Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066800.t1 | AES72095.1 | 94.6 | 222 | 11 | 1 | 1 | 222 | 1 | 221 | 7.10E-112 | 413.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066800.t1 | P09887 | 37.8 | 185 | 101 | 4 | 39 | 222 | 10 | 181 | 7.1e-28 | 125.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066800.t1 | G7J2I8 | 94.6 | 222 | 11 | 1 | 1 | 222 | 1 | 221 | 5.1e-112 | 413.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene066800 | 0.837366 | 5.42E-57 | -1.69E-46 |
| MS.gene049171 | MS.gene066800 | 0.82863 | 8.08E-55 | -1.69E-46 |
| MS.gene049217 | MS.gene066800 | 0.80899 | 2.36E-50 | -1.69E-46 |
| MS.gene049222 | MS.gene066800 | 0.866234 | 3.31E-65 | -1.69E-46 |
| MS.gene049232 | MS.gene066800 | 0.817919 | 2.57E-52 | -1.69E-46 |
| MS.gene049285 | MS.gene066800 | 0.832754 | 7.89E-56 | -1.69E-46 |
| MS.gene049320 | MS.gene066800 | 0.840351 | 9.16E-58 | -1.69E-46 |
| MS.gene049356 | MS.gene066800 | 0.805414 | 1.35E-49 | -1.69E-46 |
| MS.gene049369 | MS.gene066800 | 0.81319 | 2.90E-51 | -1.69E-46 |
| MS.gene049396 | MS.gene066800 | 0.865118 | 7.45E-65 | -1.69E-46 |
| MS.gene049427 | MS.gene066800 | 0.817124 | 3.88E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene066800 | 0.89166 | 3.24E-74 | -1.69E-46 |
| MS.gene049633 | MS.gene066800 | 0.827848 | 1.25E-54 | -1.69E-46 |
| MS.gene049805 | MS.gene066800 | 0.857654 | 1.41E-62 | -1.69E-46 |
| MS.gene05010 | MS.gene066800 | 0.810287 | 1.24E-50 | -1.69E-46 |
| MS.gene050170 | MS.gene066800 | 0.814919 | 1.21E-51 | -1.69E-46 |
| MS.gene050323 | MS.gene066800 | 0.816384 | 5.69E-52 | -1.69E-46 |
| MS.gene050499 | MS.gene066800 | 0.813326 | 2.71E-51 | -1.69E-46 |
| MS.gene050502 | MS.gene066800 | 0.851347 | 9.41E-61 | -1.69E-46 |
| MS.gene050504 | MS.gene066800 | 0.807888 | 4.06E-50 | -1.69E-46 |
| MS.gene050518 | MS.gene066800 | 0.820748 | 5.82E-53 | -1.69E-46 |
| MS.gene050538 | MS.gene066800 | 0.875092 | 4.04E-68 | -1.69E-46 |
| MS.gene050577 | MS.gene066800 | 0.834528 | 2.85E-56 | -1.69E-46 |
| MS.gene050593 | MS.gene066800 | 0.848522 | 5.81E-60 | -1.69E-46 |
| MS.gene050612 | MS.gene066800 | 0.813696 | 2.25E-51 | -1.69E-46 |
| MS.gene050670 | MS.gene066800 | 0.817127 | 3.87E-52 | -1.69E-46 |
| MS.gene050686 | MS.gene066800 | 0.823115 | 1.65E-53 | -1.69E-46 |
| MS.gene050699 | MS.gene066800 | 0.819698 | 1.01E-52 | -1.69E-46 |
| MS.gene050747 | MS.gene066800 | 0.888132 | 7.74E-73 | -1.69E-46 |
| MS.gene050772 | MS.gene066800 | 0.891545 | 3.60E-74 | -1.69E-46 |
| MS.gene05080 | MS.gene066800 | 0.856391 | 3.32E-62 | -1.69E-46 |
| MS.gene05081 | MS.gene066800 | 0.818786 | 1.63E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene066800 | 0.826802 | 2.22E-54 | -1.69E-46 |
| MS.gene050871 | MS.gene066800 | 0.825412 | 4.75E-54 | -1.69E-46 |
| MS.gene050950 | MS.gene066800 | 0.878716 | 2.24E-69 | -1.69E-46 |
| MS.gene05100 | MS.gene066800 | 0.801637 | 8.20E-49 | -1.69E-46 |
| MS.gene05105 | MS.gene066800 | 0.853325 | 2.57E-61 | -1.69E-46 |
| MS.gene051387 | MS.gene066800 | 0.837451 | 5.16E-57 | -1.69E-46 |
| MS.gene051551 | MS.gene066800 | 0.810511 | 1.11E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene066800 | 0.871768 | 5.31E-67 | -1.69E-46 |
| MS.gene051734 | MS.gene066800 | 0.821027 | 5.02E-53 | -1.69E-46 |
| MS.gene051838 | MS.gene066800 | 0.856709 | 2.68E-62 | -1.69E-46 |
| MS.gene051858 | MS.gene066800 | 0.805816 | 1.11E-49 | -1.69E-46 |
| MS.gene052136 | MS.gene066800 | 0.809335 | 1.99E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene066800 | 0.855097 | 7.93E-62 | -1.69E-46 |
| MS.gene052346 | MS.gene066800 | 0.855978 | 4.39E-62 | -1.69E-46 |
| MS.gene052414 | MS.gene066800 | 0.865051 | 7.81E-65 | -1.69E-46 |
| MS.gene052421 | MS.gene066800 | 0.844583 | 6.91E-59 | -1.69E-46 |
| MS.gene052481 | MS.gene066800 | 0.831458 | 1.65E-55 | -1.69E-46 |
| MS.gene052482 | MS.gene066800 | 0.819742 | 9.90E-53 | -1.69E-46 |
| MS.gene052484 | MS.gene066800 | 0.828105 | 1.08E-54 | -1.69E-46 |
| MS.gene052486 | MS.gene066800 | 0.825955 | 3.53E-54 | -1.69E-46 |
| MS.gene052501 | MS.gene066800 | 0.871201 | 8.18E-67 | -1.69E-46 |
| MS.gene052503 | MS.gene066800 | 0.869558 | 2.83E-66 | -1.69E-46 |
| MS.gene052505 | MS.gene066800 | 0.864767 | 9.59E-65 | -1.69E-46 |
| MS.gene052506 | MS.gene066800 | 0.848915 | 4.52E-60 | -1.69E-46 |
| MS.gene052615 | MS.gene066800 | 0.859509 | 3.94E-63 | -1.69E-46 |
| MS.gene052820 | MS.gene066800 | 0.809398 | 1.93E-50 | -1.69E-46 |
| MS.gene052822 | MS.gene066800 | 0.847062 | 1.47E-59 | -1.69E-46 |
| MS.gene052823 | MS.gene066800 | 0.865601 | 5.25E-65 | -1.69E-46 |
| MS.gene052825 | MS.gene066800 | 0.859712 | 3.42E-63 | -1.69E-46 |
| MS.gene052916 | MS.gene066800 | 0.816525 | 5.29E-52 | -1.69E-46 |
| MS.gene052966 | MS.gene066800 | 0.803196 | 3.91E-49 | -1.69E-46 |
| MS.gene052982 | MS.gene066800 | 0.859112 | 5.18E-63 | -1.69E-46 |
| MS.gene053104 | MS.gene066800 | 0.845836 | 3.17E-59 | -1.69E-46 |
| MS.gene053203 | MS.gene066800 | 0.830492 | 2.85E-55 | -1.69E-46 |
| MS.gene053207 | MS.gene066800 | 0.837527 | 4.93E-57 | -1.69E-46 |
| MS.gene053213 | MS.gene066800 | 0.873234 | 1.72E-67 | -1.69E-46 |
| MS.gene053286 | MS.gene066800 | 0.866606 | 2.52E-65 | -1.69E-46 |
| MS.gene053436 | MS.gene066800 | 0.877573 | 5.64E-69 | -1.69E-46 |
| MS.gene053449 | MS.gene066800 | 0.822981 | 1.77E-53 | -1.69E-46 |
| MS.gene053480 | MS.gene066800 | 0.816787 | 4.62E-52 | -1.69E-46 |
| MS.gene053574 | MS.gene066800 | 0.908381 | 1.82E-81 | -1.69E-46 |
| MS.gene053579 | MS.gene066800 | 0.814042 | 1.88E-51 | -1.69E-46 |
| MS.gene053626 | MS.gene066800 | 0.867934 | 9.49E-66 | -1.69E-46 |
| MS.gene053632 | MS.gene066800 | 0.841409 | 4.83E-58 | -1.69E-46 |
| MS.gene053824 | MS.gene066800 | 0.839882 | 1.21E-57 | -1.69E-46 |
| MS.gene053912 | MS.gene066800 | 0.800241 | 1.58E-48 | -1.69E-46 |
| MS.gene053916 | MS.gene066800 | 0.850725 | 1.41E-60 | -1.69E-46 |
| MS.gene054003 | MS.gene066800 | 0.816256 | 6.07E-52 | -1.69E-46 |
| MS.gene054408 | MS.gene066800 | 0.860323 | 2.24E-63 | -1.69E-46 |
| MS.gene054595 | MS.gene066800 | 0.824508 | 7.77E-54 | -1.69E-46 |
| MS.gene054600 | MS.gene066800 | 0.841972 | 3.44E-58 | -1.69E-46 |
| MS.gene054642 | MS.gene066800 | 0.85374 | 1.96E-61 | -1.69E-46 |
| MS.gene05470 | MS.gene066800 | 0.805312 | 1.42E-49 | -1.69E-46 |
| MS.gene054927 | MS.gene066800 | 0.85619 | 3.80E-62 | -1.69E-46 |
| MS.gene05494 | MS.gene066800 | 0.81324 | 2.83E-51 | -1.69E-46 |
| MS.gene054954 | MS.gene066800 | 0.814758 | 1.31E-51 | -1.69E-46 |
| MS.gene05505 | MS.gene066800 | 0.868948 | 4.46E-66 | -1.69E-46 |
| MS.gene055116 | MS.gene066800 | 0.809169 | 2.16E-50 | -1.69E-46 |
| MS.gene055206 | MS.gene066800 | 0.826447 | 2.70E-54 | -1.69E-46 |
| MS.gene055212 | MS.gene066800 | 0.814171 | 1.77E-51 | -1.69E-46 |
| MS.gene055224 | MS.gene066800 | 0.842135 | 3.11E-58 | -1.69E-46 |
| MS.gene055289 | MS.gene066800 | 0.861904 | 7.39E-64 | -1.69E-46 |
| MS.gene055362 | MS.gene066800 | 0.831979 | 1.23E-55 | -1.69E-46 |
| MS.gene055486 | MS.gene066800 | 0.823438 | 1.39E-53 | -1.69E-46 |
| MS.gene055502 | MS.gene066800 | 0.847241 | 1.31E-59 | -1.69E-46 |
| MS.gene055577 | MS.gene066800 | 0.845605 | 3.66E-59 | -1.69E-46 |
| MS.gene055722 | MS.gene066800 | 0.858556 | 7.59E-63 | -1.69E-46 |
| MS.gene055741 | MS.gene066800 | 0.811764 | 5.95E-51 | -1.69E-46 |
| MS.gene055744 | MS.gene066800 | 0.809402 | 1.93E-50 | -1.69E-46 |
| MS.gene055750 | MS.gene066800 | 0.819331 | 1.23E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene066800 | 0.829922 | 3.92E-55 | -1.69E-46 |
| MS.gene055909 | MS.gene066800 | 0.839644 | 1.40E-57 | -1.69E-46 |
| MS.gene055911 | MS.gene066800 | 0.834491 | 2.91E-56 | -1.69E-46 |
| MS.gene05592 | MS.gene066800 | 0.807391 | 5.17E-50 | -1.69E-46 |
| MS.gene055941 | MS.gene066800 | 0.818644 | 1.76E-52 | -1.69E-46 |
| MS.gene056040 | MS.gene066800 | 0.810135 | 1.34E-50 | -1.69E-46 |
| MS.gene056046 | MS.gene066800 | 0.823923 | 1.07E-53 | -1.69E-46 |
| MS.gene056166 | MS.gene066800 | 0.873583 | 1.31E-67 | -1.69E-46 |
| MS.gene056374 | MS.gene066800 | 0.820675 | 6.05E-53 | -1.69E-46 |
| MS.gene056422 | MS.gene066800 | 0.835039 | 2.12E-56 | -1.69E-46 |
| MS.gene056446 | MS.gene066800 | 0.837145 | 6.18E-57 | -1.69E-46 |
| MS.gene056448 | MS.gene066800 | 0.840819 | 6.91E-58 | -1.69E-46 |
| MS.gene056487 | MS.gene066800 | 0.846498 | 2.09E-59 | -1.69E-46 |
| MS.gene056504 | MS.gene066800 | 0.842593 | 2.35E-58 | -1.69E-46 |
| MS.gene056510 | MS.gene066800 | 0.813091 | 3.05E-51 | -1.69E-46 |
| MS.gene056511 | MS.gene066800 | 0.871872 | 4.91E-67 | -1.69E-46 |
| MS.gene05664 | MS.gene066800 | 0.832891 | 7.30E-56 | -1.69E-46 |
| MS.gene056657 | MS.gene066800 | 0.852876 | 3.46E-61 | -1.69E-46 |
| MS.gene05666 | MS.gene066800 | 0.827975 | 1.16E-54 | -1.69E-46 |
| MS.gene056692 | MS.gene066800 | 0.800495 | 1.40E-48 | -1.69E-46 |
| MS.gene057048 | MS.gene066800 | 0.805162 | 1.52E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene066800 | 0.875032 | 4.24E-68 | -1.69E-46 |
| MS.gene057086 | MS.gene066800 | 0.838101 | 3.51E-57 | -1.69E-46 |
| MS.gene057124 | MS.gene066800 | 0.820005 | 8.62E-53 | -1.69E-46 |
| MS.gene057146 | MS.gene066800 | 0.800399 | 1.47E-48 | -1.69E-46 |
| MS.gene057331 | MS.gene066800 | 0.833506 | 5.13E-56 | -1.69E-46 |
| MS.gene057416 | MS.gene066800 | 0.855122 | 7.79E-62 | -1.69E-46 |
| MS.gene057658 | MS.gene066800 | 0.818074 | 2.37E-52 | -1.69E-46 |
| MS.gene057734 | MS.gene066800 | 0.864083 | 1.57E-64 | -1.69E-46 |
| MS.gene057831 | MS.gene066800 | 0.819111 | 1.38E-52 | -1.69E-46 |
| MS.gene057856 | MS.gene066800 | 0.822154 | 2.76E-53 | -1.69E-46 |
| MS.gene05787 | MS.gene066800 | 0.830634 | 2.63E-55 | -1.69E-46 |
| MS.gene057926 | MS.gene066800 | 0.807237 | 5.58E-50 | -1.69E-46 |
| MS.gene058019 | MS.gene066800 | 0.843551 | 1.31E-58 | -1.69E-46 |
| MS.gene058130 | MS.gene066800 | 0.861045 | 1.35E-63 | -1.69E-46 |
| MS.gene058338 | MS.gene066800 | 0.819896 | 9.13E-53 | -1.69E-46 |
| MS.gene058376 | MS.gene066800 | 0.82403 | 1.01E-53 | -1.69E-46 |
| MS.gene05837 | MS.gene066800 | 0.843884 | 1.06E-58 | -1.69E-46 |
| MS.gene058419 | MS.gene066800 | 0.859061 | 5.37E-63 | -1.69E-46 |
| MS.gene058544 | MS.gene066800 | 0.842295 | 2.82E-58 | -1.69E-46 |
| MS.gene058723 | MS.gene066800 | 0.806489 | 8.02E-50 | -1.69E-46 |
| MS.gene058838 | MS.gene066800 | 0.858702 | 6.87E-63 | -1.69E-46 |
| MS.gene05883 | MS.gene066800 | 0.807542 | 4.80E-50 | -1.69E-46 |
| MS.gene058948 | MS.gene066800 | 0.804791 | 1.82E-49 | -1.69E-46 |
| MS.gene059023 | MS.gene066800 | 0.834558 | 2.80E-56 | -1.69E-46 |
| MS.gene05913 | MS.gene066800 | 0.828224 | 1.01E-54 | -1.69E-46 |
| MS.gene05934 | MS.gene066800 | 0.837824 | 4.14E-57 | -1.69E-46 |
| MS.gene059366 | MS.gene066800 | 0.802954 | 4.39E-49 | -1.69E-46 |
| MS.gene059367 | MS.gene066800 | 0.85201 | 6.11E-61 | -1.69E-46 |
| MS.gene059368 | MS.gene066800 | 0.863778 | 1.95E-64 | -1.69E-46 |
| MS.gene059455 | MS.gene066800 | 0.83953 | 1.50E-57 | -1.69E-46 |
| MS.gene059536 | MS.gene066800 | 0.817085 | 3.96E-52 | -1.69E-46 |
| MS.gene059667 | MS.gene066800 | 0.869687 | 2.57E-66 | -1.69E-46 |
| MS.gene059677 | MS.gene066800 | 0.814965 | 1.18E-51 | -1.69E-46 |
| MS.gene059688 | MS.gene066800 | 0.806607 | 7.58E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene066800 | 0.86065 | 1.78E-63 | -1.69E-46 |
| MS.gene059801 | MS.gene066800 | 0.813898 | 2.03E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene066800 | 0.826914 | 2.09E-54 | -1.69E-46 |
| MS.gene059902 | MS.gene066800 | 0.806507 | 7.95E-50 | -1.69E-46 |
| MS.gene060403 | MS.gene066800 | 0.814423 | 1.55E-51 | -1.69E-46 |
| MS.gene060482 | MS.gene066800 | 0.852186 | 5.44E-61 | -1.69E-46 |
| MS.gene060762 | MS.gene066800 | 0.825689 | 4.09E-54 | -1.69E-46 |
| MS.gene060778 | MS.gene066800 | 0.809573 | 1.77E-50 | -1.69E-46 |
| MS.gene06077 | MS.gene066800 | 0.82067 | 6.07E-53 | -1.69E-46 |
| MS.gene060804 | MS.gene066800 | 0.856112 | 4.01E-62 | -1.69E-46 |
| MS.gene060818 | MS.gene066800 | 0.800345 | 1.51E-48 | -1.69E-46 |
| MS.gene060835 | MS.gene066800 | 0.890192 | 1.23E-73 | -1.69E-46 |
| MS.gene060837 | MS.gene066800 | 0.854717 | 1.02E-61 | -1.69E-46 |
| MS.gene06092 | MS.gene066800 | 0.868712 | 5.33E-66 | -1.69E-46 |
| MS.gene06097 | MS.gene066800 | 0.842608 | 2.33E-58 | -1.69E-46 |
| MS.gene060982 | MS.gene066800 | 0.85189 | 6.61E-61 | -1.69E-46 |
| MS.gene061041 | MS.gene066800 | 0.846433 | 2.18E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066800.t1 | MTR_3g086050 | 94.595 | 222 | 11 | 1 | 1 | 222 | 1 | 221 | 9.27e-137 | 382 |
| MS.gene066800.t1 | MTR_3g052760 | 44.206 | 233 | 102 | 9 | 4 | 222 | 17 | 235 | 9.13e-56 | 177 |
| MS.gene066800.t1 | MTR_3g092460 | 41.250 | 160 | 74 | 4 | 64 | 222 | 95 | 235 | 1.54e-33 | 120 |
| MS.gene066800.t1 | MTR_3g092460 | 41.401 | 157 | 72 | 4 | 67 | 222 | 129 | 266 | 5.31e-32 | 117 |
| MS.gene066800.t1 | MTR_0004s0510 | 28.509 | 228 | 139 | 7 | 1 | 222 | 1 | 210 | 2.60e-21 | 88.2 |
| MS.gene066800.t1 | MTR_0004s0510 | 33.121 | 157 | 86 | 5 | 68 | 222 | 70 | 209 | 9.84e-21 | 86.7 |
| MS.gene066800.t1 | MTR_4g088445 | 34.783 | 92 | 57 | 2 | 124 | 212 | 38 | 129 | 6.37e-13 | 64.3 |
| MS.gene066800.t1 | MTR_7g102590 | 40.230 | 87 | 46 | 2 | 123 | 208 | 31 | 112 | 1.51e-12 | 62.8 |
| MS.gene066800.t1 | MTR_5g081530 | 27.941 | 136 | 81 | 4 | 81 | 207 | 7 | 134 | 2.64e-12 | 62.8 |
| MS.gene066800.t1 | MTR_4g010320 | 35.088 | 114 | 64 | 2 | 119 | 222 | 118 | 231 | 3.34e-12 | 63.9 |
| MS.gene066800.t1 | MTR_6g022000 | 36.458 | 96 | 55 | 4 | 119 | 208 | 28 | 123 | 1.21e-11 | 60.8 |
| MS.gene066800.t1 | MTR_6g061940 | 28.037 | 107 | 72 | 2 | 118 | 221 | 53 | 157 | 6.31e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066800.t1 | AT4G27670 | 43.182 | 176 | 71 | 7 | 56 | 222 | 72 | 227 | 5.19e-38 | 132 |
| MS.gene066800.t1 | AT1G52560 | 40.952 | 105 | 58 | 3 | 122 | 222 | 121 | 225 | 7.27e-20 | 84.7 |
| MS.gene066800.t1 | AT1G52560 | 40.952 | 105 | 58 | 3 | 122 | 222 | 128 | 232 | 8.29e-20 | 84.7 |
| MS.gene066800.t1 | AT4G25200 | 33.962 | 159 | 88 | 5 | 51 | 208 | 53 | 195 | 5.21e-19 | 82.0 |
| MS.gene066800.t1 | AT5G51440 | 32.203 | 177 | 99 | 5 | 33 | 208 | 39 | 195 | 2.25e-18 | 80.5 |
| MS.gene066800.t1 | AT1G07400 | 31.783 | 129 | 72 | 6 | 91 | 209 | 19 | 141 | 1.46e-12 | 63.5 |
| MS.gene066800.t1 | AT5G37670 | 36.792 | 106 | 58 | 4 | 125 | 221 | 28 | 133 | 7.03e-12 | 61.2 |
| MS.gene066800.t1 | AT1G53540 | 32.673 | 101 | 65 | 2 | 124 | 221 | 55 | 155 | 1.94e-11 | 60.5 |
| MS.gene066800.t1 | AT1G54050 | 34.188 | 117 | 62 | 4 | 104 | 206 | 22 | 137 | 4.91e-11 | 59.3 |
| MS.gene066800.t1 | AT1G54050 | 34.188 | 117 | 62 | 4 | 104 | 206 | 22 | 137 | 4.91e-11 | 59.3 |
| MS.gene066800.t1 | AT1G59860 | 34.951 | 103 | 60 | 4 | 117 | 215 | 46 | 145 | 5.32e-11 | 59.3 |
Find 63 sgRNAs with CRISPR-Local
Find 67 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTCATCATTCTTCTTCT+TGG | 0.080906 | 3.2:+73958038 | None:intergenic |
| TTCTCAAACTGCACATTCTT+TGG | 0.245312 | 3.2:+73957967 | None:intergenic |
| CTGCTGCACCGATAGGGTTA+TGG | 0.285020 | 3.2:-73958335 | MS.gene066800:CDS |
| AAGGAGTAGGTGGGTATAGA+AGG | 0.294040 | 3.2:-73958197 | MS.gene066800:CDS |
| ACAAAGAGGATGTTAAAGTT+TGG | 0.296691 | 3.2:-73958101 | MS.gene066800:CDS |
| CACTCTTTATCCTTAAATCT+TGG | 0.324147 | 3.2:-73958513 | MS.gene066800:CDS |
| TGTGCAGTTTGAGAATATTA+AGG | 0.336710 | 3.2:-73957959 | MS.gene066800:CDS |
| TGCTGCACCGATAGGGTTAT+GGG | 0.365142 | 3.2:-73958334 | MS.gene066800:CDS |
| CAAAGAGGATGTTAAAGTTT+GGG | 0.367241 | 3.2:-73958100 | MS.gene066800:CDS |
| TTCTCTTGCTTCACCTGTCA+TGG | 0.368553 | 3.2:+73958428 | None:intergenic |
| GAATATTAAGGCTGAGGTTA+AGG | 0.368713 | 3.2:-73957947 | MS.gene066800:CDS |
| AACATTAAGATCAAGGACTT+TGG | 0.390389 | 3.2:+73957879 | None:intergenic |
| CAGGTTAAGACCAAGATTTA+AGG | 0.391199 | 3.2:+73958503 | None:intergenic |
| AGTTTGTCTTGATGAACTCT+TGG | 0.419007 | 3.2:+73958470 | None:intergenic |
| TGATGAACTCTTGGAAATCA+TGG | 0.438584 | 3.2:+73958479 | None:intergenic |
| AAGGACAGTGCAAGAGATGA+TGG | 0.443408 | 3.2:-73958295 | MS.gene066800:CDS |
| GTCATTGAACATTAAGATCA+AGG | 0.444311 | 3.2:+73957872 | None:intergenic |
| TCTCCTTCTTTAATCTCCCA+TGG | 0.457000 | 3.2:+73958162 | None:intergenic |
| ATTAAGGCTGAGGTTAAGGA+TGG | 0.462230 | 3.2:-73957943 | MS.gene066800:CDS |
| TCATCGCCGCTACCGATTGA+AGG | 0.462817 | 3.2:-73958216 | MS.gene066800:CDS |
| CTCTCTTCTTGGGTTCGGAC+TGG | 0.469722 | 3.2:+73958364 | None:intergenic |
| TCAATTGTACTCATTGCAAA+CGG | 0.479546 | 3.2:+73958246 | None:intergenic |
| CATAACCCTATCGGTGCAGC+AGG | 0.490168 | 3.2:+73958336 | None:intergenic |
| GAATAAGTAGTAGTAGCCTT+AGG | 0.490783 | 3.2:+73957901 | None:intergenic |
| CAATTGTACTCATTGCAAAC+GGG | 0.496144 | 3.2:+73958247 | None:intergenic |
| TCAATCGGTAGCGGCGATGA+AGG | 0.505690 | 3.2:+73958219 | None:intergenic |
| CTTCGAGTCAAAGCCATGAC+AGG | 0.510747 | 3.2:-73958441 | MS.gene066800:CDS |
| GTTTGAGAATATTAAGGCTG+AGG | 0.515148 | 3.2:-73957953 | MS.gene066800:CDS |
| AGAATGATGAAGATGAAGAA+TGG | 0.516116 | 3.2:-73958029 | MS.gene066800:CDS |
| TCTTTACATAACCATTCCTA+AGG | 0.516609 | 3.2:-73957917 | MS.gene066800:CDS |
| AGTAGGTGGGTATAGAAGGA+GGG | 0.522121 | 3.2:-73958193 | MS.gene066800:CDS |
| ACATCCTCTTTGTTCATACC+AGG | 0.528873 | 3.2:+73958111 | None:intergenic |
| GAGTAGGTGGGTATAGAAGG+AGG | 0.533601 | 3.2:-73958194 | MS.gene066800:CDS |
| CTGTCATGGCTTTGACTCGA+AGG | 0.534564 | 3.2:+73958442 | None:intergenic |
| TACCCACCTACTCCTTCAAT+CGG | 0.537111 | 3.2:+73958204 | None:intergenic |
| AACTCTTGGAAATCATGGAC+AGG | 0.539369 | 3.2:+73958484 | None:intergenic |
| TAAGGCTGAGGTTAAGGATG+GGG | 0.545488 | 3.2:-73957941 | MS.gene066800:CDS |
| ACACCATGGGAGATTAAAGA+AGG | 0.546168 | 3.2:-73958165 | MS.gene066800:CDS |
| GTAGGTGGGTATAGAAGGAG+GGG | 0.548522 | 3.2:-73958192 | MS.gene066800:CDS |
| GAGAAAGTGAATACAAGATG+AGG | 0.559520 | 3.2:-73958143 | MS.gene066800:CDS |
| GAAGAATGGTCTAAGAGCTA+TGG | 0.561468 | 3.2:-73958015 | MS.gene066800:CDS |
| AAGATGAGGTTTGATATGCC+TGG | 0.574216 | 3.2:-73958129 | MS.gene066800:CDS |
| TTGGGTGGAAGAGAAGATGT+TGG | 0.576341 | 3.2:-73958082 | MS.gene066800:CDS |
| CCGCTACCGATTGAAGGAGT+AGG | 0.578817 | 3.2:-73958210 | MS.gene066800:CDS |
| AGAGGATGTTAAAGTTTGGG+TGG | 0.581219 | 3.2:-73958097 | MS.gene066800:CDS |
| TCTTGCACTGTCCTTGTCGT+AGG | 0.581285 | 3.2:+73958303 | None:intergenic |
| GGGAACAATGGAAAGCATGA+TGG | 0.589950 | 3.2:-73958274 | MS.gene066800:CDS |
| TCTTCTTGGGTTCGGACTGG+CGG | 0.591487 | 3.2:+73958367 | None:intergenic |
| TTAAGGCTGAGGTTAAGGAT+GGG | 0.596993 | 3.2:-73957942 | MS.gene066800:CDS |
| GCAAGAGATGATGGGAACAA+TGG | 0.598164 | 3.2:-73958286 | MS.gene066800:CDS |
| AATCGATCCCATAACCCTAT+CGG | 0.598439 | 3.2:+73958327 | None:intergenic |
| AGGACAGTGCAAGAGATGAT+GGG | 0.601662 | 3.2:-73958294 | MS.gene066800:CDS |
| TATTGTTTGATCTTGAAACA+TGG | 0.608054 | 3.2:+73958397 | None:intergenic |
| AGTAGTAGTAGCCTTAGGAA+TGG | 0.626005 | 3.2:+73957906 | None:intergenic |
| TTGCAATGAGTACAATTGAG+TGG | 0.632366 | 3.2:-73958242 | MS.gene066800:CDS |
| CTACCGATTGAAGGAGTAGG+TGG | 0.639864 | 3.2:-73958207 | MS.gene066800:CDS |
| AAGGAGGGGAAGAACACCAT+GGG | 0.642482 | 3.2:-73958178 | MS.gene066800:CDS |
| AATGGTCTAAGAGCTATGGT+AGG | 0.662268 | 3.2:-73958011 | MS.gene066800:CDS |
| CCTACTCCTTCAATCGGTAG+CGG | 0.682306 | 3.2:+73958210 | None:intergenic |
| TACCGATTGAAGGAGTAGGT+GGG | 0.683545 | 3.2:-73958206 | MS.gene066800:CDS |
| GAAGGAGGGGAAGAACACCA+TGG | 0.687857 | 3.2:-73958179 | MS.gene066800:CDS |
| GGGATCGATTTCCTACGACA+AGG | 0.701576 | 3.2:-73958314 | MS.gene066800:CDS |
| TATGCCTGGTATGAACAAAG+AGG | 0.732695 | 3.2:-73958115 | MS.gene066800:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TATTGTTTGATCTTGAAACA+TGG | + | chr3.2:73957998-73958017 | None:intergenic | 25.0% |
| AACATTAAGATCAAGGACTT+TGG | + | chr3.2:73958516-73958535 | None:intergenic | 30.0% | |
| ACAAAGAGGATGTTAAAGTT+TGG | - | chr3.2:73958291-73958310 | MS.gene066800:CDS | 30.0% | |
| AGAATGATGAAGATGAAGAA+TGG | - | chr3.2:73958363-73958382 | MS.gene066800:CDS | 30.0% | |
| ATCTTCATCATTCTTCTTCT+TGG | + | chr3.2:73958357-73958376 | None:intergenic | 30.0% | |
| CAAAGAGGATGTTAAAGTTT+GGG | - | chr3.2:73958292-73958311 | MS.gene066800:CDS | 30.0% | |
| CACTCTTTATCCTTAAATCT+TGG | - | chr3.2:73957879-73957898 | MS.gene066800:CDS | 30.0% | |
| TCAATTGTACTCATTGCAAA+CGG | + | chr3.2:73958149-73958168 | None:intergenic | 30.0% | |
| TCTTTACATAACCATTCCTA+AGG | - | chr3.2:73958475-73958494 | MS.gene066800:CDS | 30.0% | |
| TGTGCAGTTTGAGAATATTA+AGG | - | chr3.2:73958433-73958452 | MS.gene066800:CDS | 30.0% | |
| AAAAACTCTCTTCTTGGGTT+CGG | + | chr3.2:73958036-73958055 | None:intergenic | 35.0% | |
| AGTTTGTCTTGATGAACTCT+TGG | + | chr3.2:73957925-73957944 | None:intergenic | 35.0% | |
| CAATTGTACTCATTGCAAAC+GGG | + | chr3.2:73958148-73958167 | None:intergenic | 35.0% | |
| CAGGTTAAGACCAAGATTTA+AGG | + | chr3.2:73957892-73957911 | None:intergenic | 35.0% | |
| GAATAAGTAGTAGTAGCCTT+AGG | + | chr3.2:73958494-73958513 | None:intergenic | 35.0% | |
| GAATATTAAGGCTGAGGTTA+AGG | - | chr3.2:73958445-73958464 | MS.gene066800:CDS | 35.0% | |
| GAGAAAGTGAATACAAGATG+AGG | - | chr3.2:73958249-73958268 | MS.gene066800:CDS | 35.0% | |
| GTTTGAGAATATTAAGGCTG+AGG | - | chr3.2:73958439-73958458 | MS.gene066800:CDS | 35.0% | |
| TGATGAACTCTTGGAAATCA+TGG | + | chr3.2:73957916-73957935 | None:intergenic | 35.0% | |
| TTCTCAAACTGCACATTCTT+TGG | + | chr3.2:73958428-73958447 | None:intergenic | 35.0% | |
| TTGCAATGAGTACAATTGAG+TGG | - | chr3.2:73958150-73958169 | MS.gene066800:CDS | 35.0% | |
| AACTCTTGGAAATCATGGAC+AGG | + | chr3.2:73957911-73957930 | None:intergenic | 40.0% | |
| AAGATGAGGTTTGATATGCC+TGG | - | chr3.2:73958263-73958282 | MS.gene066800:CDS | 40.0% | |
| AATCGATCCCATAACCCTAT+CGG | + | chr3.2:73958068-73958087 | None:intergenic | 40.0% | |
| AATGGTCTAAGAGCTATGGT+AGG | - | chr3.2:73958381-73958400 | MS.gene066800:CDS | 40.0% | |
| ACACCATGGGAGATTAAAGA+AGG | - | chr3.2:73958227-73958246 | MS.gene066800:CDS | 40.0% | |
| ACATCCTCTTTGTTCATACC+AGG | + | chr3.2:73958284-73958303 | None:intergenic | 40.0% | |
| AGAGGATGTTAAAGTTTGGG+TGG | - | chr3.2:73958295-73958314 | MS.gene066800:CDS | 40.0% | |
| AGCAGGAAAAACTCTCTTCT+TGG | + | chr3.2:73958042-73958061 | None:intergenic | 40.0% | |
| ATTAAGGCTGAGGTTAAGGA+TGG | - | chr3.2:73958449-73958468 | MS.gene066800:CDS | 40.0% | |
| GAAGAATGGTCTAAGAGCTA+TGG | - | chr3.2:73958377-73958396 | MS.gene066800:CDS | 40.0% | |
| GCAGGAAAAACTCTCTTCTT+GGG | + | chr3.2:73958041-73958060 | None:intergenic | 40.0% | |
| TATGCCTGGTATGAACAAAG+AGG | - | chr3.2:73958277-73958296 | MS.gene066800:CDS | 40.0% | |
| TCTCCTTCTTTAATCTCCCA+TGG | + | chr3.2:73958233-73958252 | None:intergenic | 40.0% | |
| TTAAGGCTGAGGTTAAGGAT+GGG | - | chr3.2:73958450-73958469 | MS.gene066800:CDS | 40.0% | |
| ! | AGTAGTAGTAGCCTTAGGAA+TGG | + | chr3.2:73958489-73958508 | None:intergenic | 40.0% |
| AAGGACAGTGCAAGAGATGA+TGG | - | chr3.2:73958097-73958116 | MS.gene066800:CDS | 45.0% | |
| AAGGAGTAGGTGGGTATAGA+AGG | - | chr3.2:73958195-73958214 | MS.gene066800:CDS | 45.0% | |
| AGGACAGTGCAAGAGATGAT+GGG | - | chr3.2:73958098-73958117 | MS.gene066800:CDS | 45.0% | |
| AGTAGGTGGGTATAGAAGGA+GGG | - | chr3.2:73958199-73958218 | MS.gene066800:CDS | 45.0% | |
| TAAGGCTGAGGTTAAGGATG+GGG | - | chr3.2:73958451-73958470 | MS.gene066800:CDS | 45.0% | |
| TACCCACCTACTCCTTCAAT+CGG | + | chr3.2:73958191-73958210 | None:intergenic | 45.0% | |
| TTCTCTTGCTTCACCTGTCA+TGG | + | chr3.2:73957967-73957986 | None:intergenic | 45.0% | |
| TTGGGTGGAAGAGAAGATGT+TGG | - | chr3.2:73958310-73958329 | MS.gene066800:CDS | 45.0% | |
| ! | GGGAACAATGGAAAGCATGA+TGG | - | chr3.2:73958118-73958137 | MS.gene066800:CDS | 45.0% |
| ! | TACCGATTGAAGGAGTAGGT+GGG | - | chr3.2:73958186-73958205 | MS.gene066800:CDS | 45.0% |
| !! | GCAAGAGATGATGGGAACAA+TGG | - | chr3.2:73958106-73958125 | MS.gene066800:CDS | 45.0% |
| !! | TTTTTCCTGCTGCACCGATA+GGG | - | chr3.2:73958051-73958070 | MS.gene066800:CDS | 45.0% |
| AAGGAGGGGAAGAACACCAT+GGG | - | chr3.2:73958214-73958233 | MS.gene066800:CDS | 50.0% | |
| CCTACTCCTTCAATCGGTAG+CGG | + | chr3.2:73958185-73958204 | None:intergenic | 50.0% | |
| CTTCGAGTCAAAGCCATGAC+AGG | - | chr3.2:73957951-73957970 | MS.gene066800:CDS | 50.0% | |
| GAGTAGGTGGGTATAGAAGG+AGG | - | chr3.2:73958198-73958217 | MS.gene066800:CDS | 50.0% | |
| GTAGGTGGGTATAGAAGGAG+GGG | - | chr3.2:73958200-73958219 | MS.gene066800:CDS | 50.0% | |
| TCTTGCACTGTCCTTGTCGT+AGG | + | chr3.2:73958092-73958111 | None:intergenic | 50.0% | |
| ! | CTACCGATTGAAGGAGTAGG+TGG | - | chr3.2:73958185-73958204 | MS.gene066800:CDS | 50.0% |
| ! | GGGATCGATTTCCTACGACA+AGG | - | chr3.2:73958078-73958097 | MS.gene066800:CDS | 50.0% |
| ! | TGCTGCACCGATAGGGTTAT+GGG | - | chr3.2:73958058-73958077 | MS.gene066800:CDS | 50.0% |
| !! | CTGTCATGGCTTTGACTCGA+AGG | + | chr3.2:73957953-73957972 | None:intergenic | 50.0% |
| !! | GTTTTTCCTGCTGCACCGAT+AGG | - | chr3.2:73958050-73958069 | MS.gene066800:CDS | 50.0% |
| CATAACCCTATCGGTGCAGC+AGG | + | chr3.2:73958059-73958078 | None:intergenic | 55.0% | |
| CTCTCTTCTTGGGTTCGGAC+TGG | + | chr3.2:73958031-73958050 | None:intergenic | 55.0% | |
| GAAGGAGGGGAAGAACACCA+TGG | - | chr3.2:73958213-73958232 | MS.gene066800:CDS | 55.0% | |
| ! | CCGCTACCGATTGAAGGAGT+AGG | - | chr3.2:73958182-73958201 | MS.gene066800:CDS | 55.0% |
| ! | CTGCTGCACCGATAGGGTTA+TGG | - | chr3.2:73958057-73958076 | MS.gene066800:CDS | 55.0% |
| ! | TCAATCGGTAGCGGCGATGA+AGG | + | chr3.2:73958176-73958195 | None:intergenic | 55.0% |
| ! | TCATCGCCGCTACCGATTGA+AGG | - | chr3.2:73958176-73958195 | MS.gene066800:CDS | 55.0% |
| ! | TCTTCTTGGGTTCGGACTGG+CGG | + | chr3.2:73958028-73958047 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 73957873 | 73958541 | 73957873 | ID=MS.gene066800 |
| chr3.2 | mRNA | 73957873 | 73958541 | 73957873 | ID=MS.gene066800.t1;Parent=MS.gene066800 |
| chr3.2 | exon | 73957873 | 73958541 | 73957873 | ID=MS.gene066800.t1.exon1;Parent=MS.gene066800.t1 |
| chr3.2 | CDS | 73957873 | 73958541 | 73957873 | ID=cds.MS.gene066800.t1;Parent=MS.gene066800.t1 |
| Gene Sequence |
| Protein sequence |
