Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0197920 | XP_013462938.1 | 97.211 | 251 | 7 | 0 | 1 | 251 | 1 | 251 | 5.06e-167 | 471 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0197920 | A0A072V6K8 | 97.211 | 251 | 7 | 0 | 1 | 251 | 1 | 251 | 2.42e-167 | 471 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0011060 | Msa0197920 | -0.818673 | 1.733340e-52 | -8.615850e-47 |
Msa0011100 | Msa0197920 | -0.813360 | 2.662173e-51 | -8.615850e-47 |
Msa0029730 | Msa0197920 | 0.804752 | 1.857991e-49 | -8.615850e-47 |
Msa0034100 | Msa0197920 | -0.811212 | 7.837761e-51 | -8.615850e-47 |
Msa0036560 | Msa0197920 | -0.826112 | 3.243362e-54 | -8.615850e-47 |
Msa0037180 | Msa0197920 | 0.807177 | 5.741899e-50 | -8.615850e-47 |
Msa0045620 | Msa0197920 | 0.814322 | 1.634470e-51 | -8.615850e-47 |
Msa0048410 | Msa0197920 | -0.817894 | 2.602054e-52 | -8.615850e-47 |
Msa0050320 | Msa0197920 | -0.841425 | 4.788420e-58 | -8.615850e-47 |
Msa0060080 | Msa0197920 | -0.801511 | 8.698458e-49 | -8.615850e-47 |
Msa0067750 | Msa0197920 | -0.814011 | 1.914006e-51 | -8.615850e-47 |
Msa0072390 | Msa0197920 | -0.803027 | 4.239589e-49 | -8.615850e-47 |
Msa0078990 | Msa0197920 | 0.812561 | 3.984223e-51 | -8.615850e-47 |
Msa0081290 | Msa0197920 | -0.820601 | 6.291771e-53 | -8.615850e-47 |
Msa0089540 | Msa0197920 | 0.807861 | 4.110800e-50 | -8.615850e-47 |
Msa0092220 | Msa0197920 | 0.801405 | 9.143898e-49 | -8.615850e-47 |
Msa0099090 | Msa0197920 | -0.852046 | 5.969596e-61 | -8.615850e-47 |
Msa0110240 | Msa0197920 | 0.839327 | 1.693034e-57 | -8.615850e-47 |
Msa0128340 | Msa0197920 | 0.800477 | 1.414808e-48 | -8.615850e-47 |
Msa0130360 | Msa0197920 | 0.810023 | 1.416661e-50 | -8.615850e-47 |
Msa0132080 | Msa0197920 | -0.817556 | 3.101854e-52 | -8.615850e-47 |
Msa0139280 | Msa0197920 | -0.818496 | 1.901558e-52 | -8.615850e-47 |
Msa0154720 | Msa0197920 | -0.839885 | 1.212243e-57 | -8.615850e-47 |
Msa0169710 | Msa0197920 | 0.836015 | 1.198863e-56 | -8.615850e-47 |
Msa0171510 | Msa0197920 | 0.804168 | 2.459337e-49 | -8.615850e-47 |
Msa0189150 | Msa0197920 | -0.804597 | 2.000997e-49 | -8.615850e-47 |
Msa0195030 | Msa0197920 | 0.813242 | 2.826792e-51 | -8.615850e-47 |
Msa0197920 | Msa0211460 | 0.814389 | 1.579497e-51 | -8.615850e-47 |
Msa0197920 | Msa0216150 | -0.809002 | 2.346066e-50 | -8.615850e-47 |
Msa0197920 | Msa0219840 | 0.800102 | 1.686592e-48 | -8.615850e-47 |
Msa0197920 | Msa0223590 | 0.811471 | 6.886079e-51 | -8.615850e-47 |
Msa0197920 | Msa0225070 | -0.830879 | 2.289999e-55 | -8.615850e-47 |
Msa0197920 | Msa0232660 | -0.820859 | 5.489268e-53 | -8.615850e-47 |
Msa0197920 | Msa0235080 | 0.815632 | 8.369769e-52 | -8.615850e-47 |
Msa0197920 | Msa0237180 | 0.822565 | 2.213378e-53 | -8.615850e-47 |
Msa0197920 | Msa0264890 | 0.816305 | 5.921761e-52 | -8.615850e-47 |
Msa0197920 | Msa0266140 | -0.828071 | 1.102055e-54 | -8.615850e-47 |
Msa0197920 | Msa0277320 | 0.916121 | 2.605692e-85 | -8.615850e-47 |
Msa0197920 | Msa0278920 | 0.815515 | 8.886889e-52 | -8.615850e-47 |
Msa0197920 | Msa0290800 | 0.828141 | 1.059996e-54 | -8.615850e-47 |
Msa0197920 | Msa0297270 | -0.819702 | 1.010720e-52 | -8.615850e-47 |
Msa0197920 | Msa0304060 | -0.822253 | 2.614923e-53 | -8.615850e-47 |
Msa0197920 | Msa0304350 | -0.807720 | 4.403644e-50 | -8.615850e-47 |
Msa0197920 | Msa0305910 | -0.808481 | 3.032094e-50 | -8.615850e-47 |
Msa0197920 | Msa0315660 | 0.821367 | 4.192649e-53 | -8.615850e-47 |
Msa0197920 | Msa0317300 | 0.953240 | 4.238830e-111 | -8.615850e-47 |
Msa0197920 | Msa0328870 | 0.837882 | 3.999184e-57 | -8.615850e-47 |
Msa0197920 | Msa0340270 | 0.810992 | 8.745818e-51 | -8.615850e-47 |
Msa0197920 | Msa0340830 | -0.807685 | 4.478955e-50 | -8.615850e-47 |
Msa0197920 | Msa0341860 | -0.806898 | 6.577421e-50 | -8.615850e-47 |
Msa0197920 | Msa0364030 | -0.821340 | 4.254475e-53 | -8.615850e-47 |
Msa0197920 | Msa0364910 | -0.804520 | 2.077152e-49 | -8.615850e-47 |
Msa0197920 | Msa0372100 | 0.832938 | 7.102153e-56 | -8.615850e-47 |
Msa0197920 | Msa0373550 | 0.803713 | 3.057497e-49 | -8.615850e-47 |
Msa0197920 | Msa0375500 | 0.811152 | 8.075425e-51 | -8.615850e-47 |
Msa0197920 | Msa0378620 | -0.803977 | 2.694171e-49 | -8.615850e-47 |
Msa0197920 | Msa0380590 | 0.810035 | 1.407925e-50 | -8.615850e-47 |
Msa0197920 | Msa0383930 | 0.808619 | 2.832766e-50 | -8.615850e-47 |
Msa0197920 | Msa0385030 | 0.801893 | 7.261416e-49 | -8.615850e-47 |
Msa0197920 | Msa0387890 | 0.811164 | 8.029861e-51 | -8.615850e-47 |
Msa0197920 | Msa0403740 | -0.821674 | 3.561307e-53 | -8.615850e-47 |
Msa0197920 | Msa0419420 | -0.816145 | 6.431793e-52 | -8.615850e-47 |
Msa0197920 | Msa0421290 | 0.810382 | 1.185213e-50 | -8.615850e-47 |
Msa0197920 | Msa0426030 | 0.801526 | 8.639165e-49 | -8.615850e-47 |
Msa0197920 | Msa0426170 | 0.806842 | 6.760051e-50 | -8.615850e-47 |
Msa0197920 | Msa0427260 | -0.814378 | 1.588047e-51 | -8.615850e-47 |
Msa0197920 | Msa0432260 | -0.833947 | 3.978875e-56 | -8.615850e-47 |
Msa0197920 | Msa0434370 | 0.816087 | 6.623896e-52 | -8.615850e-47 |
Msa0197920 | Msa0452120 | -0.800325 | 1.519809e-48 | -8.615850e-47 |
Msa0197920 | Msa0456450 | -0.818580 | 1.820517e-52 | -8.615850e-47 |
Msa0197920 | Msa0467250 | 0.842761 | 2.121890e-58 | -8.615850e-47 |
Msa0197920 | Msa0476730 | -0.835499 | 1.619037e-56 | -8.615850e-47 |
Msa0197920 | Msa0483090 | -0.819159 | 1.344709e-52 | -8.615850e-47 |
Msa0197920 | Msa0500420 | 0.813272 | 2.783922e-51 | -8.615850e-47 |
Msa0197920 | Msa0513580 | -0.806966 | 6.363655e-50 | -8.615850e-47 |
Msa0197920 | Msa0514540 | 0.809865 | 1.531730e-50 | -8.615850e-47 |
Msa0197920 | Msa0527560 | 0.986812 | 4.694531e-168 | -8.615850e-47 |
Msa0197920 | Msa0530660 | 0.802215 | 6.234516e-49 | -8.615850e-47 |
Msa0197920 | Msa0533610 | -0.808309 | 3.299816e-50 | -8.615850e-47 |
Msa0197920 | Msa0538050 | -0.814947 | 1.188406e-51 | -8.615850e-47 |
Msa0197920 | Msa0538650 | 0.816774 | 4.650224e-52 | -8.615850e-47 |
Msa0197920 | Msa0540160 | -0.820757 | 5.792799e-53 | -8.615850e-47 |
Msa0197920 | Msa0545750 | -0.805667 | 1.194964e-49 | -8.615850e-47 |
Msa0197920 | Msa0559440 | -0.805605 | 1.231462e-49 | -8.615850e-47 |
Msa0197920 | Msa0559640 | -0.807801 | 4.232969e-50 | -8.615850e-47 |
Msa0197920 | Msa0566460 | 0.839764 | 1.303486e-57 | -8.615850e-47 |
Msa0197920 | Msa0566930 | 0.839000 | 2.058824e-57 | -8.615850e-47 |
Msa0197920 | Msa0575950 | 0.810764 | 9.801041e-51 | -8.615850e-47 |
Msa0197920 | Msa0576500 | -0.806155 | 9.434816e-50 | -8.615850e-47 |
Msa0197920 | Msa0582270 | -0.808134 | 3.595099e-50 | -8.615850e-47 |
Msa0197920 | Msa0587180 | 0.803075 | 4.144483e-49 | -8.615850e-47 |
Msa0197920 | Msa0610240 | -0.803906 | 2.787502e-49 | -8.615850e-47 |
Msa0197920 | Msa0612880 | -0.807738 | 4.365543e-50 | -8.615850e-47 |
Msa0197920 | Msa0623310 | 0.821278 | 4.396201e-53 | -8.615850e-47 |
Msa0197920 | Msa0624930 | 0.800124 | 1.669839e-48 | -8.615850e-47 |
Msa0197920 | Msa0626980 | 0.807139 | 5.849384e-50 | -8.615850e-47 |
Msa0197920 | Msa0627360 | 0.801770 | 7.697735e-49 | -8.615850e-47 |
Msa0197920 | Msa0654500 | -0.801861 | 7.374770e-49 | -8.615850e-47 |
Msa0197920 | Msa0658120 | 0.848888 | 4.597840e-60 | -8.615850e-47 |
Msa0197920 | Msa0659020 | -0.826439 | 2.711424e-54 | -8.615850e-47 |
Msa0197920 | Msa0671400 | 0.818624 | 1.778770e-52 | -8.615850e-47 |
Msa0197920 | Msa0673940 | 0.812316 | 4.508179e-51 | -8.615850e-47 |
Msa0197920 | Msa0685390 | -0.827098 | 1.886927e-54 | -8.615850e-47 |
Msa0197920 | Msa0702020 | -0.800765 | 1.235802e-48 | -8.615850e-47 |
Msa0197920 | Msa0702690 | -0.804517 | 2.079369e-49 | -8.615850e-47 |
Msa0197920 | Msa0702970 | 0.848811 | 4.830127e-60 | -8.615850e-47 |
Msa0197920 | Msa0703430 | -0.804061 | 2.587491e-49 | -8.615850e-47 |
Msa0197920 | Msa0706690 | 0.816464 | 5.456353e-52 | -8.615850e-47 |
Msa0197920 | Msa0707880 | -0.804789 | 1.824795e-49 | -8.615850e-47 |
Msa0197920 | Msa0716700 | 0.825766 | 3.918523e-54 | -8.615850e-47 |
Msa0197920 | Msa0733240 | -0.830297 | 3.179931e-55 | -8.615850e-47 |
Msa0197920 | Msa0756670 | -0.822780 | 1.972189e-53 | -8.615850e-47 |
Msa0197920 | Msa0768240 | -0.801438 | 9.002260e-49 | -8.615850e-47 |
Msa0197920 | Msa0769910 | -0.805779 | 1.132215e-49 | -8.615850e-47 |
Msa0197920 | Msa0772420 | 0.830033 | 3.687380e-55 | -8.615850e-47 |
Msa0197920 | Msa0777210 | 0.804128 | 2.506311e-49 | -8.615850e-47 |
Msa0197920 | Msa0797980 | -0.815448 | 9.196122e-52 | -8.615850e-47 |
Msa0197920 | Msa0807870 | -0.801793 | 7.615760e-49 | -8.615850e-47 |
Msa0197920 | Msa0812020 | -0.804479 | 2.118057e-49 | -8.615850e-47 |
Msa0197920 | Msa0828350 | 0.819158 | 1.344942e-52 | -8.615850e-47 |
Msa0197920 | Msa0829770 | -0.821498 | 3.911000e-53 | -8.615850e-47 |
Msa0197920 | Msa0836060 | -0.817535 | 3.136509e-52 | -8.615850e-47 |
Msa0197920 | Msa0846900 | 0.812682 | 3.749703e-51 | -8.615850e-47 |
Msa0197920 | Msa0847140 | 0.809187 | 2.142354e-50 | -8.615850e-47 |
Msa0197920 | Msa0848670 | -0.804047 | 2.605501e-49 | -8.615850e-47 |
Msa0197920 | Msa0852090 | -0.816471 | 5.436908e-52 | -8.615850e-47 |
Msa0197920 | Msa0870220 | -0.810778 | 9.731826e-51 | -8.615850e-47 |
Msa0197920 | Msa0871420 | 0.811175 | 7.985653e-51 | -8.615850e-47 |
Msa0197920 | Msa0880050 | 0.804942 | 1.695544e-49 | -8.615850e-47 |
Msa0197920 | Msa0898830 | -0.825691 | 4.082156e-54 | -8.615850e-47 |
Msa0197920 | Msa0903460 | -0.820614 | 6.249924e-53 | -8.615850e-47 |
Msa0197920 | Msa0907170 | 0.845407 | 4.139300e-59 | -8.615850e-47 |
Msa0197920 | Msa0913520 | 0.820805 | 5.648125e-53 | -8.615850e-47 |
Msa0197920 | Msa0921340 | 0.805987 | 1.023820e-49 | -8.615850e-47 |
Msa0197920 | Msa0921860 | 0.809526 | 1.811931e-50 | -8.615850e-47 |
Msa0197920 | Msa0932150 | 0.809293 | 2.032409e-50 | -8.615850e-47 |
Msa0197920 | Msa0935930 | -0.833758 | 4.436686e-56 | -8.615850e-47 |
Msa0197920 | Msa0941150 | -0.810326 | 1.218367e-50 | -8.615850e-47 |
Msa0197920 | Msa0959850 | 0.806362 | 8.535622e-50 | -8.615850e-47 |
Msa0197920 | Msa0967900 | -0.830061 | 3.630807e-55 | -8.615850e-47 |
Msa0197920 | Msa0972930 | -0.806256 | 8.985830e-50 | -8.615850e-47 |
Msa0197920 | Msa0987670 | 0.833931 | 4.016723e-56 | -8.615850e-47 |
Msa0197920 | Msa1014550 | -0.809920 | 1.490683e-50 | -8.615850e-47 |
Msa0197920 | Msa1024570 | 0.806476 | 8.075908e-50 | -8.615850e-47 |
Msa0197920 | Msa1031530 | -0.808852 | 2.526614e-50 | -8.615850e-47 |
Msa0197920 | Msa1055520 | -0.807522 | 4.851115e-50 | -8.615850e-47 |
Msa0197920 | Msa1070630 | -0.822962 | 1.788981e-53 | -8.615850e-47 |
Msa0197920 | Msa1078300 | 0.810626 | 1.049861e-50 | -8.615850e-47 |
Msa0197920 | Msa1078590 | -0.813189 | 2.903391e-51 | -8.615850e-47 |
Msa0197920 | Msa1078760 | -0.810561 | 1.084298e-50 | -8.615850e-47 |
Msa0197920 | Msa1088260 | 0.819178 | 1.331342e-52 | -8.615850e-47 |
Msa0197920 | Msa1093190 | -0.854622 | 1.088679e-61 | -8.615850e-47 |
Msa0197920 | Msa1104020 | -0.814040 | 1.886009e-51 | -8.615850e-47 |
Msa0197920 | Msa1112230 | -0.801702 | 7.949995e-49 | -8.615850e-47 |
Msa0197920 | Msa1127200 | 0.807144 | 5.834199e-50 | -8.615850e-47 |
Msa0197920 | Msa1146980 | 0.827632 | 1.405719e-54 | -8.615850e-47 |
Msa0197920 | Msa1158450 | -0.810450 | 1.145878e-50 | -8.615850e-47 |
Msa0197920 | Msa1167360 | 0.802548 | 5.325657e-49 | -8.615850e-47 |
Msa0197920 | Msa1169590 | -0.813332 | 2.700959e-51 | -8.615850e-47 |
Msa0197920 | Msa1186260 | 0.846951 | 1.572725e-59 | -8.615850e-47 |
Msa0197920 | Msa1186670 | 0.801528 | 8.629170e-49 | -8.615850e-47 |
Msa0197920 | Msa1191960 | -0.800635 | 1.314068e-48 | -8.615850e-47 |
Msa0197920 | Msa1194480 | -0.813590 | 2.370054e-51 | -8.615850e-47 |
Msa0197920 | Msa1200360 | 0.820040 | 8.463563e-53 | -8.615850e-47 |
Msa0197920 | Msa1205270 | -0.822119 | 2.809122e-53 | -8.615850e-47 |
Msa0197920 | Msa1207710 | -0.811660 | 6.265632e-51 | -8.615850e-47 |
Msa0197920 | Msa1214960 | 0.806189 | 9.280715e-50 | -8.615850e-47 |
Msa0197920 | Msa1251500 | 0.811009 | 8.673728e-51 | -8.615850e-47 |
Msa0197920 | Msa1253270 | 0.807071 | 6.045812e-50 | -8.615850e-47 |
Msa0197920 | Msa1253300 | 0.817044 | 4.044154e-52 | -8.615850e-47 |
Msa0197920 | Msa1281780 | 0.828393 | 9.215637e-55 | -8.615850e-47 |
Msa0197920 | Msa1286860 | -0.809726 | 1.640998e-50 | -8.615850e-47 |
Msa0197920 | Msa1286950 | -0.830387 | 3.022810e-55 | -8.615850e-47 |
Msa0197920 | Msa1290090 | -0.809215 | 2.112912e-50 | -8.615850e-47 |
Msa0197920 | Msa1292140 | 0.800767 | 1.235205e-48 | -8.615850e-47 |
Msa0197920 | Msa1295210 | -0.817033 | 4.067397e-52 | -8.615850e-47 |
Msa0197920 | Msa1297220 | -0.818382 | 2.018744e-52 | -8.615850e-47 |
Msa0197920 | Msa1298980 | -0.810869 | 9.301592e-51 | -8.615850e-47 |
Msa0197920 | Msa1319230 | -0.834792 | 2.442582e-56 | -8.615850e-47 |
Msa0197920 | Msa1320660 | -0.816846 | 4.479469e-52 | -8.615850e-47 |
Msa0197920 | Msa1321010 | 0.812212 | 4.750048e-51 | -8.615850e-47 |
Msa0197920 | Msa1323260 | -0.828675 | 7.879433e-55 | -8.615850e-47 |
Msa0197920 | Msa1342360 | -0.817969 | 2.502589e-52 | -8.615850e-47 |
Msa0197920 | Msa1343450 | -0.823783 | 1.149893e-53 | -8.615850e-47 |
Msa0197920 | Msa1344930 | 0.813321 | 2.715328e-51 | -8.615850e-47 |
Msa0197920 | Msa1348860 | -0.805877 | 1.079558e-49 | -8.615850e-47 |
Msa0197920 | Msa1350580 | -0.807857 | 4.117819e-50 | -8.615850e-47 |
Msa0197920 | Msa1365130 | -0.800723 | 1.260698e-48 | -8.615850e-47 |
Msa0197920 | Msa1367900 | -0.802544 | 5.335533e-49 | -8.615850e-47 |
Msa0197920 | Msa1371060 | -0.806187 | 9.289097e-50 | -8.615850e-47 |
Msa0197920 | Msa1371800 | 0.809759 | 1.614125e-50 | -8.615850e-47 |
Msa0197920 | Msa1376310 | 0.812029 | 5.206051e-51 | -8.615850e-47 |
Msa0197920 | Msa1384410 | -0.830479 | 2.870310e-55 | -8.615850e-47 |
Msa0197920 | Msa1392570 | -0.820042 | 8.452336e-53 | -8.615850e-47 |
Msa0197920 | Msa1395050 | 0.844547 | 7.065439e-59 | -8.615850e-47 |
Msa0197920 | Msa1400240 | -0.801269 | 9.749513e-49 | -8.615850e-47 |
Msa0197920 | Msa1409060 | 0.804528 | 2.068690e-49 | -8.615850e-47 |
Msa0197920 | Msa1412740 | -0.819028 | 1.439749e-52 | -8.615850e-47 |
Msa0197920 | Msa1421540 | 0.804141 | 2.490240e-49 | -8.615850e-47 |
Msa0197920 | Msa1422150 | -0.810153 | 1.327859e-50 | -8.615850e-47 |
Msa0197920 | Msa1423050 | 0.804210 | 2.409659e-49 | -8.615850e-47 |
Msa0197920 | Msa1429810 | 0.808775 | 2.624399e-50 | -8.615850e-47 |
Msa0197920 | Msa1430250 | 0.985305 | 3.736243e-163 | -8.615850e-47 |
Msa0197920 | Msa1444660 | 0.811952 | 5.412745e-51 | -8.615850e-47 |
Msa0197920 | Msa1464470 | -0.803434 | 3.492082e-49 | -8.615850e-47 |
Msa0197920 | Msa1466530 | 0.825412 | 4.755034e-54 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0197920 | MtrunA17_Chr2g0290461 | 97.211 | 251 | 7 | 0 | 1 | 251 | 1 | 251 | 4.66e-171 | 471 |
Msa0197920 | MtrunA17_Chr4g0076261 | 80.556 | 72 | 14 | 0 | 4 | 75 | 8 | 79 | 8.26e-31 | 115 |
Msa0197920 | MtrunA17_Chr7g0236071 | 73.333 | 75 | 20 | 0 | 1 | 75 | 1 | 75 | 3.80e-22 | 90.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0197920 | AT4G16380.1 | 42.222 | 270 | 113 | 7 | 3 | 251 | 7 | 254 | 4.08e-39 | 136 |
Msa0197920 | AT4G16380.3 | 41.636 | 269 | 114 | 7 | 4 | 251 | 15 | 261 | 3.75e-38 | 134 |
Msa0197920 | AT1G51090.1 | 60.526 | 76 | 30 | 0 | 1 | 76 | 1 | 76 | 2.94e-25 | 98.6 |
Msa0197920 | AT4G16380.2 | 40.343 | 233 | 112 | 8 | 32 | 251 | 15 | 233 | 6.11e-21 | 88.6 |
Msa0197920 | AT1G49420.1 | 35.968 | 253 | 88 | 10 | 3 | 251 | 7 | 189 | 2.60e-17 | 77.8 |
Find 87 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCGGCTTCTTTAGCGGGCT+TGG | 0.155696 | 2_1:+16268098 | None:intergenic |
CTTCTCGGGCTCAGCGGACT+TGG | 0.187553 | 2_1:+16268158 | None:intergenic |
GACTCAGCTGGTTTGGGCTT+TGG | 0.238535 | 2_1:+16268207 | None:intergenic |
TTCTCGGACTCAGCTGGTTT+GGG | 0.239304 | 2_1:+16268201 | None:intergenic |
CTTCTCGGACTCAGCTGGTT+TGG | 0.246232 | 2_1:+16268200 | None:intergenic |
AGCAAGAAATTCAACTTTAT+AGG | 0.257693 | 2_1:-16269003 | Msa0197920:five_prime_UTR |
GCAAGAAATTCAACTTTATA+GGG | 0.260805 | 2_1:-16269002 | Msa0197920:five_prime_UTR |
AGTTGGTGCAGGCTTGTCTT+TGG | 0.267176 | 2_1:+16267963 | None:intergenic |
TTGCTTTGACATCATACTTT+TGG | 0.273180 | 2_1:+16268334 | None:intergenic |
GTTGGTGCAGGCTTGTCTTT+GGG | 0.307288 | 2_1:+16267964 | None:intergenic |
TTCAGCTTCAGGCTTTGGCT+TGG | 0.335388 | 2_1:+16267990 | None:intergenic |
AGCAGAGCAACAACACAAAA+TGG | 0.336414 | 2_1:+16268919 | None:intergenic |
TCAGCTTCAGGCTTTGGCTT+GGG | 0.337195 | 2_1:+16267991 | None:intergenic |
CGCTGAGCCCGAGAAGAAAA+AGG | 0.353767 | 2_1:-16268151 | Msa0197920:CDS |
TCGGCTTCTTTAGCGGGCTT+GGG | 0.362622 | 2_1:+16268099 | None:intergenic |
GTTGTAGTCCTGAGAAGATT+AGG | 0.368435 | 2_1:-16268287 | Msa0197920:CDS |
AGCTGAGTCCGAGAAGAAAA+AGG | 0.368826 | 2_1:-16268193 | Msa0197920:CDS |
GGCTTCTCGGCTTCTTTAGC+GGG | 0.368935 | 2_1:+16268093 | None:intergenic |
TGTGGTCCACCATACTGATT+AGG | 0.374070 | 2_1:+16267829 | None:intergenic |
TGTGCCTCAGATCAGATCTA+TGG | 0.388015 | 2_1:-16268864 | Msa0197920:exon |
GTCAGCTGTCTTGGGCTTCT+CGG | 0.388753 | 2_1:+16268080 | None:intergenic |
TGGAGGTGGGCCGTGTTATG+TGG | 0.393001 | 2_1:-16267761 | Msa0197920:CDS |
GGCATTTGTGGGATCATCAT+AGG | 0.405808 | 2_1:+16267934 | None:intergenic |
TTCTCGGGCTCAGCGGACTT+GGG | 0.416542 | 2_1:+16268159 | None:intergenic |
CCCACAAATGCCACCACCTA+TGG | 0.417785 | 2_1:-16267923 | Msa0197920:CDS |
TTGTAGTCCTGAGAAGATTA+GGG | 0.426247 | 2_1:-16268286 | Msa0197920:CDS |
AGAAATGCTACAAGAAGGTT+AGG | 0.427970 | 2_1:-16268576 | Msa0197920:CDS |
CTCAGCGAAGAAAACGCAAC+AGG | 0.430429 | 2_1:-16267721 | Msa0197920:CDS |
GCCATAGGTGGTGGCATTTG+TGG | 0.434523 | 2_1:+16267922 | None:intergenic |
TATGGGCCGTATGGCCCAAC+AGG | 0.440070 | 2_1:+16267853 | None:intergenic |
GATCAGATCTATGGCTGAAA+AGG | 0.443352 | 2_1:-16268855 | Msa0197920:intron |
CCACCATACTGATTAGGGTA+TGG | 0.446251 | 2_1:+16267835 | None:intergenic |
GGAACATAACACATCCCAAC+TGG | 0.447009 | 2_1:+16267895 | None:intergenic |
CCACCATAGCTATCGTATAC+TGG | 0.450124 | 2_1:+16267781 | None:intergenic |
GGCCCATACCCTAATCAGTA+TGG | 0.453969 | 2_1:-16267838 | Msa0197920:CDS |
CCATAGGTGGTGGCATTTGT+GGG | 0.455573 | 2_1:+16267923 | None:intergenic |
CACCTATGGCGGTTCCAGTT+GGG | 0.463164 | 2_1:-16267909 | Msa0197920:CDS |
TCAGCTGGTTTGGGCTTTGG+CGG | 0.463353 | 2_1:+16268210 | None:intergenic |
CCACCTATGGCGGTTCCAGT+TGG | 0.463360 | 2_1:-16267910 | Msa0197920:CDS |
TATCAAGAGTATTGAAATAG+TGG | 0.464638 | 2_1:-16268235 | Msa0197920:CDS |
TTATTCAGGTGACCATTATG+AGG | 0.467676 | 2_1:-16268621 | Msa0197920:intron |
GGTAGACCTGTTGGGCCATA+CGG | 0.476910 | 2_1:-16267859 | Msa0197920:CDS |
GCTACGAGGGTAGACCTGTT+GGG | 0.482070 | 2_1:-16267867 | Msa0197920:CDS |
TACGATAGCTATGGTGGAGG+TGG | 0.483595 | 2_1:-16267775 | Msa0197920:CDS |
ATAGGCATTGCAGTTGGTGC+AGG | 0.490498 | 2_1:+16267952 | None:intergenic |
GGAGGTGGGCCGTGTTATGT+GGG | 0.492576 | 2_1:-16267760 | Msa0197920:CDS |
TGCTACGAGGGTAGACCTGT+TGG | 0.497672 | 2_1:-16267868 | Msa0197920:CDS |
AAAATTCATACGTTTCATAG+AGG | 0.498578 | 2_1:-16267621 | Msa0197920:three_prime_UTR |
AGCTTGTCCCTAATCTTCTC+AGG | 0.499784 | 2_1:+16268279 | None:intergenic |
CACCATACTGATTAGGGTAT+GGG | 0.504883 | 2_1:+16267836 | None:intergenic |
ATCAACCTTGAGCCTCATAA+TGG | 0.505835 | 2_1:+16268609 | None:intergenic |
GGGCTTCTCGGCTTCTTTAG+CGG | 0.509630 | 2_1:+16268092 | None:intergenic |
GTGGTCCACCATACTGATTA+GGG | 0.511313 | 2_1:+16267830 | None:intergenic |
ACTGGAACCGCCATAGGTGG+TGG | 0.525042 | 2_1:+16267913 | None:intergenic |
AGGGACAAGCTTTGTTACAA+AGG | 0.533858 | 2_1:-16268267 | Msa0197920:CDS |
GTGGGAAATGAAAGTTTATG+AGG | 0.536303 | 2_1:-16267583 | Msa0197920:three_prime_UTR |
TGATTAGGGTATGGGCCGTA+TGG | 0.546802 | 2_1:+16267844 | None:intergenic |
AAGCTTTGTTACAAAGGTGG+AGG | 0.555529 | 2_1:-16268261 | Msa0197920:CDS |
CGCTGAGATATTGATCGCAT+CGG | 0.559500 | 2_1:+16267737 | None:intergenic |
CCAGTATACGATAGCTATGG+TGG | 0.563800 | 2_1:-16267781 | Msa0197920:CDS |
GACAAGCTTTGTTACAAAGG+TGG | 0.583958 | 2_1:-16268264 | Msa0197920:CDS |
ACGATAGCTATGGTGGAGGT+GGG | 0.588196 | 2_1:-16267774 | Msa0197920:CDS |
TCGCATCGGCCCACATAACA+CGG | 0.600233 | 2_1:+16267751 | None:intergenic |
GGTGACCATTATGAGGCTCA+AGG | 0.605189 | 2_1:-16268614 | Msa0197920:CDS |
ATCCCAACTGGAACCGCCAT+AGG | 0.607318 | 2_1:+16267907 | None:intergenic |
TTCAGATAAACCTAAAGATG+CGG | 0.608872 | 2_1:-16268019 | Msa0197920:CDS |
GTGTGAGAAATGCTACAAGA+AGG | 0.610703 | 2_1:-16268581 | Msa0197920:CDS |
ATCATCATAGGCATTGCAGT+TGG | 0.611919 | 2_1:+16267946 | None:intergenic |
GGAAATGAAAGTTTATGAGG+TGG | 0.613155 | 2_1:-16267580 | Msa0197920:three_prime_UTR |
AGACCAGTATACGATAGCTA+TGG | 0.617281 | 2_1:-16267784 | Msa0197920:CDS |
GGTGGACCACAATGTTATGA+CGG | 0.619668 | 2_1:-16267817 | Msa0197920:CDS |
TTATGTTCCACCGTGCTACG+AGG | 0.622137 | 2_1:-16267881 | Msa0197920:CDS |
AGATTGTTGATAGACAGTGT+TGG | 0.629714 | 2_1:+16269027 | None:intergenic |
CCAACTGGAACCGCCATAGG+TGG | 0.630035 | 2_1:+16267910 | None:intergenic |
AGCTTAATACATAAACATGT+AGG | 0.630199 | 2_1:+16268979 | None:intergenic |
ACAAATGCCACCACCTATGG+CGG | 0.640749 | 2_1:-16267920 | Msa0197920:CDS |
ACAGGTCTACCCTCGTAGCA+CGG | 0.650209 | 2_1:+16267871 | None:intergenic |
AGCAAACATTGTGACAATCA+CGG | 0.650689 | 2_1:-16268316 | Msa0197920:CDS |
TATGTTCCACCGTGCTACGA+GGG | 0.654423 | 2_1:-16267880 | Msa0197920:CDS |
TCAGCCATAGATCTGATCTG+AGG | 0.655053 | 2_1:+16268860 | None:intergenic |
TAGGCGTGTAAATCAAAAGA+CGG | 0.656958 | 2_1:-16269172 | None:intergenic |
GTATACGATAGCTATGGTGG+AGG | 0.658092 | 2_1:-16267778 | Msa0197920:CDS |
TCAGCGAAGAAAACGCAACA+GGG | 0.666817 | 2_1:-16267720 | Msa0197920:CDS |
CCATACCCTAATCAGTATGG+TGG | 0.668874 | 2_1:-16267835 | Msa0197920:CDS |
TAGTATCCGTCATAACATTG+TGG | 0.672588 | 2_1:+16267811 | None:intergenic |
GGTCTACCCTCGTAGCACGG+TGG | 0.743664 | 2_1:+16267874 | None:intergenic |
AAACATTGTGACAATCACGG+TGG | 0.804631 | 2_1:-16268313 | Msa0197920:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CAACAATTAAAATTATACAT+AGG | + | chr2_1:16268029-16268048 | None:intergenic | 15.0% |
!!! | TTAATTGTTGATTTTTATTC+AGG | - | chr2_1:16268039-16268058 | Msa0197920:CDS | 15.0% |
!!! | TATTGTTTTATTAGAATTTG+TGG | - | chr2_1:16268199-16268218 | Msa0197920:CDS | 15.0% |
!!! | ATTTTCCAAAAAAATGTAAA+AGG | - | chr2_1:16268255-16268274 | Msa0197920:CDS | 15.0% |
!!! | TATATCCTTTTACATTTTTT+TGG | + | chr2_1:16268263-16268282 | None:intergenic | 15.0% |
!!! | TATAAAATTGAGCTAATTTT+TGG | - | chr2_1:16268279-16268298 | Msa0197920:CDS | 15.0% |
!!! | ATAAAATTGAGCTAATTTTT+GGG | - | chr2_1:16268280-16268299 | Msa0197920:CDS | 15.0% |
!! | AACTTTAGTTATAAAAACAA+AGG | + | chr2_1:16269030-16269049 | None:intergenic | 15.0% |
!! | CAACAATTAAAATTATACAT+AGG | + | chr2_1:16268029-16268048 | None:intergenic | 15.0% |
!!! | TTAATTGTTGATTTTTATTC+AGG | - | chr2_1:16268039-16268058 | Msa0197920:CDS | 15.0% |
!!! | TATTGTTTTATTAGAATTTG+TGG | - | chr2_1:16268199-16268218 | Msa0197920:CDS | 15.0% |
!!! | ATTTTCCAAAAAAATGTAAA+AGG | - | chr2_1:16268255-16268274 | Msa0197920:CDS | 15.0% |
!!! | TATATCCTTTTACATTTTTT+TGG | + | chr2_1:16268263-16268282 | None:intergenic | 15.0% |
!!! | TATAAAATTGAGCTAATTTT+TGG | - | chr2_1:16268279-16268298 | Msa0197920:CDS | 15.0% |
!!! | ATAAAATTGAGCTAATTTTT+GGG | - | chr2_1:16268280-16268299 | Msa0197920:CDS | 15.0% |
!! | AACTTTAGTTATAAAAACAA+AGG | + | chr2_1:16269030-16269049 | None:intergenic | 15.0% |
!!! | GATCTTCAATTCATTTTAAT+TGG | - | chr2_1:16267925-16267944 | Msa0197920:CDS | 20.0% |
!! | AATAAAAGAATAGCATAACA+TGG | + | chr2_1:16267979-16267998 | None:intergenic | 20.0% |
!!! | GATCTTCAATTCATTTTAAT+TGG | - | chr2_1:16267925-16267944 | Msa0197920:CDS | 20.0% |
!! | AATAAAAGAATAGCATAACA+TGG | + | chr2_1:16267979-16267998 | None:intergenic | 20.0% |
! | AGCAAGAAATTCAACTTTAT+AGG | - | chr2_1:16267671-16267690 | Msa0197920:three_prime_UTR | 25.0% |
! | GCAAGAAATTCAACTTTATA+GGG | - | chr2_1:16267672-16267691 | Msa0197920:three_prime_UTR | 25.0% |
! | AGCTTAATACATAAACATGT+AGG | + | chr2_1:16267698-16267717 | None:intergenic | 25.0% |
!!! | GGAAAGATTGATAATTTTGA+TGG | + | chr2_1:16267863-16267882 | None:intergenic | 25.0% |
!! | ATCATAAATTTGTTTCACCA+TGG | - | chr2_1:16268002-16268021 | Msa0197920:CDS | 25.0% |
! | TAAAATTATACATAGGACCA+TGG | + | chr2_1:16268022-16268041 | None:intergenic | 25.0% |
! | ATAGTTAGAAATGAAAGTAG+AGG | + | chr2_1:16268158-16268177 | None:intergenic | 25.0% |
! | TAAAAACACTTGTATGCATT+TGG | - | chr2_1:16268232-16268251 | Msa0197920:CDS | 25.0% |
!!! | TATCAAGAGTATTGAAATAG+TGG | - | chr2_1:16268439-16268458 | Msa0197920:intron | 25.0% |
!! | CAAAAGTAACTTTCTTTTCT+GGG | + | chr2_1:16268619-16268638 | None:intergenic | 25.0% |
!! | ACAAAAGTAACTTTCTTTTC+TGG | + | chr2_1:16268620-16268639 | None:intergenic | 25.0% |
! | AAAATTCATACGTTTCATAG+AGG | - | chr2_1:16269053-16269072 | Msa0197920:five_prime_UTR | 25.0% |
! | TTTCATAGAGGAAAAAAATG+AGG | - | chr2_1:16269065-16269084 | Msa0197920:five_prime_UTR | 25.0% |
! | AGCAAGAAATTCAACTTTAT+AGG | - | chr2_1:16267671-16267690 | Msa0197920:three_prime_UTR | 25.0% |
! | GCAAGAAATTCAACTTTATA+GGG | - | chr2_1:16267672-16267691 | Msa0197920:three_prime_UTR | 25.0% |
! | AGCTTAATACATAAACATGT+AGG | + | chr2_1:16267698-16267717 | None:intergenic | 25.0% |
!!! | GGAAAGATTGATAATTTTGA+TGG | + | chr2_1:16267863-16267882 | None:intergenic | 25.0% |
!! | ATCATAAATTTGTTTCACCA+TGG | - | chr2_1:16268002-16268021 | Msa0197920:CDS | 25.0% |
! | TAAAATTATACATAGGACCA+TGG | + | chr2_1:16268022-16268041 | None:intergenic | 25.0% |
! | ATAGTTAGAAATGAAAGTAG+AGG | + | chr2_1:16268158-16268177 | None:intergenic | 25.0% |
! | TAAAAACACTTGTATGCATT+TGG | - | chr2_1:16268232-16268251 | Msa0197920:CDS | 25.0% |
!!! | TATCAAGAGTATTGAAATAG+TGG | - | chr2_1:16268439-16268458 | Msa0197920:intron | 25.0% |
!! | CAAAAGTAACTTTCTTTTCT+GGG | + | chr2_1:16268619-16268638 | None:intergenic | 25.0% |
!! | ACAAAAGTAACTTTCTTTTC+TGG | + | chr2_1:16268620-16268639 | None:intergenic | 25.0% |
! | AAAATTCATACGTTTCATAG+AGG | - | chr2_1:16269053-16269072 | Msa0197920:five_prime_UTR | 25.0% |
! | TTTCATAGAGGAAAAAAATG+AGG | - | chr2_1:16269065-16269084 | Msa0197920:five_prime_UTR | 25.0% |
!!! | TTATGTGTTGTTTTGGAGAT+AGG | + | chr2_1:16267884-16267903 | None:intergenic | 30.0% |
!!! | GTGACAATTATGTGTTGTTT+TGG | + | chr2_1:16267891-16267910 | None:intergenic | 30.0% |
! | TTGCTTTGACATCATACTTT+TGG | + | chr2_1:16268343-16268362 | None:intergenic | 30.0% |
TTCAGATAAACCTAAAGATG+CGG | - | chr2_1:16268655-16268674 | Msa0197920:intron | 30.0% | |
!!! | TTATGTGTTGTTTTGGAGAT+AGG | + | chr2_1:16267884-16267903 | None:intergenic | 30.0% |
!!! | GTGACAATTATGTGTTGTTT+TGG | + | chr2_1:16267891-16267910 | None:intergenic | 30.0% |
! | TTGCTTTGACATCATACTTT+TGG | + | chr2_1:16268343-16268362 | None:intergenic | 30.0% |
TTCAGATAAACCTAAAGATG+CGG | - | chr2_1:16268655-16268674 | Msa0197920:intron | 30.0% | |
! | GGTTTTTGCTAGAACTGAAA+GGG | + | chr2_1:16267629-16267648 | None:intergenic | 35.0% |
! | TGGTTTTTGCTAGAACTGAA+AGG | + | chr2_1:16267630-16267649 | None:intergenic | 35.0% |
! | AGATTGTTGATAGACAGTGT+TGG | + | chr2_1:16267650-16267669 | None:intergenic | 35.0% |
TTATTCAGGTGACCATTATG+AGG | - | chr2_1:16268053-16268072 | Msa0197920:CDS | 35.0% | |
AGAAATGCTACAAGAAGGTT+AGG | - | chr2_1:16268098-16268117 | Msa0197920:CDS | 35.0% | |
AGCAAACATTGTGACAATCA+CGG | - | chr2_1:16268358-16268377 | Msa0197920:intron | 35.0% | |
TTGTAGTCCTGAGAAGATTA+GGG | - | chr2_1:16268388-16268407 | Msa0197920:intron | 35.0% | |
GAACCAGAGAAGAAAAAAGA+AGG | - | chr2_1:16268545-16268564 | Msa0197920:intron | 35.0% | |
TAGTATCCGTCATAACATTG+TGG | + | chr2_1:16268866-16268885 | None:intergenic | 35.0% | |
CATAGAGGAAAAAAATGAGG+CGG | - | chr2_1:16269068-16269087 | Msa0197920:five_prime_UTR | 35.0% | |
ATAGAGGAAAAAAATGAGGC+GGG | - | chr2_1:16269069-16269088 | Msa0197920:five_prime_UTR | 35.0% | |
GTGGGAAATGAAAGTTTATG+AGG | - | chr2_1:16269091-16269110 | Msa0197920:five_prime_UTR | 35.0% | |
GGAAATGAAAGTTTATGAGG+TGG | - | chr2_1:16269094-16269113 | Msa0197920:five_prime_UTR | 35.0% | |
! | GGTTTTTGCTAGAACTGAAA+GGG | + | chr2_1:16267629-16267648 | None:intergenic | 35.0% |
! | TGGTTTTTGCTAGAACTGAA+AGG | + | chr2_1:16267630-16267649 | None:intergenic | 35.0% |
! | AGATTGTTGATAGACAGTGT+TGG | + | chr2_1:16267650-16267669 | None:intergenic | 35.0% |
TTATTCAGGTGACCATTATG+AGG | - | chr2_1:16268053-16268072 | Msa0197920:CDS | 35.0% | |
AGAAATGCTACAAGAAGGTT+AGG | - | chr2_1:16268098-16268117 | Msa0197920:CDS | 35.0% | |
AGCAAACATTGTGACAATCA+CGG | - | chr2_1:16268358-16268377 | Msa0197920:intron | 35.0% | |
TTGTAGTCCTGAGAAGATTA+GGG | - | chr2_1:16268388-16268407 | Msa0197920:intron | 35.0% | |
GAACCAGAGAAGAAAAAAGA+AGG | - | chr2_1:16268545-16268564 | Msa0197920:intron | 35.0% | |
TAGTATCCGTCATAACATTG+TGG | + | chr2_1:16268866-16268885 | None:intergenic | 35.0% | |
CATAGAGGAAAAAAATGAGG+CGG | - | chr2_1:16269068-16269087 | Msa0197920:five_prime_UTR | 35.0% | |
ATAGAGGAAAAAAATGAGGC+GGG | - | chr2_1:16269069-16269088 | Msa0197920:five_prime_UTR | 35.0% | |
GTGGGAAATGAAAGTTTATG+AGG | - | chr2_1:16269091-16269110 | Msa0197920:five_prime_UTR | 35.0% | |
GGAAATGAAAGTTTATGAGG+TGG | - | chr2_1:16269094-16269113 | Msa0197920:five_prime_UTR | 35.0% | |
AGCAGAGCAACAACACAAAA+TGG | + | chr2_1:16267758-16267777 | None:intergenic | 40.0% | |
GATCAGATCTATGGCTGAAA+AGG | - | chr2_1:16267819-16267838 | Msa0197920:CDS | 40.0% | |
ATCAACCTTGAGCCTCATAA+TGG | + | chr2_1:16268068-16268087 | None:intergenic | 40.0% | |
GTGTGAGAAATGCTACAAGA+AGG | - | chr2_1:16268093-16268112 | Msa0197920:CDS | 40.0% | |
AAACATTGTGACAATCACGG+TGG | - | chr2_1:16268361-16268380 | Msa0197920:intron | 40.0% | |
GTTGTAGTCCTGAGAAGATT+AGG | - | chr2_1:16268387-16268406 | Msa0197920:intron | 40.0% | |
!! | AGGGACAAGCTTTGTTACAA+AGG | - | chr2_1:16268407-16268426 | Msa0197920:intron | 40.0% |
!! | GACAAGCTTTGTTACAAAGG+TGG | - | chr2_1:16268410-16268429 | Msa0197920:intron | 40.0% |
!! | AAGCTTTGTTACAAAGGTGG+AGG | - | chr2_1:16268413-16268432 | Msa0197920:intron | 40.0% |
!! | TCTGGTTCCTTTTTCTTCTC+GGG | + | chr2_1:16268533-16268552 | None:intergenic | 40.0% |
!! | CTCTGGTTCCTTTTTCTTCT+CGG | + | chr2_1:16268534-16268553 | None:intergenic | 40.0% |
!!! | TCGCCTTCTTTTTTCTTCTC+TGG | + | chr2_1:16268551-16268570 | None:intergenic | 40.0% |
! | ATCATCATAGGCATTGCAGT+TGG | + | chr2_1:16268731-16268750 | None:intergenic | 40.0% |
! | CACCATACTGATTAGGGTAT+GGG | + | chr2_1:16268841-16268860 | None:intergenic | 40.0% |
AGACCAGTATACGATAGCTA+TGG | - | chr2_1:16268890-16268909 | Msa0197920:five_prime_UTR | 40.0% | |
AGCAGAGCAACAACACAAAA+TGG | + | chr2_1:16267758-16267777 | None:intergenic | 40.0% | |
GATCAGATCTATGGCTGAAA+AGG | - | chr2_1:16267819-16267838 | Msa0197920:CDS | 40.0% | |
ATCAACCTTGAGCCTCATAA+TGG | + | chr2_1:16268068-16268087 | None:intergenic | 40.0% | |
GTGTGAGAAATGCTACAAGA+AGG | - | chr2_1:16268093-16268112 | Msa0197920:CDS | 40.0% | |
AAACATTGTGACAATCACGG+TGG | - | chr2_1:16268361-16268380 | Msa0197920:intron | 40.0% | |
GTTGTAGTCCTGAGAAGATT+AGG | - | chr2_1:16268387-16268406 | Msa0197920:intron | 40.0% | |
!! | AGGGACAAGCTTTGTTACAA+AGG | - | chr2_1:16268407-16268426 | Msa0197920:intron | 40.0% |
!! | GACAAGCTTTGTTACAAAGG+TGG | - | chr2_1:16268410-16268429 | Msa0197920:intron | 40.0% |
!! | AAGCTTTGTTACAAAGGTGG+AGG | - | chr2_1:16268413-16268432 | Msa0197920:intron | 40.0% |
!! | TCTGGTTCCTTTTTCTTCTC+GGG | + | chr2_1:16268533-16268552 | None:intergenic | 40.0% |
!! | CTCTGGTTCCTTTTTCTTCT+CGG | + | chr2_1:16268534-16268553 | None:intergenic | 40.0% |
!!! | TCGCCTTCTTTTTTCTTCTC+TGG | + | chr2_1:16268551-16268570 | None:intergenic | 40.0% |
! | ATCATCATAGGCATTGCAGT+TGG | + | chr2_1:16268731-16268750 | None:intergenic | 40.0% |
! | CACCATACTGATTAGGGTAT+GGG | + | chr2_1:16268841-16268860 | None:intergenic | 40.0% |
AGACCAGTATACGATAGCTA+TGG | - | chr2_1:16268890-16268909 | Msa0197920:five_prime_UTR | 40.0% | |
TGTGCCTCAGATCAGATCTA+TGG | - | chr2_1:16267810-16267829 | Msa0197920:CDS | 45.0% | |
TCAGCCATAGATCTGATCTG+AGG | + | chr2_1:16267817-16267836 | None:intergenic | 45.0% | |
TAGAGGTGATGAACTCACGA+GGG | + | chr2_1:16268141-16268160 | None:intergenic | 45.0% | |
AGCTTGTCCCTAATCTTCTC+AGG | + | chr2_1:16268398-16268417 | None:intergenic | 45.0% | |
! | TTTTTCTTCTCGGACTCAGC+TGG | + | chr2_1:16268482-16268501 | None:intergenic | 45.0% |
AGCTGAGTCCGAGAAGAAAA+AGG | - | chr2_1:16268481-16268500 | Msa0197920:intron | 45.0% | |
GAGTCCGAGAAGAAAAAGGA+AGG | - | chr2_1:16268485-16268504 | Msa0197920:intron | 45.0% | |
! | CTCGCCTTCCTTTTTCTTCT+CGG | + | chr2_1:16268492-16268511 | None:intergenic | 45.0% |
! | TTTTCTGGGTCAGCTGTCTT+GGG | + | chr2_1:16268605-16268624 | None:intergenic | 45.0% |
! | TTGGGCTTTTCCGCATCTTT+AGG | + | chr2_1:16268668-16268687 | None:intergenic | 45.0% |
! | TCTTTGGGCTTTTCAGCTTC+AGG | + | chr2_1:16268698-16268717 | None:intergenic | 45.0% |
GGCATTTGTGGGATCATCAT+AGG | + | chr2_1:16268743-16268762 | None:intergenic | 45.0% | |
GGAACATAACACATCCCAAC+TGG | + | chr2_1:16268782-16268801 | None:intergenic | 45.0% | |
! | CCACCATACTGATTAGGGTA+TGG | + | chr2_1:16268842-16268861 | None:intergenic | 45.0% |
CCATACCCTAATCAGTATGG+TGG | - | chr2_1:16268839-16268858 | Msa0197920:intron | 45.0% | |
! | GTGGTCCACCATACTGATTA+GGG | + | chr2_1:16268847-16268866 | None:intergenic | 45.0% |
! | TGTGGTCCACCATACTGATT+AGG | + | chr2_1:16268848-16268867 | None:intergenic | 45.0% |
GGTGGACCACAATGTTATGA+CGG | - | chr2_1:16268857-16268876 | Msa0197920:exon | 45.0% | |
CCACCATAGCTATCGTATAC+TGG | + | chr2_1:16268896-16268915 | None:intergenic | 45.0% | |
CCAGTATACGATAGCTATGG+TGG | - | chr2_1:16268893-16268912 | Msa0197920:five_prime_UTR | 45.0% | |
GTATACGATAGCTATGGTGG+AGG | - | chr2_1:16268896-16268915 | Msa0197920:five_prime_UTR | 45.0% | |
CGCTGAGATATTGATCGCAT+CGG | + | chr2_1:16268940-16268959 | None:intergenic | 45.0% | |
TCAGCGAAGAAAACGCAACA+GGG | - | chr2_1:16268954-16268973 | Msa0197920:five_prime_UTR | 45.0% | |
AGGAAAAAAATGAGGCGGGT+GGG | - | chr2_1:16269073-16269092 | Msa0197920:five_prime_UTR | 45.0% | |
TGTGCCTCAGATCAGATCTA+TGG | - | chr2_1:16267810-16267829 | Msa0197920:CDS | 45.0% | |
TCAGCCATAGATCTGATCTG+AGG | + | chr2_1:16267817-16267836 | None:intergenic | 45.0% | |
TAGAGGTGATGAACTCACGA+GGG | + | chr2_1:16268141-16268160 | None:intergenic | 45.0% | |
AGCTTGTCCCTAATCTTCTC+AGG | + | chr2_1:16268398-16268417 | None:intergenic | 45.0% | |
! | TTTTTCTTCTCGGACTCAGC+TGG | + | chr2_1:16268482-16268501 | None:intergenic | 45.0% |
AGCTGAGTCCGAGAAGAAAA+AGG | - | chr2_1:16268481-16268500 | Msa0197920:intron | 45.0% | |
GAGTCCGAGAAGAAAAAGGA+AGG | - | chr2_1:16268485-16268504 | Msa0197920:intron | 45.0% | |
! | CTCGCCTTCCTTTTTCTTCT+CGG | + | chr2_1:16268492-16268511 | None:intergenic | 45.0% |
! | TTTTCTGGGTCAGCTGTCTT+GGG | + | chr2_1:16268605-16268624 | None:intergenic | 45.0% |
! | TTGGGCTTTTCCGCATCTTT+AGG | + | chr2_1:16268668-16268687 | None:intergenic | 45.0% |
! | TCTTTGGGCTTTTCAGCTTC+AGG | + | chr2_1:16268698-16268717 | None:intergenic | 45.0% |
GGCATTTGTGGGATCATCAT+AGG | + | chr2_1:16268743-16268762 | None:intergenic | 45.0% | |
GGAACATAACACATCCCAAC+TGG | + | chr2_1:16268782-16268801 | None:intergenic | 45.0% | |
! | CCACCATACTGATTAGGGTA+TGG | + | chr2_1:16268842-16268861 | None:intergenic | 45.0% |
CCATACCCTAATCAGTATGG+TGG | - | chr2_1:16268839-16268858 | Msa0197920:intron | 45.0% | |
! | GTGGTCCACCATACTGATTA+GGG | + | chr2_1:16268847-16268866 | None:intergenic | 45.0% |
! | TGTGGTCCACCATACTGATT+AGG | + | chr2_1:16268848-16268867 | None:intergenic | 45.0% |
GGTGGACCACAATGTTATGA+CGG | - | chr2_1:16268857-16268876 | Msa0197920:exon | 45.0% | |
CCACCATAGCTATCGTATAC+TGG | + | chr2_1:16268896-16268915 | None:intergenic | 45.0% | |
CCAGTATACGATAGCTATGG+TGG | - | chr2_1:16268893-16268912 | Msa0197920:five_prime_UTR | 45.0% | |
GTATACGATAGCTATGGTGG+AGG | - | chr2_1:16268896-16268915 | Msa0197920:five_prime_UTR | 45.0% | |
CGCTGAGATATTGATCGCAT+CGG | + | chr2_1:16268940-16268959 | None:intergenic | 45.0% | |
TCAGCGAAGAAAACGCAACA+GGG | - | chr2_1:16268954-16268973 | Msa0197920:five_prime_UTR | 45.0% | |
AGGAAAAAAATGAGGCGGGT+GGG | - | chr2_1:16269073-16269092 | Msa0197920:five_prime_UTR | 45.0% | |
GGTGACCATTATGAGGCTCA+AGG | - | chr2_1:16268060-16268079 | Msa0197920:CDS | 50.0% | |
GTAGAGGTGATGAACTCACG+AGG | + | chr2_1:16268142-16268161 | None:intergenic | 50.0% | |
! | TTCTCGGACTCAGCTGGTTT+GGG | + | chr2_1:16268476-16268495 | None:intergenic | 50.0% |
! | CTTTTTCTTCTCGGGCTCAG+CGG | + | chr2_1:16268525-16268544 | None:intergenic | 50.0% |
! | CTTTTCTGGGTCAGCTGTCT+TGG | + | chr2_1:16268606-16268625 | None:intergenic | 50.0% |
! | TCAGCTTCAGGCTTTGGCTT+GGG | + | chr2_1:16268686-16268705 | None:intergenic | 50.0% |
! | TTCAGCTTCAGGCTTTGGCT+TGG | + | chr2_1:16268687-16268706 | None:intergenic | 50.0% |
! | GGCTTTTCAGCTTCAGGCTT+TGG | + | chr2_1:16268692-16268711 | None:intergenic | 50.0% |
GTTGGTGCAGGCTTGTCTTT+GGG | + | chr2_1:16268713-16268732 | None:intergenic | 50.0% | |
! | AGTTGGTGCAGGCTTGTCTT+TGG | + | chr2_1:16268714-16268733 | None:intergenic | 50.0% |
! | ATAGGCATTGCAGTTGGTGC+AGG | + | chr2_1:16268725-16268744 | None:intergenic | 50.0% |
! | CCATAGGTGGTGGCATTTGT+GGG | + | chr2_1:16268754-16268773 | None:intergenic | 50.0% |
ACAAATGCCACCACCTATGG+CGG | - | chr2_1:16268754-16268773 | Msa0197920:intron | 50.0% | |
TTATGTTCCACCGTGCTACG+AGG | - | chr2_1:16268793-16268812 | Msa0197920:intron | 50.0% | |
TATGTTCCACCGTGCTACGA+GGG | - | chr2_1:16268794-16268813 | Msa0197920:intron | 50.0% | |
TGATTAGGGTATGGGCCGTA+TGG | + | chr2_1:16268833-16268852 | None:intergenic | 50.0% | |
GGCCCATACCCTAATCAGTA+TGG | - | chr2_1:16268836-16268855 | Msa0197920:intron | 50.0% | |
! | TACGATAGCTATGGTGGAGG+TGG | - | chr2_1:16268899-16268918 | Msa0197920:five_prime_UTR | 50.0% |
! | ACGATAGCTATGGTGGAGGT+GGG | - | chr2_1:16268900-16268919 | Msa0197920:five_prime_UTR | 50.0% |
CTCAGCGAAGAAAACGCAAC+AGG | - | chr2_1:16268953-16268972 | Msa0197920:five_prime_UTR | 50.0% | |
GAGGAAAAAAATGAGGCGGG+TGG | - | chr2_1:16269072-16269091 | Msa0197920:five_prime_UTR | 50.0% | |
GGTGACCATTATGAGGCTCA+AGG | - | chr2_1:16268060-16268079 | Msa0197920:CDS | 50.0% | |
GTAGAGGTGATGAACTCACG+AGG | + | chr2_1:16268142-16268161 | None:intergenic | 50.0% | |
! | TTCTCGGACTCAGCTGGTTT+GGG | + | chr2_1:16268476-16268495 | None:intergenic | 50.0% |
! | CTTTTTCTTCTCGGGCTCAG+CGG | + | chr2_1:16268525-16268544 | None:intergenic | 50.0% |
! | CTTTTCTGGGTCAGCTGTCT+TGG | + | chr2_1:16268606-16268625 | None:intergenic | 50.0% |
! | TCAGCTTCAGGCTTTGGCTT+GGG | + | chr2_1:16268686-16268705 | None:intergenic | 50.0% |
! | TTCAGCTTCAGGCTTTGGCT+TGG | + | chr2_1:16268687-16268706 | None:intergenic | 50.0% |
! | GGCTTTTCAGCTTCAGGCTT+TGG | + | chr2_1:16268692-16268711 | None:intergenic | 50.0% |
GTTGGTGCAGGCTTGTCTTT+GGG | + | chr2_1:16268713-16268732 | None:intergenic | 50.0% | |
! | AGTTGGTGCAGGCTTGTCTT+TGG | + | chr2_1:16268714-16268733 | None:intergenic | 50.0% |
! | ATAGGCATTGCAGTTGGTGC+AGG | + | chr2_1:16268725-16268744 | None:intergenic | 50.0% |
! | CCATAGGTGGTGGCATTTGT+GGG | + | chr2_1:16268754-16268773 | None:intergenic | 50.0% |
ACAAATGCCACCACCTATGG+CGG | - | chr2_1:16268754-16268773 | Msa0197920:intron | 50.0% | |
TTATGTTCCACCGTGCTACG+AGG | - | chr2_1:16268793-16268812 | Msa0197920:intron | 50.0% | |
TATGTTCCACCGTGCTACGA+GGG | - | chr2_1:16268794-16268813 | Msa0197920:intron | 50.0% | |
TGATTAGGGTATGGGCCGTA+TGG | + | chr2_1:16268833-16268852 | None:intergenic | 50.0% | |
GGCCCATACCCTAATCAGTA+TGG | - | chr2_1:16268836-16268855 | Msa0197920:intron | 50.0% | |
! | TACGATAGCTATGGTGGAGG+TGG | - | chr2_1:16268899-16268918 | Msa0197920:five_prime_UTR | 50.0% |
! | ACGATAGCTATGGTGGAGGT+GGG | - | chr2_1:16268900-16268919 | Msa0197920:five_prime_UTR | 50.0% |
CTCAGCGAAGAAAACGCAAC+AGG | - | chr2_1:16268953-16268972 | Msa0197920:five_prime_UTR | 50.0% | |
GAGGAAAAAAATGAGGCGGG+TGG | - | chr2_1:16269072-16269091 | Msa0197920:five_prime_UTR | 50.0% | |
!! | TCAGCTGGTTTGGGCTTTGG+CGG | + | chr2_1:16268467-16268486 | None:intergenic | 55.0% |
!! | GACTCAGCTGGTTTGGGCTT+TGG | + | chr2_1:16268470-16268489 | None:intergenic | 55.0% |
CTTCTCGGACTCAGCTGGTT+TGG | + | chr2_1:16268477-16268496 | None:intergenic | 55.0% | |
CGCTGAGCCCGAGAAGAAAA+AGG | - | chr2_1:16268523-16268542 | Msa0197920:intron | 55.0% | |
!! | TCGGCTTCTTTAGCGGGCTT+GGG | + | chr2_1:16268578-16268597 | None:intergenic | 55.0% |
GGCTTCTCGGCTTCTTTAGC+GGG | + | chr2_1:16268584-16268603 | None:intergenic | 55.0% | |
GGGCTTCTCGGCTTCTTTAG+CGG | + | chr2_1:16268585-16268604 | None:intergenic | 55.0% | |
GTCAGCTGTCTTGGGCTTCT+CGG | + | chr2_1:16268597-16268616 | None:intergenic | 55.0% | |
CCCACAAATGCCACCACCTA+TGG | - | chr2_1:16268751-16268770 | Msa0197920:intron | 55.0% | |
! | GCCATAGGTGGTGGCATTTG+TGG | + | chr2_1:16268755-16268774 | None:intergenic | 55.0% |
CACCTATGGCGGTTCCAGTT+GGG | - | chr2_1:16268765-16268784 | Msa0197920:intron | 55.0% | |
ATCCCAACTGGAACCGCCAT+AGG | + | chr2_1:16268770-16268789 | None:intergenic | 55.0% | |
ACAGGTCTACCCTCGTAGCA+CGG | + | chr2_1:16268806-16268825 | None:intergenic | 55.0% | |
TGCTACGAGGGTAGACCTGT+TGG | - | chr2_1:16268806-16268825 | Msa0197920:intron | 55.0% | |
GCTACGAGGGTAGACCTGTT+GGG | - | chr2_1:16268807-16268826 | Msa0197920:intron | 55.0% | |
GGTAGACCTGTTGGGCCATA+CGG | - | chr2_1:16268815-16268834 | Msa0197920:intron | 55.0% | |
! | TCGCATCGGCCCACATAACA+CGG | + | chr2_1:16268926-16268945 | None:intergenic | 55.0% |
!! | TCAGCTGGTTTGGGCTTTGG+CGG | + | chr2_1:16268467-16268486 | None:intergenic | 55.0% |
!! | GACTCAGCTGGTTTGGGCTT+TGG | + | chr2_1:16268470-16268489 | None:intergenic | 55.0% |
CTTCTCGGACTCAGCTGGTT+TGG | + | chr2_1:16268477-16268496 | None:intergenic | 55.0% | |
CGCTGAGCCCGAGAAGAAAA+AGG | - | chr2_1:16268523-16268542 | Msa0197920:intron | 55.0% | |
!! | TCGGCTTCTTTAGCGGGCTT+GGG | + | chr2_1:16268578-16268597 | None:intergenic | 55.0% |
GGCTTCTCGGCTTCTTTAGC+GGG | + | chr2_1:16268584-16268603 | None:intergenic | 55.0% | |
GGGCTTCTCGGCTTCTTTAG+CGG | + | chr2_1:16268585-16268604 | None:intergenic | 55.0% | |
GTCAGCTGTCTTGGGCTTCT+CGG | + | chr2_1:16268597-16268616 | None:intergenic | 55.0% | |
CCCACAAATGCCACCACCTA+TGG | - | chr2_1:16268751-16268770 | Msa0197920:intron | 55.0% | |
! | GCCATAGGTGGTGGCATTTG+TGG | + | chr2_1:16268755-16268774 | None:intergenic | 55.0% |
CACCTATGGCGGTTCCAGTT+GGG | - | chr2_1:16268765-16268784 | Msa0197920:intron | 55.0% | |
ATCCCAACTGGAACCGCCAT+AGG | + | chr2_1:16268770-16268789 | None:intergenic | 55.0% | |
ACAGGTCTACCCTCGTAGCA+CGG | + | chr2_1:16268806-16268825 | None:intergenic | 55.0% | |
TGCTACGAGGGTAGACCTGT+TGG | - | chr2_1:16268806-16268825 | Msa0197920:intron | 55.0% | |
GCTACGAGGGTAGACCTGTT+GGG | - | chr2_1:16268807-16268826 | Msa0197920:intron | 55.0% | |
GGTAGACCTGTTGGGCCATA+CGG | - | chr2_1:16268815-16268834 | Msa0197920:intron | 55.0% | |
! | TCGCATCGGCCCACATAACA+CGG | + | chr2_1:16268926-16268945 | None:intergenic | 55.0% |
! | TTCTCGGGCTCAGCGGACTT+GGG | + | chr2_1:16268518-16268537 | None:intergenic | 60.0% |
!! | CTCGGCTTCTTTAGCGGGCT+TGG | + | chr2_1:16268579-16268598 | None:intergenic | 60.0% |
ACTGGAACCGCCATAGGTGG+TGG | + | chr2_1:16268764-16268783 | None:intergenic | 60.0% | |
CCAACTGGAACCGCCATAGG+TGG | + | chr2_1:16268767-16268786 | None:intergenic | 60.0% | |
CCACCTATGGCGGTTCCAGT+TGG | - | chr2_1:16268764-16268783 | Msa0197920:intron | 60.0% | |
TATGGGCCGTATGGCCCAAC+AGG | + | chr2_1:16268824-16268843 | None:intergenic | 60.0% | |
TGGAGGTGGGCCGTGTTATG+TGG | - | chr2_1:16268913-16268932 | Msa0197920:five_prime_UTR | 60.0% | |
GGAGGTGGGCCGTGTTATGT+GGG | - | chr2_1:16268914-16268933 | Msa0197920:five_prime_UTR | 60.0% | |
! | TTCTCGGGCTCAGCGGACTT+GGG | + | chr2_1:16268518-16268537 | None:intergenic | 60.0% |
!! | CTCGGCTTCTTTAGCGGGCT+TGG | + | chr2_1:16268579-16268598 | None:intergenic | 60.0% |
ACTGGAACCGCCATAGGTGG+TGG | + | chr2_1:16268764-16268783 | None:intergenic | 60.0% | |
CCAACTGGAACCGCCATAGG+TGG | + | chr2_1:16268767-16268786 | None:intergenic | 60.0% | |
CCACCTATGGCGGTTCCAGT+TGG | - | chr2_1:16268764-16268783 | Msa0197920:intron | 60.0% | |
TATGGGCCGTATGGCCCAAC+AGG | + | chr2_1:16268824-16268843 | None:intergenic | 60.0% | |
TGGAGGTGGGCCGTGTTATG+TGG | - | chr2_1:16268913-16268932 | Msa0197920:five_prime_UTR | 60.0% | |
GGAGGTGGGCCGTGTTATGT+GGG | - | chr2_1:16268914-16268933 | Msa0197920:five_prime_UTR | 60.0% | |
! | CTTCTCGGGCTCAGCGGACT+TGG | + | chr2_1:16268519-16268538 | None:intergenic | 65.0% |
GGTCTACCCTCGTAGCACGG+TGG | + | chr2_1:16268803-16268822 | None:intergenic | 65.0% | |
! | CTTCTCGGGCTCAGCGGACT+TGG | + | chr2_1:16268519-16268538 | None:intergenic | 65.0% |
GGTCTACCCTCGTAGCACGG+TGG | + | chr2_1:16268803-16268822 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_1 | gene | 16267508 | 16269188 | 16267508 | ID=Msa0197920;Name=Msa0197920 |
chr2_1 | mRNA | 16267508 | 16269188 | 16267508 | ID=Msa0197920-mRNA-1;Parent=Msa0197920;Name=Msa0197920-mRNA-1;_AED=0.10;_eAED=0.10;_QI=321|1|1|1|1|1|3|197|251 |
chr2_1 | exon | 16267508 | 16268366 | 16267508 | ID=Msa0197920-mRNA-1:exon:6767;Parent=Msa0197920-mRNA-1 |
chr2_1 | exon | 16268554 | 16268635 | 16268554 | ID=Msa0197920-mRNA-1:exon:6766;Parent=Msa0197920-mRNA-1 |
chr2_1 | exon | 16268856 | 16269188 | 16268856 | ID=Msa0197920-mRNA-1:exon:6765;Parent=Msa0197920-mRNA-1 |
chr2_1 | five_prime_UTR | 16268868 | 16269188 | 16268868 | ID=Msa0197920-mRNA-1:five_prime_utr;Parent=Msa0197920-mRNA-1 |
chr2_1 | CDS | 16268856 | 16268867 | 16268856 | ID=Msa0197920-mRNA-1:cds;Parent=Msa0197920-mRNA-1 |
chr2_1 | CDS | 16268554 | 16268635 | 16268554 | ID=Msa0197920-mRNA-1:cds;Parent=Msa0197920-mRNA-1 |
chr2_1 | CDS | 16267705 | 16268366 | 16267705 | ID=Msa0197920-mRNA-1:cds;Parent=Msa0197920-mRNA-1 |
chr2_1 | three_prime_UTR | 16267508 | 16267704 | 16267508 | ID=Msa0197920-mRNA-1:three_prime_utr;Parent=Msa0197920-mRNA-1 |
Gene Sequence |
Protein sequence |