Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1278740 | sp|Q84JT7|ARID1_ARATH | 39.938 | 323 | 153 | 9 | 85 | 402 | 244 | 530 | 3.09e-65 | 221 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1278740 | A0A072TN61 | 93.765 | 417 | 24 | 1 | 1 | 415 | 177 | 593 | 0.0 | 795 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1278740 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012940 | Msa1278740 | 0.857761 | 1.309099e-62 | -8.615850e-47 |
| Msa0017390 | Msa1278740 | 0.809499 | 1.835815e-50 | -8.615850e-47 |
| Msa0039250 | Msa1278740 | 0.830174 | 3.407492e-55 | -8.615850e-47 |
| Msa0041690 | Msa1278740 | 0.814193 | 1.745302e-51 | -8.615850e-47 |
| Msa0057710 | Msa1278740 | 0.811830 | 5.753385e-51 | -8.615850e-47 |
| Msa0065550 | Msa1278740 | 0.803685 | 3.098874e-49 | -8.615850e-47 |
| Msa0093850 | Msa1278740 | 0.822544 | 2.237664e-53 | -8.615850e-47 |
| Msa0097950 | Msa1278740 | 0.806736 | 7.116297e-50 | -8.615850e-47 |
| Msa0098470 | Msa1278740 | 0.815585 | 8.574495e-52 | -8.615850e-47 |
| Msa0106320 | Msa1278740 | 0.817291 | 3.558283e-52 | -8.615850e-47 |
| Msa0106620 | Msa1278740 | 0.824095 | 9.718363e-54 | -8.615850e-47 |
| Msa0106710 | Msa1278740 | 0.805901 | 1.067071e-49 | -8.615850e-47 |
| Msa0610090 | Msa1278740 | 0.815277 | 1.003716e-51 | -8.615850e-47 |
| Msa0628420 | Msa1278740 | 0.814430 | 1.547171e-51 | -8.615850e-47 |
| Msa0630940 | Msa1278740 | 0.804288 | 2.321049e-49 | -8.615850e-47 |
| Msa0638480 | Msa1278740 | 0.800953 | 1.131509e-48 | -8.615850e-47 |
| Msa0644030 | Msa1278740 | 0.825843 | 3.757703e-54 | -8.615850e-47 |
| Msa0658480 | Msa1278740 | 0.825379 | 4.841745e-54 | -8.615850e-47 |
| Msa0669180 | Msa1278740 | 0.823175 | 1.595267e-53 | -8.615850e-47 |
| Msa0679100 | Msa1278740 | 0.806398 | 8.389051e-50 | -8.615850e-47 |
| Msa0694990 | Msa1278740 | 0.805729 | 1.159542e-49 | -8.615850e-47 |
| Msa0695130 | Msa1278740 | 0.817841 | 2.674583e-52 | -8.615850e-47 |
| Msa0702590 | Msa1278740 | 0.809274 | 2.052126e-50 | -8.615850e-47 |
| Msa0702660 | Msa1278740 | 0.800099 | 1.689186e-48 | -8.615850e-47 |
| Msa0716410 | Msa1278740 | 0.808530 | 2.960547e-50 | -8.615850e-47 |
| Msa0744100 | Msa1278740 | 0.813415 | 2.589845e-51 | -8.615850e-47 |
| Msa0750250 | Msa1278740 | 0.800423 | 1.451267e-48 | -8.615850e-47 |
| Msa0756930 | Msa1278740 | 0.819572 | 1.082619e-52 | -8.615850e-47 |
| Msa0786520 | Msa1278740 | 0.802768 | 4.796366e-49 | -8.615850e-47 |
| Msa0788120 | Msa1278740 | 0.801612 | 8.292526e-49 | -8.615850e-47 |
| Msa0790400 | Msa1278740 | 0.802725 | 4.896409e-49 | -8.615850e-47 |
| Msa0809980 | Msa1278740 | 0.805643 | 1.208761e-49 | -8.615850e-47 |
| Msa0818630 | Msa1278740 | 0.826627 | 2.445297e-54 | -8.615850e-47 |
| Msa0818770 | Msa1278740 | 0.803506 | 3.375026e-49 | -8.615850e-47 |
| Msa0825270 | Msa1278740 | 0.812889 | 3.378402e-51 | -8.615850e-47 |
| Msa0826500 | Msa1278740 | 0.813817 | 2.112102e-51 | -8.615850e-47 |
| Msa0836500 | Msa1278740 | 0.810120 | 1.349877e-50 | -8.615850e-47 |
| Msa0130240 | Msa1278740 | 0.810695 | 1.014375e-50 | -8.615850e-47 |
| Msa0133720 | Msa1278740 | 0.827421 | 1.578846e-54 | -8.615850e-47 |
| Msa0133820 | Msa1278740 | 0.809055 | 2.286369e-50 | -8.615850e-47 |
| Msa0138360 | Msa1278740 | 0.812353 | 4.424393e-51 | -8.615850e-47 |
| Msa0147980 | Msa1278740 | 0.816891 | 4.376069e-52 | -8.615850e-47 |
| Msa0152870 | Msa1278740 | 0.828670 | 7.899735e-55 | -8.615850e-47 |
| Msa0168870 | Msa1278740 | 0.808935 | 2.425009e-50 | -8.615850e-47 |
| Msa0173890 | Msa1278740 | 0.803719 | 3.048679e-49 | -8.615850e-47 |
| Msa0181230 | Msa1278740 | 0.817406 | 3.352226e-52 | -8.615850e-47 |
| Msa1224840 | Msa1278740 | 0.811412 | 7.092084e-51 | -8.615850e-47 |
| Msa1234550 | Msa1278740 | 0.814229 | 1.713095e-51 | -8.615850e-47 |
| Msa1253550 | Msa1278740 | 0.819645 | 1.041467e-52 | -8.615850e-47 |
| Msa1277080 | Msa1278740 | 0.833141 | 6.325387e-56 | -8.615850e-47 |
| Msa1278740 | Msa1317950 | 0.942437 | 7.204301e-102 | -8.615850e-47 |
| Msa1278740 | Msa1317960 | 0.946148 | 8.006270e-105 | -8.615850e-47 |
| Msa1278740 | Msa1333560 | 0.830072 | 3.608495e-55 | -8.615850e-47 |
| Msa1278740 | Msa1335160 | 0.835108 | 2.032353e-56 | -8.615850e-47 |
| Msa1278740 | Msa1356610 | 0.803008 | 4.278629e-49 | -8.615850e-47 |
| Msa1278740 | Msa1359560 | 0.804011 | 2.650806e-49 | -8.615850e-47 |
| Msa1278740 | Msa1360980 | 0.813105 | 3.029430e-51 | -8.615850e-47 |
| Msa1278740 | Msa1369150 | 0.817708 | 2.866354e-52 | -8.615850e-47 |
| Msa1278740 | Msa1373820 | 0.821929 | 3.108269e-53 | -8.615850e-47 |
| Msa1278740 | Msa1383530 | 0.816985 | 4.169627e-52 | -8.615850e-47 |
| Msa1278740 | Msa1388550 | 0.955615 | 2.014383e-113 | -8.615850e-47 |
| Msa1278740 | Msa1393820 | 0.804680 | 1.923296e-49 | -8.615850e-47 |
| Msa1278740 | Msa1411950 | 0.818031 | 2.423567e-52 | -8.615850e-47 |
| Msa1278740 | Msa1443300 | 0.805253 | 1.459766e-49 | -8.615850e-47 |
| Msa1278740 | Msa1450720 | 0.802601 | 5.191420e-49 | -8.615850e-47 |
| Msa1278740 | Msa1465200 | 0.800163 | 1.639285e-48 | -8.615850e-47 |
| Msa0372810 | Msa1278740 | 0.813182 | 2.914034e-51 | -8.615850e-47 |
| Msa0376280 | Msa1278740 | 0.802384 | 5.756993e-49 | -8.615850e-47 |
| Msa0378970 | Msa1278740 | 0.805191 | 1.503981e-49 | -8.615850e-47 |
| Msa0384670 | Msa1278740 | 0.800236 | 1.584172e-48 | -8.615850e-47 |
| Msa0388990 | Msa1278740 | 0.944476 | 1.818404e-103 | -8.615850e-47 |
| Msa0394690 | Msa1278740 | 0.803564 | 3.282685e-49 | -8.615850e-47 |
| Msa0419720 | Msa1278740 | 0.803150 | 3.999868e-49 | -8.615850e-47 |
| Msa0434570 | Msa1278740 | 0.815974 | 7.020105e-52 | -8.615850e-47 |
| Msa0434770 | Msa1278740 | 0.818515 | 1.882779e-52 | -8.615850e-47 |
| Msa0435370 | Msa1278740 | 0.814834 | 1.259074e-51 | -8.615850e-47 |
| Msa0435420 | Msa1278740 | 0.809629 | 1.721953e-50 | -8.615850e-47 |
| Msa0478580 | Msa1278740 | 0.807281 | 5.456117e-50 | -8.615850e-47 |
| Msa0479200 | Msa1278740 | 0.807896 | 4.039670e-50 | -8.615850e-47 |
| Msa0980940 | Msa1278740 | 0.826322 | 2.890415e-54 | -8.615850e-47 |
| Msa1012720 | Msa1278740 | 0.818994 | 1.465429e-52 | -8.615850e-47 |
| Msa1050910 | Msa1278740 | 0.801754 | 7.756450e-49 | -8.615850e-47 |
| Msa1051600 | Msa1278740 | 0.811268 | 7.621304e-51 | -8.615850e-47 |
| Msa1068100 | Msa1278740 | 0.811858 | 5.673109e-51 | -8.615850e-47 |
| Msa1079230 | Msa1278740 | 0.834076 | 3.693406e-56 | -8.615850e-47 |
| Msa0241830 | Msa1278740 | 0.825451 | 4.654842e-54 | -8.615850e-47 |
| Msa0249580 | Msa1278740 | 0.812807 | 3.521332e-51 | -8.615850e-47 |
| Msa0261160 | Msa1278740 | 0.815800 | 7.679160e-52 | -8.615850e-47 |
| Msa0263080 | Msa1278740 | 0.823687 | 1.211353e-53 | -8.615850e-47 |
| Msa0279850 | Msa1278740 | 0.807706 | 4.434940e-50 | -8.615850e-47 |
| Msa0296250 | Msa1278740 | 0.804929 | 1.705839e-49 | -8.615850e-47 |
| Msa0300320 | Msa1278740 | 0.802085 | 6.631617e-49 | -8.615850e-47 |
| Msa0307850 | Msa1278740 | 0.811404 | 7.121258e-51 | -8.615850e-47 |
| Msa0322900 | Msa1278740 | 0.820690 | 6.004811e-53 | -8.615850e-47 |
| Msa0341690 | Msa1278740 | 0.832216 | 1.072851e-55 | -8.615850e-47 |
| Msa0343190 | Msa1278740 | 0.804682 | 1.920962e-49 | -8.615850e-47 |
| Msa1121260 | Msa1278740 | 0.800618 | 1.324716e-48 | -8.615850e-47 |
| Msa1123350 | Msa1278740 | 0.813444 | 2.552045e-51 | -8.615850e-47 |
| Msa1127590 | Msa1278740 | 0.849818 | 2.533193e-60 | -8.615850e-47 |
| Msa1169040 | Msa1278740 | 0.802416 | 5.668746e-49 | -8.615850e-47 |
| Msa1169720 | Msa1278740 | 0.824694 | 7.027090e-54 | -8.615850e-47 |
| Msa1201830 | Msa1278740 | 0.809628 | 1.722593e-50 | -8.615850e-47 |
| Msa1202580 | Msa1278740 | 0.804981 | 1.664233e-49 | -8.615850e-47 |
| Msa1219000 | Msa1278740 | 0.801455 | 8.930823e-49 | -8.615850e-47 |
| Msa1223330 | Msa1278740 | 0.802231 | 6.187768e-49 | -8.615850e-47 |
| Msa0511770 | Msa1278740 | 0.813172 | 2.928104e-51 | -8.615850e-47 |
| Msa0518030 | Msa1278740 | 0.860817 | 1.585464e-63 | -8.615850e-47 |
| Msa0527020 | Msa1278740 | 0.806800 | 6.898857e-50 | -8.615850e-47 |
| Msa0531250 | Msa1278740 | 0.816195 | 6.267764e-52 | -8.615850e-47 |
| Msa0547990 | Msa1278740 | 0.828136 | 1.063409e-54 | -8.615850e-47 |
| Msa0556010 | Msa1278740 | 0.835979 | 1.224224e-56 | -8.615850e-47 |
| Msa0583500 | Msa1278740 | 0.817207 | 3.716515e-52 | -8.615850e-47 |
| Msa0590640 | Msa1278740 | 0.813246 | 2.821325e-51 | -8.615850e-47 |
| Msa0597770 | Msa1278740 | 0.810241 | 1.271004e-50 | -8.615850e-47 |
| Msa0861510 | Msa1278740 | 0.806614 | 7.553120e-50 | -8.615850e-47 |
| Msa0861600 | Msa1278740 | 0.802277 | 6.054027e-49 | -8.615850e-47 |
| Msa0864420 | Msa1278740 | 0.806874 | 6.653122e-50 | -8.615850e-47 |
| Msa0888940 | Msa1278740 | 0.822414 | 2.398981e-53 | -8.615850e-47 |
| Msa0943170 | Msa1278740 | 0.804553 | 2.044245e-49 | -8.615850e-47 |
| Msa0944660 | Msa1278740 | 0.815683 | 8.154796e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1278740 | MtrunA17_Chr8g0348691 | 93.103 | 261 | 16 | 1 | 157 | 415 | 1 | 261 | 1.74e-175 | 490 |
| Msa1278740 | MtrunA17_Chr7g0248041 | 45.823 | 419 | 195 | 10 | 1 | 414 | 177 | 568 | 3.26e-112 | 341 |
| Msa1278740 | MtrunA17_Chr8g0348681 | 94.771 | 153 | 8 | 0 | 1 | 153 | 177 | 329 | 1.02e-99 | 300 |
| Msa1278740 | MtrunA17_Chr8g0387141 | 38.235 | 340 | 193 | 9 | 83 | 415 | 246 | 575 | 7.60e-63 | 212 |
| Msa1278740 | MtrunA17_Chr8g0387181 | 36.538 | 364 | 185 | 9 | 82 | 404 | 237 | 595 | 9.35e-62 | 210 |
| Msa1278740 | MtrunA17_Chr1g0186191 | 34.251 | 327 | 191 | 7 | 109 | 415 | 252 | 574 | 8.15e-51 | 180 |
| Msa1278740 | MtrunA17_Chr8g0387161 | 34.615 | 312 | 154 | 7 | 95 | 404 | 1 | 264 | 1.14e-50 | 172 |
| Msa1278740 | MtrunA17_Chr1g0186281 | 33.962 | 318 | 192 | 8 | 109 | 415 | 254 | 564 | 8.06e-50 | 177 |
| Msa1278740 | MtrunA17_Chr1g0186261 | 45.405 | 185 | 98 | 3 | 232 | 415 | 385 | 567 | 5.90e-47 | 169 |
| Msa1278740 | MtrunA17_Chr6g0479271 | 36.694 | 248 | 133 | 9 | 83 | 329 | 71 | 295 | 3.92e-32 | 124 |
| Msa1278740 | MtrunA17_Chr7g0241681 | 35.450 | 189 | 109 | 5 | 214 | 396 | 179 | 360 | 3.25e-29 | 117 |
| Msa1278740 | MtrunA17_Chr3g0086341 | 34.066 | 182 | 105 | 5 | 232 | 402 | 149 | 326 | 3.76e-23 | 101 |
| Msa1278740 | MtrunA17_Chr7g0241661 | 30.890 | 191 | 119 | 4 | 212 | 396 | 169 | 352 | 2.36e-20 | 91.7 |
| Msa1278740 | MtrunA17_Chr5g0420461 | 30.337 | 178 | 86 | 5 | 155 | 329 | 22 | 164 | 1.27e-16 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1278740 | AT2G46040.3 | 39.938 | 323 | 153 | 9 | 85 | 402 | 244 | 530 | 3.14e-66 | 221 |
| Msa1278740 | AT2G46040.1 | 39.938 | 323 | 153 | 9 | 85 | 402 | 244 | 530 | 3.14e-66 | 221 |
| Msa1278740 | AT2G46040.2 | 39.938 | 323 | 153 | 9 | 85 | 402 | 258 | 544 | 3.74e-66 | 221 |
| Msa1278740 | AT4G11400.2 | 34.985 | 343 | 183 | 8 | 95 | 413 | 225 | 551 | 2.12e-56 | 195 |
| Msa1278740 | AT4G11400.1 | 34.985 | 343 | 183 | 8 | 95 | 413 | 225 | 551 | 2.12e-56 | 195 |
| Msa1278740 | AT5G04110.2 | 38.415 | 164 | 87 | 5 | 232 | 384 | 362 | 522 | 1.99e-28 | 117 |
| Msa1278740 | AT5G04110.1 | 38.415 | 164 | 87 | 5 | 232 | 384 | 361 | 521 | 2.06e-28 | 117 |
| Msa1278740 | AT5G04110.3 | 38.415 | 164 | 87 | 5 | 232 | 384 | 361 | 521 | 2.06e-28 | 117 |
| Msa1278740 | AT5G04110.4 | 36.735 | 147 | 79 | 5 | 232 | 367 | 361 | 504 | 1.21e-20 | 94.4 |
| Msa1278740 | AT1G26580.3 | 32.124 | 193 | 110 | 6 | 228 | 402 | 65 | 254 | 8.30e-20 | 91.3 |
| Msa1278740 | AT1G26580.2 | 32.124 | 193 | 110 | 6 | 228 | 402 | 131 | 320 | 1.13e-19 | 91.3 |
| Msa1278740 | AT1G26580.1 | 32.124 | 193 | 110 | 6 | 228 | 402 | 131 | 320 | 1.13e-19 | 91.3 |
| Msa1278740 | AT2G03470.2 | 31.148 | 183 | 107 | 5 | 231 | 402 | 121 | 295 | 9.83e-19 | 88.2 |
| Msa1278740 | AT2G03470.1 | 31.148 | 183 | 107 | 5 | 231 | 402 | 122 | 296 | 9.97e-19 | 88.2 |
| Msa1278740 | AT1G13880.3 | 29.843 | 191 | 112 | 7 | 234 | 411 | 131 | 312 | 4.46e-17 | 83.2 |
| Msa1278740 | AT1G13880.1 | 29.843 | 191 | 112 | 7 | 234 | 411 | 130 | 311 | 4.48e-17 | 83.2 |
| Msa1278740 | AT1G13880.2 | 29.843 | 191 | 112 | 7 | 234 | 411 | 140 | 321 | 4.58e-17 | 83.2 |
Find 168 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCACTTAGTATCGCTTTC+AGG | 0.202455 | 8_3:-15264272 | None:intergenic |
| TCAGGCATCGGAACAATTTC+AGG | 0.206652 | 8_3:-15262732 | None:intergenic |
| AGAGAGGATATGAACATTTC+TGG | 0.214678 | 8_3:+15264573 | Msa1278740:CDS |
| GTCTGGTTTGATGGGGTTTA+AGG | 0.229952 | 8_3:+15262129 | Msa1278740:five_prime_UTR |
| CTCCGACAATCTACAATCTT+AGG | 0.256515 | 8_3:+15264021 | Msa1278740:CDS |
| GAAAGGTTGGTTTGTTGTTT+TGG | 0.268550 | 8_3:+15264951 | Msa1278740:three_prime_UTR |
| GACGATCAAGTTATAGTAGA+TGG | 0.274070 | 8_3:+15264183 | Msa1278740:CDS |
| CGAGCATTGAACAGCAAAAT+TGG | 0.292781 | 8_3:+15262841 | Msa1278740:CDS |
| TATGGTATGCTTTGCGTTGC+AGG | 0.295894 | 8_3:-15264667 | None:intergenic |
| AAATGTTCATATCCTCTCTT+TGG | 0.311222 | 8_3:-15264569 | None:intergenic |
| TGATAATATTGTTCCGGTAT+TGG | 0.317593 | 8_3:+15262602 | Msa1278740:CDS |
| AAAGTTTCCCTGCTCTTGTT+AGG | 0.326065 | 8_3:-15264617 | None:intergenic |
| AAAATATGATATGCAATCTA+TGG | 0.330951 | 8_3:-15265079 | None:intergenic |
| CATCCCTCGATTCATCATTC+TGG | 0.335310 | 8_3:-15262403 | None:intergenic |
| TGTGCTAGGCGAAGGAGATT+TGG | 0.343980 | 8_3:+15264115 | Msa1278740:CDS |
| CCCTTTCCATGTGGCTACTC+TGG | 0.347988 | 8_3:-15264776 | None:intergenic |
| TTAGTATCGCTTTCAGGATT+CGG | 0.348247 | 8_3:-15264266 | None:intergenic |
| AAGGTTAAGGGTGGAGTTGA+TGG | 0.350428 | 8_3:+15262307 | Msa1278740:five_prime_UTR |
| GTTTGATGAGTCTGGTTTGA+TGG | 0.354024 | 8_3:+15262120 | Msa1278740:five_prime_UTR |
| CTGTCTACATTTATATATAG+TGG | 0.366904 | 8_3:+15265056 | Msa1278740:three_prime_UTR |
| CAGGGTGGGAATGTGGTGGC+TGG | 0.374383 | 8_3:+15262178 | Msa1278740:five_prime_UTR |
| ATGAAGACGAGAAAAGGTTC+AGG | 0.374801 | 8_3:+15264525 | Msa1278740:CDS |
| AAAATCAGAATTTGAAAGGT+TGG | 0.383448 | 8_3:+15264938 | Msa1278740:three_prime_UTR |
| AGTGGTTTGGGACCCAAGTA+TGG | 0.390417 | 8_3:+15264288 | Msa1278740:CDS |
| GCTAAGGTGTTTGATGAGTC+TGG | 0.404181 | 8_3:+15262112 | Msa1278740:five_prime_UTR |
| GAAAGCGATACTAAGTGGTT+TGG | 0.405886 | 8_3:+15264275 | Msa1278740:CDS |
| TTTGATGAGTCTGGTTTGAT+GGG | 0.408271 | 8_3:+15262121 | Msa1278740:five_prime_UTR |
| CTTGACGAGCTTCGTGAAGA+TGG | 0.408980 | 8_3:-15264086 | None:intergenic |
| CACGGTGGGAATGTGGTAAC+TGG | 0.409472 | 8_3:+15262280 | Msa1278740:five_prime_UTR |
| TCCCTAAGATTGTAGATTGT+CGG | 0.412515 | 8_3:-15264023 | None:intergenic |
| AACTGAGGATGCGTCTGATT+TGG | 0.415902 | 8_3:+15262521 | Msa1278740:CDS |
| GAATGAGTTGTTGTCGGGTC+AGG | 0.421751 | 8_3:+15262159 | Msa1278740:five_prime_UTR |
| TCATGCGGCTGCGCAGTTCC+AGG | 0.424066 | 8_3:+15264377 | Msa1278740:CDS |
| TTCTCAATTTCTTGTCGAAA+GGG | 0.425727 | 8_3:+15264328 | Msa1278740:CDS |
| TTACCATTGGCGTTTCGATA+AGG | 0.427484 | 8_3:+15264472 | Msa1278740:CDS |
| TTGGATTTGTCTGGTGGTGA+TGG | 0.430521 | 8_3:+15262621 | Msa1278740:CDS |
| TCCTGTCTTCCCCTTCCTAT+AGG | 0.432461 | 8_3:-15264353 | None:intergenic |
| TCCTATAGGAAGGGGAAGAC+AGG | 0.433625 | 8_3:+15264352 | Msa1278740:CDS |
| AAAGCGATACTAAGTGGTTT+GGG | 0.433827 | 8_3:+15264276 | Msa1278740:CDS |
| TTGGTGAAGAGCGGTGAGTC+TGG | 0.434679 | 8_3:+15262540 | Msa1278740:CDS |
| ATACAGCCAATGGCCATACT+TGG | 0.437133 | 8_3:-15264301 | None:intergenic |
| AAACATTTCCTAACAAGAGC+AGG | 0.439152 | 8_3:+15264609 | Msa1278740:CDS |
| GTGGAGGGCTTACAGTAATC+AGG | 0.440528 | 8_3:+15262764 | Msa1278740:CDS |
| CTCTGTTTGATATGATGAGT+TGG | 0.453588 | 8_3:+15262679 | Msa1278740:CDS |
| TTTGATGGGGTTTAAGGCTG+AGG | 0.456932 | 8_3:+15262135 | Msa1278740:five_prime_UTR |
| GTGAAGATGTTCGGAATTCG+TGG | 0.464902 | 8_3:+15264498 | Msa1278740:CDS |
| GGTGGCTGGAGAGAAGGTTA+AGG | 0.466762 | 8_3:+15262192 | Msa1278740:five_prime_UTR |
| TATCGGTGATAATATTGTTC+CGG | 0.468339 | 8_3:+15262596 | Msa1278740:CDS |
| GGTAACTGGAGAGAAGGTTA+AGG | 0.476059 | 8_3:+15262294 | Msa1278740:five_prime_UTR |
| GAGAGGATATGAACATTTCT+GGG | 0.477135 | 8_3:+15264574 | Msa1278740:CDS |
| ATTCTCAATTTCTTGTCGAA+AGG | 0.481791 | 8_3:+15264327 | Msa1278740:CDS |
| GTGGCTGGAGAGAAGGTTAA+GGG | 0.482398 | 8_3:+15262193 | Msa1278740:five_prime_UTR |
| GTTCCGGTATTGGATTTGTC+TGG | 0.486514 | 8_3:+15262612 | Msa1278740:CDS |
| GGACAGATGAAGACGAGAAA+AGG | 0.486764 | 8_3:+15264519 | Msa1278740:CDS |
| CTGACACATTCAACAGAACC+TGG | 0.487585 | 8_3:-15264395 | None:intergenic |
| AACGCAAAGCATACCATAGC+AGG | 0.490321 | 8_3:+15264672 | Msa1278740:CDS |
| TGTTCATATCCTCTCTTTGG+AGG | 0.491805 | 8_3:-15264566 | None:intergenic |
| GAATCAAGAAATCCTACATC+GGG | 0.494770 | 8_3:-15262381 | None:intergenic |
| GCATCGGCTCGCATCTGCGT+GGG | 0.496198 | 8_3:+15264206 | Msa1278740:CDS |
| TCTGTTTGATATGATGAGTT+GGG | 0.500139 | 8_3:+15262680 | Msa1278740:CDS |
| GAGAATCATGATGGTGATAT+CGG | 0.501429 | 8_3:+15262579 | Msa1278740:CDS |
| TTGTCTGGTGGTGATGGAAG+TGG | 0.503537 | 8_3:+15262627 | Msa1278740:CDS |
| TCCAGAGTAGCCACATGGAA+AGG | 0.509426 | 8_3:+15264775 | Msa1278740:three_prime_UTR |
| TGGGACCCAAGTATGGCCAT+TGG | 0.513214 | 8_3:+15264295 | Msa1278740:CDS |
| CCTCCTGTGTTGACAAATGT+TGG | 0.518613 | 8_3:-15264810 | None:intergenic |
| ATAAGGTCGGTGAAGATGTT+CGG | 0.518788 | 8_3:+15264489 | Msa1278740:CDS |
| CAAGTCGTCGTGCTGTGAAA+CGG | 0.521739 | 8_3:+15264147 | Msa1278740:CDS |
| GTAACTGGAGAGAAGGTTAA+GGG | 0.523633 | 8_3:+15262295 | Msa1278740:five_prime_UTR |
| GCTAAAGCTAAGCTGGAGTT+AGG | 0.528280 | 8_3:+15264440 | Msa1278740:CDS |
| GAATGTGGTGGCTGGAGAGA+AGG | 0.530094 | 8_3:+15262186 | Msa1278740:five_prime_UTR |
| TCCGACAATCTACAATCTTA+GGG | 0.531884 | 8_3:+15264022 | Msa1278740:CDS |
| TGAGGTGAATGAGTTGTTGT+CGG | 0.533812 | 8_3:+15262153 | Msa1278740:five_prime_UTR |
| AAGGTTAAGGGTGGAGCTGA+TGG | 0.534301 | 8_3:+15262205 | Msa1278740:five_prime_UTR |
| GAAGTGGTTCTAGTCTTAAG+AGG | 0.534929 | 8_3:+15262643 | Msa1278740:CDS |
| CATTGAACAGCAAAATTGGC+AGG | 0.537300 | 8_3:+15262845 | Msa1278740:CDS |
| AATGAGTTGTTGTCGGGTCA+GGG | 0.537370 | 8_3:+15262160 | Msa1278740:five_prime_UTR |
| CCAGAGTAGCCACATGGAAA+GGG | 0.539118 | 8_3:+15264776 | Msa1278740:three_prime_UTR |
| CTGAGTGAGGGTAATGGTGA+TGG | 0.540918 | 8_3:+15262450 | Msa1278740:CDS |
| CTTACAGTAATCAGGAGGCT+TGG | 0.542653 | 8_3:+15262772 | Msa1278740:CDS |
| TAATCAGGAGGCTTGGAAGC+GGG | 0.543149 | 8_3:+15262779 | Msa1278740:CDS |
| TGAGGGTAATGGTGATGGAA+TGG | 0.545924 | 8_3:+15262455 | Msa1278740:CDS |
| GTGCGAATTTCGAGTCTAGT+GGG | 0.546249 | 8_3:+15262245 | Msa1278740:five_prime_UTR |
| AGTTCATCTGTGCTAGGCGA+AGG | 0.552705 | 8_3:+15264107 | Msa1278740:CDS |
| GTCGGGTCAGGGTGGGAATG+TGG | 0.553223 | 8_3:+15262171 | Msa1278740:five_prime_UTR |
| TTACTGTAAGCCCTCCACTT+TGG | 0.553928 | 8_3:-15262759 | None:intergenic |
| CTTGTCGAAAGGGATCCTAT+AGG | 0.556633 | 8_3:+15264338 | Msa1278740:CDS |
| ACGATCAAGTTATAGTAGAT+GGG | 0.556760 | 8_3:+15264184 | Msa1278740:CDS |
| GCGGGTTCTGTTGTTTCGAG+AGG | 0.558329 | 8_3:+15262797 | Msa1278740:CDS |
| TGAAGACGAGAAAAGGTTCA+GGG | 0.560005 | 8_3:+15264526 | Msa1278740:CDS |
| GATGGAGGGAAAATAACTGT+AGG | 0.564686 | 8_3:+15262495 | Msa1278740:CDS |
| GGATTCGGAGCAGTCCACTC+TGG | 0.565588 | 8_3:-15264251 | None:intergenic |
| ATGGTCAGTGATACCGATGT+TGG | 0.565824 | 8_3:+15262423 | Msa1278740:CDS |
| GAGGTGAATGAGTTGTTGTC+GGG | 0.568676 | 8_3:+15262154 | Msa1278740:five_prime_UTR |
| TCGTCAAGTTCATCTGTGCT+AGG | 0.569671 | 8_3:+15264101 | Msa1278740:CDS |
| CAATCTACAATCTTAGGGAG+AGG | 0.570505 | 8_3:+15264027 | Msa1278740:CDS |
| CCACCAGACAAATCCAATAC+CGG | 0.573971 | 8_3:-15262615 | None:intergenic |
| GCCTGAAAAGCCAAAGTGGA+GGG | 0.574127 | 8_3:+15262749 | Msa1278740:CDS |
| AGAAATTCACGGTGGGAATG+TGG | 0.576328 | 8_3:+15262273 | Msa1278740:five_prime_UTR |
| TACAGCCAATGGCCATACTT+GGG | 0.577673 | 8_3:-15264300 | None:intergenic |
| GTGGGATCATCATACATGCT+AGG | 0.577985 | 8_3:-15263999 | None:intergenic |
| CATCGGCTCGCATCTGCGTG+GGG | 0.579313 | 8_3:+15264207 | Msa1278740:CDS |
| ACTGGAGAGAAGGTTAAGGG+TGG | 0.579796 | 8_3:+15262298 | Msa1278740:five_prime_UTR |
| ATCTACAATCTTAGGGAGAG+GGG | 0.580993 | 8_3:+15264029 | Msa1278740:CDS |
| AATCTACAATCTTAGGGAGA+GGG | 0.581096 | 8_3:+15264028 | Msa1278740:CDS |
| GGAAAGCTGAGTGAGGGTAA+TGG | 0.581453 | 8_3:+15262444 | Msa1278740:CDS |
| CCGGTATTGGATTTGTCTGG+TGG | 0.582583 | 8_3:+15262615 | Msa1278740:CDS |
| AAGTTATAGTAGATGGGCAT+CGG | 0.582631 | 8_3:+15264190 | Msa1278740:CDS |
| TACCATAGCAGGCATACACT+TGG | 0.584083 | 8_3:+15264683 | Msa1278740:CDS |
| AACATTTCCTAACAAGAGCA+GGG | 0.584542 | 8_3:+15264610 | Msa1278740:CDS |
| CGACCTTATCGAAACGCCAA+TGG | 0.585564 | 8_3:-15264475 | None:intergenic |
| CTCACTCAGCTTTCCAACAT+CGG | 0.585605 | 8_3:-15262436 | None:intergenic |
| ATGGAGGGAAAATAACTGTA+GGG | 0.586968 | 8_3:+15262496 | Msa1278740:CDS |
| GTTCATATCCTCTCTTTGGA+GGG | 0.587128 | 8_3:-15264565 | None:intergenic |
| TCGAAAGGGATCCTATAGGA+AGG | 0.587509 | 8_3:+15264342 | Msa1278740:CDS |
| CGATGCCTGAAAAGCCAAAG+TGG | 0.588222 | 8_3:+15262745 | Msa1278740:CDS |
| TTGATGAGTCTGGTTTGATG+GGG | 0.588528 | 8_3:+15262122 | Msa1278740:five_prime_UTR |
| GGGTCAGGGTGGGAATGTGG+TGG | 0.588589 | 8_3:+15262174 | Msa1278740:five_prime_UTR |
| GAATGTGGTAACTGGAGAGA+AGG | 0.588966 | 8_3:+15262288 | Msa1278740:five_prime_UTR |
| TTTCACAGCACGACGACTTG+TGG | 0.590229 | 8_3:-15264144 | None:intergenic |
| GAAAGGGATCCTATAGGAAG+GGG | 0.590844 | 8_3:+15264344 | Msa1278740:CDS |
| ATCCTGAAAGCGATACTAAG+TGG | 0.591141 | 8_3:+15264270 | Msa1278740:CDS |
| GGAATCAAGAAATCCTACAT+CGG | 0.595001 | 8_3:-15262382 | None:intergenic |
| CGAAAGGGATCCTATAGGAA+GGG | 0.595912 | 8_3:+15264343 | Msa1278740:CDS |
| AGTTGTTGTCGGGTCAGGGT+GGG | 0.598266 | 8_3:+15262164 | Msa1278740:five_prime_UTR |
| TCATCACTTGGTGACTACAA+AGG | 0.599966 | 8_3:+15265109 | Msa1278740:three_prime_UTR |
| GGCATCGGCTCGCATCTGCG+TGG | 0.600636 | 8_3:+15264205 | Msa1278740:CDS |
| GTAATCAGGAGGCTTGGAAG+CGG | 0.600886 | 8_3:+15262778 | Msa1278740:CDS |
| GAGTCTGGATTGCTGAATGT+TGG | 0.602152 | 8_3:+15262555 | Msa1278740:CDS |
| AGATTGTAGATTGTCGGAGT+GGG | 0.602178 | 8_3:-15264017 | None:intergenic |
| CACCAAGTGTATGCCTGCTA+TGG | 0.604240 | 8_3:-15264685 | None:intergenic |
| ATTCCAGAATGATGAATCGA+GGG | 0.604352 | 8_3:+15262400 | Msa1278740:exon |
| TAGTCTTAAGAGGAAGAGAG+AGG | 0.607309 | 8_3:+15262653 | Msa1278740:CDS |
| CATTGGCGTTTCGATAAGGT+CGG | 0.607511 | 8_3:+15264476 | Msa1278740:CDS |
| AGTGGGGAGAAAGAAATTCA+CGG | 0.609700 | 8_3:+15262262 | Msa1278740:five_prime_UTR |
| CGATGTTGGAAAGCTGAGTG+AGG | 0.609819 | 8_3:+15262437 | Msa1278740:CDS |
| TAGGCGAAGGAGATTTGGAC+GGG | 0.612279 | 8_3:+15264120 | Msa1278740:CDS |
| AGTGCGAATTTCGAGTCTAG+TGG | 0.613148 | 8_3:+15262244 | Msa1278740:five_prime_UTR |
| GATTCCAGAATGATGAATCG+AGG | 0.616855 | 8_3:+15262399 | Msa1278740:exon |
| AGCTAAGCTGGAGTTAGGCG+TGG | 0.617435 | 8_3:+15264445 | Msa1278740:CDS |
| GATGAAAGTTGGTGATGCTA+AGG | 0.617892 | 8_3:+15262096 | None:intergenic |
| TGCCTGAAAAGCCAAAGTGG+AGG | 0.624771 | 8_3:+15262748 | Msa1278740:CDS |
| CAGCTTTACCCTCCAAAGAG+AGG | 0.627360 | 8_3:+15264557 | Msa1278740:CDS |
| GGAACAATTTCAGGATCACA+AGG | 0.631056 | 8_3:-15262723 | None:intergenic |
| CAGAATGATGAATCGAGGGA+TGG | 0.631748 | 8_3:+15262404 | Msa1278740:exon |
| TCTACAATCTTAGGGAGAGG+GGG | 0.633262 | 8_3:+15264030 | Msa1278740:CDS |
| ATCAAGCTGAAGTGCCAGAG+TGG | 0.634304 | 8_3:+15264237 | Msa1278740:CDS |
| TCTTAAGAGGAAGAGAGAGG+AGG | 0.635943 | 8_3:+15262656 | Msa1278740:CDS |
| CCAACATTTGTCAACACAGG+AGG | 0.637631 | 8_3:+15264810 | Msa1278740:three_prime_UTR |
| AATCCAACATTTGTCAACAC+AGG | 0.638035 | 8_3:+15264807 | Msa1278740:three_prime_UTR |
| CTAGGCGAAGGAGATTTGGA+CGG | 0.640028 | 8_3:+15264119 | Msa1278740:CDS |
| AAGATTGTAGATTGTCGGAG+TGG | 0.640461 | 8_3:-15264018 | None:intergenic |
| GAGTTGTTGTCGGGTCAGGG+TGG | 0.642746 | 8_3:+15262163 | Msa1278740:five_prime_UTR |
| TGAGAATTCGATACAGCCAA+TGG | 0.643809 | 8_3:-15264311 | None:intergenic |
| GGGAGAAAGAAATTCACGGT+GGG | 0.651200 | 8_3:+15262266 | Msa1278740:five_prime_UTR |
| GATGTTGGAAAGCTGAGTGA+GGG | 0.661886 | 8_3:+15262438 | Msa1278740:CDS |
| TAGATTCCAGAGTAGCCACA+TGG | 0.665441 | 8_3:+15264770 | Msa1278740:exon |
| TGCGAATTTCGAGTCTAGTG+GGG | 0.671840 | 8_3:+15262246 | Msa1278740:five_prime_UTR |
| AGGGGAAGACAGGATTCATG+CGG | 0.683109 | 8_3:+15264362 | Msa1278740:CDS |
| AATGTTGGCGAGAATCATGA+TGG | 0.684957 | 8_3:+15262570 | Msa1278740:CDS |
| TGGAGCTGATGGTGCTAACG+AGG | 0.694652 | 8_3:+15262216 | Msa1278740:five_prime_UTR |
| GCTGGAGAGAAGGTTAAGGG+TGG | 0.695646 | 8_3:+15262196 | Msa1278740:five_prime_UTR |
| TGGAGTTGATGGTGCTAACG+AGG | 0.697135 | 8_3:+15262318 | Msa1278740:five_prime_UTR |
| GCGTCTGATTTGGTGAAGAG+CGG | 0.702691 | 8_3:+15262531 | Msa1278740:CDS |
| GAGGGCTTACAGTAATCAGG+AGG | 0.703144 | 8_3:+15262767 | Msa1278740:CDS |
| AGGATCACAAGGGTTACTCG+CGG | 0.705433 | 8_3:-15262712 | None:intergenic |
| GAACAATTTCAGGATCACAA+GGG | 0.713883 | 8_3:-15262722 | None:intergenic |
| AATAACTGTAGGGACAACTG+AGG | 0.724458 | 8_3:+15262506 | Msa1278740:CDS |
| GGGGAGAAAGAAATTCACGG+TGG | 0.772176 | 8_3:+15262265 | Msa1278740:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGATTATTAAATTTCATGT+GGG | + | chr8_3:15263250-15263269 | Msa1278740:intron | 15.0% |
| !!! | ATATACATCATAGATTTTAA+AGG | + | chr8_3:15264911-15264930 | Msa1278740:three_prime_UTR | 15.0% |
| !!! | TATACATCATAGATTTTAAA+GGG | + | chr8_3:15264912-15264931 | Msa1278740:three_prime_UTR | 15.0% |
| !!! | CAATTTAAGTTTAGTTAACT+CGG | - | chr8_3:15262897-15262916 | None:intergenic | 20.0% |
| !! | TTTCATGTGTAAATGATAAT+TGG | + | chr8_3:15263101-15263120 | Msa1278740:intron | 20.0% |
| !! | TGAAATTTAATAATCATCAG+TGG | - | chr8_3:15263247-15263266 | None:intergenic | 20.0% |
| !! | GATGATTATTAAATTTCATG+TGG | + | chr8_3:15263249-15263268 | Msa1278740:intron | 20.0% |
| !! | ATCACAAAATTAAATCATGA+AGG | - | chr8_3:15263392-15263411 | None:intergenic | 20.0% |
| !!! | AATATCTCAGCATTTTTTTT+CGG | - | chr8_3:15263513-15263532 | None:intergenic | 20.0% |
| !!! | TGTTTTTAGTTAGTTAATGT+TGG | + | chr8_3:15263592-15263611 | Msa1278740:intron | 20.0% |
| !!! | GTTTTTAGTTAGTTAATGTT+GGG | + | chr8_3:15263593-15263612 | Msa1278740:intron | 20.0% |
| !!! | TGTTGTTGTTATATTAAAAG+TGG | + | chr8_3:15263677-15263696 | Msa1278740:intron | 20.0% |
| !!! | AACCATGCTTTAAATAAAAA+GGG | - | chr8_3:15263730-15263749 | None:intergenic | 20.0% |
| !!! | TAACCATGCTTTAAATAAAA+AGG | - | chr8_3:15263731-15263750 | None:intergenic | 20.0% |
| !!! | CGTATTTTTTAGAGTAATAA+AGG | + | chr8_3:15263856-15263875 | Msa1278740:intron | 20.0% |
| !! | GTTAAAAATCAGAATTTGAA+AGG | + | chr8_3:15264934-15264953 | Msa1278740:three_prime_UTR | 20.0% |
| !! | AAAATATGATATGCAATCTA+TGG | - | chr8_3:15265082-15265101 | None:intergenic | 20.0% |
| !!! | ATTTTCATTTTTTCATCACT+TGG | + | chr8_3:15265097-15265116 | Msa1278740:three_prime_UTR | 20.0% |
| ! | ATTCAATTAATTTACTTCCC+AGG | - | chr8_3:15262967-15262986 | None:intergenic | 25.0% |
| ! | AACAGTTGACATTAAAACTT+GGG | - | chr8_3:15263172-15263191 | None:intergenic | 25.0% |
| ! | TAACAGTTGACATTAAAACT+TGG | - | chr8_3:15263173-15263192 | None:intergenic | 25.0% |
| ! | AAAGAAAATAAACTGACAAG+TGG | - | chr8_3:15263277-15263296 | None:intergenic | 25.0% |
| !!! | TCTTTCTGAAACATTCATAT+TGG | + | chr8_3:15263292-15263311 | Msa1278740:intron | 25.0% |
| ! | ATTTGGATTGAGAAAATTGT+TGG | + | chr8_3:15263458-15263477 | Msa1278740:intron | 25.0% |
| !! | GAGATATTGTCATAGTATTT+TGG | + | chr8_3:15263525-15263544 | Msa1278740:intron | 25.0% |
| ! | ATTCAGTTTCCTTACTATTA+AGG | + | chr8_3:15263646-15263665 | Msa1278740:intron | 25.0% |
| ! | AATAACACACCTTAATAGTA+AGG | - | chr8_3:15263658-15263677 | None:intergenic | 25.0% |
| ! | TTGTTATATTAAAAGTGGCA+AGG | + | chr8_3:15263682-15263701 | Msa1278740:intron | 25.0% |
| ! | ATGGTTAACTTATGCATTTA+TGG | + | chr8_3:15263744-15263763 | Msa1278740:intron | 25.0% |
| ! | TGGTTAACTTATGCATTTAT+GGG | + | chr8_3:15263745-15263764 | Msa1278740:intron | 25.0% |
| ! | AAGTATCTAAATTGAATTGC+AGG | + | chr8_3:15263818-15263837 | Msa1278740:intron | 25.0% |
| ! | AGTAATAAAGGTTTATTAGC+TGG | + | chr8_3:15263868-15263887 | Msa1278740:intron | 25.0% |
| ! | GTTAATGCAAAAGGAAATTT+AGG | - | chr8_3:15263939-15263958 | None:intergenic | 25.0% |
| !! | TGCAAAATTATACAAGGTTT+TGG | - | chr8_3:15263963-15263982 | None:intergenic | 25.0% |
| ! | AAAATCAGAATTTGAAAGGT+TGG | + | chr8_3:15264938-15264957 | Msa1278740:three_prime_UTR | 25.0% |
| ! | CTGTCTACATTTATATATAG+TGG | + | chr8_3:15265056-15265075 | Msa1278740:three_prime_UTR | 25.0% |
| !!! | AGAAGCTTTTTAGAAATACA+GGG | + | chr8_3:15265143-15265162 | Msa1278740:three_prime_UTR | 25.0% |
| ! | GAAGTAGTTGAAGATTTTGA+TGG | + | chr8_3:15262477-15262496 | Msa1278740:CDS | 30.0% |
| !! | TAGTTGAAGATTTTGATGGA+GGG | + | chr8_3:15262481-15262500 | Msa1278740:CDS | 30.0% |
| TATCGGTGATAATATTGTTC+CGG | + | chr8_3:15262596-15262615 | Msa1278740:CDS | 30.0% | |
| TGATAATATTGTTCCGGTAT+TGG | + | chr8_3:15262602-15262621 | Msa1278740:CDS | 30.0% | |
| TCTGTTTGATATGATGAGTT+GGG | + | chr8_3:15262680-15262699 | Msa1278740:CDS | 30.0% | |
| ! | TGTAATTGTTCTGTTTCTCA+AGG | + | chr8_3:15263069-15263088 | Msa1278740:intron | 30.0% |
| !! | AGTTTCATTTAGTTTGCTGA+GGG | + | chr8_3:15263194-15263213 | Msa1278740:intron | 30.0% |
| TATGAAGACAGAATTTAAGC+TGG | - | chr8_3:15263368-15263387 | None:intergenic | 30.0% | |
| ATGCTAATGAGATGTGTATT+TGG | + | chr8_3:15263441-15263460 | Msa1278740:intron | 30.0% | |
| TAAATAAAAAGGGCCCATAA+TGG | - | chr8_3:15263720-15263739 | None:intergenic | 30.0% | |
| AATGTATGCTATCCCAAAAA+GGG | - | chr8_3:15263771-15263790 | None:intergenic | 30.0% | |
| TGACTCTGCAAAATTATACA+AGG | - | chr8_3:15263969-15263988 | None:intergenic | 30.0% | |
| ACGATCAAGTTATAGTAGAT+GGG | + | chr8_3:15264184-15264203 | Msa1278740:CDS | 30.0% | |
| ATTCTCAATTTCTTGTCGAA+AGG | + | chr8_3:15264327-15264346 | Msa1278740:CDS | 30.0% | |
| TTCTCAATTTCTTGTCGAAA+GGG | + | chr8_3:15264328-15264347 | Msa1278740:CDS | 30.0% | |
| !!! | TAGCTTTTTTCTCAGAAATG+TGG | - | chr8_3:15264424-15264443 | None:intergenic | 30.0% |
| AAATGTTCATATCCTCTCTT+TGG | - | chr8_3:15264572-15264591 | None:intergenic | 30.0% | |
| !! | TCTGATTTGAAGAAGCTTTT+TGG | + | chr8_3:15264737-15264756 | Msa1278740:CDS | 30.0% |
| ! | TTCTAAAAAGCTTCTGTTTC+AGG | - | chr8_3:15265138-15265157 | None:intergenic | 30.0% |
| !! | CAGAAGCTTTTTAGAAATAC+AGG | + | chr8_3:15265142-15265161 | Msa1278740:three_prime_UTR | 30.0% |
| ! | ACAGGGAAATTTTATTGTAG+AGG | + | chr8_3:15265160-15265179 | Msa1278740:three_prime_UTR | 30.0% |
| ! | CAGGGAAATTTTATTGTAGA+GGG | + | chr8_3:15265161-15265180 | Msa1278740:three_prime_UTR | 30.0% |
| ! | TTTGATGAGTCTGGTTTGAT+GGG | + | chr8_3:15262121-15262140 | Msa1278740:five_prime_UTR | 35.0% |
| !! | AAGAGTGTGAATTTTGAGTC+TGG | + | chr8_3:15262343-15262362 | Msa1278740:five_prime_UTR | 35.0% |
| GAATCAAGAAATCCTACATC+GGG | - | chr8_3:15262384-15262403 | None:intergenic | 35.0% | |
| GGAATCAAGAAATCCTACAT+CGG | - | chr8_3:15262385-15262404 | None:intergenic | 35.0% | |
| ATTCCAGAATGATGAATCGA+GGG | + | chr8_3:15262400-15262419 | Msa1278740:exon | 35.0% | |
| !! | GTAGTTGAAGATTTTGATGG+AGG | + | chr8_3:15262480-15262499 | Msa1278740:CDS | 35.0% |
| ATGGAGGGAAAATAACTGTA+GGG | + | chr8_3:15262496-15262515 | Msa1278740:CDS | 35.0% | |
| ! | GAGAATCATGATGGTGATAT+CGG | + | chr8_3:15262579-15262598 | Msa1278740:CDS | 35.0% |
| CTCTGTTTGATATGATGAGT+TGG | + | chr8_3:15262679-15262698 | Msa1278740:CDS | 35.0% | |
| GAACAATTTCAGGATCACAA+GGG | - | chr8_3:15262725-15262744 | None:intergenic | 35.0% | |
| TGCTTGAAATTTAGTAGACC+TGG | + | chr8_3:15262946-15262965 | Msa1278740:intron | 35.0% | |
| GCTTGAAATTTAGTAGACCT+GGG | + | chr8_3:15262947-15262966 | Msa1278740:intron | 35.0% | |
| !! | CAGTTTCATTTAGTTTGCTG+AGG | + | chr8_3:15263193-15263212 | Msa1278740:intron | 35.0% |
| !! | GTTTCATTTAGTTTGCTGAG+GGG | + | chr8_3:15263195-15263214 | Msa1278740:intron | 35.0% |
| GCAAACATTCTCACCATTAT+GGG | + | chr8_3:15263704-15263723 | Msa1278740:intron | 35.0% | |
| !! | GGCCCTTTTTATTTAAAGCA+TGG | + | chr8_3:15263725-15263744 | Msa1278740:intron | 35.0% |
| CAATGTATGCTATCCCAAAA+AGG | - | chr8_3:15263772-15263791 | None:intergenic | 35.0% | |
| !!! | GGTTTTGGTGTTAATGCAAA+AGG | - | chr8_3:15263948-15263967 | None:intergenic | 35.0% |
| TCCGACAATCTACAATCTTA+GGG | + | chr8_3:15264022-15264041 | Msa1278740:CDS | 35.0% | |
| TCCCTAAGATTGTAGATTGT+CGG | - | chr8_3:15264026-15264045 | None:intergenic | 35.0% | |
| AATCTACAATCTTAGGGAGA+GGG | + | chr8_3:15264028-15264047 | Msa1278740:CDS | 35.0% | |
| GACGATCAAGTTATAGTAGA+TGG | + | chr8_3:15264183-15264202 | Msa1278740:CDS | 35.0% | |
| AAGTTATAGTAGATGGGCAT+CGG | + | chr8_3:15264190-15264209 | Msa1278740:CDS | 35.0% | |
| TTAGTATCGCTTTCAGGATT+CGG | - | chr8_3:15264269-15264288 | None:intergenic | 35.0% | |
| AAAGCGATACTAAGTGGTTT+GGG | + | chr8_3:15264276-15264295 | Msa1278740:CDS | 35.0% | |
| GAAAAAAGCTAAAGCTAAGC+TGG | + | chr8_3:15264433-15264452 | Msa1278740:CDS | 35.0% | |
| AGAGAGGATATGAACATTTC+TGG | + | chr8_3:15264573-15264592 | Msa1278740:CDS | 35.0% | |
| GAGAGGATATGAACATTTCT+GGG | + | chr8_3:15264574-15264593 | Msa1278740:CDS | 35.0% | |
| AAACATTTCCTAACAAGAGC+AGG | + | chr8_3:15264609-15264628 | Msa1278740:CDS | 35.0% | |
| AACATTTCCTAACAAGAGCA+GGG | + | chr8_3:15264610-15264629 | Msa1278740:CDS | 35.0% | |
| AATCCAACATTTGTCAACAC+AGG | + | chr8_3:15264807-15264826 | Msa1278740:three_prime_UTR | 35.0% | |
| !!! | GAAAGGTTGGTTTGTTGTTT+TGG | + | chr8_3:15264951-15264970 | Msa1278740:three_prime_UTR | 35.0% |
| !!! | TTTGTTGTTTTGGTCATGTC+TGG | + | chr8_3:15264961-15264980 | Msa1278740:three_prime_UTR | 35.0% |
| ! | CTAGTATGCTTCAGATTTTG+AGG | + | chr8_3:15265021-15265040 | Msa1278740:three_prime_UTR | 35.0% |
| ! | GTTTGATGAGTCTGGTTTGA+TGG | + | chr8_3:15262120-15262139 | Msa1278740:five_prime_UTR | 40.0% |
| ! | TTGATGAGTCTGGTTTGATG+GGG | + | chr8_3:15262122-15262141 | Msa1278740:five_prime_UTR | 40.0% |
| TGAGGTGAATGAGTTGTTGT+CGG | + | chr8_3:15262153-15262172 | Msa1278740:five_prime_UTR | 40.0% | |
| AGTGGGGAGAAAGAAATTCA+CGG | + | chr8_3:15262262-15262281 | Msa1278740:five_prime_UTR | 40.0% | |
| GTAACTGGAGAGAAGGTTAA+GGG | + | chr8_3:15262295-15262314 | Msa1278740:five_prime_UTR | 40.0% | |
| !! | AGTGTGAATTTTGAGTCTGG+TGG | + | chr8_3:15262346-15262365 | Msa1278740:five_prime_UTR | 40.0% |
| !! | GTGTGAATTTTGAGTCTGGT+GGG | + | chr8_3:15262347-15262366 | Msa1278740:five_prime_UTR | 40.0% |
| !! | TGTGAATTTTGAGTCTGGTG+GGG | + | chr8_3:15262348-15262367 | Msa1278740:five_prime_UTR | 40.0% |
| GATTCCAGAATGATGAATCG+AGG | + | chr8_3:15262399-15262418 | Msa1278740:exon | 40.0% | |
| GATGGAGGGAAAATAACTGT+AGG | + | chr8_3:15262495-15262514 | Msa1278740:CDS | 40.0% | |
| AATAACTGTAGGGACAACTG+AGG | + | chr8_3:15262506-15262525 | Msa1278740:CDS | 40.0% | |
| AATGTTGGCGAGAATCATGA+TGG | + | chr8_3:15262570-15262589 | Msa1278740:CDS | 40.0% | |
| !! | GAAGTGGTTCTAGTCTTAAG+AGG | + | chr8_3:15262643-15262662 | Msa1278740:CDS | 40.0% |
| ! | TAGTCTTAAGAGGAAGAGAG+AGG | + | chr8_3:15262653-15262672 | Msa1278740:CDS | 40.0% |
| GGAACAATTTCAGGATCACA+AGG | - | chr8_3:15262726-15262745 | None:intergenic | 40.0% | |
| !! | CGAGCATTGAACAGCAAAAT+TGG | + | chr8_3:15262841-15262860 | Msa1278740:CDS | 40.0% |
| CATTGAACAGCAAAATTGGC+AGG | + | chr8_3:15262845-15262864 | Msa1278740:CDS | 40.0% | |
| ! | GCACTTGTTAGTTGTTACTG+TGG | + | chr8_3:15263126-15263145 | Msa1278740:intron | 40.0% |
| GGCAAACATTCTCACCATTA+TGG | + | chr8_3:15263703-15263722 | Msa1278740:intron | 40.0% | |
| ! | ATGCATTTATGGGCCCTTTT+TGG | + | chr8_3:15263755-15263774 | Msa1278740:intron | 40.0% |
| ! | TGCATTTATGGGCCCTTTTT+GGG | + | chr8_3:15263756-15263775 | Msa1278740:intron | 40.0% |
| !! | GATAGCATACATTGACTTGC+AGG | + | chr8_3:15263778-15263797 | Msa1278740:intron | 40.0% |
| AGATTGTAGATTGTCGGAGT+GGG | - | chr8_3:15264020-15264039 | None:intergenic | 40.0% | |
| AAGATTGTAGATTGTCGGAG+TGG | - | chr8_3:15264021-15264040 | None:intergenic | 40.0% | |
| CTCCGACAATCTACAATCTT+AGG | + | chr8_3:15264021-15264040 | Msa1278740:CDS | 40.0% | |
| CAATCTACAATCTTAGGGAG+AGG | + | chr8_3:15264027-15264046 | Msa1278740:CDS | 40.0% | |
| ATCTACAATCTTAGGGAGAG+GGG | + | chr8_3:15264029-15264048 | Msa1278740:CDS | 40.0% | |
| ATCCTGAAAGCGATACTAAG+TGG | + | chr8_3:15264270-15264289 | Msa1278740:CDS | 40.0% | |
| AACCACTTAGTATCGCTTTC+AGG | - | chr8_3:15264275-15264294 | None:intergenic | 40.0% | |
| GAAAGCGATACTAAGTGGTT+TGG | + | chr8_3:15264275-15264294 | Msa1278740:CDS | 40.0% | |
| TGAGAATTCGATACAGCCAA+TGG | - | chr8_3:15264314-15264333 | None:intergenic | 40.0% | |
| TTACCATTGGCGTTTCGATA+AGG | + | chr8_3:15264472-15264491 | Msa1278740:CDS | 40.0% | |
| ATAAGGTCGGTGAAGATGTT+CGG | + | chr8_3:15264489-15264508 | Msa1278740:CDS | 40.0% | |
| ATGAAGACGAGAAAAGGTTC+AGG | + | chr8_3:15264525-15264544 | Msa1278740:CDS | 40.0% | |
| TGAAGACGAGAAAAGGTTCA+GGG | + | chr8_3:15264526-15264545 | Msa1278740:CDS | 40.0% | |
| GTTCATATCCTCTCTTTGGA+GGG | - | chr8_3:15264568-15264587 | None:intergenic | 40.0% | |
| TGTTCATATCCTCTCTTTGG+AGG | - | chr8_3:15264569-15264588 | None:intergenic | 40.0% | |
| AAAGTTTCCCTGCTCTTGTT+AGG | - | chr8_3:15264620-15264639 | None:intergenic | 40.0% | |
| ! | TGAAGAAGCTTTTTGGACGT+CGG | + | chr8_3:15264744-15264763 | Msa1278740:CDS | 40.0% |
| !!! | TGCTATTTTCCCTTTCCATG+TGG | - | chr8_3:15264788-15264807 | None:intergenic | 40.0% |
| ! | TCATCACTTGGTGACTACAA+AGG | + | chr8_3:15265109-15265128 | Msa1278740:three_prime_UTR | 40.0% |
| ! | GCTAAGGTGTTTGATGAGTC+TGG | + | chr8_3:15262112-15262131 | Msa1278740:five_prime_UTR | 45.0% |
| ! | GTCTGGTTTGATGGGGTTTA+AGG | + | chr8_3:15262129-15262148 | Msa1278740:five_prime_UTR | 45.0% |
| ! | TTTGATGGGGTTTAAGGCTG+AGG | + | chr8_3:15262135-15262154 | Msa1278740:five_prime_UTR | 45.0% |
| GAGGTGAATGAGTTGTTGTC+GGG | + | chr8_3:15262154-15262173 | Msa1278740:five_prime_UTR | 45.0% | |
| AATGAGTTGTTGTCGGGTCA+GGG | + | chr8_3:15262160-15262179 | Msa1278740:five_prime_UTR | 45.0% | |
| ! | AGTGCGAATTTCGAGTCTAG+TGG | + | chr8_3:15262244-15262263 | Msa1278740:five_prime_UTR | 45.0% |
| ! | GTGCGAATTTCGAGTCTAGT+GGG | + | chr8_3:15262245-15262264 | Msa1278740:five_prime_UTR | 45.0% |
| ! | TGCGAATTTCGAGTCTAGTG+GGG | + | chr8_3:15262246-15262265 | Msa1278740:five_prime_UTR | 45.0% |
| GGGAGAAAGAAATTCACGGT+GGG | + | chr8_3:15262266-15262285 | Msa1278740:five_prime_UTR | 45.0% | |
| AGAAATTCACGGTGGGAATG+TGG | + | chr8_3:15262273-15262292 | Msa1278740:five_prime_UTR | 45.0% | |
| GAATGTGGTAACTGGAGAGA+AGG | + | chr8_3:15262288-15262307 | Msa1278740:five_prime_UTR | 45.0% | |
| GGTAACTGGAGAGAAGGTTA+AGG | + | chr8_3:15262294-15262313 | Msa1278740:five_prime_UTR | 45.0% | |
| AAGGTTAAGGGTGGAGTTGA+TGG | + | chr8_3:15262307-15262326 | Msa1278740:five_prime_UTR | 45.0% | |
| GGTGAAAAAGTTCCCGATGT+AGG | + | chr8_3:15262369-15262388 | Msa1278740:five_prime_UTR | 45.0% | |
| CATCCCTCGATTCATCATTC+TGG | - | chr8_3:15262406-15262425 | None:intergenic | 45.0% | |
| CAGAATGATGAATCGAGGGA+TGG | + | chr8_3:15262404-15262423 | Msa1278740:exon | 45.0% | |
| ATGGTCAGTGATACCGATGT+TGG | + | chr8_3:15262423-15262442 | Msa1278740:CDS | 45.0% | |
| CTCACTCAGCTTTCCAACAT+CGG | - | chr8_3:15262439-15262458 | None:intergenic | 45.0% | |
| GATGTTGGAAAGCTGAGTGA+GGG | + | chr8_3:15262438-15262457 | Msa1278740:CDS | 45.0% | |
| !! | TGAGGGTAATGGTGATGGAA+TGG | + | chr8_3:15262455-15262474 | Msa1278740:CDS | 45.0% |
| AACTGAGGATGCGTCTGATT+TGG | + | chr8_3:15262521-15262540 | Msa1278740:CDS | 45.0% | |
| GAGTCTGGATTGCTGAATGT+TGG | + | chr8_3:15262555-15262574 | Msa1278740:CDS | 45.0% | |
| ! | GTTCCGGTATTGGATTTGTC+TGG | + | chr8_3:15262612-15262631 | Msa1278740:CDS | 45.0% |
| CCACCAGACAAATCCAATAC+CGG | - | chr8_3:15262618-15262637 | None:intergenic | 45.0% | |
| ! | TTGGATTTGTCTGGTGGTGA+TGG | + | chr8_3:15262621-15262640 | Msa1278740:CDS | 45.0% |
| TCTTAAGAGGAAGAGAGAGG+AGG | + | chr8_3:15262656-15262675 | Msa1278740:CDS | 45.0% | |
| !! | TCAGGCATCGGAACAATTTC+AGG | - | chr8_3:15262735-15262754 | None:intergenic | 45.0% |
| !!! | CACTTTGGCTTTTCAGGCAT+CGG | - | chr8_3:15262747-15262766 | None:intergenic | 45.0% |
| TTACTGTAAGCCCTCCACTT+TGG | - | chr8_3:15262762-15262781 | None:intergenic | 45.0% | |
| CTTACAGTAATCAGGAGGCT+TGG | + | chr8_3:15262772-15262791 | Msa1278740:CDS | 45.0% | |
| GTGGGATCATCATACATGCT+AGG | - | chr8_3:15264002-15264021 | None:intergenic | 45.0% | |
| TCTACAATCTTAGGGAGAGG+GGG | + | chr8_3:15264030-15264049 | Msa1278740:CDS | 45.0% | |
| TCGTCAAGTTCATCTGTGCT+AGG | + | chr8_3:15264101-15264120 | Msa1278740:CDS | 45.0% | |
| TACAGCCAATGGCCATACTT+GGG | - | chr8_3:15264303-15264322 | None:intergenic | 45.0% | |
| ATACAGCCAATGGCCATACT+TGG | - | chr8_3:15264304-15264323 | None:intergenic | 45.0% | |
| CTTGTCGAAAGGGATCCTAT+AGG | + | chr8_3:15264338-15264357 | Msa1278740:CDS | 45.0% | |
| TCGAAAGGGATCCTATAGGA+AGG | + | chr8_3:15264342-15264361 | Msa1278740:CDS | 45.0% | |
| CGAAAGGGATCCTATAGGAA+GGG | + | chr8_3:15264343-15264362 | Msa1278740:CDS | 45.0% | |
| GAAAGGGATCCTATAGGAAG+GGG | + | chr8_3:15264344-15264363 | Msa1278740:CDS | 45.0% | |
| CTGACACATTCAACAGAACC+TGG | - | chr8_3:15264398-15264417 | None:intergenic | 45.0% | |
| GCTAAAGCTAAGCTGGAGTT+AGG | + | chr8_3:15264440-15264459 | Msa1278740:CDS | 45.0% | |
| ! | TAGGCGTGGCTTTTTACCAT+TGG | + | chr8_3:15264459-15264478 | Msa1278740:CDS | 45.0% |
| CATTGGCGTTTCGATAAGGT+CGG | + | chr8_3:15264476-15264495 | Msa1278740:CDS | 45.0% | |
| GTGAAGATGTTCGGAATTCG+TGG | + | chr8_3:15264498-15264517 | Msa1278740:CDS | 45.0% | |
| GGACAGATGAAGACGAGAAA+AGG | + | chr8_3:15264519-15264538 | Msa1278740:CDS | 45.0% | |
| TATGGTATGCTTTGCGTTGC+AGG | - | chr8_3:15264670-15264689 | None:intergenic | 45.0% | |
| AACGCAAAGCATACCATAGC+AGG | + | chr8_3:15264672-15264691 | Msa1278740:CDS | 45.0% | |
| TACCATAGCAGGCATACACT+TGG | + | chr8_3:15264683-15264702 | Msa1278740:CDS | 45.0% | |
| ! | GAAGAAGCTTTTTGGACGTC+GGG | + | chr8_3:15264745-15264764 | Msa1278740:CDS | 45.0% |
| ! | AAGAAGCTTTTTGGACGTCG+GGG | + | chr8_3:15264746-15264765 | Msa1278740:CDS | 45.0% |
| TAGATTCCAGAGTAGCCACA+TGG | + | chr8_3:15264770-15264789 | Msa1278740:exon | 45.0% | |
| ! | CCTCCTGTGTTGACAAATGT+TGG | - | chr8_3:15264813-15264832 | None:intergenic | 45.0% |
| CCAACATTTGTCAACACAGG+AGG | + | chr8_3:15264810-15264829 | Msa1278740:three_prime_UTR | 45.0% | |
| !! | GTTCGTGTTTTGAACAGCGT+AGG | + | chr8_3:15264987-15265006 | Msa1278740:three_prime_UTR | 45.0% |
| GAATGAGTTGTTGTCGGGTC+AGG | + | chr8_3:15262159-15262178 | Msa1278740:five_prime_UTR | 50.0% | |
| GTGGCTGGAGAGAAGGTTAA+GGG | + | chr8_3:15262193-15262212 | Msa1278740:five_prime_UTR | 50.0% | |
| AAGGTTAAGGGTGGAGCTGA+TGG | + | chr8_3:15262205-15262224 | Msa1278740:five_prime_UTR | 50.0% | |
| GGGGAGAAAGAAATTCACGG+TGG | + | chr8_3:15262265-15262284 | Msa1278740:five_prime_UTR | 50.0% | |
| ACTGGAGAGAAGGTTAAGGG+TGG | + | chr8_3:15262298-15262317 | Msa1278740:five_prime_UTR | 50.0% | |
| !! | TGGAGTTGATGGTGCTAACG+AGG | + | chr8_3:15262318-15262337 | Msa1278740:five_prime_UTR | 50.0% |
| CGATGTTGGAAAGCTGAGTG+AGG | + | chr8_3:15262437-15262456 | Msa1278740:CDS | 50.0% | |
| GGAAAGCTGAGTGAGGGTAA+TGG | + | chr8_3:15262444-15262463 | Msa1278740:CDS | 50.0% | |
| ! | CTGAGTGAGGGTAATGGTGA+TGG | + | chr8_3:15262450-15262469 | Msa1278740:CDS | 50.0% |
| !! | GCGTCTGATTTGGTGAAGAG+CGG | + | chr8_3:15262531-15262550 | Msa1278740:CDS | 50.0% |
| ! | CCGGTATTGGATTTGTCTGG+TGG | + | chr8_3:15262615-15262634 | Msa1278740:CDS | 50.0% |
| !! | TTGTCTGGTGGTGATGGAAG+TGG | + | chr8_3:15262627-15262646 | Msa1278740:CDS | 50.0% |
| AGGATCACAAGGGTTACTCG+CGG | - | chr8_3:15262715-15262734 | None:intergenic | 50.0% | |
| CGATGCCTGAAAAGCCAAAG+TGG | + | chr8_3:15262745-15262764 | Msa1278740:CDS | 50.0% | |
| TGCCTGAAAAGCCAAAGTGG+AGG | + | chr8_3:15262748-15262767 | Msa1278740:CDS | 50.0% | |
| GCCTGAAAAGCCAAAGTGGA+GGG | + | chr8_3:15262749-15262768 | Msa1278740:CDS | 50.0% | |
| GTGGAGGGCTTACAGTAATC+AGG | + | chr8_3:15262764-15262783 | Msa1278740:CDS | 50.0% | |
| GAGGGCTTACAGTAATCAGG+AGG | + | chr8_3:15262767-15262786 | Msa1278740:CDS | 50.0% | |
| GTAATCAGGAGGCTTGGAAG+CGG | + | chr8_3:15262778-15262797 | Msa1278740:CDS | 50.0% | |
| TAATCAGGAGGCTTGGAAGC+GGG | + | chr8_3:15262779-15262798 | Msa1278740:CDS | 50.0% | |
| CTTGACGAGCTTCGTGAAGA+TGG | - | chr8_3:15264089-15264108 | None:intergenic | 50.0% | |
| AGTTCATCTGTGCTAGGCGA+AGG | + | chr8_3:15264107-15264126 | Msa1278740:CDS | 50.0% | |
| TGTGCTAGGCGAAGGAGATT+TGG | + | chr8_3:15264115-15264134 | Msa1278740:CDS | 50.0% | |
| CTAGGCGAAGGAGATTTGGA+CGG | + | chr8_3:15264119-15264138 | Msa1278740:CDS | 50.0% | |
| TAGGCGAAGGAGATTTGGAC+GGG | + | chr8_3:15264120-15264139 | Msa1278740:CDS | 50.0% | |
| TTTCACAGCACGACGACTTG+TGG | - | chr8_3:15264147-15264166 | None:intergenic | 50.0% | |
| CAAGTCGTCGTGCTGTGAAA+CGG | + | chr8_3:15264147-15264166 | Msa1278740:CDS | 50.0% | |
| ! | ATCAAGCTGAAGTGCCAGAG+TGG | + | chr8_3:15264237-15264256 | Msa1278740:CDS | 50.0% |
| ! | AGTGGTTTGGGACCCAAGTA+TGG | + | chr8_3:15264288-15264307 | Msa1278740:CDS | 50.0% |
| TCCTATAGGAAGGGGAAGAC+AGG | + | chr8_3:15264352-15264371 | Msa1278740:CDS | 50.0% | |
| TCCTGTCTTCCCCTTCCTAT+AGG | - | chr8_3:15264356-15264375 | None:intergenic | 50.0% | |
| AGGGGAAGACAGGATTCATG+CGG | + | chr8_3:15264362-15264381 | Msa1278740:CDS | 50.0% | |
| CGACCTTATCGAAACGCCAA+TGG | - | chr8_3:15264478-15264497 | None:intergenic | 50.0% | |
| CAGCTTTACCCTCCAAAGAG+AGG | + | chr8_3:15264557-15264576 | Msa1278740:CDS | 50.0% | |
| CACCAAGTGTATGCCTGCTA+TGG | - | chr8_3:15264688-15264707 | None:intergenic | 50.0% | |
| TCCAGAGTAGCCACATGGAA+AGG | + | chr8_3:15264775-15264794 | Msa1278740:three_prime_UTR | 50.0% | |
| CCAGAGTAGCCACATGGAAA+GGG | + | chr8_3:15264776-15264795 | Msa1278740:three_prime_UTR | 50.0% | |
| AGTTGTTGTCGGGTCAGGGT+GGG | + | chr8_3:15262164-15262183 | Msa1278740:five_prime_UTR | 55.0% | |
| GAATGTGGTGGCTGGAGAGA+AGG | + | chr8_3:15262186-15262205 | Msa1278740:five_prime_UTR | 55.0% | |
| GGTGGCTGGAGAGAAGGTTA+AGG | + | chr8_3:15262192-15262211 | Msa1278740:five_prime_UTR | 55.0% | |
| GCTGGAGAGAAGGTTAAGGG+TGG | + | chr8_3:15262196-15262215 | Msa1278740:five_prime_UTR | 55.0% | |
| ! | TGGAGCTGATGGTGCTAACG+AGG | + | chr8_3:15262216-15262235 | Msa1278740:five_prime_UTR | 55.0% |
| CACGGTGGGAATGTGGTAAC+TGG | + | chr8_3:15262280-15262299 | Msa1278740:five_prime_UTR | 55.0% | |
| TTGGTGAAGAGCGGTGAGTC+TGG | + | chr8_3:15262540-15262559 | Msa1278740:CDS | 55.0% | |
| !!! | GCCCTCCACTTTGGCTTTTC+AGG | - | chr8_3:15262753-15262772 | None:intergenic | 55.0% |
| !! | GCGGGTTCTGTTGTTTCGAG+AGG | + | chr8_3:15262797-15262816 | Msa1278740:CDS | 55.0% |
| TGGGACCCAAGTATGGCCAT+TGG | + | chr8_3:15264295-15264314 | Msa1278740:CDS | 55.0% | |
| AGCTAAGCTGGAGTTAGGCG+TGG | + | chr8_3:15264445-15264464 | Msa1278740:CDS | 55.0% | |
| CCCTTTCCATGTGGCTACTC+TGG | - | chr8_3:15264779-15264798 | None:intergenic | 55.0% | |
| GAGTTGTTGTCGGGTCAGGG+TGG | + | chr8_3:15262163-15262182 | Msa1278740:five_prime_UTR | 60.0% | |
| GGATTCGGAGCAGTCCACTC+TGG | - | chr8_3:15264254-15264273 | None:intergenic | 60.0% | |
| GTCGGGTCAGGGTGGGAATG+TGG | + | chr8_3:15262171-15262190 | Msa1278740:five_prime_UTR | 65.0% | |
| GGGTCAGGGTGGGAATGTGG+TGG | + | chr8_3:15262174-15262193 | Msa1278740:five_prime_UTR | 65.0% | |
| CAGGGTGGGAATGTGGTGGC+TGG | + | chr8_3:15262178-15262197 | Msa1278740:five_prime_UTR | 65.0% | |
| !! | GCATCGGCTCGCATCTGCGT+GGG | + | chr8_3:15264206-15264225 | Msa1278740:CDS | 65.0% |
| !! | CATCGGCTCGCATCTGCGTG+GGG | + | chr8_3:15264207-15264226 | Msa1278740:CDS | 65.0% |
| TCATGCGGCTGCGCAGTTCC+AGG | + | chr8_3:15264377-15264396 | Msa1278740:CDS | 65.0% | |
| !! | GGCATCGGCTCGCATCTGCG+TGG | + | chr8_3:15264205-15264224 | Msa1278740:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 15262108 | 15265201 | 15262108 | ID=Msa1278740;Name=Msa1278740 |
| chr8_3 | mRNA | 15262108 | 15265201 | 15262108 | ID=Msa1278740-mRNA-1;Parent=Msa1278740;Name=Msa1278740-mRNA-1;_AED=0.06;_eAED=0.06;_QI=300|1|1|1|1|1|2|429|415 |
| chr8_3 | exon | 15262108 | 15262866 | 15262108 | ID=Msa1278740-mRNA-1:exon:5885;Parent=Msa1278740-mRNA-1 |
| chr8_3 | exon | 15263984 | 15265201 | 15263984 | ID=Msa1278740-mRNA-1:exon:5886;Parent=Msa1278740-mRNA-1 |
| chr8_3 | five_prime_UTR | 15262108 | 15262407 | 15262108 | ID=Msa1278740-mRNA-1:five_prime_utr;Parent=Msa1278740-mRNA-1 |
| chr8_3 | CDS | 15262408 | 15262866 | 15262408 | ID=Msa1278740-mRNA-1:cds;Parent=Msa1278740-mRNA-1 |
| chr8_3 | CDS | 15263984 | 15264772 | 15263984 | ID=Msa1278740-mRNA-1:cds;Parent=Msa1278740-mRNA-1 |
| chr8_3 | three_prime_UTR | 15264773 | 15265201 | 15264773 | ID=Msa1278740-mRNA-1:three_prime_utr;Parent=Msa1278740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
