGATG+CGG 0.680001 tig0021492:+30034 None:intergenic
ATCCGCAACCTATTCAACGA+TGG 0.680395 tig0021492:-30269 Msa1392270:CDS
AAAGTGTGTGCCATGTCCAG+GGG 0.681077 tig0021492:-30405 Msa1392270:CDS
CATGATGGAGTCACTAACAG+AGG 0.687175 tig0021492:-34333 Msa1392270:CDS
TTGAAAGTGACAGAACATCA+CGG 0.692777 tig0021492:-29738 Msa1392270:CDS
CGAACAGAACACCACCAACG+GGG 0.696103 tig0021492:+31147 None:intergenic
GACGGGAATGAAGAGTCCAG+AGG 0.696782 tig0021492:+30148 None:intergenic
CTCCAAGAAATATAACTGCG+AGG 0.697199 tig0021492:+30925 None:intergenic
AAGCCCAAATCGAATACAGG+AGG 0.700188 tig0021492:+30439 None:intergenic
CACATGCAGAGCCATACATG+AGG 0.706727 tig0021492:-29842 Msa1392270:CDS
AATGTGCATCAATGCCGTTG+AGG 0.707928 tig0021492:+31520 None:intergenic
GCTCAAGCAAAAGTATCACG+AGG 0.735323 tig0021492:-31655 Msa1392270:CDS
CAAGAAATATAACTGCGAGG+AGG 0.742689 tig0021492:+30928 None:intergenic
ATGCAATTCTGTCATCAGGG+AGG 0.743594 tig0021492:-31032 Msa1392270:CDS
GTAGTGTATTGAGAAGCCTG+CGG 0.784310 tig0021492:+30364 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTAAATTATATTTTAA+AGG - tig0021492:30349-30368 Msa1392270:CDS 0.0%
!!! TATTTAAATTATATTTTAAA+GGG - tig0021492:30350-30369 Msa1392270:CDS 0.0%
!! ATATATATATATATATATAT+AGG + tig0021492:32809-32828 None:intergenic 0.0%
!! TCGTATAATAATAATAATAA+TGG + tig0021492:29232-29251 None:intergenic 10.0%
!!! GGATTTTTTTTTAATTAATA+CGG + tig0021492:29590-29609 None:intergenic 10.0%
!!! TAAAAAAAAATCCTAAATTT+TGG - tig0021492:29597-29616 Msa1392270:intron 10.0%
!!! TATAAGTAATTTTTTTTTGT+AGG - tig0021492:30833-30852 Msa1392270:intron 10.0%
!!! ATAAGTAATTTTTTTTTGTA+GGG - tig0021492:30834-30853 Msa1392270:intron 10.0%
!!! AAAATTCATCTTTTAAAATA+GGG + tig0021492:30937-30956 None:intergenic 10.0%
!!! AAAAATTCATCTTTTAAAAT+AGG + tig0021492:30938-30957 None:intergenic 10.0%
!!! CTTTTTTTTTTTTTTTCAAA+AGG - tig0021492:31139-31158 Msa1392270:CDS 10.0%
!!! AATCTTATAAATATTTTCTA+AGG + tig0021492:31226-31245 None:intergenic 10.0%
!!! ATTTTTGCTTAAATTCTTTT+CGG - tig0021492:29561-29580 Msa1392270:CDS 15.0%
!!! TTTTGTTCATGTTTTTTTTT+TGG - tig0021492:29998-30017 Msa1392270:CDS 15.0%
!!! TTTTTAATCCCTATAAAATT+GGG - tig0021492:30382-30401 Msa1392270:CDS 15.0%
!! AAGTAAATACTAAACTTAAA+AGG + tig0021492:30409-30428 None:intergenic 15.0%
!!! TCAAAATTTTAAGAGTTTTA+AGG - tig0021492:30773-30792 Msa1392270:intron 15.0%
!! AAAGCTATTAAAATTAAGTA+AGG - tig0021492:30863-30882 Msa1392270:CDS 15.0%
!! TATAATTGATTAGTATTTGA+AGG - tig0021492:31343-31362 Msa1392270:CDS 15.0%
!! ATAATTGATTAGTATTTGAA+GGG - tig0021492:31344-31363 Msa1392270:CDS 15.0%
!! AATTAAAAATAGTGTAACAA+TGG - tig0021492:31574-31593 Msa1392270:CDS 15.0%
!! GTTTATTTAATTGTGATTAT+TGG - tig0021492:31645-31664 Msa1392270:CDS 15.0%
!!! ATTAAGCTATATGTTAATTT+TGG - tig0021492:31742-31761 Msa1392270:CDS 15.0%
!! ATTAGTTAACTACTATTTAT+TGG + tig0021492:32222-32241 None:intergenic 15.0%
!! AATAAATAGTAGTTAACTAA+TGG - tig0021492:32221-32240 Msa1392270:intron 15.0%
!! ATCAAAATAGATTAACACAA+AGG + tig0021492:29627-29646 None:intergenic 20.0%
!!! TGTGTTAATCTATTTTGATT+TGG - tig0021492:29628-29647 Msa1392270:intron 20.0%
!!! ACTTAATTTGTGAAATTGTT+TGG - tig0021492:29842-29861 Msa1392270:CDS 20.0%
!!! GTTTTTTTTTTGGTTATAAC+TGG - tig0021492:30008-30027 Msa1392270:CDS 20.0%
!!! GTTTTTAATCCCTATAAAAT+TGG - tig0021492:30381-30400 Msa1392270:CDS 20.0%
!! AAACAGATTTGAATTGATTA+GGG + tig0021492:30483-30502 None:intergenic 20.0%
!! TAAACAGATTTGAATTGATT+AGG + tig0021492:30484-30503 None:intergenic 20.0%
!! AGATAAAAAGTAACAAAATC+TGG + tig0021492:30641-30660 None:intergenic 20.0%
!!! TTTTTGGTTCCTATAAAATT+GGG + tig0021492:30905-30924 None:intergenic 20.0%
!!! AATAGGGTTAAATATGTTTT+TGG + tig0021492:30921-30940 None:intergenic 20.0%
!!! TCTTTACTATCTTAACTTTT+TGG + tig0021492:31115-31134 None:intergenic 20.0%
!! ACTCTTAAATGAATCAATTT+CGG + tig0021492:31282-31301 None:intergenic 20.0%
!!! TTTTCTAAAAAAAAATGGGA+GGG - tig0021492:31544-31563 Msa1392270:CDS 20.0%
!!! TAAATAAACACTTTGAAAGT+TGG + tig0021492:31634-31653 None:intergenic 20.0%
!!! ATCTTTTACAATTACTAATC+TGG - tig0021492:32893-32912 Msa1392270:intron 20.0%
!! TAATAACTTAATTGAATTGC+AGG - tig0021492:33115-33134 Msa1392270:intron 20.0%
!!! TCTTTTGCAATATTTATTTG+TGG - tig0021492:34283-34302 Msa1392270:CDS 20.0%
!! ATATATAGTCTTTATTCATG+TGG + tig0021492:34475-34494 None:intergenic 20.0%
!!! CCACGTTAAAATTTGATTTT+GGG + tig0021492:29714-29733 None:intergenic 25.0%
!!! CCAAAATCAAATTTTAACGT+GGG - tig0021492:29712-29731 Msa1392270:CDS 25.0%
! AAGTTAACAACTTTGCTTAA+GGG + tig0021492:29826-29845 None:intergenic 25.0%
! TAAGTTAACAACTTTGCTTA+AGG + tig0021492:29827-29846 None:intergenic 25.0%
! TAAAACTTAGTTTACTCGAT+TGG - tig0021492:29903-29922 Msa1392270:CDS 25.0%
!!! ATATTTGATTTGATATGCTG+TGG - tig0021492:30142-30161 Msa1392270:CDS 25.0%
! TACATATAAAAGATGTAACG+CGG + tig0021492:30181-30200 None:intergenic 25.0%
!! TAAAAGGTCCCAATTTTATA+GGG + tig0021492:30393-30412 None:intergenic 25.0%
!! TTAAAAGGTCCCAATTTTAT+AGG + tig0021492:30394-30413 None:intergenic 25.0%
! AGTGCAGGAAAAAAAAATTA+GGG + tig0021492:30450-30469 None:intergenic 25.0%
!! AATTTTGCGATAATTTTGTG+CGG + tig0021492:30577-30596 None:intergenic 25.0%
!!! TAAACAAACTTTGTTTTAGC+AGG - tig0021492:30801-30820 Msa1392270:intron 25.0%
!!! AAACAAACTTTGTTTTAGCA+GGG - tig0021492:30802-30821 Msa1392270:intron 25.0%
!! TTAGAAGTTCCCAATTTTAT+AGG - tig0021492:30893-30912 Msa1392270:CDS 25.0%
!!! GTTTTTGGTTCCTATAAAAT+TGG + tig0021492:30906-30925 None:intergenic 25.0%
!! GTTCTAATTAACATTTTCGA+AGG + tig0021492:31091-31110 None:intergenic 25.0%
! AGTAGAACATTAAAGTGATA+TGG - tig0021492:31299-31318 Msa1392270:CDS 25.0%
!!! TCGCGTTTTCTAAAAAAAAA+TGG - tig0021492:31539-31558 Msa1392270:CDS 25.0%
!!! CGCGTTTTCTAAAAAAAAAT+GGG - tig0021492:31540-31559 Msa1392270:CDS 25.0%
!!! GTTTTCTAAAAAAAAATGGG+AGG - tig0021492:31543-31562 Msa1392270:CDS 25.0%
!!! TTATTTTGTACATAGCTTCA+AGG - tig0021492:31605-31624 Msa1392270:CDS 25.0%
!! AAGCTATATGTTAATTTTGG+TGG - tig0021492:31745-31764 Msa1392270:CDS 25.0%
!!! CTTCTTATTGGTTTAATTAC+AGG - tig0021492:31873-31892 Msa1392270:intron 25.0%
!! TTGGTTGTAACATGATTTTA+GGG - tig0021492:32009-32028 Msa1392270:intron 25.0%
!!! CTGTTTTTGATTTGAATACA+TGG - tig0021492:32191-32210 Msa1392270:intron 25.0%
! ACTTCAAAAATGATAGAGAT+AGG - tig0021492:32403-32422 Msa1392270:intron 25.0%
! TATCGACAAGATAATTGTAA+AGG + tig0021492:32749-32768 None:intergenic 25.0%
! GTACAAATTGCTATAAATAG+TGG - tig0021492:32984-33003 Msa1392270:intron 25.0%
! TCCAATATTCAAGATTATAC+TGG - tig0021492:33143-33162 Msa1392270:intron 25.0%
! ACCAGTATAATCTTGAATAT+TGG + tig0021492:33147-33166 None:intergenic 25.0%
! ATTGTTTCAACAACAGTATA+TGG + tig0021492:34177-34196 None:intergenic 25.0%
ACAAAGGTTTGCCAAAATTT+AGG + tig0021492:29611-29630 None:intergenic 30.0%
!! CCCAAAATCAAATTTTAACG+TGG - tig0021492:29711-29730 Msa1392270:CDS 30.0%
!! CCCACGTTAAAATTTGATTT+TGG + tig0021492:29715-29734 None:intergenic 30.0%
GCAGCAATTTAAATTGAAAC+AGG + tig0021492:29774-29793 None:intergenic 30.0%
! AGAGATCTTTTATATGCACT+TGG - tig0021492:30216-30235 Msa1392270:CDS 30.0%
CAGTGCAGGAAAAAAAAATT+AGG + tig0021492:30451-30470 None:intergenic 30.0%
AAATTGGGAACTTCTAAGTT+TGG + tig0021492:30890-30909 None:intergenic 30.0%
TTGTCTGAGTATGATATGTA+GGG + tig0021492:31410-31429 None:intergenic 30.0%
! TAATCTCTACTAAGGTGTTT+AGG + tig0021492:31454-31473 None:intergenic 30.0%
!! ATATGTTAATTTTGGTGGCA+TGG - tig0021492:31750-31769 Msa1392270:CDS 30.0%
TGAGAATGATCTATTGAAAC+AGG - tig0021492:31788-31807 Msa1392270:CDS 30.0%
! TAAACCAATAAGAAGTGCAA+GGG + tig0021492:31868-31887 None:intergenic 30.0%
! TTAAACCAATAAGAAGTGCA+AGG + tig0021492:31869-31888 None:intergenic 30.0%
! GTTTAATTACAGGACTTGTT+GGG - tig0021492:31883-31902 Msa1392270:intron 30.0%
! GTTGGTTGTAACATGATTTT+AGG - tig0021492:32008-32027 Msa1392270:intron 30.0%
! TGGTTGTAACATGATTTTAG+GGG - tig0021492:32010-32029 Msa1392270:intron 30.0%
CATTGATGCACATTCTATAT+TGG - tig0021492:32115-32134 Msa1392270:intron 30.0%
!! CAGATATTTGGTTCGATTTT+AGG - tig0021492:32258-32277 Msa1392270:intron 30.0%
TCAAAAATGATAGAGATAGG+AGG - tig0021492:32406-32425 Msa1392270:intron 30.0%
CAAAAATGATAGAGATAGGA+GGG - tig0021492:32407-32426 Msa1392270:intron 30.0%
GTTATATTTCTTGGAGTCAT+TGG - tig0021492:32708-32727 Msa1392270:intron 30.0%
!! AAGTCTCTTAGTTTTCTTTG+TGG - tig0021492:33413-33432 Msa1392270:intron 30.0%
! TTTTTGTGGGATAGAAAAAG+TGG - tig0021492:33848-33867 Msa1392270:intron 30.0%
! TTTTGTGGGATAGAAAAAGT+GGG - tig0021492:33849-33868 Msa1392270:intron 30.0%
TACTATTGTGAACAAGGTTA+AGG - tig0021492:34038-34057 Msa1392270:intron 30.0%
!! TATGGAGAAGTATTTGTGAT+TGG + tig0021492:34159-34178 None:intergenic 30.0%
AAATGTTAAACATTGTGCAG+AGG - tig0021492:34362-34381 Msa1392270:five_prime_UTR 30.0%
TACGATCATCGATCAAAGAA+AGG - tig0021492:29252-29271 Msa1392270:intron 35.0%
GAAAGGATTGATTAATGCCA+TGG - tig0021492:29269-29288 Msa1392270:intron 35.0%
! ATTCTGCTTCTGAGAAGTAA+CGG + tig0021492:29357-29376 None:intergenic 35.0%
ACTCTGAATAGGGCAAATAT+TGG + tig0021492:29412-29431 None:intergenic 35.0%
CGTAATCAAGACTCTGAATA+GGG + tig0021492:29422-29441 None:intergenic 35.0%
TCGTAATCAAGACTCTGAAT+AGG + tig0021492:29423-29442 None:intergenic 35.0%
! CAAGTTTAGAACACTATGAG+AGG + tig0021492:30738-30757 None:intergenic 35.0%
!! TCAATTTCGGTGGACTAATT+TGG - tig0021492:31181-31200 Msa1392270:CDS 35.0%
CTTGTCTGAGTATGATATGT+AGG + tig0021492:31411-31430 None:intergenic 35.0%
CGTTAGACTAATCTCTACTA+AGG + tig0021492:31462-31481 None:intergenic 35.0%
AACGCGATAGTTAGAGAATT+TGG + tig0021492:31526-31545 None:intergenic 35.0%
ATGATCTATTGAAACAGGAC+TGG - tig0021492:31793-31812 Msa1392270:CDS 35.0%
!! ACCAATATGTTGTTCTGAAG+TGG - tig0021492:31841-31860 Msa1392270:CDS 35.0%
TCCACTTCAGAACAACATAT+TGG + tig0021492:31845-31864 None:intergenic 35.0%
GGTTTAATTACAGGACTTGT+TGG - tig0021492:31882-31901 Msa1392270:intron 35.0%
GTTGGGTTCTTTAATAACCT+TGG - tig0021492:31900-31919 Msa1392270:intron 35.0%
!! TGTAACATGATTTTAGGGGT+TGG - tig0021492:32014-32033 Msa1392270:intron 35.0%
ATTACGTACCTTGACAAAGA+GGG + tig0021492:32150-32169 None:intergenic 35.0%
AATTACGTACCTTGACAAAG+AGG + tig0021492:32151-32170 None:intergenic 35.0%
AGTTAACTAATGGCTTGAAG+TGG - tig0021492:32231-32250 Msa1392270:intron 35.0%
GCTTGCATTGCTAATTTACT+CGG - tig0021492:32333-32352 Msa1392270:intron 35.0%
ATTGCTAATTTACTCGGACA+AGG - tig0021492:32339-32358 Msa1392270:intron 35.0%
TCTTATGCAATTCTGTCATC+AGG - tig0021492:32590-32609 Msa1392270:intron 35.0%
CTTATGCAATTCTGTCATCA+GGG - tig0021492:32591-32610 Msa1392270:intron 35.0%
ATATTTCTTGGAGTCATTGG+AGG - tig0021492:32711-32730 Msa1392270:intron 35.0%
AATTAAGAGCTATAGTGCTG+CGG - tig0021492:32917-32936 Msa1392270:intron 35.0%
ATAGCATATCACAGAACAGT+AGG + tig0021492:32957-32976 None:intergenic 35.0%
GCTATAATACTATTGCTGCA+TGG - tig0021492:33017-33036 Msa1392270:intron 35.0%
CTATTGCTGCATGGTAAAAT+TGG - tig0021492:33026-33045 Msa1392270:intron 35.0%
!!! GCAATTGACAACACTGATTT+TGG - tig0021492:33074-33093 Msa1392270:intron 35.0%
ACTTAATTGAATTGCAGGAG+AGG - tig0021492:33120-33139 Msa1392270:intron 35.0%
TAACCTCCTGTATTCGATTT+GGG - tig0021492:33184-33203 Msa1392270:intron 35.0%
TTGCTTGGAATTGTGACATA+CGG - tig0021492:33444-33463 Msa1392270:intron 35.0%
TAGAGAAACTGTCATTCTCA+TGG + tig0021492:33616-33635 None:intergenic 35.0%
!! TAACTTGTTGATGCTACCAT+TGG - tig0021492:33662-33681 Msa1392270:intron 35.0%
!!! GTGGCTGATTGTTTTAACAA+AGG - tig0021492:33714-33733 Msa1392270:intron 35.0%
AGGTGTTTATGATCAGATTG+TGG - tig0021492:33734-33753 Msa1392270:intron 35.0%
! GTCCACTGTTTTCTTTTTGT+GGG - tig0021492:33835-33854 Msa1392270:intron 35.0%
ATCCCACAAAAAGAAAACAG+TGG + tig0021492:33840-33859 None:intergenic 35.0%
TTTGTGGGATAGAAAAAGTG+GGG - tig0021492:33850-33869 Msa1392270:intron 35.0%
TTGAAAGTGACAGAACATCA+CGG - tig0021492:33888-33907 Msa1392270:intron 35.0%
! GATTTTGCAAAACCAGGTTT+GGG - tig0021492:34066-34085 Msa1392270:intron 35.0%
TTACTTACTCCTGGTTTCTT+AGG + tig0021492:34261-34280 None:intergenic 35.0%
CAAAAGAGATTACTTACTCC+TGG + tig0021492:34270-34289 None:intergenic 35.0%
TTTCATGCACGACTATATCT+TGG - tig0021492:34417-34436 Msa1392270:five_prime_UTR 35.0%
TTCATGCACGACTATATCTT+GGG - tig0021492:34418-34437 Msa1392270:five_prime_UTR 35.0%
TTTATTCATGTGGCTACTTG+CGG + tig0021492:34465-34484 None:intergenic 35.0%
AGCAGACAAGAGACGATAAT+CGG - tig0021492:29185-29204 Msa1392270:CDS 40.0%
GATTAATGCCATGGACATGA+TGG - tig0021492:29278-29297 Msa1392270:intron 40.0%
ACTTTGCTTAAGGGACAATC+AGG + tig0021492:29817-29836 None:intergenic 40.0%
AGTTTACTCGATTGGACTTG+CGG - tig0021492:29911-29930 Msa1392270:CDS 40.0%
GTTCTACCCGCTATCAATTT+CGG - tig0021492:31168-31187 Msa1392270:CDS 40.0%
TAGTCCACCGAAATTGATAG+CGG + tig0021492:31178-31197 None:intergenic 40.0%
ATATTCTCTATGACGTCGCT+TGG - tig0021492:31496-31515 Msa1392270:CDS 40.0%
TATTCTCTATGACGTCGCTT+GGG - tig0021492:31497-31516 Msa1392270:CDS 40.0%
ATCTATTGAAACAGGACTGG+AGG - tig0021492:31796-31815 Msa1392270:CDS 40.0%
CAGCAATATTCTCAACTCCA+AGG + tig0021492:31920-31939 None:intergenic 40.0%
CTTGGAGTTGAGAATATTGC+TGG - tig0021492:31918-31937 Msa1392270:intron 40.0%
TTGCTTGAGCATGAGATTGT+TGG + tig0021492:31961-31980 None:intergenic 40.0%
TAACTAATGGCTTGAAGTGG+TGG - tig0021492:32234-32253 Msa1392270:intron 40.0%
!! TGAAGTGGTGGACAGATATT+TGG - tig0021492:32246-32265 Msa1392270:intron 40.0%
!!! AGTTGCTGCTGGTTTTATTG+TGG - tig0021492:32281-32300 Msa1392270:intron 40.0%
!!! GTTGCTGCTGGTTTTATTGT+GGG - tig0021492:32282-32301 Msa1392270:intron 40.0%
!!! TTGCTGCTGGTTTTATTGTG+GGG - tig0021492:32283-32302 Msa1392270:intron 40.0%
!!! GGTTTTATTGTGGGGAAAGA+AGG - tig0021492:32291-32310 Msa1392270:intron 40.0%
!! AATATCGACTCACCTGGAAA+TGG - tig0021492:32373-32392 Msa1392270:intron 40.0%
!! CAGTAGTAGCAGTTGTTTTG+AGG - tig0021492:32565-32584 Msa1392270:intron 40.0%
AAATATAACTGCGAGGAGGT+CGG + tig0021492:32697-32716 None:intergenic 40.0%
CAAGAAATATAACTGCGAGG+AGG + tig0021492:32701-32720 None:intergenic 40.0%
CTCCTCGCAGTTATATTTCT+TGG - tig0021492:32699-32718 Msa1392270:intron 40.0%
CTCCAAGAAATATAACTGCG+AGG + tig0021492:32704-32723 None:intergenic 40.0%
GATAAAGTCCTTCGCACTTA+CGG - tig0021492:32765-32784 Msa1392270:intron 40.0%
GTAACCTCCTGTATTCGATT+TGG - tig0021492:33183-33202 Msa1392270:intron 40.0%
! AGATCATTGTAGTGGTTTGG+TGG + tig0021492:33303-33322 None:intergenic 40.0%
CTGAGATCATTGTAGTGGTT+TGG + tig0021492:33306-33325 None:intergenic 40.0%
AACCATCGTTGAATAGGTTG+CGG + tig0021492:33362-33381 None:intergenic 40.0%
! GAGACTTGATAGCTGAAATC+CGG + tig0021492:33400-33419 None:intergenic 40.0%
TTTGTGGCGATATACTTGCT+TGG - tig0021492:33429-33448 Msa1392270:intron 40.0%
TGATCAGATTGTGGAGTTGA+AGG - tig0021492:33743-33762 Msa1392270:intron 40.0%
GATCAGATTGTGGAGTTGAA+GGG - tig0021492:33744-33763 Msa1392270:intron 40.0%
GTTGAAGGGACTACCTTATA+TGG - tig0021492:33758-33777 Msa1392270:intron 40.0%
TCTGCATGTGCTTCCATATA+AGG + tig0021492:33774-33793 None:intergenic 40.0%
GCCATACATGAGGAATTTAG+TGG - tig0021492:33794-33813 Msa1392270:intron 40.0%
GCCACTAAATTCCTCATGTA+TGG + tig0021492:33798-33817 None:intergenic 40.0%
TACATGAGGAATTTAGTGGC+AGG - tig0021492:33798-33817 Msa1392270:intron 40.0%
ACATGAGGAATTTAGTGGCA+GGG - tig0021492:33799-33818 Msa1392270:intron 40.0%
! GGTCCACTGTTTTCTTTTTG+TGG - tig0021492:33834-33853 Msa1392270:intron 40.0%
AGCACAAGACATTGTTCACT+AGG - tig0021492:33995-34014 Msa1392270:intron 40.0%
GCACAAGACATTGTTCACTA+GGG - tig0021492:33996-34015 Msa1392270:intron 40.0%
AGGGTCTACTATTGTGAACA+AGG - tig0021492:34032-34051 Msa1392270:intron 40.0%
TTGTGAACAAGGTTAAGGCA+AGG - tig0021492:34043-34062 Msa1392270:intron 40.0%
TGTGAACAAGGTTAAGGCAA+GGG - tig0021492:34044-34063 Msa1392270:intron 40.0%
! GGATTTTGCAAAACCAGGTT+TGG - tig0021492:34065-34084 Msa1392270:intron 40.0%
GGATTTGGACATTTCACAAG+AGG - tig0021492:34107-34126 Msa1392270:intron 40.0%
! CAAAAGCCGCTCTTCTTTTT+CGG - tig0021492:34205-34224 Msa1392270:intron 40.0%
! AAAAGCCGCTCTTCTTTTTC+GGG - tig0021492:34206-34225 Msa1392270:CDS 40.0%
TTATTCATGTGGCTACTTGC+GGG + tig0021492:34464-34483 None:intergenic 40.0%
TAGTGACTCCATCATGTCCA+TGG + tig0021492:29289-29308 None:intergenic 45.0%
! CATGATGGAGTCACTAACAG+AGG - tig0021492:29293-29312 Msa1392270:intron 45.0%
TGGAGTCACTAACAGAGGAA+AGG - tig0021492:29298-29317 Msa1392270:intron 45.0%
!! GCAAATATTGGCTCCAACGA+TGG + tig0021492:29400-29419 None:intergenic 45.0%
AGTCTACGAGTCACTTAGCT+CGG + tig0021492:29872-29891 None:intergenic 45.0%
!!! TGTGTGCGTTTTTGGCTACT+AGG - tig0021492:30239-30258 Msa1392270:CDS 45.0%
TAGGGACTAATACTCAGTGC+AGG + tig0021492:30465-30484 None:intergenic 45.0%
! AGTCCACCGAAATTGATAGC+GGG + tig0021492:31177-31196 None:intergenic 45.0%
ATTCTCTATGACGTCGCTTG+GGG - tig0021492:31498-31517 Msa1392270:CDS 45.0%
! TTTGGTGGCATGGATTATGC+AGG - tig0021492:31760-31779 Msa1392270:CDS 45.0%
TGGACCCTTGCACTTCTTAT+TGG - tig0021492:31861-31880 Msa1392270:intron 45.0%
!! GCTCAAGCAAAAGTATCACG+AGG - tig0021492:31971-31990 Msa1392270:intron 45.0%
AGGAGCAATGTAAGCACACA+GGG + tig0021492:32048-32067 None:intergenic 45.0%
TTGAGGTATGCTTTCACCTC+TGG + tig0021492:32092-32111 None:intergenic 45.0%
! GAGGTGAAAGCATACCTCAA+CGG - tig0021492:32092-32111 Msa1392270:intron 45.0%
AATGTGCATCAATGCCGTTG+AGG + tig0021492:32109-32128 None:intergenic 45.0%
CTTGACAAAGAGGGTAGATG+GGG + tig0021492:32141-32160 None:intergenic 45.0%
CCTTGACAAAGAGGGTAGAT+GGG + tig0021492:32142-32161 None:intergenic 45.0%
ACCTTGACAAAGAGGGTAGA+TGG + tig0021492:32143-32162 None:intergenic 45.0%
!! TCGATTTTAGGAGTTGCTGC+TGG - tig0021492:32270-32289 Msa1392270:intron 45.0%
CAAGCACCTGTATGAACCAT+GGG + tig0021492:32318-32337 None:intergenic 45.0%
GCTAATTTACTCGGACAAGG+TGG - tig0021492:32342-32361 Msa1392270:intron 45.0%
! GAAGTATCTGAGCCATTTCC+AGG + tig0021492:32388-32407 None:intergenic 45.0%
AGGAGGGATTTGATTACGTG+CGG - tig0021492:32423-32442 Msa1392270:intron 45.0%
AACAACTGCTACTACTGCAG+TGG + tig0021492:32562-32581 None:intergenic 45.0%
ATGCAATTCTGTCATCAGGG+AGG - tig0021492:32594-32613 Msa1392270:intron 45.0%
AGATGTGGTCTGTTTGGAGA+AGG - tig0021492:32621-32640 Msa1392270:intron 45.0%
GATGTGGTCTGTTTGGAGAA+GGG - tig0021492:32622-32641 Msa1392270:intron 45.0%
ATGTGGTCTGTTTGGAGAAG+GGG - tig0021492:32623-32642 Msa1392270:intron 45.0%
AATATAACTGCGAGGAGGTC+GGG + tig0021492:32696-32715 None:intergenic 45.0%
AAGCCCAAATCGAATACAGG+AGG + tig0021492:33190-33209 None:intergenic 45.0%
TGGAAGCCCAAATCGAATAC+AGG + tig0021492:33193-33212 None:intergenic 45.0%
! GGCACACACTTTGATAGCAA+TGG + tig0021492:33213-33232 None:intergenic 45.0%
GTAGTGTATTGAGAAGCCTG+CGG + tig0021492:33265-33284 None:intergenic 45.0%
GAGAGCTGAGATCATTGTAG+TGG + tig0021492:33311-33330 None:intergenic 45.0%
ATCGTTGAATAGGTTGCGGA+TGG + tig0021492:33358-33377 None:intergenic 45.0%
ATCCGCAACCTATTCAACGA+TGG - tig0021492:33357-33376 Msa1392270:intron 45.0%
AGGTGGAACCATCGTTGAAT+AGG + tig0021492:33368-33387 None:intergenic 45.0%
AATGAAGAGTCCAGAGGGAA+TGG + tig0021492:33475-33494 None:intergenic 45.0%
TTCATTCCCGTCATACTTGC+CGG - tig0021492:33489-33508 Msa1392270:intron 45.0%
ATACTTGCCGGAGCTTCTTA+CGG - tig0021492:33501-33520 Msa1392270:intron 45.0%
CTTCTTACGGGCGTCTTATA+GGG - tig0021492:33514-33533 Msa1392270:intron 45.0%
!! TCCATTCACAGCTCTGGATA+CGG - tig0021492:33548-33567 Msa1392270:intron 45.0%
GATGCTACCATTGGTCATGT+TGG - tig0021492:33671-33690 Msa1392270:intron 45.0%
AGGAGAACCAACATGACCAA+TGG + tig0021492:33681-33700 None:intergenic 45.0%
!! TCTCCTCGTTTCTAAGACAG+TGG - tig0021492:33695-33714 Msa1392270:intron 45.0%
CATGAGGAATTTAGTGGCAG+GGG - tig0021492:33800-33819 Msa1392270:intron 45.0%
AAAGGAGGCTCATCAACTAC+TGG + tig0021492:33918-33937 None:intergenic 45.0%
!! AGTTGATGAGCCTCCTTTGA+CGG - tig0021492:33920-33939 Msa1392270:intron 45.0%
!! GGTGTTGAGGTCTCATCTTT+TGG - tig0021492:33965-33984 Msa1392270:intron 45.0%
AGACATTGTTCACTAGGGAG+AGG - tig0021492:34001-34020 Msa1392270:intron 45.0%
GACATTGTTCACTAGGGAGA+GGG - tig0021492:34002-34021 Msa1392270:intron 45.0%
! GCAAGGGATTTTGCAAAACC+AGG - tig0021492:34060-34079 Msa1392270:intron 45.0%
CAAAACCAGGTTTGGGAAGA+GGG - tig0021492:34073-34092 Msa1392270:intron 45.0%
AGGTTTGGGAAGAGGGATAA+GGG - tig0021492:34080-34099 Msa1392270:intron 45.0%
GGACATTTCACAAGAGGAGA+TGG - tig0021492:34113-34132 Msa1392270:intron 45.0%
AAGCTCCCGAAAAAGAAGAG+CGG + tig0021492:34214-34233 None:intergenic 45.0%
CTAGTTGTGCCTAAGAAACC+AGG - tig0021492:34249-34268 Msa1392270:CDS 45.0%
CTTGTCAGGATCCCAACAAT+TGG + tig0021492:34391-34410 None:intergenic 45.0%
CAATTGTTGGGATCCTGACA+AGG - tig0021492:34389-34408 Msa1392270:five_prime_UTR 45.0%
GCATGAAATCATGCCTTGTC+AGG + tig0021492:34405-34424 None:intergenic 45.0%
! TACTTGCGGGGATTCAAGTT+GGG + tig0021492:34451-34470 None:intergenic 45.0%
TATTCATGTGGCTACTTGCG+GGG + tig0021492:34463-34482 None:intergenic 45.0%
!! AATATTAGTTATAATAATAA+AGG + tig0021492:34339-34358 None:intergenic 5.0%
AGAGAGAGAGAGAGGATCGA+AGG - tig0021492:29158-29177 Msa1392270:exon 50.0%
! AACGATGGCGAGTTGAGAAG+AGG + tig0021492:29385-29404 None:intergenic 50.0%
TCTTCTCAACTCGCCATCGT+TGG - tig0021492:29384-29403 Msa1392270:CDS 50.0%
!!! GCACTTGGTGTGTGCGTTTT+TGG - tig0021492:30231-30250 Msa1392270:CDS 50.0%
!! TTGGCTACTAGGCTCTGAGA+AGG - tig0021492:30250-30269 Msa1392270:CDS 50.0%
CTACCCGCTATCAATTTCGG+TGG - tig0021492:31171-31190 Msa1392270:CDS 50.0%
TTCTCTATGACGTCGCTTGG+GGG - tig0021492:31499-31518 Msa1392270:CDS 50.0%
GGACTGGAGGTCAAGAACAA+AGG - tig0021492:31809-31828 Msa1392270:CDS 50.0%
! GAGGCATTTGCAGTGTACGT+TGG - tig0021492:31990-32009 Msa1392270:intron 50.0%
CAGGAGCAATGTAAGCACAC+AGG + tig0021492:32049-32068 None:intergenic 50.0%
CCCATCTACCCTCTTTGTCA+AGG - tig0021492:32139-32158 Msa1392270:intron 50.0%
GAAGGACCCATGGTTCATAC+AGG - tig0021492:32309-32328 Msa1392270:intron 50.0%
GCAAGCACCTGTATGAACCA+TGG + tig0021492:32319-32338 None:intergenic 50.0%
!! CGCGTAAATATCGACTCACC+TGG - tig0021492:32367-32386 Msa1392270:intron 50.0%
TGCGAACAGAACACCACCAA+CGG + tig0021492:32484-32503 None:intergenic 50.0%
CACTCGAAGAAGCAGCTTCA+TGG - tig0021492:32502-32521 Msa1392270:intron 50.0%
TCGAAGAAGCAGCTTCATGG+TGG - tig0021492:32505-32524 Msa1392270:intron 50.0%
AAGAAGCAGCTTCATGGTGG+AGG - tig0021492:32508-32527 Msa1392270:intron 50.0%
CAATTCTGTCATCAGGGAGG+AGG - tig0021492:32597-32616 Msa1392270:intron 50.0%
TGTGGTCTGTTTGGAGAAGG+GGG - tig0021492:32624-32643 Msa1392270:intron 50.0%
TGGAGTCATTGGAGGTCTCA+TGG - tig0021492:32719-32738 Msa1392270:intron 50.0%
GGAGTCATTGGAGGTCTCAT+GGG - tig0021492:32720-32739 Msa1392270:intron 50.0%
TTATAGCGCCGTAAGTGCGA+AGG + tig0021492:32776-32795 None:intergenic 50.0%
TCAAAGTGTGTGCCATGTCC+AGG - tig0021492:33219-33238 Msa1392270:intron 50.0%
CAAAGTGTGTGCCATGTCCA+GGG - tig0021492:33220-33239 Msa1392270:intron 50.0%
AAAGTGTGTGCCATGTCCAG+GGG - tig0021492:33221-33240 Msa1392270:intron 50.0%
TATTGAGAAGCCTGCGGTTG+GGG + tig0021492:33259-33278 None:intergenic 50.0%
GTATTGAGAAGCCTGCGGTT+GGG + tig0021492:33260-33279 None:intergenic 50.0%
TGTATTGAGAAGCCTGCGGT+TGG + tig0021492:33261-33280 None:intergenic 50.0%
ACGGGAATGAAGAGTCCAGA+GGG + tig0021492:33480-33499 None:intergenic 50.0%
AGAAGCTCCGGCAAGTATGA+CGG + tig0021492:33499-33518 None:intergenic 50.0%
TACTTGCCGGAGCTTCTTAC+GGG - tig0021492:33502-33521 Msa1392270:intron 50.0%
GCTTCTTACGGGCGTCTTAT+AGG - tig0021492:33513-33532 Msa1392270:intron 50.0%
GCGTCTTATAGGGACTGTGA+TGG - tig0021492:33524-33543 Msa1392270:intron 50.0%
!! CCATTCACAGCTCTGGATAC+GGG - tig0021492:33549-33568 Msa1392270:intron 50.0%
! ACGGGTTTGTTTGCTCTCCT+TGG - tig0021492:33567-33586 Msa1392270:intron 50.0%
!! TCATTCTCATGGTGCCACCA+AGG + tig0021492:33605-33624 None:intergenic 50.0%
CAGCCACTGTCTTAGAAACG+AGG + tig0021492:33701-33720 None:intergenic 50.0%
CACATGCAGAGCCATACATG+AGG - tig0021492:33784-33803 Msa1392270:intron 50.0%
GCAAAACCAGGTTTGGGAAG+AGG - tig0021492:34072-34091 Msa1392270:intron 50.0%
CTTATCCCTCTTCCCAAACC+TGG + tig0021492:34081-34100 None:intergenic 50.0%
CAGGTTTGGGAAGAGGGATA+AGG - tig0021492:34079-34098 Msa1392270:intron 50.0%
TTTGGGAAGAGGGATAAGGG+TGG - tig0021492:34083-34102 Msa1392270:intron 50.0%
AGGGATAAGGGTGGAGGATT+TGG - tig0021492:34092-34111 Msa1392270:intron 50.0%
!!! GCTCTTCTTTTTCGGGAGCT+TGG - tig0021492:34213-34232 Msa1392270:CDS 50.0%
!!! TTTTTCGGGAGCTTGGACTC+AGG - tig0021492:34220-34239 Msa1392270:CDS 50.0%
TGCAGAGGCCTCCAATTGTT+GGG - tig0021492:34377-34396 Msa1392270:five_prime_UTR 50.0%
GTCAGGATCCCAACAATTGG+AGG + tig0021492:34388-34407 None:intergenic 50.0%
!! ACTTGCGGGGATTCAAGTTG+GGG + tig0021492:34450-34469 None:intergenic 50.0%
CTACTTGCGGGGATTCAAGT+TGG + tig0021492:34452-34471 None:intergenic 50.0%
GCAGAGAGAGAGAGAGAGAG+AGG - tig0021492:29150-29169 Msa1392270:three_prime_UTR 55.0%
TCTCTATGACGTCGCTTGGG+GGG - tig0021492:31500-31519 Msa1392270:CDS 55.0%
TACATTGCTCCTGCAGCTGC+TGG - tig0021492:32056-32075 Msa1392270:intron 55.0%
TGTGGGGAAAGAAGGACCCA+TGG - tig0021492:32299-32318 Msa1392270:intron 55.0%
GAACAGAACACCACCAACGG+GGG + tig0021492:32481-32500 None:intergenic 55.0%
CGAACAGAACACCACCAACG+GGG + tig0021492:32482-32501 None:intergenic 55.0%
GCGAACAGAACACCACCAAC+GGG + tig0021492:32483-32502 None:intergenic 55.0%
GGAGGCAGATGTGGTCTGTT+TGG - tig0021492:32615-32634 Msa1392270:intron 55.0%
AAATCCGGCGTTAGCAGAGG+TGG + tig0021492:33385-33404 None:intergenic 55.0%
CTGAAATCCGGCGTTAGCAG+AGG + tig0021492:33388-33407 None:intergenic 55.0%
!! TACGGTGTTGCCATTCCCTC+TGG - tig0021492:33462-33481 Msa1392270:intron 55.0%
GACGGGAATGAAGAGTCCAG+AGG + tig0021492:33481-33500 None:intergenic 55.0%
GAAGCTCCGGCAAGTATGAC+GGG + tig0021492:33498-33517 None:intergenic 55.0%
AAGACGCCCGTAAGAAGCTC+CGG + tig0021492:33511-33530 None:intergenic 55.0%
GATGGCTCCATTCACAGCTC+TGG - tig0021492:33542-33561 Msa1392270:intron 55.0%
CCCGTATCCAGAGCTGTGAA+TGG + tig0021492:33552-33571 None:intergenic 55.0%
CAAGGAAAGATGCGGCTCCA+AGG + tig0021492:33587-33606 None:intergenic 55.0%
CTTGGAGCCGCATCTTTCCT+TGG - tig0021492:33585-33604 Msa1392270:intron 55.0%
! GGTGCCACCAAGGAAAGATG+CGG + tig0021492:33595-33614 None:intergenic 55.0%
!! GTGGCAGGGGATGTTGTTTC+TGG - tig0021492:33813-33832 Msa1392270:intron 55.0%
!! AACTCGGGAGCATCCGTCAA+AGG + tig0021492:33936-33955 None:intergenic 55.0%
AACACCAACCCGCACAACTC+GGG + tig0021492:33951-33970 None:intergenic 55.0%
CAACACCAACCCGCACAACT+CGG + tig0021492:33952-33971 None:intergenic 55.0%
!! AGTTGTGCGGGTTGGTGTTG+AGG - tig0021492:33952-33971 Msa1392270:intron 55.0%
ACTAGGGAGAGGGTGATGAC+AGG - tig0021492:34012-34031 Msa1392270:intron 55.0%
CTAGGGAGAGGGTGATGACA+GGG - tig0021492:34013-34032 Msa1392270:intron 55.0%
GTGCAGAGGCCTCCAATTGT+TGG - tig0021492:34376-34395 Msa1392270:five_prime_UTR 55.0%
!! TGCTGGCTCTGGCATACCAG+AGG - tig0021492:32073-32092 Msa1392270:intron 60.0%
ATTACGTGCGGTGCAGCTGC+TGG - tig0021492:32435-32454 Msa1392270:intron 60.0%
!! GGTGGAGGAGTGCTCTTCTG+TGG - tig0021492:32523-32542 Msa1392270:intron 60.0%
CATCAGGGAGGAGGCAGATG+TGG - tig0021492:32606-32625 Msa1392270:intron 60.0%
GTTGCGGATGGCATCGTCGT+TGG + tig0021492:33346-33365 None:intergenic 60.0%
GGTTCCACCTCTGCTAACGC+CGG - tig0021492:33378-33397 Msa1392270:intron 60.0%
GGAGCCGCATCTTTCCTTGG+TGG - tig0021492:33588-33607 Msa1392270:intron 60.0%
!! TCGGGAGCATCCGTCAAAGG+AGG + tig0021492:33933-33952 None:intergenic 60.0%
ACGGATGCTCCCGAGTTGTG+CGG - tig0021492:33939-33958 Msa1392270:intron 60.0%
GGGAAGAGGGATAAGGGTGG+AGG - tig0021492:34086-34105 Msa1392270:intron 60.0%
ATGCCAGAGCCAGCAGCTGC+AGG + tig0021492:32068-32087 None:intergenic 65.0%
GAACACCACCAACGGGGGCA+CGG + tig0021492:32476-32495 None:intergenic 65.0%
AGGTCGGGTGTGGTGTAGGC+AGG + tig0021492:32681-32700 None:intergenic 65.0%
GAGGAGGTCGGGTGTGGTGT+AGG + tig0021492:32685-32704 None:intergenic 65.0%
AACTGCGAGGAGGTCGGGTG+TGG + tig0021492:32691-32710 None:intergenic 65.0%
CTGGGACACTCCCCTGGACA+TGG + tig0021492:33234-33253 None:intergenic 65.0%
AAGCCTGCGGTTGGGGAGCT+GGG + tig0021492:33252-33271 None:intergenic 65.0%
CGGATGCTCCCGAGTTGTGC+GGG - tig0021492:33940-33959 Msa1392270:intron 65.0%
TGCTCCCGAGTTGTGCGGGT+TGG - tig0021492:33944-33963 Msa1392270:intron 65.0%
!! GCTCCTGCAGCTGCTGGCTC+TGG - tig0021492:32062-32081 Msa1392270:intron 70.0%
! AACGGGGGCACGGAAGGCTG+CGG + tig0021492:32466-32485 None:intergenic 70.0%
! ACCACCAACGGGGGCACGGA+AGG + tig0021492:32472-32491 None:intergenic 70.0%
TGTCCCAGCTCCCCAACCGC+AGG - tig0021492:33246-33265 Msa1392270:intron 70.0%
GAAGCCTGCGGTTGGGGAGC+TGG + tig0021492:33253-33272 None:intergenic 70.0%
GCAGCCTTCCGTGCCCCCGT+TGG - tig0021492:32465-32484 Msa1392270:intron 75.0%
GCCTTCCGTGCCCCCGTTGG+TGG - tig0021492:32468-32487 Msa1392270:intron 75.0%
GGGGAGCTGGGACACTCCCC+TGG + tig0021492:33240-33259 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
tig0021492 gene 29122 34526 29122 ID=Msa1392270;Name=Msa1392270
tig0021492 mRNA 29122 34526 29122 ID=Msa1392270-mRNA-1;Parent=Msa1392270;Name=Msa1392270-mRNA-1;_AED=0.03;_eAED=0.03;_QI=166|0.8|0.5|1|1|1|6|55|736
tig0021492 exon 29122 29266 29122 ID=Msa1392270-mRNA-1:exon:13095;Parent=Msa1392270-mRNA-1
tig0021492 exon 29376 29594 29376 ID=Msa1392270-mRNA-1:exon:13094;Parent=Msa1392270-mRNA-1
tig0021492 exon 29683 30511 29683 ID=Msa1392270-mRNA-1:exon:13093;Parent=Msa1392270-mRNA-1
tig0021492 exon 30849 31387 30849 ID=Msa1392270-mRNA-1:exon:13092;Parent=Msa1392270-mRNA-1
tig0021492 exon 31488 31866 31488 ID=Msa1392270-mRNA-1:exon:13091;Parent=Msa1392270-mRNA-1
tig0021492 exon 34206 34526 34206 ID=Msa1392270-mRNA-1:exon:13090;Parent=Msa1392270-mRNA-1
tig0021492 five_prime_UTR 34361 34526 34361 ID=Msa1392270-mRNA-1:five_prime_utr;Parent=Msa1392270-mRNA-1
tig0021492 CDS 34206 34360 34206 ID=Msa1392270-mRNA-1:cds;Parent=Msa1392270-mRNA-1
tig0021492 CDS 31488 31866 31488 ID=Msa1392270-mRNA-1:cds;Parent=Msa1392270-mRNA-1
tig0021492 CDS 30849 31387 30849 ID=Msa1392270-mRNA-1:cds;Parent=Msa1392270-mRNA-1
tig0021492 CDS 29683 30511 29683 ID=Msa1392270-mRNA-1:cds;Parent=Msa1392270-mRNA-1
tig0021492 CDS 29376 29594 29376 ID=Msa1392270-mRNA-1:cds;Parent=Msa1392270-mRNA-1
tig0021492 CDS 29177 29266 29177 ID=Msa1392270-mRNA-1:cds;Parent=Msa1392270-mRNA-1
tig0021492 three_prime_UTR 29122 29176 29122 ID=Msa1392270-mRNA-1:three_prime_utr;Parent=Msa1392270-mRNA-1
Gene Sequence

>Msa1392270

ATGGACATGATGGAGTCACTAACAGAGGAAAGGATGATTGAGATAAGAGATGATGATCACAAACAGCCGTTACTTCTCAGAAGCAGAATTAATACCTCTTCTCAACTCGCCATCGTTGGAGCCAATATTTGCCCTATTCAGAGTCTTGATTACGAGTTAATTGAGAATGATCTATTGAAACAGGACTGGAGGTCAAGAACAAAGGTTGAGATATACCAATATGTTGTTCTGAAGTGGACCCTTGCACTTCTTATTGGTTTAATTACAGGACTTGTTGGGTTCTTTAATAACCTTGGAGTTGAGAATATTGCTGGTTTCAAACTTCTACTCACCAACAATCTCATGCTCAAGCAAAAGTATCACGAGGCATTTGCAGTGTACGTTGGTTGTAACATGATTTTAGGGGTTGGTGCTGCAGCCCTGTGTGCTTACATTGCTCCTGCAGCTGCTGGCTCTGGCATACCAGAGGTGAAAGCATACCTCAACGGCATTGATGCACATTCTATATTGGCCCCATCTACCCTCTTTGTCAAGATATTTGGTTCGATTTTAGGAGTTGCTGCTGGTTTTATTGTGGGGAAAGAAGGACCCATGGTTCATACAGGTGCTTGCATTGCTAATTTACTCGGACAAGGTGGTTCGCGTAAATATCGACTCACCTGGAAATGGCTCAGATACTTCAAAAATGATAGAGATAGGAGGGATTTGATTACGTGCGGTGCAGCTGCTGGTGTTGCCGCAGCCTTCCGTGCCCCCGTTGGTGGTGTTCTGTTCGCACTCGAAGAAGCAGCTTCATGGTGGAGGAGTGCTCTTCTGTGGCGCACATTCTTTACCACTGCAGTAGTAGCAGTTGTTTTGAGGAGTCTTATGCAATTCTGTCATCAGGGAGGAGGCAGATGTGGTCTGTTTGGAGAAGGGGGACTCATCATGTTTGATGTTAATTCTGCAAAGCCTGCCTACACCACACCCGACCTCCTCGCAGTTATATTTCTTGGAGTCATTGGAGGTCTCATGGGAAGCCTTTACAATTATCTTGTCGATAAAGTCCTTCGCACTTACGGCGCTATAAATGAGAGAGGTCCAATATTCAAGATTATACTGGTGATGATTATCTCGTTTGTAACCTCCTGTATTCGATTTGGGCTTCCATTGCTATCAAAGTGTGTGCCATGTCCAGGGGAGTGTCCCAGCTCCCCAACCGCAGGCTTCTCAATACACTACGACAATTTTCAGTGTCCACCAAACCACTACAATGATCTCAGCTCTCTATTTTTCACTACCAACGACGATGCCATCCGCAACCTATTCAACGATGGTTCCACCTCTGCTAACGCCGGATTTCAGCTATCAAGTCTCTTAGTTTTCTTTGTGGCGATATACTTGCTTGGAATTGTGACATACGGTGTTGCCATTCCCTCTGGACTCTTCATTCCCGTCATACTTGCCGGAGCTTCTTACGGGCGTCTTATAGGGACTGTGATGGCTCCATTCACAGCTCTGGATACGGGTTTGTTTGCTCTCCTTGGAGCCGCATCTTTCCTTGGTGGCACCATGAGAATGACAGTTTCTCTATGTGTCATACTTCTTGAACTCACTAATAACTTGTTGATGCTACCATTGGTCATGTTGGTTCTCCTCGTTTCTAAGACAGTGGCTGATTGTTTTAACAAAGGTGTTTATGATCAGATTGTGGAGTTGAAGGGACTACCTTATATGGAAGCACATGCAGAGCCATACATGAGGAATTTAGTGGCAGGGGATGTTGTTTCTGGTCCACTGTTTTCTTTTTGTGGGATAGAAAAAGTGGGGAATATATTGCACGCTTTGAAAGTGACAGAACATCACGGATTTCCAGTAGTTGATGAGCCTCCTTTGACGGATGCTCCCGAGTTGTGCGGGTTGGTTAAGGCAAGGGATTTTGCAAAACCAGGTTTGGGAAGAGGGATAAGGGTGGAGGATTTGGACATTTCACAAGAGGAGATGGAAATGTTTGTTGATCTTCATCCAATCACAAATACTTCTCCATATACTGTTGTTGAAACAATGTCTCTTGCAAAAGCCGCTCTTCTTTTTCGGGAGCTTGGACTCAGGCATTTGCTAGTTGTGCCTAAGAAACCAGGAAGGCCTCCAATTGTTGGGATCCTGACAAGGCATGATTTCATGCACGACTATATCTTGGGTCTATTCCCCAACTTGAATCCCCGCAAGTAG

Protein sequence

>Msa1392270

MDMMESLTEERMIEIRDDDHKQPLLLRSRINTSSQLAIVGANICPIQSLDYELIENDLLKQDWRSRTKVEIYQYVVLKWTLALLIGLITGLVGFFNNLGVENIAGFKLLLTNNLMLKQKYHEAFAVYVGCNMILGVGAAALCAYIAPAAAGSGIPEVKAYLNGIDAHSILAPSTLFVKIFGSILGVAAGFIVGKEGPMVHTGACIANLLGQGGSRKYRLTWKWLRYFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRSLMQFCHQGGGRCGLFGEGGLIMFDVNSAKPAYTTPDLLAVIFLGVIGGLMGSLYNYLVDKVLRTYGAINERGPIFKIILVMIISFVTSCIRFGLPLLSKCVPCPGECPSSPTAGFSIHYDNFQCPPNHYNDLSSLFFTTNDDAIRNLFNDGSTSANAGFQLSSLLVFFVAIYLLGIVTYGVAIPSGLFIPVILAGASYGRLIGTVMAPFTALDTGLFALLGAASFLGGTMRMTVSLCVILLELTNNLLMLPLVMLVLLVSKTVADCFNKGVYDQIVELKGLPYMEAHAEPYMRNLVAGDVVSGPLFSFCGIEKVGNILHALKVTEHHGFPVVDEPPLTDAPELCGLVKARDFAKPGLGRGIRVEDLDISQEEMEMFVDLHPITNTSPYTVVETMSLAKAALLFRELGLRHLLVVPKKPGRPPIVGILTRHDFMHDYILGLFPNLNPRK*