Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1317950 | sp|Q84JT7|ARID1_ARATH | 39.938 | 323 | 153 | 9 | 253 | 570 | 244 | 530 | 1.07e-63 | 222 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1317950 | A0A072TN61 | 91.282 | 585 | 49 | 1 | 1 | 583 | 9 | 593 | 0.0 | 1071 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1317950 | TR | ARID |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002680 | Msa1317950 | 0.820502 | 6.631146e-53 | -8.615850e-47 |
| Msa0002710 | Msa1317950 | 0.805617 | 1.224529e-49 | -8.615850e-47 |
| Msa0012940 | Msa1317950 | 0.847539 | 1.085110e-59 | -8.615850e-47 |
| Msa0017390 | Msa1317950 | 0.814916 | 1.207065e-51 | -8.615850e-47 |
| Msa0022550 | Msa1317950 | 0.804394 | 2.206328e-49 | -8.615850e-47 |
| Msa0022750 | Msa1317950 | -0.812858 | 3.430382e-51 | -8.615850e-47 |
| Msa0035130 | Msa1317950 | 0.810719 | 1.002013e-50 | -8.615850e-47 |
| Msa0036130 | Msa1317950 | 0.824089 | 9.747951e-54 | -8.615850e-47 |
| Msa0039250 | Msa1317950 | 0.827503 | 1.509637e-54 | -8.615850e-47 |
| Msa0041690 | Msa1317950 | 0.810248 | 1.266610e-50 | -8.615850e-47 |
| Msa0049790 | Msa1317950 | 0.809614 | 1.734441e-50 | -8.615850e-47 |
| Msa0051020 | Msa1317950 | 0.802121 | 6.518278e-49 | -8.615850e-47 |
| Msa0061340 | Msa1317950 | 0.801312 | 9.553970e-49 | -8.615850e-47 |
| Msa0065550 | Msa1317950 | 0.804213 | 2.406309e-49 | -8.615850e-47 |
| Msa0081210 | Msa1317950 | 0.800021 | 1.752568e-48 | -8.615850e-47 |
| Msa0089980 | Msa1317950 | 0.800131 | 1.664228e-48 | -8.615850e-47 |
| Msa0093850 | Msa1317950 | 0.826180 | 3.125555e-54 | -8.615850e-47 |
| Msa0098470 | Msa1317950 | 0.809267 | 2.059325e-50 | -8.615850e-47 |
| Msa0101270 | Msa1317950 | 0.802991 | 4.314269e-49 | -8.615850e-47 |
| Msa0106320 | Msa1317950 | 0.822556 | 2.223582e-53 | -8.615850e-47 |
| Msa0106620 | Msa1317950 | 0.852399 | 4.736442e-61 | -8.615850e-47 |
| Msa0106710 | Msa1317950 | 0.832907 | 7.229830e-56 | -8.615850e-47 |
| Msa0116790 | Msa1317950 | 0.800607 | 1.331137e-48 | -8.615850e-47 |
| Msa0610090 | Msa1317950 | 0.800056 | 1.723859e-48 | -8.615850e-47 |
| Msa0628420 | Msa1317950 | 0.817460 | 3.260691e-52 | -8.615850e-47 |
| Msa0630940 | Msa1317950 | 0.808689 | 2.737228e-50 | -8.615850e-47 |
| Msa0638480 | Msa1317950 | 0.816323 | 5.867529e-52 | -8.615850e-47 |
| Msa0644030 | Msa1317950 | 0.807697 | 4.452578e-50 | -8.615850e-47 |
| Msa0644800 | Msa1317950 | 0.824752 | 6.807461e-54 | -8.615850e-47 |
| Msa0647430 | Msa1317950 | 0.800329 | 1.516539e-48 | -8.615850e-47 |
| Msa0652690 | Msa1317950 | 0.809080 | 2.258383e-50 | -8.615850e-47 |
| Msa0658480 | Msa1317950 | 0.807931 | 3.971712e-50 | -8.615850e-47 |
| Msa0662890 | Msa1317950 | 0.802446 | 5.588924e-49 | -8.615850e-47 |
| Msa0669180 | Msa1317950 | 0.818707 | 1.703552e-52 | -8.615850e-47 |
| Msa0669520 | Msa1317950 | 0.812934 | 3.301676e-51 | -8.615850e-47 |
| Msa0679100 | Msa1317950 | 0.803620 | 3.195992e-49 | -8.615850e-47 |
| Msa0690310 | Msa1317950 | 0.811485 | 6.837890e-51 | -8.615850e-47 |
| Msa0692880 | Msa1317950 | 0.801698 | 7.965401e-49 | -8.615850e-47 |
| Msa0702590 | Msa1317950 | 0.810145 | 1.333453e-50 | -8.615850e-47 |
| Msa0710270 | Msa1317950 | 0.825268 | 5.143726e-54 | -8.615850e-47 |
| Msa0712560 | Msa1317950 | 0.803306 | 3.712709e-49 | -8.615850e-47 |
| Msa0713680 | Msa1317950 | 0.803518 | 3.355141e-49 | -8.615850e-47 |
| Msa0744100 | Msa1317950 | 0.807380 | 5.198937e-50 | -8.615850e-47 |
| Msa0750250 | Msa1317950 | 0.814008 | 1.917474e-51 | -8.615850e-47 |
| Msa0757800 | Msa1317950 | 0.816769 | 4.662757e-52 | -8.615850e-47 |
| Msa0788120 | Msa1317950 | 0.800161 | 1.640764e-48 | -8.615850e-47 |
| Msa0790400 | Msa1317950 | 0.814932 | 1.197755e-51 | -8.615850e-47 |
| Msa0809980 | Msa1317950 | 0.817444 | 3.287913e-52 | -8.615850e-47 |
| Msa0818630 | Msa1317950 | 0.812610 | 3.887801e-51 | -8.615850e-47 |
| Msa0825270 | Msa1317950 | 0.800140 | 1.657350e-48 | -8.615850e-47 |
| Msa0831100 | Msa1317950 | 0.801523 | 8.648936e-49 | -8.615850e-47 |
| Msa0836500 | Msa1317950 | 0.801838 | 7.454565e-49 | -8.615850e-47 |
| Msa0127100 | Msa1317950 | 0.819693 | 1.015562e-52 | -8.615850e-47 |
| Msa0133720 | Msa1317950 | 0.825893 | 3.656411e-54 | -8.615850e-47 |
| Msa0133820 | Msa1317950 | 0.805757 | 1.144243e-49 | -8.615850e-47 |
| Msa0138360 | Msa1317950 | 0.819851 | 9.345957e-53 | -8.615850e-47 |
| Msa0138750 | Msa1317950 | 0.822631 | 2.136581e-53 | -8.615850e-47 |
| Msa0141400 | Msa1317950 | 0.807513 | 4.872761e-50 | -8.615850e-47 |
| Msa0144360 | Msa1317950 | 0.818200 | 2.219061e-52 | -8.615850e-47 |
| Msa0147980 | Msa1317950 | 0.825043 | 5.813590e-54 | -8.615850e-47 |
| Msa0152870 | Msa1317950 | 0.820421 | 6.920576e-53 | -8.615850e-47 |
| Msa0168870 | Msa1317950 | 0.831413 | 1.693446e-55 | -8.615850e-47 |
| Msa0173890 | Msa1317950 | 0.804723 | 1.883560e-49 | -8.615850e-47 |
| Msa0181230 | Msa1317950 | 0.835194 | 1.934104e-56 | -8.615850e-47 |
| Msa0188150 | Msa1317950 | 0.810255 | 1.262621e-50 | -8.615850e-47 |
| Msa0188690 | Msa1317950 | 0.810135 | 1.340158e-50 | -8.615850e-47 |
| Msa0197780 | Msa1317950 | 0.808988 | 2.362871e-50 | -8.615850e-47 |
| Msa0199420 | Msa1317950 | 0.809330 | 1.995772e-50 | -8.615850e-47 |
| Msa0206690 | Msa1317950 | 0.800529 | 1.381001e-48 | -8.615850e-47 |
| Msa0206840 | Msa1317950 | 0.806241 | 9.049129e-50 | -8.615850e-47 |
| Msa0207350 | Msa1317950 | 0.807583 | 4.709815e-50 | -8.615850e-47 |
| Msa0237210 | Msa1317950 | 0.824790 | 6.669178e-54 | -8.615850e-47 |
| Msa1224840 | Msa1317950 | 0.809670 | 1.687390e-50 | -8.615850e-47 |
| Msa1226270 | Msa1317950 | 0.807711 | 4.422943e-50 | -8.615850e-47 |
| Msa1231820 | Msa1317950 | 0.819054 | 1.420764e-52 | -8.615850e-47 |
| Msa1234550 | Msa1317950 | 0.839895 | 1.205067e-57 | -8.615850e-47 |
| Msa1253550 | Msa1317950 | 0.849396 | 3.322298e-60 | -8.615850e-47 |
| Msa1265590 | Msa1317950 | 0.801271 | 9.743577e-49 | -8.615850e-47 |
| Msa1276660 | Msa1317950 | 0.813119 | 3.008083e-51 | -8.615850e-47 |
| Msa1277080 | Msa1317950 | 0.862181 | 6.076792e-64 | -8.615850e-47 |
| Msa1278740 | Msa1317950 | 0.942437 | 7.204301e-102 | -8.615850e-47 |
| Msa1298370 | Msa1317950 | 0.826511 | 2.606027e-54 | -8.615850e-47 |
| Msa1303240 | Msa1317950 | 0.807308 | 5.385263e-50 | -8.615850e-47 |
| Msa1303250 | Msa1317950 | 0.812218 | 4.734840e-51 | -8.615850e-47 |
| Msa1317950 | Msa1317960 | 0.993317 | 6.586296e-199 | -8.615850e-47 |
| Msa1317950 | Msa1328640 | 0.812977 | 3.230872e-51 | -8.615850e-47 |
| Msa1317950 | Msa1328710 | 0.801797 | 7.598418e-49 | -8.615850e-47 |
| Msa1317950 | Msa1329050 | -0.800559 | 1.361479e-48 | -8.615850e-47 |
| Msa1317950 | Msa1332760 | 0.809874 | 1.525020e-50 | -8.615850e-47 |
| Msa1317950 | Msa1333560 | 0.814758 | 1.308629e-51 | -8.615850e-47 |
| Msa1317950 | Msa1335160 | 0.860040 | 2.725070e-63 | -8.615850e-47 |
| Msa1317950 | Msa1338830 | 0.802702 | 4.949158e-49 | -8.615850e-47 |
| Msa1317950 | Msa1348090 | 0.823444 | 1.380342e-53 | -8.615850e-47 |
| Msa1317950 | Msa1349520 | 0.813682 | 2.261840e-51 | -8.615850e-47 |
| Msa1317950 | Msa1356610 | 0.800655 | 1.301464e-48 | -8.615850e-47 |
| Msa1317950 | Msa1359560 | 0.807510 | 4.878781e-50 | -8.615850e-47 |
| Msa1317950 | Msa1360980 | 0.821232 | 4.504032e-53 | -8.615850e-47 |
| Msa1317950 | Msa1361400 | 0.820250 | 7.576557e-53 | -8.615850e-47 |
| Msa1317950 | Msa1361410 | 0.807305 | 5.392594e-50 | -8.615850e-47 |
| Msa1317950 | Msa1369150 | 0.827744 | 1.321205e-54 | -8.615850e-47 |
| Msa1317950 | Msa1371520 | 0.805768 | 1.137988e-49 | -8.615850e-47 |
| Msa1317950 | Msa1373100 | 0.801948 | 7.074639e-49 | -8.615850e-47 |
| Msa1317950 | Msa1373820 | 0.807555 | 4.774488e-50 | -8.615850e-47 |
| Msa1317950 | Msa1376200 | 0.801386 | 9.225667e-49 | -8.615850e-47 |
| Msa1317950 | Msa1383530 | 0.842573 | 2.380872e-58 | -8.615850e-47 |
| Msa1317950 | Msa1388550 | 0.911114 | 8.769766e-83 | -8.615850e-47 |
| Msa1317950 | Msa1393820 | 0.820493 | 6.662210e-53 | -8.615850e-47 |
| Msa1317950 | Msa1411950 | 0.811534 | 6.671387e-51 | -8.615850e-47 |
| Msa1317950 | Msa1416370 | 0.813783 | 2.148647e-51 | -8.615850e-47 |
| Msa1317950 | Msa1418240 | 0.808971 | 2.382649e-50 | -8.615850e-47 |
| Msa1317950 | Msa1422950 | 0.801977 | 6.981201e-49 | -8.615850e-47 |
| Msa1317950 | Msa1440310 | 0.812493 | 4.123178e-51 | -8.615850e-47 |
| Msa1317950 | Msa1440880 | 0.823554 | 1.301154e-53 | -8.615850e-47 |
| Msa1317950 | Msa1443300 | 0.821631 | 3.642810e-53 | -8.615850e-47 |
| Msa1317950 | Msa1447180 | 0.815745 | 7.896948e-52 | -8.615850e-47 |
| Msa1317950 | Msa1450720 | 0.816204 | 6.238672e-52 | -8.615850e-47 |
| Msa1317950 | Msa1451160 | 0.809430 | 1.899996e-50 | -8.615850e-47 |
| Msa0372810 | Msa1317950 | 0.840391 | 8.945656e-58 | -8.615850e-47 |
| Msa0376280 | Msa1317950 | 0.802036 | 6.786853e-49 | -8.615850e-47 |
| Msa0378720 | Msa1317950 | 0.801708 | 7.926278e-49 | -8.615850e-47 |
| Msa0378970 | Msa1317950 | 0.825380 | 4.838285e-54 | -8.615850e-47 |
| Msa0388990 | Msa1317950 | 0.989037 | 1.963856e-176 | -8.615850e-47 |
| Msa0394690 | Msa1317950 | 0.816166 | 6.361552e-52 | -8.615850e-47 |
| Msa0419720 | Msa1317950 | 0.813051 | 3.113354e-51 | -8.615850e-47 |
| Msa0434570 | Msa1317950 | 0.809747 | 1.624234e-50 | -8.615850e-47 |
| Msa0434770 | Msa1317950 | 0.804770 | 1.841543e-49 | -8.615850e-47 |
| Msa0435370 | Msa1317950 | 0.808507 | 2.993396e-50 | -8.615850e-47 |
| Msa0435420 | Msa1317950 | 0.810952 | 8.924121e-51 | -8.615850e-47 |
| Msa0479200 | Msa1317950 | 0.809341 | 1.984924e-50 | -8.615850e-47 |
| Msa0480780 | Msa1317950 | 0.812280 | 4.590591e-51 | -8.615850e-47 |
| Msa0481970 | Msa1317950 | 0.819617 | 1.057376e-52 | -8.615850e-47 |
| Msa1009750 | Msa1317950 | 0.804979 | 1.665153e-49 | -8.615850e-47 |
| Msa1010070 | Msa1317950 | 0.806461 | 8.135906e-50 | -8.615850e-47 |
| Msa1012720 | Msa1317950 | 0.807416 | 5.109905e-50 | -8.615850e-47 |
| Msa1028280 | Msa1317950 | 0.803416 | 3.523078e-49 | -8.615850e-47 |
| Msa1034500 | Msa1317950 | 0.810703 | 1.010241e-50 | -8.615850e-47 |
| Msa1050910 | Msa1317950 | 0.819476 | 1.138411e-52 | -8.615850e-47 |
| Msa1051600 | Msa1317950 | 0.815481 | 9.042081e-52 | -8.615850e-47 |
| Msa1059960 | Msa1317950 | 0.811454 | 6.946775e-51 | -8.615850e-47 |
| Msa1068100 | Msa1317950 | 0.807596 | 4.678173e-50 | -8.615850e-47 |
| Msa1079230 | Msa1317950 | 0.839578 | 1.456897e-57 | -8.615850e-47 |
| Msa1093840 | Msa1317950 | 0.802751 | 4.834614e-49 | -8.615850e-47 |
| Msa1097820 | Msa1317950 | 0.809987 | 1.441683e-50 | -8.615850e-47 |
| Msa1102770 | Msa1317950 | 0.817827 | 2.695072e-52 | -8.615850e-47 |
| Msa1105160 | Msa1317950 | 0.802812 | 4.697227e-49 | -8.615850e-47 |
| Msa0241830 | Msa1317950 | 0.832221 | 1.069666e-55 | -8.615850e-47 |
| Msa0245650 | Msa1317950 | 0.801710 | 7.917044e-49 | -8.615850e-47 |
| Msa0249580 | Msa1317950 | 0.813042 | 3.127067e-51 | -8.615850e-47 |
| Msa0261160 | Msa1317950 | 0.805309 | 1.420436e-49 | -8.615850e-47 |
| Msa0263080 | Msa1317950 | 0.844081 | 9.428929e-59 | -8.615850e-47 |
| Msa0274980 | Msa1317950 | 0.806498 | 7.987679e-50 | -8.615850e-47 |
| Msa0279850 | Msa1317950 | 0.811117 | 8.216862e-51 | -8.615850e-47 |
| Msa0300320 | Msa1317950 | 0.819208 | 1.310548e-52 | -8.615850e-47 |
| Msa0300690 | Msa1317950 | 0.812005 | 5.269989e-51 | -8.615850e-47 |
| Msa0307850 | Msa1317950 | 0.828127 | 1.068733e-54 | -8.615850e-47 |
| Msa0311060 | Msa1317950 | 0.800266 | 1.562199e-48 | -8.615850e-47 |
| Msa0315690 | Msa1317950 | 0.821295 | 4.355457e-53 | -8.615850e-47 |
| Msa0322900 | Msa1317950 | 0.836147 | 1.109846e-56 | -8.615850e-47 |
| Msa0326590 | Msa1317950 | 0.800222 | 1.595021e-48 | -8.615850e-47 |
| Msa0328460 | Msa1317950 | 0.811940 | 5.444748e-51 | -8.615850e-47 |
| Msa0338210 | Msa1317950 | 0.808475 | 3.041672e-50 | -8.615850e-47 |
| Msa0341690 | Msa1317950 | 0.838459 | 2.840797e-57 | -8.615850e-47 |
| Msa0358400 | Msa1317950 | 0.800558 | 1.362287e-48 | -8.615850e-47 |
| Msa1121260 | Msa1317950 | 0.814677 | 1.364300e-51 | -8.615850e-47 |
| Msa1123350 | Msa1317950 | 0.805211 | 1.489297e-49 | -8.615850e-47 |
| Msa1123380 | Msa1317950 | 0.804342 | 2.261753e-49 | -8.615850e-47 |
| Msa1124110 | Msa1317950 | 0.816707 | 4.813909e-52 | -8.615850e-47 |
| Msa1127590 | Msa1317950 | 0.855221 | 7.295236e-62 | -8.615850e-47 |
| Msa1139890 | Msa1317950 | 0.803245 | 3.821614e-49 | -8.615850e-47 |
| Msa1145810 | Msa1317950 | 0.818369 | 2.031619e-52 | -8.615850e-47 |
| Msa1157870 | Msa1317950 | 0.809099 | 2.237133e-50 | -8.615850e-47 |
| Msa1168950 | Msa1317950 | 0.806896 | 6.585082e-50 | -8.615850e-47 |
| Msa1169040 | Msa1317950 | 0.815927 | 7.193565e-52 | -8.615850e-47 |
| Msa1169720 | Msa1317950 | 0.810477 | 1.130562e-50 | -8.615850e-47 |
| Msa1199570 | Msa1317950 | 0.801219 | 9.984334e-49 | -8.615850e-47 |
| Msa1204100 | Msa1317950 | -0.803051 | 4.192766e-49 | -8.615850e-47 |
| Msa1208160 | Msa1317950 | 0.815714 | 8.023997e-52 | -8.615850e-47 |
| Msa1208430 | Msa1317950 | 0.806162 | 9.405085e-50 | -8.615850e-47 |
| Msa1212950 | Msa1317950 | 0.800569 | 1.355035e-48 | -8.615850e-47 |
| Msa1214320 | Msa1317950 | 0.804543 | 2.054202e-49 | -8.615850e-47 |
| Msa1219000 | Msa1317950 | 0.822557 | 2.222959e-53 | -8.615850e-47 |
| Msa1221060 | Msa1317950 | 0.818779 | 1.639953e-52 | -8.615850e-47 |
| Msa0518030 | Msa1317950 | 0.861211 | 1.203124e-63 | -8.615850e-47 |
| Msa0527020 | Msa1317950 | 0.813102 | 3.033143e-51 | -8.615850e-47 |
| Msa0527190 | Msa1317950 | 0.810141 | 1.335964e-50 | -8.615850e-47 |
| Msa0531250 | Msa1317950 | 0.817231 | 3.670976e-52 | -8.615850e-47 |
| Msa0534400 | Msa1317950 | 0.828666 | 7.919353e-55 | -8.615850e-47 |
| Msa0535110 | Msa1317950 | 0.823934 | 1.059946e-53 | -8.615850e-47 |
| Msa0547990 | Msa1317950 | 0.813264 | 2.795125e-51 | -8.615850e-47 |
| Msa0556010 | Msa1317950 | 0.856894 | 2.362496e-62 | -8.615850e-47 |
| Msa0581690 | Msa1317950 | 0.805454 | 1.324820e-49 | -8.615850e-47 |
| Msa0584550 | Msa1317950 | 0.808296 | 3.321044e-50 | -8.615850e-47 |
| Msa0588090 | Msa1317950 | 0.804403 | 2.197252e-49 | -8.615850e-47 |
| Msa0590640 | Msa1317950 | 0.810083 | 1.375047e-50 | -8.615850e-47 |
| Msa0597770 | Msa1317950 | 0.823861 | 1.102454e-53 | -8.615850e-47 |
| Msa0861510 | Msa1317950 | 0.839303 | 1.718219e-57 | -8.615850e-47 |
| Msa0861530 | Msa1317950 | 0.827108 | 1.876944e-54 | -8.615850e-47 |
| Msa0861600 | Msa1317950 | 0.835683 | 1.454926e-56 | -8.615850e-47 |
| Msa0866520 | Msa1317950 | 0.810556 | 1.086868e-50 | -8.615850e-47 |
| Msa0868440 | Msa1317950 | 0.806413 | 8.327966e-50 | -8.615850e-47 |
| Msa0888940 | Msa1317950 | 0.805891 | 1.072473e-49 | -8.615850e-47 |
| Msa0903780 | Msa1317950 | 0.806436 | 8.232980e-50 | -8.615850e-47 |
| Msa0934140 | Msa1317950 | 0.820820 | 5.603112e-53 | -8.615850e-47 |
| Msa0944660 | Msa1317950 | 0.824358 | 8.429748e-54 | -8.615850e-47 |
| Msa0945240 | Msa1317950 | 0.810294 | 1.238164e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1317950 | MtrunA17_Chr8g0348681 | 89.720 | 321 | 33 | 0 | 1 | 321 | 9 | 329 | 0.0 | 568 |
| Msa1317950 | MtrunA17_Chr8g0348691 | 93.103 | 261 | 16 | 1 | 325 | 583 | 1 | 261 | 2.01e-174 | 494 |
| Msa1317950 | MtrunA17_Chr7g0248041 | 43.072 | 599 | 293 | 15 | 1 | 582 | 1 | 568 | 2.23e-141 | 422 |
| Msa1317950 | MtrunA17_Chr8g0387141 | 38.720 | 328 | 185 | 8 | 251 | 572 | 246 | 563 | 3.21e-61 | 213 |
| Msa1317950 | MtrunA17_Chr8g0387181 | 36.885 | 366 | 181 | 10 | 250 | 572 | 237 | 595 | 2.35e-60 | 211 |
| Msa1317950 | MtrunA17_Chr8g0387161 | 34.615 | 312 | 154 | 7 | 263 | 572 | 1 | 264 | 5.44e-49 | 172 |
| Msa1317950 | MtrunA17_Chr1g0186191 | 34.603 | 315 | 183 | 6 | 277 | 572 | 252 | 562 | 7.71e-49 | 179 |
| Msa1317950 | MtrunA17_Chr1g0186281 | 35.256 | 312 | 173 | 9 | 277 | 572 | 254 | 552 | 1.27e-48 | 178 |
| Msa1317950 | MtrunA17_Chr1g0186261 | 46.591 | 176 | 92 | 2 | 397 | 572 | 382 | 555 | 1.58e-45 | 169 |
| Msa1317950 | MtrunA17_Chr6g0479271 | 36.694 | 248 | 133 | 9 | 251 | 497 | 71 | 295 | 2.92e-31 | 124 |
| Msa1317950 | MtrunA17_Chr7g0241681 | 35.450 | 189 | 109 | 5 | 382 | 564 | 179 | 360 | 3.05e-28 | 116 |
| Msa1317950 | MtrunA17_Chr3g0086341 | 34.066 | 182 | 105 | 5 | 400 | 570 | 149 | 326 | 4.54e-22 | 100 |
| Msa1317950 | MtrunA17_Chr7g0241661 | 30.890 | 191 | 119 | 4 | 380 | 564 | 169 | 352 | 6.23e-20 | 91.7 |
| Msa1317950 | MtrunA17_Chr5g0420461 | 31.429 | 175 | 88 | 5 | 323 | 497 | 22 | 164 | 2.00e-16 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1317950 | AT2G46040.3 | 39.938 | 323 | 153 | 9 | 253 | 570 | 244 | 530 | 1.09e-64 | 222 |
| Msa1317950 | AT2G46040.1 | 39.938 | 323 | 153 | 9 | 253 | 570 | 244 | 530 | 1.09e-64 | 222 |
| Msa1317950 | AT2G46040.2 | 39.938 | 323 | 153 | 9 | 253 | 570 | 258 | 544 | 1.16e-64 | 222 |
| Msa1317950 | AT4G11400.2 | 34.694 | 343 | 184 | 8 | 263 | 581 | 225 | 551 | 8.04e-55 | 195 |
| Msa1317950 | AT4G11400.1 | 34.694 | 343 | 184 | 8 | 263 | 581 | 225 | 551 | 8.04e-55 | 195 |
| Msa1317950 | AT5G04110.1 | 38.415 | 164 | 87 | 5 | 400 | 552 | 361 | 521 | 4.56e-28 | 119 |
| Msa1317950 | AT5G04110.3 | 38.415 | 164 | 87 | 5 | 400 | 552 | 361 | 521 | 4.56e-28 | 119 |
| Msa1317950 | AT5G04110.2 | 38.415 | 164 | 87 | 5 | 400 | 552 | 362 | 522 | 4.68e-28 | 119 |
| Msa1317950 | AT5G04110.4 | 36.735 | 147 | 79 | 5 | 400 | 535 | 361 | 504 | 1.95e-20 | 95.1 |
| Msa1317950 | AT1G26580.3 | 32.124 | 193 | 110 | 6 | 396 | 570 | 65 | 254 | 6.64e-19 | 90.1 |
| Msa1317950 | AT1G26580.2 | 32.124 | 193 | 110 | 6 | 396 | 570 | 131 | 320 | 9.23e-19 | 90.1 |
| Msa1317950 | AT1G26580.1 | 32.124 | 193 | 110 | 6 | 396 | 570 | 131 | 320 | 9.23e-19 | 90.1 |
| Msa1317950 | AT2G03470.1 | 32.240 | 183 | 105 | 6 | 399 | 570 | 122 | 296 | 9.72e-18 | 86.7 |
| Msa1317950 | AT2G03470.2 | 32.240 | 183 | 105 | 6 | 399 | 570 | 121 | 295 | 1.04e-17 | 86.3 |
| Msa1317950 | AT1G13880.2 | 29.843 | 191 | 112 | 7 | 402 | 579 | 140 | 321 | 2.43e-16 | 82.0 |
| Msa1317950 | AT1G13880.1 | 29.843 | 191 | 112 | 7 | 402 | 579 | 130 | 311 | 2.69e-16 | 82.0 |
| Msa1317950 | AT1G13880.3 | 29.843 | 191 | 112 | 7 | 402 | 579 | 131 | 312 | 2.70e-16 | 82.0 |
Find 186 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCACTTAGTATCGCTTTC+AGG | 0.202455 | 8_4:+19679823 | None:intergenic |
| TCAGGCATCGGAACAATTTC+AGG | 0.206652 | 8_4:+19681384 | None:intergenic |
| AGAGAGGATATGAACATTTC+TGG | 0.214678 | 8_4:-19679522 | Msa1317950:CDS |
| GTCTGGTTTGATGGGGTTTA+AGG | 0.229952 | 8_4:-19681988 | Msa1317950:CDS |
| CTCCGACAATCTACAATCTT+AGG | 0.256515 | 8_4:-19680074 | Msa1317950:CDS |
| GAAAGGTTGGTTTGTTGTTT+TGG | 0.268550 | 8_4:-19679144 | Msa1317950:three_prime_UTR |
| GACGATCAAGTTATAGTAGA+TGG | 0.274070 | 8_4:-19679912 | Msa1317950:CDS |
| CGAGCATTGAACAGCAAAAT+TGG | 0.292781 | 8_4:-19681275 | Msa1317950:CDS |
| TATGGTATGCTTTGCGTTGC+AGG | 0.295894 | 8_4:+19679428 | None:intergenic |
| GTGAGTTGTGGGATTTGGTT+GGG | 0.298315 | 8_4:-19682127 | Msa1317950:CDS |
| TGATGGTGAGTTGTGGGATT+TGG | 0.308604 | 8_4:-19682132 | Msa1317950:CDS |
| AAATGTTCATATCCTCTCTT+TGG | 0.311222 | 8_4:+19679526 | None:intergenic |
| AAAGTTTCCCTGCTCTTGTT+AGG | 0.326065 | 8_4:+19679478 | None:intergenic |
| AAAATATGATATGCAATCTA+TGG | 0.330951 | 8_4:+19679016 | None:intergenic |
| CGTTGGTTCGACGCTGAAAC+TGG | 0.334461 | 8_4:-19682081 | Msa1317950:CDS |
| CATCCCTCGATTCATCATTC+TGG | 0.335310 | 8_4:+19681713 | None:intergenic |
| TGTGCTAGGCGAAGGAGATT+TGG | 0.343980 | 8_4:-19679980 | Msa1317950:CDS |
| CCCTTTCCATGTGGCTACTC+TGG | 0.347988 | 8_4:+19679319 | None:intergenic |
| TTAGTATCGCTTTCAGGATT+CGG | 0.348247 | 8_4:+19679829 | None:intergenic |
| AAGGTTAAGGGTGGAGTTGA+TGG | 0.350428 | 8_4:-19681810 | Msa1317950:CDS |
| GTTTGATGAGTCTGGTTTGA+TGG | 0.354024 | 8_4:-19681997 | Msa1317950:CDS |
| GGTGAGTTGTGGGATTTGGT+TGG | 0.366075 | 8_4:-19682128 | Msa1317950:CDS |
| CTGTCTACATTTATATATAG+TGG | 0.366904 | 8_4:-19679039 | Msa1317950:three_prime_UTR |
| CAGGGTGGGAATGTGGTGGC+TGG | 0.374383 | 8_4:-19681939 | Msa1317950:CDS |
| ATGAAGACGAGAAAAGGTTC+AGG | 0.374801 | 8_4:-19679570 | Msa1317950:CDS |
| AAAATCAGAATTTGAAAGGT+TGG | 0.383448 | 8_4:-19679157 | Msa1317950:three_prime_UTR |
| AGTGGTTTGGGACCCAAGTA+TGG | 0.390417 | 8_4:-19679807 | Msa1317950:CDS |
| GCTAAGGTGTTTGATGAGTC+TGG | 0.404181 | 8_4:-19682005 | Msa1317950:CDS |
| GAAAGCGATACTAAGTGGTT+TGG | 0.405886 | 8_4:-19679820 | Msa1317950:CDS |
| TTTGATGAGTCTGGTTTGAT+GGG | 0.408271 | 8_4:-19681996 | Msa1317950:CDS |
| CTTGACGAGCTTCGTGAAGA+TGG | 0.408980 | 8_4:+19680009 | None:intergenic |
| CACGGTGGGAATGTGGTAAC+TGG | 0.409472 | 8_4:-19681837 | Msa1317950:CDS |
| TCCCTAAGATTGTAGATTGT+CGG | 0.412515 | 8_4:+19680072 | None:intergenic |
| AACTGAGGATGCGTCTGATT+TGG | 0.415902 | 8_4:-19681595 | Msa1317950:CDS |
| GAATGAGTTGTTGTCGGGTC+AGG | 0.421751 | 8_4:-19681958 | Msa1317950:CDS |
| TCATGCGGCTGCGCAGTTCC+AGG | 0.424066 | 8_4:-19679718 | Msa1317950:CDS |
| TTCTCAATTTCTTGTCGAAA+GGG | 0.425727 | 8_4:-19679767 | Msa1317950:CDS |
| GTTGGGGAAGAAAGTGGCTT+AGG | 0.426601 | 8_4:-19682110 | Msa1317950:CDS |
| TTACCATTGGCGTTTCGATA+AGG | 0.427484 | 8_4:-19679623 | Msa1317950:CDS |
| TGTTTGTGATGGTGAGTTGT+GGG | 0.431433 | 8_4:-19682138 | Msa1317950:CDS |
| TCCTGTCTTCCCCTTCCTAT+AGG | 0.432461 | 8_4:+19679742 | None:intergenic |
| TCCTATAGGAAGGGGAAGAC+AGG | 0.433625 | 8_4:-19679743 | Msa1317950:CDS |
| AAAGCGATACTAAGTGGTTT+GGG | 0.433827 | 8_4:-19679819 | Msa1317950:CDS |
| TTGGTGAAGAGCGGTGAGTC+TGG | 0.434679 | 8_4:-19681576 | Msa1317950:CDS |
| TGATAATATTGTTCCGGTAG+TGG | 0.436711 | 8_4:-19681514 | Msa1317950:CDS |
| ATACAGCCAATGGCCATACT+TGG | 0.437133 | 8_4:+19679794 | None:intergenic |
| AAACATTTCCTAACAAGAGC+AGG | 0.439152 | 8_4:-19679486 | Msa1317950:CDS |
| GTGGAGGGCTTACAGTAATC+AGG | 0.440528 | 8_4:-19681352 | Msa1317950:CDS |
| GTGGATTTGTCTGGTGGTGA+TGG | 0.450675 | 8_4:-19681495 | Msa1317950:CDS |
| TGAGTTGTGGGATTTGGTTG+GGG | 0.451450 | 8_4:-19682126 | Msa1317950:CDS |
| CTCTGTTTGATATGATGAGT+TGG | 0.453588 | 8_4:-19681437 | Msa1317950:CDS |
| TTTGATGGGGTTTAAGGCTG+AGG | 0.456932 | 8_4:-19681982 | Msa1317950:CDS |
| GTGAAGATGTTCGGAATTCG+TGG | 0.464902 | 8_4:-19679597 | Msa1317950:CDS |
| GGTGGCTGGAGAGAAGGTTA+AGG | 0.466762 | 8_4:-19681925 | Msa1317950:CDS |
| TATCGGTGATAATATTGTTC+CGG | 0.468339 | 8_4:-19681520 | Msa1317950:CDS |
| GGTAACTGGAGAGAAGGTTA+AGG | 0.476059 | 8_4:-19681823 | Msa1317950:CDS |
| GAGAGGATATGAACATTTCT+GGG | 0.477135 | 8_4:-19679521 | Msa1317950:CDS |
| ATTCTCAATTTCTTGTCGAA+AGG | 0.481791 | 8_4:-19679768 | Msa1317950:CDS |
| GTGGCTGGAGAGAAGGTTAA+GGG | 0.482398 | 8_4:-19681924 | Msa1317950:CDS |
| GGACAGATGAAGACGAGAAA+AGG | 0.486764 | 8_4:-19679576 | Msa1317950:CDS |
| CTGACACATTCAACAGAACC+TGG | 0.487585 | 8_4:+19679700 | None:intergenic |
| ATTGTTGTTGACGGGAAAGG+TGG | 0.490249 | 8_4:-19682170 | Msa1317950:CDS |
| AACGCAAAGCATACCATAGC+AGG | 0.490321 | 8_4:-19679423 | Msa1317950:CDS |
| TGTTCATATCCTCTCTTTGG+AGG | 0.491805 | 8_4:+19679529 | None:intergenic |
| CTGTTTGTGATGGTGAGTTG+TGG | 0.494879 | 8_4:-19682139 | Msa1317950:CDS |
| GCATCGGCTCGCATCTGCGT+GGG | 0.496198 | 8_4:-19679889 | Msa1317950:CDS |
| TCTGTTTGATATGATGAGTT+GGG | 0.500139 | 8_4:-19681436 | Msa1317950:CDS |
| GTTCCGGTAGTGGATTTGTC+TGG | 0.501050 | 8_4:-19681504 | Msa1317950:CDS |
| GAGAATCATGATGGTGATAT+CGG | 0.501429 | 8_4:-19681537 | Msa1317950:CDS |
| TTGTCTGGTGGTGATGGAAG+TGG | 0.503537 | 8_4:-19681489 | Msa1317950:CDS |
| GAGTCGTGTGTGATGAAAGT+TGG | 0.506590 | 8_4:-19682032 | Msa1317950:CDS |
| TCCAGAGTAGCCACATGGAA+AGG | 0.509426 | 8_4:-19679320 | Msa1317950:three_prime_UTR |
| GGGTTTGATGCTGTTTGTGA+TGG | 0.509454 | 8_4:-19682149 | Msa1317950:CDS |
| TGGGACCCAAGTATGGCCAT+TGG | 0.513214 | 8_4:-19679800 | Msa1317950:CDS |
| AGCTGTTGATTGTTGTTGAC+GGG | 0.513550 | 8_4:-19682178 | Msa1317950:CDS |
| CCTCCTGTGTTGACAAATGT+TGG | 0.518613 | 8_4:+19679285 | None:intergenic |
| ATAAGGTCGGTGAAGATGTT+CGG | 0.518788 | 8_4:-19679606 | Msa1317950:CDS |
| GAATCGAGAAATCCTACATC+GGG | 0.518984 | 8_4:+19681735 | None:intergenic |
| CAAGTCGTCGTGCTGTGAAA+CGG | 0.521739 | 8_4:-19679948 | Msa1317950:CDS |
| GTAACTGGAGAGAAGGTTAA+GGG | 0.523633 | 8_4:-19681822 | Msa1317950:CDS |
| GCTAAAGCTAAGCTGGAGTT+AGG | 0.528280 | 8_4:-19679655 | Msa1317950:CDS |
| GAATGTGGTGGCTGGAGAGA+AGG | 0.530094 | 8_4:-19681931 | Msa1317950:CDS |
| TCCGACAATCTACAATCTTA+GGG | 0.531884 | 8_4:-19680073 | Msa1317950:CDS |
| TGAGGTGAATGAGTTGTTGT+CGG | 0.533812 | 8_4:-19681964 | Msa1317950:CDS |
| AAGGTTAAGGGTGGAGCTGA+TGG | 0.534301 | 8_4:-19681912 | Msa1317950:CDS |
| GAAGTGGTTCTAGTCTTAAG+AGG | 0.534929 | 8_4:-19681473 | Msa1317950:CDS |
| CATTGAACAGCAAAATTGGC+AGG | 0.537300 | 8_4:-19681271 | Msa1317950:intron |
| AATGAGTTGTTGTCGGGTCA+GGG | 0.537370 | 8_4:-19681957 | Msa1317950:CDS |
| CCAGAGTAGCCACATGGAAA+GGG | 0.539118 | 8_4:-19679319 | Msa1317950:three_prime_UTR |
| CTGAGTGAGGGTAATGGTGA+TGG | 0.540918 | 8_4:-19681666 | Msa1317950:CDS |
| CTTACAGTAATCAGGAGGCT+TGG | 0.542653 | 8_4:-19681344 | Msa1317950:CDS |
| TAATCAGGAGGCTTGGAAGC+GGG | 0.543149 | 8_4:-19681337 | Msa1317950:CDS |
| TGAGGGTAATGGTGATGGAA+TGG | 0.545924 | 8_4:-19681661 | Msa1317950:CDS |
| GTGCGAATTTCGAGTCTAGT+GGG | 0.546249 | 8_4:-19681872 | Msa1317950:CDS |
| GTGAAAGAAGTTCCCGATGT+AGG | 0.550596 | 8_4:-19681747 | Msa1317950:CDS |
| AGTTCATCTGTGCTAGGCGA+AGG | 0.552705 | 8_4:-19679988 | Msa1317950:CDS |
| GTCGGGTCAGGGTGGGAATG+TGG | 0.553223 | 8_4:-19681946 | Msa1317950:CDS |
| TTACTGTAAGCCCTCCACTT+TGG | 0.553928 | 8_4:+19681357 | None:intergenic |
| CTTGTCGAAAGGGATCCTAT+AGG | 0.556633 | 8_4:-19679757 | Msa1317950:CDS |
| ACGATCAAGTTATAGTAGAT+GGG | 0.556760 | 8_4:-19679911 | Msa1317950:CDS |
| GCGGGTTCTGTTGTTTCGAG+AGG | 0.558329 | 8_4:-19681319 | Msa1317950:CDS |
| TGAAGACGAGAAAAGGTTCA+GGG | 0.560005 | 8_4:-19679569 | Msa1317950:CDS |
| GATTTGGTTGGGGAAGAAAG+TGG | 0.560558 | 8_4:-19682116 | Msa1317950:CDS |
| TTGATTGTTGTTGACGGGAA+AGG | 0.563358 | 8_4:-19682173 | Msa1317950:CDS |
| GATGGAGGGAAAATAACTGT+AGG | 0.564686 | 8_4:-19681621 | Msa1317950:CDS |
| GGATTCGGAGCAGTCCACTC+TGG | 0.565588 | 8_4:+19679844 | None:intergenic |
| ATGGTCAGTGATACCGATGT+TGG | 0.565824 | 8_4:-19681693 | Msa1317950:CDS |
| AAGCTGTTGATTGTTGTTGA+CGG | 0.566769 | 8_4:-19682179 | Msa1317950:CDS |
| GAGGTGAATGAGTTGTTGTC+GGG | 0.568676 | 8_4:-19681963 | Msa1317950:CDS |
| TCGTCAAGTTCATCTGTGCT+AGG | 0.569671 | 8_4:-19679994 | Msa1317950:CDS |
| CAATCTACAATCTTAGGGAG+AGG | 0.570505 | 8_4:-19680068 | Msa1317950:CDS |
| GCCTGAAAAGCCAAAGTGGA+GGG | 0.574127 | 8_4:-19681367 | Msa1317950:CDS |
| AGAAATTCACGGTGGGAATG+TGG | 0.576328 | 8_4:-19681844 | Msa1317950:CDS |
| TACAGCCAATGGCCATACTT+GGG | 0.577673 | 8_4:+19679795 | None:intergenic |
| GTGGGATCATCATACATGCT+AGG | 0.577985 | 8_4:+19680096 | None:intergenic |
| TTGTTGTTGACGGGAAAGGT+GGG | 0.578023 | 8_4:-19682169 | Msa1317950:CDS |
| CATCGGCTCGCATCTGCGTG+GGG | 0.579313 | 8_4:-19679888 | Msa1317950:CDS |
| ACTGGAGAGAAGGTTAAGGG+TGG | 0.579796 | 8_4:-19681819 | Msa1317950:CDS |
| ATCTACAATCTTAGGGAGAG+GGG | 0.580993 | 8_4:-19680066 | Msa1317950:CDS |
| AATCTACAATCTTAGGGAGA+GGG | 0.581096 | 8_4:-19680067 | Msa1317950:CDS |
| GGAAAGCTGAGTGAGGGTAA+TGG | 0.581453 | 8_4:-19681672 | Msa1317950:CDS |
| AAGTTATAGTAGATGGGCAT+CGG | 0.582631 | 8_4:-19679905 | Msa1317950:CDS |
| TACCATAGCAGGCATACACT+TGG | 0.584083 | 8_4:-19679412 | Msa1317950:CDS |
| AACATTTCCTAACAAGAGCA+GGG | 0.584542 | 8_4:-19679485 | Msa1317950:CDS |
| CGACCTTATCGAAACGCCAA+TGG | 0.585564 | 8_4:+19679620 | None:intergenic |
| CTCACTCAGCTTTCCAACAT+CGG | 0.585605 | 8_4:+19681680 | None:intergenic |
| ATGGAGGGAAAATAACTGTA+GGG | 0.586968 | 8_4:-19681620 | Msa1317950:CDS |
| GTTCATATCCTCTCTTTGGA+GGG | 0.587128 | 8_4:+19679530 | None:intergenic |
| TCGAAAGGGATCCTATAGGA+AGG | 0.587509 | 8_4:-19679753 | Msa1317950:CDS |
| CGATGCCTGAAAAGCCAAAG+TGG | 0.588222 | 8_4:-19681371 | Msa1317950:CDS |
| TTGATGAGTCTGGTTTGATG+GGG | 0.588528 | 8_4:-19681995 | Msa1317950:CDS |
| GGGTCAGGGTGGGAATGTGG+TGG | 0.588589 | 8_4:-19681943 | Msa1317950:CDS |
| GAATGTGGTAACTGGAGAGA+AGG | 0.588966 | 8_4:-19681829 | Msa1317950:CDS |
| TTTCACAGCACGACGACTTG+TGG | 0.590229 | 8_4:+19679951 | None:intergenic |
| GAAAGGGATCCTATAGGAAG+GGG | 0.590844 | 8_4:-19679751 | Msa1317950:CDS |
| ATCCTGAAAGCGATACTAAG+TGG | 0.591141 | 8_4:-19679825 | Msa1317950:CDS |
| CCACCAGACAAATCCACTAC+CGG | 0.592047 | 8_4:+19681501 | None:intergenic |
| CGAAAGGGATCCTATAGGAA+GGG | 0.595912 | 8_4:-19679752 | Msa1317950:CDS |
| AGTTGTTGTCGGGTCAGGGT+GGG | 0.598266 | 8_4:-19681953 | Msa1317950:CDS |
| TCATCACTTGGTGACTACAA+AGG | 0.599966 | 8_4:-19678986 | Msa1317950:three_prime_UTR |
| GGCATCGGCTCGCATCTGCG+TGG | 0.600636 | 8_4:-19679890 | Msa1317950:CDS |
| GTAATCAGGAGGCTTGGAAG+CGG | 0.600886 | 8_4:-19681338 | Msa1317950:CDS |
| GAGTCTGGATTGCTGAATGT+TGG | 0.602152 | 8_4:-19681561 | Msa1317950:CDS |
| AGATTGTAGATTGTCGGAGT+GGG | 0.602178 | 8_4:+19680078 | None:intergenic |
| CACCAAGTGTATGCCTGCTA+TGG | 0.604240 | 8_4:+19679410 | None:intergenic |
| TAGTCTTAAGAGGAAGAGAG+AGG | 0.607309 | 8_4:-19681463 | Msa1317950:CDS |
| CATTGGCGTTTCGATAAGGT+CGG | 0.607511 | 8_4:-19679619 | Msa1317950:CDS |
| AGTGGGGAGAAAGAAATTCA+CGG | 0.609700 | 8_4:-19681855 | Msa1317950:CDS |
| CGATGTTGGAAAGCTGAGTG+AGG | 0.609819 | 8_4:-19681679 | Msa1317950:CDS |
| TAGGCGAAGGAGATTTGGAC+GGG | 0.612279 | 8_4:-19679975 | Msa1317950:CDS |
| AGTGCGAATTTCGAGTCTAG+TGG | 0.613148 | 8_4:-19681873 | Msa1317950:CDS |
| AGCTAAGCTGGAGTTAGGCG+TGG | 0.617435 | 8_4:-19679650 | Msa1317950:CDS |
| ATTCCAGAATGATGAATCGA+GGG | 0.617833 | 8_4:-19681716 | Msa1317950:CDS |
| GATGAAAGTTGGTGATGCTA+AGG | 0.617892 | 8_4:-19682021 | Msa1317950:CDS |
| TGCCTGAAAAGCCAAAGTGG+AGG | 0.624771 | 8_4:-19681368 | Msa1317950:CDS |
| CAGCTTTACCCTCCAAAGAG+AGG | 0.627360 | 8_4:-19679538 | Msa1317950:CDS |
| CCGGTAGTGGATTTGTCTGG+TGG | 0.629270 | 8_4:-19681501 | Msa1317950:CDS |
| GGAACAATTTCAGGATCACA+AGG | 0.631056 | 8_4:+19681393 | None:intergenic |
| CAGAATGATGAATCGAGGGA+TGG | 0.631748 | 8_4:-19681712 | Msa1317950:CDS |
| GGAATCGAGAAATCCTACAT+CGG | 0.631911 | 8_4:+19681734 | None:intergenic |
| TCTACAATCTTAGGGAGAGG+GGG | 0.633262 | 8_4:-19680065 | Msa1317950:CDS |
| ATCAAGCTGAAGTGCCAGAG+TGG | 0.634304 | 8_4:-19679858 | Msa1317950:CDS |
| TCTTAAGAGGAAGAGAGAGG+AGG | 0.635943 | 8_4:-19681460 | Msa1317950:CDS |
| CCAACATTTGTCAACACAGG+AGG | 0.637631 | 8_4:-19679285 | Msa1317950:three_prime_UTR |
| AATCCAACATTTGTCAACAC+AGG | 0.638035 | 8_4:-19679288 | Msa1317950:three_prime_UTR |
| CTAGGCGAAGGAGATTTGGA+CGG | 0.640028 | 8_4:-19679976 | Msa1317950:CDS |
| AAGATTGTAGATTGTCGGAG+TGG | 0.640461 | 8_4:+19680077 | None:intergenic |
| GATTCCAGAATGATGAATCG+AGG | 0.640790 | 8_4:-19681717 | Msa1317950:CDS |
| GAGTTGTTGTCGGGTCAGGG+TGG | 0.642746 | 8_4:-19681954 | Msa1317950:CDS |
| TGAGAATTCGATACAGCCAA+TGG | 0.643809 | 8_4:+19679784 | None:intergenic |
| GGGAGAAAGAAATTCACGGT+GGG | 0.651200 | 8_4:-19681851 | Msa1317950:CDS |
| GATGTTGGAAAGCTGAGTGA+GGG | 0.661886 | 8_4:-19681678 | Msa1317950:CDS |
| TAGATTCCAGAGTAGCCACA+TGG | 0.665441 | 8_4:-19679325 | Msa1317950:three_prime_UTR |
| AGTGGCTTAGGTGTTAACGT+TGG | 0.665777 | 8_4:-19682098 | Msa1317950:CDS |
| TGCGAATTTCGAGTCTAGTG+GGG | 0.671840 | 8_4:-19681871 | Msa1317950:CDS |
| AGGGGAAGACAGGATTCATG+CGG | 0.683109 | 8_4:-19679733 | Msa1317950:CDS |
| AATGTTGGCGAGAATCATGA+TGG | 0.684957 | 8_4:-19681546 | Msa1317950:CDS |
| TGGAGCTGATGGTGCTAACG+AGG | 0.694652 | 8_4:-19681901 | Msa1317950:CDS |
| GCTGGAGAGAAGGTTAAGGG+TGG | 0.695646 | 8_4:-19681921 | Msa1317950:CDS |
| TGGAGTTGATGGTGCTAACG+AGG | 0.697135 | 8_4:-19681799 | Msa1317950:CDS |
| GCGTCTGATTTGGTGAAGAG+CGG | 0.702691 | 8_4:-19681585 | Msa1317950:CDS |
| GAGGGCTTACAGTAATCAGG+AGG | 0.703144 | 8_4:-19681349 | Msa1317950:CDS |
| AGGATCACAAGGGTTACTCG+CGG | 0.705433 | 8_4:+19681404 | None:intergenic |
| GAACAATTTCAGGATCACAA+GGG | 0.713883 | 8_4:+19681394 | None:intergenic |
| AATAACTGTAGGGACAACTG+AGG | 0.724458 | 8_4:-19681610 | Msa1317950:CDS |
| GGGGAGAAAGAAATTCACGG+TGG | 0.772176 | 8_4:-19681852 | Msa1317950:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTAAAGCAATTTAAGTT+TGG | + | chr8_4:19679918-19679937 | None:intergenic | 15.0% |
| !!! | ATATACATCATAGATTTTAA+AGG | - | chr8_4:19681944-19681963 | Msa1317950:CDS | 15.0% |
| !!! | TATACATCATAGATTTTAAA+GGG | - | chr8_4:19681945-19681964 | Msa1317950:CDS | 15.0% |
| !! | TTTCATGTGTAAATGATAAT+TGG | - | chr8_4:19680116-19680135 | Msa1317950:intron | 20.0% |
| !!! | TCTTATTTTGAGCAAATAAT+TGG | - | chr8_4:19680148-19680167 | Msa1317950:intron | 20.0% |
| !! | ATGACTTATTAAATTTCATG+TGG | - | chr8_4:19680295-19680314 | Msa1317950:intron | 20.0% |
| !! | TGACTTATTAAATTTCATGT+GGG | - | chr8_4:19680296-19680315 | Msa1317950:intron | 20.0% |
| !! | ACAAAATTAAATCATGATGA+AGG | + | chr8_4:19680422-19680441 | None:intergenic | 20.0% |
| !!! | TGTTTTTAGTTAGTTAATGT+TGG | - | chr8_4:19680625-19680644 | Msa1317950:intron | 20.0% |
| !!! | GTTTTTAGTTAGTTAATGTT+GGG | - | chr8_4:19680626-19680645 | Msa1317950:intron | 20.0% |
| !!! | TGTTGTTGTTATATTAAAAG+TGG | - | chr8_4:19680710-19680729 | Msa1317950:intron | 20.0% |
| !!! | AACCATGCTTTAAATAAAAA+GGG | + | chr8_4:19680763-19680782 | None:intergenic | 20.0% |
| !!! | TAACCATGCTTTAAATAAAA+AGG | + | chr8_4:19680764-19680783 | None:intergenic | 20.0% |
| !!! | CGTATTTTTTAGAGTAATAA+AGG | - | chr8_4:19680889-19680908 | Msa1317950:intron | 20.0% |
| !! | GTTAAAAATCAGAATTTGAA+AGG | - | chr8_4:19681967-19681986 | Msa1317950:CDS | 20.0% |
| !! | AAAATATGATATGCAATCTA+TGG | + | chr8_4:19682115-19682134 | None:intergenic | 20.0% |
| !!! | ATTTTCATTTTTTCATCACT+TGG | - | chr8_4:19682130-19682149 | Msa1317950:CDS | 20.0% |
| ! | TGCTTGAAATTTAGTAAACT+TGG | - | chr8_4:19679958-19679977 | Msa1317950:CDS | 25.0% |
| ! | GCTTGAAATTTAGTAAACTT+GGG | - | chr8_4:19679959-19679978 | Msa1317950:CDS | 25.0% |
| ! | AACAGTTGACATTAAAACTT+GGG | + | chr8_4:19680219-19680238 | None:intergenic | 25.0% |
| ! | TAACAGTTGACATTAAAACT+TGG | + | chr8_4:19680220-19680239 | None:intergenic | 25.0% |
| ! | GAAATTTAATAAGTCATCAG+TGG | + | chr8_4:19680292-19680311 | None:intergenic | 25.0% |
| !!! | AATATCTCAGCGTTTTTTTT+CGG | + | chr8_4:19680546-19680565 | None:intergenic | 25.0% |
| !! | GAGATATTGTCATAGTATTT+TGG | - | chr8_4:19680558-19680577 | Msa1317950:intron | 25.0% |
| ! | ATTCAGTTTCCTTACTATTA+AGG | - | chr8_4:19680679-19680698 | Msa1317950:intron | 25.0% |
| ! | AATAACACACCTTAATAGTA+AGG | + | chr8_4:19680691-19680710 | None:intergenic | 25.0% |
| ! | TTGTTATATTAAAAGTGGCA+AGG | - | chr8_4:19680715-19680734 | Msa1317950:intron | 25.0% |
| ! | ATGGTTAACTTATGCATTTA+TGG | - | chr8_4:19680777-19680796 | Msa1317950:intron | 25.0% |
| ! | TGGTTAACTTATGCATTTAT+GGG | - | chr8_4:19680778-19680797 | Msa1317950:intron | 25.0% |
| ! | AAGTATCTAAATTGAATTGC+AGG | - | chr8_4:19680851-19680870 | Msa1317950:intron | 25.0% |
| ! | AGTAATAAAGGTTTATTAGC+TGG | - | chr8_4:19680901-19680920 | Msa1317950:intron | 25.0% |
| ! | GTTAATGCAAAAGGAAATTT+AGG | + | chr8_4:19680972-19680991 | None:intergenic | 25.0% |
| !! | TGCAAAATTATACAAGGTTT+TGG | + | chr8_4:19680996-19681015 | None:intergenic | 25.0% |
| ! | AAAATCAGAATTTGAAAGGT+TGG | - | chr8_4:19681971-19681990 | Msa1317950:CDS | 25.0% |
| ! | CTGTCTACATTTATATATAG+TGG | - | chr8_4:19682089-19682108 | Msa1317950:CDS | 25.0% |
| !!! | AGAAGCTTTTTAGAAATACA+GGG | - | chr8_4:19682176-19682195 | Msa1317950:CDS | 25.0% |
| ! | GAAGTAGTTGAAGATTTTGA+TGG | - | chr8_4:19679489-19679508 | Msa1317950:CDS | 30.0% |
| !! | TAGTTGAAGATTTTGATGGA+GGG | - | chr8_4:19679493-19679512 | Msa1317950:CDS | 30.0% |
| TATCGGTGATAATATTGTTC+CGG | - | chr8_4:19679608-19679627 | Msa1317950:CDS | 30.0% | |
| TCTGTTTGATATGATGAGTT+GGG | - | chr8_4:19679692-19679711 | Msa1317950:CDS | 30.0% | |
| ! | CAATTTAAGTTTGGCTAACT+CGG | + | chr8_4:19679909-19679928 | None:intergenic | 30.0% |
| ! | TGTAATTGTTCTGTTTCTCA+AGG | - | chr8_4:19680084-19680103 | Msa1317950:CDS | 30.0% |
| !! | TACAGTTTCATTTAGTTTGC+TGG | - | chr8_4:19680238-19680257 | Msa1317950:intron | 30.0% |
| !! | ACAGTTTCATTTAGTTTGCT+GGG | - | chr8_4:19680239-19680258 | Msa1317950:intron | 30.0% |
| ATGCTAATGTGATGTGTATT+TGG | - | chr8_4:19680474-19680493 | Msa1317950:intron | 30.0% | |
| TGCTAATGTGATGTGTATTT+GGG | - | chr8_4:19680475-19680494 | Msa1317950:intron | 30.0% | |
| TAAATAAAAAGGGCCCATAA+TGG | + | chr8_4:19680753-19680772 | None:intergenic | 30.0% | |
| AATGTATGCTATCCCAAAAA+GGG | + | chr8_4:19680804-19680823 | None:intergenic | 30.0% | |
| TGACTCTGCAAAATTATACA+AGG | + | chr8_4:19681002-19681021 | None:intergenic | 30.0% | |
| ACGATCAAGTTATAGTAGAT+GGG | - | chr8_4:19681217-19681236 | Msa1317950:intron | 30.0% | |
| ATTCTCAATTTCTTGTCGAA+AGG | - | chr8_4:19681360-19681379 | Msa1317950:CDS | 30.0% | |
| TTCTCAATTTCTTGTCGAAA+GGG | - | chr8_4:19681361-19681380 | Msa1317950:CDS | 30.0% | |
| !!! | TAGCTTTTTTCTCAGAAATG+TGG | + | chr8_4:19681457-19681476 | None:intergenic | 30.0% |
| AAATGTTCATATCCTCTCTT+TGG | + | chr8_4:19681605-19681624 | None:intergenic | 30.0% | |
| !! | TCTGATTTGAAGAAGCTTTT+TGG | - | chr8_4:19681770-19681789 | Msa1317950:CDS | 30.0% |
| ! | TTCTAAAAAGCTTCTGTTTC+AGG | + | chr8_4:19682171-19682190 | None:intergenic | 30.0% |
| !! | CAGAAGCTTTTTAGAAATAC+AGG | - | chr8_4:19682175-19682194 | Msa1317950:CDS | 30.0% |
| ! | ACAGGGAAATTTTATTGTAG+AGG | - | chr8_4:19682193-19682212 | Msa1317950:CDS | 30.0% |
| ! | CAGGGAAATTTTATTGTAGA+GGG | - | chr8_4:19682194-19682213 | Msa1317950:CDS | 30.0% |
| ! | AAGCTGTTGATTGTTGTTGA+CGG | - | chr8_4:19678949-19678968 | Msa1317950:three_prime_UTR | 35.0% |
| ! | TTTGATGAGTCTGGTTTGAT+GGG | - | chr8_4:19679132-19679151 | Msa1317950:three_prime_UTR | 35.0% |
| !! | AAGAGTGTGAATTTTGAGTC+TGG | - | chr8_4:19679354-19679373 | Msa1317950:CDS | 35.0% |
| ATTCCAGAATGATGAATCGA+GGG | - | chr8_4:19679412-19679431 | Msa1317950:CDS | 35.0% | |
| !! | GTAGTTGAAGATTTTGATGG+AGG | - | chr8_4:19679492-19679511 | Msa1317950:CDS | 35.0% |
| ATGGAGGGAAAATAACTGTA+GGG | - | chr8_4:19679508-19679527 | Msa1317950:CDS | 35.0% | |
| ! | GAGAATCATGATGGTGATAT+CGG | - | chr8_4:19679591-19679610 | Msa1317950:CDS | 35.0% |
| TGATAATATTGTTCCGGTAG+TGG | - | chr8_4:19679614-19679633 | Msa1317950:CDS | 35.0% | |
| CTCTGTTTGATATGATGAGT+TGG | - | chr8_4:19679691-19679710 | Msa1317950:CDS | 35.0% | |
| GAACAATTTCAGGATCACAA+GGG | + | chr8_4:19679737-19679756 | None:intergenic | 35.0% | |
| ! | GCATTTGTTAGTTGTTACTG+TGG | - | chr8_4:19680173-19680192 | Msa1317950:intron | 35.0% |
| !! | CAGTTTCATTTAGTTTGCTG+GGG | - | chr8_4:19680240-19680259 | Msa1317950:intron | 35.0% |
| !! | AGTTTCATTTAGTTTGCTGG+GGG | - | chr8_4:19680241-19680260 | Msa1317950:intron | 35.0% |
| ! | CACTTGTCAGTTTTTCATGT+GGG | - | chr8_4:19680321-19680340 | Msa1317950:intron | 35.0% |
| ! | ACTTGTCAGTTTTTCATGTG+GGG | - | chr8_4:19680322-19680341 | Msa1317950:intron | 35.0% |
| TAATGTGATGTGTATTTGGG+TGG | - | chr8_4:19680478-19680497 | Msa1317950:intron | 35.0% | |
| AATGTGATGTGTATTTGGGT+GGG | - | chr8_4:19680479-19680498 | Msa1317950:intron | 35.0% | |
| GCAAACATTCTCACCATTAT+GGG | - | chr8_4:19680737-19680756 | Msa1317950:intron | 35.0% | |
| !! | GGCCCTTTTTATTTAAAGCA+TGG | - | chr8_4:19680758-19680777 | Msa1317950:intron | 35.0% |
| CAATGTATGCTATCCCAAAA+AGG | + | chr8_4:19680805-19680824 | None:intergenic | 35.0% | |
| !!! | GGTTTTGGTGTTAATGCAAA+AGG | + | chr8_4:19680981-19681000 | None:intergenic | 35.0% |
| TCCGACAATCTACAATCTTA+GGG | - | chr8_4:19681055-19681074 | Msa1317950:intron | 35.0% | |
| TCCCTAAGATTGTAGATTGT+CGG | + | chr8_4:19681059-19681078 | None:intergenic | 35.0% | |
| AATCTACAATCTTAGGGAGA+GGG | - | chr8_4:19681061-19681080 | Msa1317950:intron | 35.0% | |
| GACGATCAAGTTATAGTAGA+TGG | - | chr8_4:19681216-19681235 | Msa1317950:intron | 35.0% | |
| AAGTTATAGTAGATGGGCAT+CGG | - | chr8_4:19681223-19681242 | Msa1317950:intron | 35.0% | |
| TTAGTATCGCTTTCAGGATT+CGG | + | chr8_4:19681302-19681321 | None:intergenic | 35.0% | |
| AAAGCGATACTAAGTGGTTT+GGG | - | chr8_4:19681309-19681328 | Msa1317950:CDS | 35.0% | |
| GAAAAAAGCTAAAGCTAAGC+TGG | - | chr8_4:19681466-19681485 | Msa1317950:CDS | 35.0% | |
| AGAGAGGATATGAACATTTC+TGG | - | chr8_4:19681606-19681625 | Msa1317950:CDS | 35.0% | |
| GAGAGGATATGAACATTTCT+GGG | - | chr8_4:19681607-19681626 | Msa1317950:CDS | 35.0% | |
| AAACATTTCCTAACAAGAGC+AGG | - | chr8_4:19681642-19681661 | Msa1317950:CDS | 35.0% | |
| AACATTTCCTAACAAGAGCA+GGG | - | chr8_4:19681643-19681662 | Msa1317950:CDS | 35.0% | |
| AATCCAACATTTGTCAACAC+AGG | - | chr8_4:19681840-19681859 | Msa1317950:CDS | 35.0% | |
| !!! | GAAAGGTTGGTTTGTTGTTT+TGG | - | chr8_4:19681984-19682003 | Msa1317950:CDS | 35.0% |
| !!! | TTTGTTGTTTTGGTCATGTC+TGG | - | chr8_4:19681994-19682013 | Msa1317950:CDS | 35.0% |
| ! | CTAGTATGCTTCAGATTTTG+AGG | - | chr8_4:19682054-19682073 | Msa1317950:CDS | 35.0% |
| ! | AGCTGTTGATTGTTGTTGAC+GGG | - | chr8_4:19678950-19678969 | Msa1317950:three_prime_UTR | 40.0% |
| ! | TTGATTGTTGTTGACGGGAA+AGG | - | chr8_4:19678955-19678974 | Msa1317950:three_prime_UTR | 40.0% |
| ! | TGTTTGTGATGGTGAGTTGT+GGG | - | chr8_4:19678990-19679009 | Msa1317950:three_prime_UTR | 40.0% |
| !! | GATGAAAGTTGGTGATGCTA+AGG | - | chr8_4:19679107-19679126 | Msa1317950:three_prime_UTR | 40.0% |
| ! | GTTTGATGAGTCTGGTTTGA+TGG | - | chr8_4:19679131-19679150 | Msa1317950:three_prime_UTR | 40.0% |
| ! | TTGATGAGTCTGGTTTGATG+GGG | - | chr8_4:19679133-19679152 | Msa1317950:three_prime_UTR | 40.0% |
| TGAGGTGAATGAGTTGTTGT+CGG | - | chr8_4:19679164-19679183 | Msa1317950:three_prime_UTR | 40.0% | |
| AGTGGGGAGAAAGAAATTCA+CGG | - | chr8_4:19679273-19679292 | Msa1317950:three_prime_UTR | 40.0% | |
| GTAACTGGAGAGAAGGTTAA+GGG | - | chr8_4:19679306-19679325 | Msa1317950:three_prime_UTR | 40.0% | |
| !! | AGTGTGAATTTTGAGTCTGG+TGG | - | chr8_4:19679357-19679376 | Msa1317950:CDS | 40.0% |
| !! | GTGTGAATTTTGAGTCTGGT+GGG | - | chr8_4:19679358-19679377 | Msa1317950:CDS | 40.0% |
| !! | TGTGAATTTTGAGTCTGGTG+GGG | - | chr8_4:19679359-19679378 | Msa1317950:CDS | 40.0% |
| GAATCGAGAAATCCTACATC+GGG | + | chr8_4:19679396-19679415 | None:intergenic | 40.0% | |
| GGAATCGAGAAATCCTACAT+CGG | + | chr8_4:19679397-19679416 | None:intergenic | 40.0% | |
| GATTCCAGAATGATGAATCG+AGG | - | chr8_4:19679411-19679430 | Msa1317950:CDS | 40.0% | |
| GATGGAGGGAAAATAACTGT+AGG | - | chr8_4:19679507-19679526 | Msa1317950:CDS | 40.0% | |
| AATAACTGTAGGGACAACTG+AGG | - | chr8_4:19679518-19679537 | Msa1317950:CDS | 40.0% | |
| AATGTTGGCGAGAATCATGA+TGG | - | chr8_4:19679582-19679601 | Msa1317950:CDS | 40.0% | |
| !! | GAAGTGGTTCTAGTCTTAAG+AGG | - | chr8_4:19679655-19679674 | Msa1317950:CDS | 40.0% |
| ! | TAGTCTTAAGAGGAAGAGAG+AGG | - | chr8_4:19679665-19679684 | Msa1317950:CDS | 40.0% |
| GGAACAATTTCAGGATCACA+AGG | + | chr8_4:19679738-19679757 | None:intergenic | 40.0% | |
| !! | CGAGCATTGAACAGCAAAAT+TGG | - | chr8_4:19679853-19679872 | Msa1317950:CDS | 40.0% |
| CATTGAACAGCAAAATTGGC+AGG | - | chr8_4:19679857-19679876 | Msa1317950:CDS | 40.0% | |
| CCACATGAAAAACTGACAAG+TGG | + | chr8_4:19680323-19680342 | None:intergenic | 40.0% | |
| ! | CCACTTGTCAGTTTTTCATG+TGG | - | chr8_4:19680320-19680339 | Msa1317950:intron | 40.0% |
| ATGTGATGTGTATTTGGGTG+GGG | - | chr8_4:19680480-19680499 | Msa1317950:intron | 40.0% | |
| ATTTGGGTGGGGAAAATTGT+TGG | - | chr8_4:19680491-19680510 | Msa1317950:intron | 40.0% | |
| GGCAAACATTCTCACCATTA+TGG | - | chr8_4:19680736-19680755 | Msa1317950:intron | 40.0% | |
| ! | ATGCATTTATGGGCCCTTTT+TGG | - | chr8_4:19680788-19680807 | Msa1317950:intron | 40.0% |
| ! | TGCATTTATGGGCCCTTTTT+GGG | - | chr8_4:19680789-19680808 | Msa1317950:intron | 40.0% |
| !! | GATAGCATACATTGACTTGC+AGG | - | chr8_4:19680811-19680830 | Msa1317950:intron | 40.0% |
| AGATTGTAGATTGTCGGAGT+GGG | + | chr8_4:19681053-19681072 | None:intergenic | 40.0% | |
| AAGATTGTAGATTGTCGGAG+TGG | + | chr8_4:19681054-19681073 | None:intergenic | 40.0% | |
| CTCCGACAATCTACAATCTT+AGG | - | chr8_4:19681054-19681073 | Msa1317950:intron | 40.0% | |
| CAATCTACAATCTTAGGGAG+AGG | - | chr8_4:19681060-19681079 | Msa1317950:intron | 40.0% | |
| ATCTACAATCTTAGGGAGAG+GGG | - | chr8_4:19681062-19681081 | Msa1317950:intron | 40.0% | |
| ATCCTGAAAGCGATACTAAG+TGG | - | chr8_4:19681303-19681322 | Msa1317950:CDS | 40.0% | |
| AACCACTTAGTATCGCTTTC+AGG | + | chr8_4:19681308-19681327 | None:intergenic | 40.0% | |
| GAAAGCGATACTAAGTGGTT+TGG | - | chr8_4:19681308-19681327 | Msa1317950:CDS | 40.0% | |
| TGAGAATTCGATACAGCCAA+TGG | + | chr8_4:19681347-19681366 | None:intergenic | 40.0% | |
| TTACCATTGGCGTTTCGATA+AGG | - | chr8_4:19681505-19681524 | Msa1317950:CDS | 40.0% | |
| ATAAGGTCGGTGAAGATGTT+CGG | - | chr8_4:19681522-19681541 | Msa1317950:CDS | 40.0% | |
| ATGAAGACGAGAAAAGGTTC+AGG | - | chr8_4:19681558-19681577 | Msa1317950:CDS | 40.0% | |
| TGAAGACGAGAAAAGGTTCA+GGG | - | chr8_4:19681559-19681578 | Msa1317950:CDS | 40.0% | |
| GTTCATATCCTCTCTTTGGA+GGG | + | chr8_4:19681601-19681620 | None:intergenic | 40.0% | |
| TGTTCATATCCTCTCTTTGG+AGG | + | chr8_4:19681602-19681621 | None:intergenic | 40.0% | |
| AAAGTTTCCCTGCTCTTGTT+AGG | + | chr8_4:19681653-19681672 | None:intergenic | 40.0% | |
| ! | TGAAGAAGCTTTTTGGACGT+CGG | - | chr8_4:19681777-19681796 | Msa1317950:CDS | 40.0% |
| !!! | TGCTATTTTCCCTTTCCATG+TGG | + | chr8_4:19681821-19681840 | None:intergenic | 40.0% |
| ! | TCATCACTTGGTGACTACAA+AGG | - | chr8_4:19682142-19682161 | Msa1317950:CDS | 40.0% |
| ! | ATTGTTGTTGACGGGAAAGG+TGG | - | chr8_4:19678958-19678977 | Msa1317950:three_prime_UTR | 45.0% |
| ! | TTGTTGTTGACGGGAAAGGT+GGG | - | chr8_4:19678959-19678978 | Msa1317950:three_prime_UTR | 45.0% |
| ! | GGGTTTGATGCTGTTTGTGA+TGG | - | chr8_4:19678979-19678998 | Msa1317950:three_prime_UTR | 45.0% |
| ! | CTGTTTGTGATGGTGAGTTG+TGG | - | chr8_4:19678989-19679008 | Msa1317950:three_prime_UTR | 45.0% |
| ! | TGATGGTGAGTTGTGGGATT+TGG | - | chr8_4:19678996-19679015 | Msa1317950:three_prime_UTR | 45.0% |
| ! | GTGAGTTGTGGGATTTGGTT+GGG | - | chr8_4:19679001-19679020 | Msa1317950:three_prime_UTR | 45.0% |
| ! | TGAGTTGTGGGATTTGGTTG+GGG | - | chr8_4:19679002-19679021 | Msa1317950:three_prime_UTR | 45.0% |
| ! | GATTTGGTTGGGGAAGAAAG+TGG | - | chr8_4:19679012-19679031 | Msa1317950:three_prime_UTR | 45.0% |
| AGTGGCTTAGGTGTTAACGT+TGG | - | chr8_4:19679030-19679049 | Msa1317950:three_prime_UTR | 45.0% | |
| GAGTCGTGTGTGATGAAAGT+TGG | - | chr8_4:19679096-19679115 | Msa1317950:three_prime_UTR | 45.0% | |
| ! | GCTAAGGTGTTTGATGAGTC+TGG | - | chr8_4:19679123-19679142 | Msa1317950:three_prime_UTR | 45.0% |
| ! | GTCTGGTTTGATGGGGTTTA+AGG | - | chr8_4:19679140-19679159 | Msa1317950:three_prime_UTR | 45.0% |
| ! | TTTGATGGGGTTTAAGGCTG+AGG | - | chr8_4:19679146-19679165 | Msa1317950:three_prime_UTR | 45.0% |
| GAGGTGAATGAGTTGTTGTC+GGG | - | chr8_4:19679165-19679184 | Msa1317950:three_prime_UTR | 45.0% | |
| AATGAGTTGTTGTCGGGTCA+GGG | - | chr8_4:19679171-19679190 | Msa1317950:three_prime_UTR | 45.0% | |
| ! | AGTGCGAATTTCGAGTCTAG+TGG | - | chr8_4:19679255-19679274 | Msa1317950:three_prime_UTR | 45.0% |
| ! | GTGCGAATTTCGAGTCTAGT+GGG | - | chr8_4:19679256-19679275 | Msa1317950:three_prime_UTR | 45.0% |
| ! | TGCGAATTTCGAGTCTAGTG+GGG | - | chr8_4:19679257-19679276 | Msa1317950:three_prime_UTR | 45.0% |
| GGGAGAAAGAAATTCACGGT+GGG | - | chr8_4:19679277-19679296 | Msa1317950:three_prime_UTR | 45.0% | |
| AGAAATTCACGGTGGGAATG+TGG | - | chr8_4:19679284-19679303 | Msa1317950:three_prime_UTR | 45.0% | |
| GAATGTGGTAACTGGAGAGA+AGG | - | chr8_4:19679299-19679318 | Msa1317950:three_prime_UTR | 45.0% | |
| GGTAACTGGAGAGAAGGTTA+AGG | - | chr8_4:19679305-19679324 | Msa1317950:three_prime_UTR | 45.0% | |
| AAGGTTAAGGGTGGAGTTGA+TGG | - | chr8_4:19679318-19679337 | Msa1317950:three_prime_UTR | 45.0% | |
| GTGAAAGAAGTTCCCGATGT+AGG | - | chr8_4:19679381-19679400 | Msa1317950:CDS | 45.0% | |
| CATCCCTCGATTCATCATTC+TGG | + | chr8_4:19679418-19679437 | None:intergenic | 45.0% | |
| CAGAATGATGAATCGAGGGA+TGG | - | chr8_4:19679416-19679435 | Msa1317950:CDS | 45.0% | |
| ATGGTCAGTGATACCGATGT+TGG | - | chr8_4:19679435-19679454 | Msa1317950:CDS | 45.0% | |
| CTCACTCAGCTTTCCAACAT+CGG | + | chr8_4:19679451-19679470 | None:intergenic | 45.0% | |
| GATGTTGGAAAGCTGAGTGA+GGG | - | chr8_4:19679450-19679469 | Msa1317950:CDS | 45.0% | |
| !! | TGAGGGTAATGGTGATGGAA+TGG | - | chr8_4:19679467-19679486 | Msa1317950:CDS | 45.0% |
| AACTGAGGATGCGTCTGATT+TGG | - | chr8_4:19679533-19679552 | Msa1317950:CDS | 45.0% | |
| GAGTCTGGATTGCTGAATGT+TGG | - | chr8_4:19679567-19679586 | Msa1317950:CDS | 45.0% | |
| TCTTAAGAGGAAGAGAGAGG+AGG | - | chr8_4:19679668-19679687 | Msa1317950:CDS | 45.0% | |
| !! | TCAGGCATCGGAACAATTTC+AGG | + | chr8_4:19679747-19679766 | None:intergenic | 45.0% |
| !!! | CACTTTGGCTTTTCAGGCAT+CGG | + | chr8_4:19679759-19679778 | None:intergenic | 45.0% |
| TTACTGTAAGCCCTCCACTT+TGG | + | chr8_4:19679774-19679793 | None:intergenic | 45.0% | |
| CTTACAGTAATCAGGAGGCT+TGG | - | chr8_4:19679784-19679803 | Msa1317950:CDS | 45.0% | |
| GTGGGATCATCATACATGCT+AGG | + | chr8_4:19681035-19681054 | None:intergenic | 45.0% | |
| TCTACAATCTTAGGGAGAGG+GGG | - | chr8_4:19681063-19681082 | Msa1317950:intron | 45.0% | |
| TCGTCAAGTTCATCTGTGCT+AGG | - | chr8_4:19681134-19681153 | Msa1317950:intron | 45.0% | |
| TACAGCCAATGGCCATACTT+GGG | + | chr8_4:19681336-19681355 | None:intergenic | 45.0% | |
| ATACAGCCAATGGCCATACT+TGG | + | chr8_4:19681337-19681356 | None:intergenic | 45.0% | |
| CTTGTCGAAAGGGATCCTAT+AGG | - | chr8_4:19681371-19681390 | Msa1317950:CDS | 45.0% | |
| TCGAAAGGGATCCTATAGGA+AGG | - | chr8_4:19681375-19681394 | Msa1317950:CDS | 45.0% | |
| CGAAAGGGATCCTATAGGAA+GGG | - | chr8_4:19681376-19681395 | Msa1317950:CDS | 45.0% | |
| GAAAGGGATCCTATAGGAAG+GGG | - | chr8_4:19681377-19681396 | Msa1317950:CDS | 45.0% | |
| CTGACACATTCAACAGAACC+TGG | + | chr8_4:19681431-19681450 | None:intergenic | 45.0% | |
| GCTAAAGCTAAGCTGGAGTT+AGG | - | chr8_4:19681473-19681492 | Msa1317950:CDS | 45.0% | |
| ! | TAGGCGTGGCTTTTTACCAT+TGG | - | chr8_4:19681492-19681511 | Msa1317950:CDS | 45.0% |
| CATTGGCGTTTCGATAAGGT+CGG | - | chr8_4:19681509-19681528 | Msa1317950:CDS | 45.0% | |
| GTGAAGATGTTCGGAATTCG+TGG | - | chr8_4:19681531-19681550 | Msa1317950:CDS | 45.0% | |
| GGACAGATGAAGACGAGAAA+AGG | - | chr8_4:19681552-19681571 | Msa1317950:CDS | 45.0% | |
| TATGGTATGCTTTGCGTTGC+AGG | + | chr8_4:19681703-19681722 | None:intergenic | 45.0% | |
| AACGCAAAGCATACCATAGC+AGG | - | chr8_4:19681705-19681724 | Msa1317950:CDS | 45.0% | |
| TACCATAGCAGGCATACACT+TGG | - | chr8_4:19681716-19681735 | Msa1317950:CDS | 45.0% | |
| ! | GAAGAAGCTTTTTGGACGTC+GGG | - | chr8_4:19681778-19681797 | Msa1317950:CDS | 45.0% |
| ! | AAGAAGCTTTTTGGACGTCG+GGG | - | chr8_4:19681779-19681798 | Msa1317950:CDS | 45.0% |
| TAGATTCCAGAGTAGCCACA+TGG | - | chr8_4:19681803-19681822 | Msa1317950:CDS | 45.0% | |
| ! | CCTCCTGTGTTGACAAATGT+TGG | + | chr8_4:19681846-19681865 | None:intergenic | 45.0% |
| CCAACATTTGTCAACACAGG+AGG | - | chr8_4:19681843-19681862 | Msa1317950:CDS | 45.0% | |
| !! | GTTCGTGTTTTGAACAGCGT+AGG | - | chr8_4:19682020-19682039 | Msa1317950:CDS | 45.0% |
| ! | GGTGAGTTGTGGGATTTGGT+TGG | - | chr8_4:19679000-19679019 | Msa1317950:three_prime_UTR | 50.0% |
| GTTGGGGAAGAAAGTGGCTT+AGG | - | chr8_4:19679018-19679037 | Msa1317950:three_prime_UTR | 50.0% | |
| GAATGAGTTGTTGTCGGGTC+AGG | - | chr8_4:19679170-19679189 | Msa1317950:three_prime_UTR | 50.0% | |
| GTGGCTGGAGAGAAGGTTAA+GGG | - | chr8_4:19679204-19679223 | Msa1317950:three_prime_UTR | 50.0% | |
| AAGGTTAAGGGTGGAGCTGA+TGG | - | chr8_4:19679216-19679235 | Msa1317950:three_prime_UTR | 50.0% | |
| GGGGAGAAAGAAATTCACGG+TGG | - | chr8_4:19679276-19679295 | Msa1317950:three_prime_UTR | 50.0% | |
| ACTGGAGAGAAGGTTAAGGG+TGG | - | chr8_4:19679309-19679328 | Msa1317950:three_prime_UTR | 50.0% | |
| !! | TGGAGTTGATGGTGCTAACG+AGG | - | chr8_4:19679329-19679348 | Msa1317950:exon | 50.0% |
| CGATGTTGGAAAGCTGAGTG+AGG | - | chr8_4:19679449-19679468 | Msa1317950:CDS | 50.0% | |
| GGAAAGCTGAGTGAGGGTAA+TGG | - | chr8_4:19679456-19679475 | Msa1317950:CDS | 50.0% | |
| ! | CTGAGTGAGGGTAATGGTGA+TGG | - | chr8_4:19679462-19679481 | Msa1317950:CDS | 50.0% |
| !! | GCGTCTGATTTGGTGAAGAG+CGG | - | chr8_4:19679543-19679562 | Msa1317950:CDS | 50.0% |
| !! | GTTCCGGTAGTGGATTTGTC+TGG | - | chr8_4:19679624-19679643 | Msa1317950:CDS | 50.0% |
| CCACCAGACAAATCCACTAC+CGG | + | chr8_4:19679630-19679649 | None:intergenic | 50.0% | |
| ! | GTGGATTTGTCTGGTGGTGA+TGG | - | chr8_4:19679633-19679652 | Msa1317950:CDS | 50.0% |
| !! | TTGTCTGGTGGTGATGGAAG+TGG | - | chr8_4:19679639-19679658 | Msa1317950:CDS | 50.0% |
| AGGATCACAAGGGTTACTCG+CGG | + | chr8_4:19679727-19679746 | None:intergenic | 50.0% | |
| CGATGCCTGAAAAGCCAAAG+TGG | - | chr8_4:19679757-19679776 | Msa1317950:CDS | 50.0% | |
| TGCCTGAAAAGCCAAAGTGG+AGG | - | chr8_4:19679760-19679779 | Msa1317950:CDS | 50.0% | |
| GCCTGAAAAGCCAAAGTGGA+GGG | - | chr8_4:19679761-19679780 | Msa1317950:CDS | 50.0% | |
| GTGGAGGGCTTACAGTAATC+AGG | - | chr8_4:19679776-19679795 | Msa1317950:CDS | 50.0% | |
| GAGGGCTTACAGTAATCAGG+AGG | - | chr8_4:19679779-19679798 | Msa1317950:CDS | 50.0% | |
| GTAATCAGGAGGCTTGGAAG+CGG | - | chr8_4:19679790-19679809 | Msa1317950:CDS | 50.0% | |
| TAATCAGGAGGCTTGGAAGC+GGG | - | chr8_4:19679791-19679810 | Msa1317950:CDS | 50.0% | |
| CTTGACGAGCTTCGTGAAGA+TGG | + | chr8_4:19681122-19681141 | None:intergenic | 50.0% | |
| AGTTCATCTGTGCTAGGCGA+AGG | - | chr8_4:19681140-19681159 | Msa1317950:intron | 50.0% | |
| TGTGCTAGGCGAAGGAGATT+TGG | - | chr8_4:19681148-19681167 | Msa1317950:intron | 50.0% | |
| CTAGGCGAAGGAGATTTGGA+CGG | - | chr8_4:19681152-19681171 | Msa1317950:intron | 50.0% | |
| TAGGCGAAGGAGATTTGGAC+GGG | - | chr8_4:19681153-19681172 | Msa1317950:intron | 50.0% | |
| TTTCACAGCACGACGACTTG+TGG | + | chr8_4:19681180-19681199 | None:intergenic | 50.0% | |
| CAAGTCGTCGTGCTGTGAAA+CGG | - | chr8_4:19681180-19681199 | Msa1317950:intron | 50.0% | |
| ! | ATCAAGCTGAAGTGCCAGAG+TGG | - | chr8_4:19681270-19681289 | Msa1317950:intron | 50.0% |
| ! | AGTGGTTTGGGACCCAAGTA+TGG | - | chr8_4:19681321-19681340 | Msa1317950:CDS | 50.0% |
| TCCTATAGGAAGGGGAAGAC+AGG | - | chr8_4:19681385-19681404 | Msa1317950:CDS | 50.0% | |
| TCCTGTCTTCCCCTTCCTAT+AGG | + | chr8_4:19681389-19681408 | None:intergenic | 50.0% | |
| AGGGGAAGACAGGATTCATG+CGG | - | chr8_4:19681395-19681414 | Msa1317950:CDS | 50.0% | |
| CGACCTTATCGAAACGCCAA+TGG | + | chr8_4:19681511-19681530 | None:intergenic | 50.0% | |
| CAGCTTTACCCTCCAAAGAG+AGG | - | chr8_4:19681590-19681609 | Msa1317950:CDS | 50.0% | |
| CACCAAGTGTATGCCTGCTA+TGG | + | chr8_4:19681721-19681740 | None:intergenic | 50.0% | |
| TCCAGAGTAGCCACATGGAA+AGG | - | chr8_4:19681808-19681827 | Msa1317950:CDS | 50.0% | |
| CCAGAGTAGCCACATGGAAA+GGG | - | chr8_4:19681809-19681828 | Msa1317950:CDS | 50.0% | |
| !! | CGTTGGTTCGACGCTGAAAC+TGG | - | chr8_4:19679047-19679066 | Msa1317950:three_prime_UTR | 55.0% |
| AGTTGTTGTCGGGTCAGGGT+GGG | - | chr8_4:19679175-19679194 | Msa1317950:three_prime_UTR | 55.0% | |
| GAATGTGGTGGCTGGAGAGA+AGG | - | chr8_4:19679197-19679216 | Msa1317950:three_prime_UTR | 55.0% | |
| GGTGGCTGGAGAGAAGGTTA+AGG | - | chr8_4:19679203-19679222 | Msa1317950:three_prime_UTR | 55.0% | |
| GCTGGAGAGAAGGTTAAGGG+TGG | - | chr8_4:19679207-19679226 | Msa1317950:three_prime_UTR | 55.0% | |
| ! | TGGAGCTGATGGTGCTAACG+AGG | - | chr8_4:19679227-19679246 | Msa1317950:three_prime_UTR | 55.0% |
| CACGGTGGGAATGTGGTAAC+TGG | - | chr8_4:19679291-19679310 | Msa1317950:three_prime_UTR | 55.0% | |
| TTGGTGAAGAGCGGTGAGTC+TGG | - | chr8_4:19679552-19679571 | Msa1317950:CDS | 55.0% | |
| !! | CCGGTAGTGGATTTGTCTGG+TGG | - | chr8_4:19679627-19679646 | Msa1317950:CDS | 55.0% |
| !!! | GCCCTCCACTTTGGCTTTTC+AGG | + | chr8_4:19679765-19679784 | None:intergenic | 55.0% |
| !! | GCGGGTTCTGTTGTTTCGAG+AGG | - | chr8_4:19679809-19679828 | Msa1317950:CDS | 55.0% |
| TGGGACCCAAGTATGGCCAT+TGG | - | chr8_4:19681328-19681347 | Msa1317950:CDS | 55.0% | |
| AGCTAAGCTGGAGTTAGGCG+TGG | - | chr8_4:19681478-19681497 | Msa1317950:CDS | 55.0% | |
| CCCTTTCCATGTGGCTACTC+TGG | + | chr8_4:19681812-19681831 | None:intergenic | 55.0% | |
| GAGTTGTTGTCGGGTCAGGG+TGG | - | chr8_4:19679174-19679193 | Msa1317950:three_prime_UTR | 60.0% | |
| GGATTCGGAGCAGTCCACTC+TGG | + | chr8_4:19681287-19681306 | None:intergenic | 60.0% | |
| GTCGGGTCAGGGTGGGAATG+TGG | - | chr8_4:19679182-19679201 | Msa1317950:three_prime_UTR | 65.0% | |
| GGGTCAGGGTGGGAATGTGG+TGG | - | chr8_4:19679185-19679204 | Msa1317950:three_prime_UTR | 65.0% | |
| CAGGGTGGGAATGTGGTGGC+TGG | - | chr8_4:19679189-19679208 | Msa1317950:three_prime_UTR | 65.0% | |
| !! | GCATCGGCTCGCATCTGCGT+GGG | - | chr8_4:19681239-19681258 | Msa1317950:intron | 65.0% |
| !! | CATCGGCTCGCATCTGCGTG+GGG | - | chr8_4:19681240-19681259 | Msa1317950:intron | 65.0% |
| TCATGCGGCTGCGCAGTTCC+AGG | - | chr8_4:19681410-19681429 | Msa1317950:CDS | 65.0% | |
| !! | GGCATCGGCTCGCATCTGCG+TGG | - | chr8_4:19681238-19681257 | Msa1317950:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 19678916 | 19682234 | 19678916 | ID=Msa1317950;Name=Msa1317950 |
| chr8_4 | mRNA | 19678916 | 19682234 | 19678916 | ID=Msa1317950-mRNA-1;Parent=Msa1317950;Name=Msa1317950-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|1|0.5|1|1|1|2|429|583 |
| chr8_4 | exon | 19678916 | 19680133 | 19678916 | ID=Msa1317950-mRNA-1:exon:7226;Parent=Msa1317950-mRNA-1 |
| chr8_4 | exon | 19681272 | 19682234 | 19681272 | ID=Msa1317950-mRNA-1:exon:7225;Parent=Msa1317950-mRNA-1 |
| chr8_4 | CDS | 19681272 | 19682234 | 19681272 | ID=Msa1317950-mRNA-1:cds;Parent=Msa1317950-mRNA-1 |
| chr8_4 | CDS | 19679345 | 19680133 | 19679345 | ID=Msa1317950-mRNA-1:cds;Parent=Msa1317950-mRNA-1 |
| chr8_4 | three_prime_UTR | 19678916 | 19679344 | 19678916 | ID=Msa1317950-mRNA-1:three_prime_utr;Parent=Msa1317950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
