AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0508780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0508780 MtrunA17_Chr3g0113321 97.551 490 10 1 1 488 1 490 0.0 983
Msa0508780 MtrunA17_Chr5g0403931 42.105 456 253 8 1 449 11 462 5.40e-125 373
Msa0508780 MtrunA17_Chr8g0341951 37.736 477 273 7 7 467 5 473 8.36e-116 349
Msa0508780 MtrunA17_Chr8g0372411 37.698 443 262 5 28 463 40 475 1.03e-111 338
Msa0508780 MtrunA17_Chr7g0226771 38.074 457 271 5 1 451 5 455 1.95e-110 335
Msa0508780 MtrunA17_Chr8g0373441 42.893 394 213 7 7 392 15 404 2.56e-110 333
Msa0508780 MtrunA17_Chr6g0455461 37.662 462 264 9 1 451 1 449 7.72e-106 323
Msa0508780 MtrunA17_Chr3g0078411 37.446 462 265 9 1 451 1 449 4.30e-104 318
Msa0508780 MtrunA17_Chr7g0219961 36.105 457 273 7 1 451 5 448 2.50e-102 314
Msa0508780 MtrunA17_Chr6g0478161 34.855 482 295 8 4 471 19 495 3.25e-102 315
Msa0508780 MtrunA17_Chr5g0436981 89.865 148 15 0 24 171 25 172 4.11e-96 288
Msa0508780 MtrunA17_Chr5g0397971 34.889 450 279 6 26 468 30 472 2.30e-95 296
Msa0508780 MtrunA17_Chr8g0369791 32.409 469 290 10 3 461 9 460 7.67e-85 269
Msa0508780 MtrunA17_Chr5g0408181 33.333 462 286 10 5 461 14 458 4.98e-83 264
Msa0508780 MtrunA17_Chr5g0437001 77.215 158 21 3 325 469 1 156 1.45e-78 242
Msa0508780 MtrunA17_Chr2g0293421 34.742 426 261 8 19 434 37 455 5.31e-76 246
Msa0508780 MtrunA17_Chr1g0153371 31.991 447 276 7 5 436 5 438 4.44e-75 244
Msa0508780 MtrunA17_Chr4g0044851 32.394 426 263 8 23 439 33 442 1.27e-74 243
Msa0508780 MtrunA17_Chr5g0436991 84.444 135 20 1 167 301 22 155 1.40e-72 226
Msa0508780 MtrunA17_Chr8g0381571 31.529 425 273 7 19 431 35 453 8.71e-71 233
Msa0508780 MtrunA17_Chr8g0381541 31.529 425 273 7 19 431 35 453 1.25e-70 233
Msa0508780 MtrunA17_Chr1g0164371 31.368 424 275 7 4 423 21 432 6.29e-70 230
Msa0508780 MtrunA17_Chr5g0443401 31.613 465 290 12 1 448 5 458 2.00e-69 229
Msa0508780 MtrunA17_Chr2g0293411 30.803 461 300 8 19 466 33 487 2.53e-69 229
Msa0508780 MtrunA17_Chr5g0443731 31.517 422 276 7 26 439 28 444 1.80e-68 226
Msa0508780 MtrunA17_Chr3g0089361 32.401 429 257 13 26 439 39 449 7.55e-68 225
Msa0508780 MtrunA17_Chr4g0044841 30.879 421 276 5 23 439 34 443 1.00e-67 224
Msa0508780 MtrunA17_Chr5g0400421 31.323 431 255 9 27 434 45 457 3.20e-67 224
Msa0508780 MtrunA17_Chr8g0388921 30.753 478 302 13 1 461 7 472 7.82e-65 217
Msa0508780 MtrunA17_Chr8g0380471 29.598 473 308 14 2 461 11 471 5.12e-62 209
Msa0508780 MtrunA17_Chr3g0141801 32.522 452 275 10 27 461 41 479 2.03e-60 206
Msa0508780 MtrunA17_Chr8g0339861 31.776 428 269 12 19 434 37 453 4.42e-60 205
Msa0508780 MtrunA17_Chr3g0089351 31.510 384 236 10 66 439 1 367 1.51e-58 198
Msa0508780 MtrunA17_Chr5g0400411 31.132 424 264 12 27 434 45 456 9.42e-57 196
Msa0508780 MtrunA17_Chr3g0107501 29.577 426 278 9 27 439 33 449 2.62e-56 194
Msa0508780 MtrunA17_Chr8g0372711 30.930 430 275 8 29 448 48 465 3.03e-54 189
Msa0508780 MtrunA17_Chr3g0107511 27.235 481 327 10 1 466 5 477 3.20e-53 186
Msa0508780 MtrunA17_Chr8g0380931 27.373 453 295 12 12 444 47 485 1.58e-50 179
Msa0508780 MtrunA17_Chr5g0404861 48.630 146 71 2 319 464 16 157 2.96e-45 155
Msa0508780 MtrunA17_Chr5g0404881 35.644 202 128 2 19 219 29 229 2.76e-39 142
Msa0508780 MtrunA17_Chr8g0381551 26.871 294 203 5 19 301 35 327 3.11e-30 120
Msa0508780 MtrunA17_Chr8g0381561 44.860 107 54 1 325 431 3 104 1.40e-27 107
Msa0508780 MtrunA17_Chr6g0463551 34.146 205 115 5 178 370 2 198 2.69e-27 108
Msa0508780 MtrunA17_Chr4g0000171 25.418 299 207 8 19 306 35 328 4.16e-25 105
Msa0508780 MtrunA17_Chr1g0161671 24.051 316 219 7 1 301 3 312 2.11e-24 103
Msa0508780 MtrunA17_Chr4g0000151 45.714 105 49 3 331 434 12 109 1.79e-23 96.3
Msa0508780 MtrunA17_Chr5g0395321 24.512 461 314 15 1 439 15 463 1.97e-23 103
Msa0508780 MtrunA17_Chr5g0395381 23.454 469 289 19 1 439 10 438 2.32e-23 102
Msa0508780 MtrunA17_Chr4g0013471 27.759 299 186 12 27 307 43 329 3.45e-23 101
Msa0508780 MtrunA17_Chr1g0198191 23.418 474 320 13 3 439 16 483 4.60e-23 102
Msa0508780 MtrunA17_Chr1g0197871 24.841 471 305 18 1 439 8 461 1.35e-22 100
Msa0508780 MtrunA17_Chr2g0314731 30.081 246 155 7 206 439 223 463 1.54e-22 100
Msa0508780 MtrunA17_Chr1g0160851 24.619 459 299 16 13 439 20 463 1.91e-22 100
Msa0508780 MtrunA17_Chr4g0039901 25.380 461 296 16 20 447 28 473 3.53e-22 99.4
Msa0508780 MtrunA17_Chr0c19g0493771 23.133 415 267 10 63 439 218 618 5.72e-22 99.4
Msa0508780 MtrunA17_Chr1g0197891 24.094 469 311 15 1 439 8 461 1.07e-21 97.8
Msa0508780 MtrunA17_Chr2g0314721 29.960 247 154 7 206 439 234 474 1.12e-21 97.8
Msa0508780 MtrunA17_Chr3g0089381 27.320 194 134 3 168 357 2 192 1.55e-21 93.2
Msa0508780 MtrunA17_Chr1g0197881 27.599 279 178 8 180 439 187 460 1.62e-21 97.4
Msa0508780 MtrunA17_Chr1g0197851 27.599 279 178 8 180 439 188 461 1.83e-21 97.1
Msa0508780 MtrunA17_Chr1g0176831 31.250 224 140 6 234 451 290 505 2.59e-21 97.1
Msa0508780 MtrunA17_Chr7g0246221 22.246 472 312 15 12 443 17 473 4.72e-21 95.9
Msa0508780 MtrunA17_Chr5g0395331 24.464 466 300 18 11 439 20 470 4.75e-21 95.9
Msa0508780 MtrunA17_Chr2g0313791 28.814 295 169 11 164 438 212 485 7.88e-21 95.5
Msa0508780 MtrunA17_Chr1g0160861 28.139 231 157 6 214 439 78 304 9.98e-21 93.2
Msa0508780 MtrunA17_Chr1g0164211 25.328 458 271 17 26 439 30 460 1.00e-20 95.1
Msa0508780 MtrunA17_Chr7g0255531 28.807 243 159 6 206 443 233 466 1.25e-20 94.7
Msa0508780 MtrunA17_Chr1g0205371 25.053 475 303 17 2 439 6 464 2.51e-20 94.0
Msa0508780 MtrunA17_Chr8g0356001 28.085 235 154 7 214 439 244 472 5.68e-20 92.8
Msa0508780 MtrunA17_Chr8g0355961 24.843 479 297 18 6 439 12 472 1.77e-19 91.3
Msa0508780 MtrunA17_Chr2g0313831 27.869 244 151 6 188 418 235 466 3.47e-19 90.5
Msa0508780 MtrunA17_Chr5g0403351 23.629 474 303 17 2 430 3 462 6.16e-19 89.7
Msa0508780 MtrunA17_Chr3g0089291 24.167 240 170 5 66 299 1 234 6.97e-19 85.9
Msa0508780 MtrunA17_Chr5g0405001 21.639 476 319 13 4 439 18 479 1.28e-18 88.6
Msa0508780 MtrunA17_Chr6g0451781 29.487 234 144 8 215 431 291 520 1.31e-18 89.0
Msa0508780 MtrunA17_Chr5g0431501 22.697 445 303 14 27 439 33 468 1.36e-18 88.6
Msa0508780 MtrunA17_Chr5g0431461 22.697 445 303 14 27 439 33 468 1.36e-18 88.6
Msa0508780 MtrunA17_Chr2g0313821 25.850 294 179 9 164 438 217 490 1.81e-18 88.2
Msa0508780 MtrunA17_Chr2g0313811 27.458 295 173 11 164 438 229 502 2.35e-18 87.8
Msa0508780 MtrunA17_Chr2g0313801 28.028 289 167 11 164 432 217 484 2.48e-18 87.8
Msa0508780 MtrunA17_Chr3g0116741 22.766 470 314 14 4 439 27 481 2.94e-18 87.4
Msa0508780 MtrunA17_Chr6g0457421 28.163 245 160 7 209 446 250 485 3.54e-18 87.4
Msa0508780 MtrunA17_Chr1g0205361 24.094 469 308 19 4 439 10 463 4.44e-18 87.0
Msa0508780 MtrunA17_Chr6g0451811 31.214 173 106 6 267 431 1 168 5.85e-18 82.4
Msa0508780 MtrunA17_Chr2g0313781 27.843 255 152 8 198 432 254 496 6.24e-18 86.7
Msa0508780 MtrunA17_Chr4g0000161 24.828 290 194 10 27 301 43 323 1.00e-17 84.3
Msa0508780 MtrunA17_Chr5g0403321 26.860 242 152 7 208 430 230 465 1.15e-17 85.5
Msa0508780 MtrunA17_Chr1g0200961 23.855 524 301 17 1 465 2 486 1.31e-17 85.5
Msa0508780 MtrunA17_Chr5g0445461 24.413 213 149 4 235 439 258 466 1.45e-17 85.5
Msa0508780 MtrunA17_Chr5g0431511 26.271 236 157 6 243 470 280 506 2.78e-17 84.3
Msa0508780 MtrunA17_Chr7g0265611 27.234 235 158 4 214 439 253 483 3.55e-17 84.3
Msa0508780 MtrunA17_Chr4g0058281 26.768 198 134 4 243 439 292 479 3.78e-17 84.0
Msa0508780 MtrunA17_Chr2g0288661 25.084 299 190 8 191 465 229 517 4.03e-17 84.0
Msa0508780 MtrunA17_Chr7g0224551 24.841 471 280 21 1 422 6 451 4.14e-17 84.0
Msa0508780 MtrunA17_Chr8g0344191 23.469 490 294 20 3 439 43 504 4.17e-17 84.0
Msa0508780 MtrunA17_Chr4g0052851 27.126 247 154 6 241 470 256 493 4.33e-17 84.0
Msa0508780 MtrunA17_Chr8g0339331 29.060 234 147 7 215 434 249 477 4.54e-17 84.0
Msa0508780 MtrunA17_Chr8g0351801 26.316 323 199 9 160 446 172 491 5.10e-17 83.6
Msa0508780 MtrunA17_Chr6g0463541 38.053 113 63 3 353 464 2 108 7.92e-17 76.3
Msa0508780 MtrunA17_Chr2g0313771 25.952 289 180 9 164 438 225 493 9.00e-17 82.8
Msa0508780 MtrunA17_Chr1g0174441 22.140 271 182 6 214 463 259 521 1.03e-16 82.8
Msa0508780 MtrunA17_Chr7g0218611 26.496 234 157 5 215 439 239 466 1.32e-16 82.4
Msa0508780 MtrunA17_Chr1g0179811 27.273 231 154 5 211 433 284 508 2.23e-16 81.6
Msa0508780 MtrunA17_Chr7g0248991 24.701 251 153 6 168 391 110 351 2.38e-16 80.5
Msa0508780 MtrunA17_Chr4g0056951 23.171 246 170 6 230 466 263 498 2.76e-16 81.3
Msa0508780 MtrunA17_Chr7g0246131 23.340 467 314 16 12 443 17 474 2.90e-16 81.3
Msa0508780 MtrunA17_Chr6g0451691 26.471 238 147 8 217 431 259 491 2.95e-16 81.3
Msa0508780 MtrunA17_Chr3g0101621 27.143 210 146 4 232 439 253 457 3.49e-16 80.9
Msa0508780 MtrunA17_Chr2g0310391 21.397 458 318 15 6 431 8 455 3.97e-16 80.9
Msa0508780 MtrunA17_Chr1g0203141 25.540 278 184 9 201 464 245 513 4.39e-16 80.9
Msa0508780 MtrunA17_Chr3g0101631 27.523 218 137 6 230 439 258 462 4.55e-16 80.5
Msa0508780 MtrunA17_Chr2g0314781 31.126 151 99 3 290 439 4 150 4.73e-16 75.9
Msa0508780 MtrunA17_Chr7g0215181 27.126 247 160 8 204 439 243 480 4.77e-16 80.5
Msa0508780 MtrunA17_Chr4g0053621 25.778 225 147 6 229 447 261 471 5.14e-16 80.5
Msa0508780 MtrunA17_Chr3g0101601 26.887 212 148 4 230 439 257 463 5.22e-16 80.5
Msa0508780 MtrunA17_Chr4g0076161 22.182 275 189 5 174 439 211 469 6.78e-16 80.1
Msa0508780 MtrunA17_Chr7g0246121 24.706 255 177 6 198 443 222 470 8.78e-16 79.7
Msa0508780 MtrunA17_Chr7g0224561 24.416 471 282 21 1 422 6 451 8.79e-16 79.7
Msa0508780 MtrunA17_Chr4g0011851 27.957 186 123 5 258 439 3 181 8.85e-16 76.3
Msa0508780 MtrunA17_Chr4g0058231 30.682 176 113 4 267 439 298 467 1.07e-15 79.3
Msa0508780 MtrunA17_Chr4g0047641 26.636 214 146 4 233 439 273 482 1.54e-15 79.0
Msa0508780 MtrunA17_Chr4g0035921 23.111 225 153 3 232 439 258 479 1.60e-15 79.0
Msa0508780 MtrunA17_Chr3g0128461 23.629 474 290 15 18 438 40 494 1.86e-15 79.0
Msa0508780 MtrunA17_Chr8g0362481 23.735 257 173 5 222 463 182 430 2.06e-15 78.2
Msa0508780 MtrunA17_Chr4g0057001 23.673 245 169 6 230 466 269 503 2.18e-15 78.6
Msa0508780 MtrunA17_Chr8g0377341 24.031 258 171 8 198 443 255 499 2.46e-15 78.6
Msa0508780 MtrunA17_Chr1g0174471 24.299 214 152 3 233 439 279 489 2.54e-15 78.6
Msa0508780 MtrunA17_Chr4g0074581 25.362 276 182 5 188 442 242 514 3.19e-15 78.2
Msa0508780 MtrunA17_Chr3g0082701 25.595 504 266 28 6 431 16 488 3.62e-15 77.8
Msa0508780 MtrunA17_Chr8g0336361 25.000 280 154 7 198 430 250 520 3.72e-15 78.2
Msa0508780 MtrunA17_Chr2g0307291 23.024 291 196 7 196 465 234 517 3.74e-15 77.8
Msa0508780 MtrunA17_Chr3g0094231 27.861 201 134 4 247 439 271 468 3.81e-15 77.8
Msa0508780 MtrunA17_Chr2g0313761 24.014 279 186 7 206 467 243 512 4.24e-15 77.8
Msa0508780 MtrunA17_Chr4g0058191 25.311 241 169 4 206 439 220 456 5.24e-15 77.4
Msa0508780 MtrunA17_Chr2g0307301 25.000 240 158 5 196 418 234 468 5.83e-15 77.4
Msa0508780 MtrunA17_Chr8g0372251 24.336 226 145 4 215 420 233 452 6.05e-15 77.0
Msa0508780 MtrunA17_Chr8g0354531 23.904 251 167 6 206 438 375 619 7.75e-15 77.0
Msa0508780 MtrunA17_Chr8g0382901 20.957 439 313 11 26 439 491 920 8.35e-15 77.4
Msa0508780 MtrunA17_Chr4g0004601 26.275 255 155 8 198 436 262 499 8.91e-15 76.6
Msa0508780 MtrunA17_Chr7g0235551 23.182 220 154 4 233 440 259 475 1.09e-14 76.3
Msa0508780 MtrunA17_Chr3g0084921 26.432 227 147 5 232 444 262 482 1.15e-14 76.3
Msa0508780 MtrunA17_Chr4g0046321 22.549 408 275 13 62 434 66 467 1.36e-14 76.3
Msa0508780 MtrunA17_Chr3g0086651 25.899 278 180 10 182 439 201 472 1.48e-14 75.9
Msa0508780 MtrunA17_Chr7g0218601 24.766 214 144 4 232 439 263 465 1.57e-14 75.9
Msa0508780 MtrunA17_Chr8g0346261 22.727 220 163 5 228 444 303 518 1.66e-14 75.9
Msa0508780 MtrunA17_Chr4g0058201 27.197 239 159 6 210 439 226 458 1.72e-14 75.9
Msa0508780 MtrunA17_Chr2g0280121 26.230 244 168 5 208 439 235 478 1.83e-14 75.9
Msa0508780 MtrunA17_Chr4g0046681 27.717 184 120 7 256 431 16 194 1.89e-14 72.8
Msa0508780 MtrunA17_Chr4g0063221 23.487 413 266 14 63 438 94 493 2.01e-14 75.5
Msa0508780 MtrunA17_Chr8g0344181 22.998 487 301 17 1 439 12 472 2.19e-14 75.5
Msa0508780 MtrunA17_Chr4g0061381 25.095 263 173 8 195 439 213 469 2.23e-14 75.5
Msa0508780 MtrunA17_Chr1g0174461 24.880 209 146 4 233 434 264 468 2.34e-14 75.5
Msa0508780 MtrunA17_Chr4g0046351 22.727 242 163 6 206 434 237 467 2.50e-14 75.5
Msa0508780 MtrunA17_Chr8g0390881 22.081 471 325 18 1 439 10 470 2.66e-14 75.1
Msa0508780 MtrunA17_Chr8g0362701 22.672 247 168 5 232 463 261 499 3.46e-14 74.7
Msa0508780 MtrunA17_Chr6g0458561 25.856 263 168 9 189 431 236 491 3.75e-14 74.7
Msa0508780 MtrunA17_Chr4g0052861 25.571 219 145 5 236 447 260 467 3.92e-14 74.7
Msa0508780 MtrunA17_Chr5g0401681 25.000 216 148 4 237 447 261 467 4.14e-14 74.7
Msa0508780 MtrunA17_Chr5g0445421 22.059 476 283 16 6 439 90 519 5.88e-14 74.3
Msa0508780 MtrunA17_Chr4g0017411 25.000 228 157 4 217 439 229 447 5.89e-14 73.9
Msa0508780 MtrunA17_Chr3g0086661 25.540 278 181 10 182 439 201 472 8.76e-14 73.6
Msa0508780 MtrunA17_Chr5g0401691 25.543 184 129 3 257 439 300 476 9.63e-14 73.6
Msa0508780 MtrunA17_Chr5g0430081 26.087 253 159 10 205 439 226 468 9.95e-14 73.6
Msa0508780 MtrunA17_Chr1g0174431 25.714 175 121 3 271 439 1 172 1.01e-13 70.5
Msa0508780 MtrunA17_Chr4g0058261 23.404 235 171 5 209 439 268 497 1.02e-13 73.6
Msa0508780 MtrunA17_Chr1g0174451 23.423 222 155 4 230 439 256 474 1.40e-13 72.8
Msa0508780 MtrunA17_Chr4g0030711 24.390 287 193 6 162 439 210 481 2.16e-13 72.4
Msa0508780 MtrunA17_Chr5g0445451 24.286 210 145 5 240 439 261 466 2.20e-13 72.4
Msa0508780 MtrunA17_Chr4g0058211 27.059 170 119 3 271 439 19 184 2.43e-13 69.3
Msa0508780 MtrunA17_Chr4g0046331 22.131 244 164 6 206 434 237 469 2.48e-13 72.0
Msa0508780 MtrunA17_Chr3g0116681 24.254 268 179 9 188 439 210 469 2.72e-13 72.0
Msa0508780 MtrunA17_Chr7g0258221 25.463 216 151 4 231 439 260 472 3.44e-13 71.6
Msa0508780 MtrunA17_Chr2g0296661 25.000 192 134 4 257 447 290 472 4.90e-13 71.2
Msa0508780 MtrunA17_Chr4g0039391 24.521 261 180 8 190 439 214 468 5.28e-13 71.2
Msa0508780 MtrunA17_Chr8g0361471 25.714 210 140 6 235 432 259 464 5.44e-13 71.2
Msa0508780 MtrunA17_Chr4g0014051 23.349 424 258 17 54 432 95 496 5.53e-13 71.2
Msa0508780 MtrunA17_Chr8g0387101 25.410 244 170 5 208 439 231 474 5.64e-13 70.9
Msa0508780 MtrunA17_Chr5g0446101 25.444 169 122 2 271 439 115 279 7.10e-13 69.3
Msa0508780 MtrunA17_Chr5g0445441 23.333 210 147 5 240 439 302 507 9.16e-13 70.5
Msa0508780 MtrunA17_Chr5g0446161 24.457 184 135 2 256 439 287 466 9.23e-13 70.5
Msa0508780 MtrunA17_Chr4g0052881 21.250 240 179 3 209 447 238 468 1.08e-12 70.1
Msa0508780 MtrunA17_Chr2g0280081 27.273 187 130 4 258 439 788 973 1.23e-12 70.5
Msa0508780 MtrunA17_Chr6g0463561 30.052 193 122 6 4 193 14 196 1.25e-12 66.6
Msa0508780 MtrunA17_Chr6g0479681 24.818 274 175 9 216 464 260 527 2.16e-12 69.3
Msa0508780 MtrunA17_Chr6g0451771 25.714 175 119 5 264 431 15 185 2.43e-12 66.6
Msa0508780 MtrunA17_Chr6g0465511 25.837 209 139 6 235 431 259 463 2.59e-12 68.9
Msa0508780 MtrunA17_Chr8g0362731 27.933 179 113 4 264 436 208 376 2.87e-12 68.6
Msa0508780 MtrunA17_Chr6g0466331 25.714 210 140 6 235 432 259 464 2.88e-12 68.9
Msa0508780 MtrunA17_Chr6g0463791 25.287 174 123 3 274 443 300 470 3.33e-12 68.6
Msa0508780 MtrunA17_Chr3g0101571 25.207 242 162 8 211 439 230 465 3.40e-12 68.6
Msa0508780 MtrunA17_Chr5g0406651 26.816 179 126 3 262 439 289 463 4.03e-12 68.2
Msa0508780 MtrunA17_Chr1g0154731 23.210 405 263 13 63 438 88 473 4.03e-12 68.2
Msa0508780 MtrunA17_Chr1g0161641 37.838 74 41 1 358 431 13 81 5.62e-12 61.6
Msa0508780 MtrunA17_Chr1g0203151 24.046 262 176 8 216 464 258 509 6.50e-12 67.8
Msa0508780 MtrunA17_Chr8g0334941 25.630 238 157 6 195 422 55 282 8.28e-12 66.6
Msa0508780 MtrunA17_Chr3g0089371 30.357 112 71 4 26 133 39 147 9.69e-12 64.3
Msa0508780 MtrunA17_Chr8g0373431 39.683 63 38 0 404 466 4 66 1.33e-11 60.1
Msa0508780 MtrunA17_Chr4g0008101 26.512 215 137 8 232 431 279 487 1.83e-11 66.2
Msa0508780 MtrunA17_Chr1g0204271 25.532 235 162 5 231 455 261 492 2.25e-11 65.9
Msa0508780 MtrunA17_Chr8g0339311 24.766 214 140 6 235 434 279 485 4.21e-11 65.1
Msa0508780 MtrunA17_Chr7g0258211 21.212 297 196 6 162 447 217 486 6.07e-11 64.7
Msa0508780 MtrunA17_Chr6g0484841 22.200 500 319 19 13 457 23 507 6.60e-11 64.7
Msa0508780 MtrunA17_Chr5g0445761 26.316 171 119 4 271 439 1 166 7.50e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0508780 AT5G05690.1 79.505 444 89 1 27 470 31 472 0.0 734
Msa0508780 AT5G05690.2 80.109 367 73 0 27 393 31 397 0.0 609
Msa0508780 AT5G05690.3 79.437 355 71 1 116 470 1 353 0.0 575
Msa0508780 AT3G50660.1 39.419 482 258 6 18 465 30 511 3.84e-121 364
Msa0508780 AT4G36380.1 40.133 451 258 7 27 469 69 515 2.06e-110 337
Msa0508780 AT3G13730.1 37.360 447 267 6 26 465 50 490 4.55e-109 333
Msa0508780 AT1G73340.1 36.383 470 285 5 4 467 20 481 3.68e-108 330
Msa0508780 AT3G50660.2 39.312 407 220 5 18 397 30 436 1.33e-100 309
Msa0508780 AT3G13730.2 37.081 418 251 5 26 436 50 462 5.04e-100 308
Msa0508780 AT3G30180.1 36.052 466 278 7 1 459 6 458 2.68e-94 294
Msa0508780 AT1G12740.1 35.849 424 258 6 23 439 27 443 7.92e-94 293
Msa0508780 AT1G12740.2 35.581 430 257 7 23 439 27 449 1.65e-91 287
Msa0508780 AT1G12740.4 35.349 430 258 7 23 439 27 449 3.89e-91 286
Msa0508780 AT5G38970.1 35.307 456 277 8 1 451 8 450 6.56e-90 282
Msa0508780 AT4G19230.1 31.974 466 295 8 9 468 15 464 3.35e-89 281
Msa0508780 AT5G14400.2 36.562 413 233 6 32 439 1 389 2.92e-85 269
Msa0508780 AT5G14400.3 36.473 414 234 6 32 440 1 390 6.54e-85 267
Msa0508780 AT5G45340.1 30.886 463 303 6 6 466 15 462 1.85e-84 268
Msa0508780 AT4G19230.2 32.333 433 272 7 9 436 15 431 2.84e-83 266
Msa0508780 AT5G45340.2 31.236 445 290 5 6 449 15 444 5.37e-82 261
Msa0508780 AT3G19270.2 31.447 477 299 9 3 466 5 466 9.91e-79 253
Msa0508780 AT3G19270.1 32.000 450 279 8 3 440 5 439 1.43e-77 249
Msa0508780 AT5G38970.3 33.838 396 248 6 1 391 8 394 1.35e-74 241
Msa0508780 AT1G55940.2 31.603 443 289 8 26 457 44 483 3.25e-74 243
Msa0508780 AT1G55940.1 32.542 421 270 8 26 435 44 461 4.53e-74 241
Msa0508780 AT5G38970.2 35.372 376 230 6 81 451 2 369 4.37e-73 236
Msa0508780 AT5G38970.4 35.372 376 230 6 81 451 2 369 4.37e-73 236
Msa0508780 AT2G32440.2 31.429 455 284 7 4 436 8 456 6.27e-73 239
Msa0508780 AT2G32440.1 31.429 455 284 7 4 436 8 456 6.27e-73 239
Msa0508780 AT5G14400.4 37.160 331 202 4 32 357 1 330 4.12e-71 229
Msa0508780 AT1G05160.2 32.658 444 279 9 24 454 42 478 4.23e-71 234
Msa0508780 AT1G05160.1 32.658 444 279 9 24 454 42 478 4.23e-71 234
Msa0508780 AT3G44970.1 34.118 425 252 9 26 435 34 445 6.07e-71 233
Msa0508780 AT2G29090.2 31.403 449 284 10 24 463 46 479 7.75e-71 233
Msa0508780 AT2G29090.1 31.403 449 284 10 24 463 46 479 7.75e-71 233
Msa0508780 AT5G48000.2 32.444 450 286 9 26 465 34 475 6.50e-70 231
Msa0508780 AT5G48000.4 32.444 450 286 9 26 465 34 475 6.50e-70 231
Msa0508780 AT5G48000.7 32.444 450 286 9 26 465 34 475 6.50e-70 231
Msa0508780 AT5G48000.6 32.444 450 286 9 26 465 34 475 6.50e-70 231
Msa0508780 AT5G48000.5 32.444 450 286 9 26 465 34 475 6.50e-70 231
Msa0508780 AT5G48000.3 32.444 450 286 9 26 465 34 475 6.50e-70 231
Msa0508780 AT5G48000.1 32.444 450 286 9 26 465 75 516 1.43e-69 231
Msa0508780 AT1G19630.1 32.892 453 279 8 27 466 35 475 1.54e-69 229
Msa0508780 AT4G36380.2 37.168 339 204 5 27 357 69 406 2.01e-68 225
Msa0508780 AT1G12740.3 34.503 342 213 5 23 357 27 364 2.07e-68 223
Msa0508780 AT5G36110.1 29.663 445 296 8 27 461 34 471 2.14e-68 227
Msa0508780 AT5G14400.1 35.475 358 202 6 87 439 2 335 2.41e-66 218
Msa0508780 AT4G15300.2 32.143 420 269 8 26 439 34 443 3.25e-66 221
Msa0508780 AT4G15300.3 32.143 420 269 8 26 439 24 433 3.76e-66 220
Msa0508780 AT1G19630.3 32.624 423 266 6 27 440 35 447 1.93e-65 218
Msa0508780 AT1G78490.1 30.415 434 288 6 26 451 34 461 3.36e-65 218
Msa0508780 AT2G42850.1 33.570 423 259 9 27 439 45 455 7.20e-63 212
Msa0508780 AT1G65670.1 30.238 420 273 8 26 439 34 439 1.49e-62 211
Msa0508780 AT4G15396.1 30.140 428 284 9 27 448 35 453 3.72e-59 202
Msa0508780 AT4G15300.1 30.543 442 269 10 26 439 24 455 1.28e-58 201
Msa0508780 AT4G15396.3 30.435 414 272 9 27 433 35 439 1.38e-58 200
Msa0508780 AT4G15393.2 29.535 430 284 9 26 448 34 451 3.22e-58 199
Msa0508780 AT1G78490.2 31.200 375 247 5 26 392 34 405 2.25e-56 193
Msa0508780 AT1G19630.2 32.105 380 245 5 27 397 35 410 3.94e-56 193
Msa0508780 AT3G30290.1 30.607 379 247 8 67 439 5 373 7.71e-53 184
Msa0508780 AT4G15310.1 27.602 442 300 9 26 462 35 461 3.90e-51 181
Msa0508780 AT4G15396.2 28.738 428 269 10 27 448 35 432 1.69e-50 179
Msa0508780 AT2G29090.3 28.499 393 261 9 80 463 3 384 2.50e-49 174
Msa0508780 AT4G15396.4 29.839 372 249 7 27 392 35 400 3.98e-48 171
Msa0508780 AT4G15393.1 29.679 374 247 7 26 392 34 398 4.72e-48 171
Msa0508780 AT5G36110.2 28.161 348 240 6 27 366 34 379 1.70e-45 163
Msa0508780 AT2G42850.2 32.759 348 222 7 27 366 45 388 3.64e-43 157
Msa0508780 AT4G15393.3 26.667 375 226 6 26 393 34 366 3.87e-39 145
Msa0508780 AT3G44970.2 30.514 331 205 8 26 341 34 354 9.27e-38 142
Msa0508780 AT2G29090.4 29.577 284 184 7 24 300 46 320 3.08e-36 137
Msa0508780 AT5G36140.1 29.682 283 190 6 17 294 25 303 3.09e-35 134
Msa0508780 AT1G31800.1 25.628 398 236 12 63 418 139 518 1.58e-23 104
Msa0508780 AT4G37410.1 27.236 246 172 4 204 447 226 466 6.47e-23 102
Msa0508780 AT5G36130.1 35.252 139 83 2 325 461 1 134 7.93e-22 92.0
Msa0508780 AT4G37400.1 24.809 262 190 4 204 461 224 482 1.67e-21 97.8
Msa0508780 AT1G11600.1 23.984 492 304 17 8 444 7 483 2.83e-20 94.0
Msa0508780 AT4G37430.1 22.289 498 300 19 4 444 1 468 2.85e-19 90.9
Msa0508780 AT4G37310.1 25.532 235 165 4 213 439 237 469 1.70e-18 88.6
Msa0508780 AT1G66540.2 27.273 242 158 6 204 439 56 285 2.21e-18 86.7
Msa0508780 AT1G66540.1 27.273 242 158 6 204 439 115 344 4.07e-18 86.7
Msa0508780 AT4G37370.1 25.969 258 167 6 208 454 233 477 7.96e-18 86.7
Msa0508780 AT3G20950.1 25.846 325 203 11 144 439 166 481 8.91e-18 86.7
Msa0508780 AT3G53130.1 29.596 223 137 7 223 433 294 508 3.03e-17 84.7
Msa0508780 AT2G40890.1 26.364 220 147 6 236 446 255 468 4.26e-17 84.3
Msa0508780 AT2G45550.1 24.696 247 165 7 237 466 266 508 5.28e-17 84.0
Msa0508780 AT5G04660.1 24.918 305 198 9 160 440 183 480 5.58e-17 84.0
Msa0508780 AT5G04330.1 23.853 218 152 3 232 439 257 470 6.56e-17 83.6
Msa0508780 AT5G67310.1 27.778 288 179 9 171 439 191 468 6.58e-17 83.6
Msa0508780 AT5G25120.1 25.551 227 156 5 222 439 237 459 8.99e-17 83.2
Msa0508780 AT5G52400.1 21.818 440 301 15 54 464 92 517 1.03e-16 83.2
Msa0508780 AT2G26710.1 24.454 458 283 19 25 438 47 485 1.30e-16 82.8
Msa0508780 AT3G10570.1 27.165 254 169 6 198 439 231 480 1.34e-16 82.8
Msa0508780 AT3G26310.1 25.758 198 137 4 243 439 274 462 1.83e-16 82.4
Msa0508780 AT5G25140.1 26.471 204 137 5 245 439 260 459 1.92e-16 82.4
Msa0508780 AT3G28740.1 26.693 251 161 8 206 447 237 473 1.97e-16 82.4
Msa0508780 AT3G48520.1 25.223 337 212 12 160 466 173 499 2.71e-16 81.6
Msa0508780 AT2G23190.1 23.800 479 297 19 3 439 49 501 3.01e-16 81.6
Msa0508780 AT2G45580.2 24.609 256 169 5 188 439 85 320 3.02e-16 80.5
Msa0508780 AT2G23220.1 24.904 261 176 6 204 453 244 495 3.38e-16 81.6
Msa0508780 AT3G20140.1 25.714 210 145 4 237 439 268 473 5.12e-16 80.9
Msa0508780 AT5G04630.1 22.567 483 315 14 3 439 7 476 5.48e-16 80.9
Msa0508780 AT4G37330.1 26.697 221 150 4 227 445 250 460 5.54e-16 80.9
Msa0508780 AT3G25180.1 27.143 210 139 5 233 434 267 470 5.67e-16 80.9
Msa0508780 AT3G26300.1 24.057 212 151 4 234 439 256 463 6.16e-16 80.9
Msa0508780 AT3G14690.2 27.099 262 168 8 188 438 272 521 8.23e-16 80.5
Msa0508780 AT3G14690.1 27.099 262 168 8 188 438 237 486 9.35e-16 80.1
Msa0508780 AT2G45580.1 24.609 256 169 5 188 439 239 474 9.76e-16 80.1
Msa0508780 AT1G64940.1 23.222 478 313 16 5 439 11 477 9.92e-16 80.1
Msa0508780 AT3G26230.1 28.249 177 120 4 273 446 300 472 1.28e-15 79.7
Msa0508780 AT5G57220.1 25.316 237 159 6 208 439 229 452 1.36e-15 79.7
Msa0508780 AT4G37340.1 25.159 473 294 23 4 439 8 457 1.58e-15 79.3
Msa0508780 AT4G37360.1 23.848 499 320 18 1 461 5 481 1.67e-15 79.3
Msa0508780 AT3G48300.1 24.222 450 286 17 29 445 31 458 1.95e-15 79.0
Msa0508780 AT3G48300.2 24.222 450 286 17 29 445 33 460 1.96e-15 79.0
Msa0508780 AT4G13310.1 27.778 216 144 6 232 439 252 463 2.30e-15 79.0
Msa0508780 AT2G45560.1 24.413 213 153 4 231 439 265 473 2.49e-15 79.0
Msa0508780 AT2G30750.1 25.830 271 182 9 184 439 196 462 2.90e-15 78.6
Msa0508780 AT4G37320.1 24.545 220 156 3 221 439 247 457 3.36e-15 78.6
Msa0508780 AT4G31940.1 26.389 216 140 6 232 434 272 481 3.82e-15 78.2
Msa0508780 AT3G14680.1 25.794 252 167 7 198 438 244 486 3.98e-15 78.2
Msa0508780 AT3G14640.2 27.615 239 156 7 196 422 257 490 4.18e-15 78.2
Msa0508780 AT3G26290.1 23.585 212 152 4 234 439 256 463 4.37e-15 78.2
Msa0508780 AT3G14640.1 27.615 239 156 7 196 422 235 468 4.41e-15 78.2
Msa0508780 AT3G26290.2 23.585 212 152 4 234 439 269 476 4.56e-15 78.2
Msa0508780 AT5G25130.1 24.590 183 133 3 258 439 281 459 4.64e-15 77.8
Msa0508780 AT3G20940.1 23.839 323 213 7 144 439 162 478 5.11e-15 77.8
Msa0508780 AT5G25180.1 25.980 204 138 5 245 439 260 459 6.56e-15 77.4
Msa0508780 AT2G30770.1 28.191 188 128 5 255 439 279 462 7.38e-15 77.4
Msa0508780 AT4G36220.1 24.868 189 139 1 251 439 296 481 8.05e-15 77.4
Msa0508780 AT4G15110.1 22.896 297 183 8 213 468 289 580 8.16e-15 77.4
Msa0508780 AT3G61040.1 26.961 204 135 5 244 439 265 462 9.75e-15 77.0
Msa0508780 AT3G48310.1 26.941 219 144 6 236 444 248 460 1.51e-14 76.3
Msa0508780 AT2G25160.1 26.522 230 154 6 214 431 251 477 1.60e-14 76.3
Msa0508780 AT2G24180.1 23.950 238 171 4 230 461 258 491 1.67e-14 76.3
Msa0508780 AT3G14630.1 26.860 242 160 7 209 438 246 482 2.11e-14 75.9
Msa0508780 AT4G15380.1 25.943 212 144 3 243 444 270 478 2.16e-14 75.9
Msa0508780 AT2G27000.1 22.143 420 273 11 61 439 69 475 2.26e-14 75.9
Msa0508780 AT1G64950.1 22.807 456 302 13 25 439 30 476 2.94e-14 75.5
Msa0508780 AT1G74540.1 22.944 231 168 5 237 461 253 479 3.28e-14 75.5
Msa0508780 AT3G14620.1 27.778 234 154 7 215 438 261 489 3.46e-14 75.1
Msa0508780 AT5G06905.1 22.288 507 314 18 4 452 8 492 3.51e-14 75.1
Msa0508780 AT1G11610.2 25.439 228 157 6 221 439 239 462 3.55e-14 75.1
Msa0508780 AT5G36220.2 22.747 233 170 3 208 439 94 317 3.75e-14 74.3
Msa0508780 AT3G14630.2 27.119 236 155 7 209 432 301 531 4.06e-14 75.1
Msa0508780 AT1G01190.1 24.138 203 145 4 247 444 306 504 4.80e-14 74.7
Msa0508780 AT2G42250.1 25.000 192 134 2 263 447 299 487 4.92e-14 74.7
Msa0508780 AT1G01190.2 24.138 203 145 4 247 444 311 509 5.07e-14 74.7
Msa0508780 AT4G15360.1 24.291 247 171 7 211 447 241 481 5.25e-14 74.7
Msa0508780 AT5G36220.1 22.747 233 170 3 208 439 240 463 5.56e-14 74.7
Msa0508780 AT1G11610.1 25.439 228 157 6 221 439 239 462 5.94e-14 74.3
Msa0508780 AT2G45570.1 24.044 183 134 3 258 439 296 474 7.11e-14 74.3
Msa0508780 AT4G31970.1 27.103 214 137 7 232 432 271 478 7.48e-14 74.3
Msa0508780 AT5G10610.1 24.873 197 141 3 257 452 282 472 9.17e-14 73.9
Msa0508780 AT5G10600.1 26.768 198 136 4 257 452 298 488 9.35e-14 73.9
Msa0508780 AT3G10560.1 21.109 469 325 10 18 449 37 497 1.53e-13 73.2
Msa0508780 AT1G33730.1 24.747 198 140 5 247 439 144 337 2.26e-13 72.0
Msa0508780 AT1G33730.2 24.747 198 140 5 247 439 144 337 2.26e-13 72.0
Msa0508780 AT3G20960.2 25.561 223 146 5 229 439 262 476 3.04e-13 72.4
Msa0508780 AT3G14610.1 27.027 222 150 5 209 422 249 466 3.14e-13 72.4
Msa0508780 AT3G20960.1 25.561 223 146 5 229 439 159 373 3.81e-13 71.6
Msa0508780 AT4G13290.1 26.728 217 148 6 225 439 249 456 3.96e-13 72.0
Msa0508780 AT5G63450.1 24.907 269 178 9 214 469 248 505 4.26e-13 72.0
Msa0508780 AT5G63450.2 24.907 269 178 9 214 469 306 563 5.66e-13 71.6
Msa0508780 AT3G32047.1 24.752 202 141 3 246 439 276 474 6.34e-13 71.2
Msa0508780 AT3G26180.2 24.528 212 147 6 234 439 129 333 7.07e-13 70.5
Msa0508780 AT1G11680.1 26.471 238 155 6 195 422 212 439 8.81e-13 70.9
Msa0508780 AT1G50520.1 22.924 301 202 6 164 440 187 481 9.04e-13 70.9
Msa0508780 AT1G33720.4 23.558 208 153 4 234 439 138 341 9.52e-13 70.1
Msa0508780 AT1G33720.3 23.558 208 153 4 234 439 138 341 9.52e-13 70.1
Msa0508780 AT1G33720.5 23.558 208 153 4 234 439 138 341 9.52e-13 70.1
Msa0508780 AT4G12300.1 22.727 242 175 5 206 439 240 477 1.09e-12 70.5
Msa0508780 AT1G33720.1 23.558 208 153 4 234 439 270 473 1.22e-12 70.5
Msa0508780 AT3G26180.1 24.528 212 147 6 234 439 263 467 1.34e-12 70.1
Msa0508780 AT5G23190.1 27.488 211 133 7 230 422 286 494 1.47e-12 70.5
Msa0508780 AT3G26330.1 23.497 183 135 3 258 439 285 463 2.37e-12 69.3
Msa0508780 AT5G42590.1 27.103 214 144 6 258 463 283 492 3.07e-12 68.9
Msa0508780 AT1G64930.1 27.368 190 131 4 258 443 295 481 4.23e-12 68.6
Msa0508780 AT2G46660.1 23.913 230 158 5 228 443 275 501 4.24e-12 68.9
Msa0508780 AT3G20935.1 26.012 173 121 2 271 439 134 303 4.24e-12 67.8
Msa0508780 AT5G42580.1 20.420 333 230 7 125 439 147 462 4.31e-12 68.6
Msa0508780 AT3G26220.1 27.374 179 123 4 271 446 301 475 5.31e-12 68.6
Msa0508780 AT4G31500.1 24.194 186 133 5 258 439 283 464 5.87e-12 68.2
Msa0508780 AT3G26150.1 25.373 201 134 5 242 439 280 467 7.11e-12 68.2
Msa0508780 AT3G61880.1 23.048 269 188 6 196 448 241 506 9.09e-12 67.8
Msa0508780 AT3G61880.2 23.048 269 188 6 196 448 241 506 1.20e-11 67.4
Msa0508780 AT4G27710.1 25.000 252 170 6 198 438 248 491 1.27e-11 67.4
Msa0508780 AT5G38450.1 25.455 275 172 8 204 463 244 500 1.74e-11 66.6
Msa0508780 AT2G12190.1 23.667 469 298 15 18 439 23 478 1.89e-11 66.6
Msa0508780 AT5G24900.2 24.074 216 148 6 234 438 170 380 2.01e-11 66.2
Msa0508780 AT5G24900.1 24.074 216 148 6 234 438 287 497 2.81e-11 66.2
Msa0508780 AT1G75130.1 25.545 321 188 12 163 465 215 502 3.49e-11 65.9
Msa0508780 AT5G09970.1 23.162 272 191 9 182 439 237 504 8.12e-11 64.7
Msa0508780 AT4G12320.1 22.430 214 153 4 234 439 271 479 8.31e-11 64.7

Find 150 sgRNAs with CRISPR-Local

Find 545 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATAAATGTTGGGATATTT+TGG 0.113293 3_4:-57009517 None:intergenic
ATAATAAACCGGTTCGTTTC+CGG 0.151778 3_4:-57010013 None:intergenic
TGCTAATTCATCTATTATTA+AGG 0.196854 3_4:+57010162 Msa0508780:CDS
ATGAATGGACTGAGAGTTTA+AGG 0.222206 3_4:+57011866 Msa0508780:CDS
TCATCTACAAATTTCTAAAT+TGG 0.226559 3_4:-57017828 None:intergenic
ACATAATTGGTGCCATATTT+AGG 0.229075 3_4:+57016976 Msa0508780:CDS
TTAAGGGTTGCAAACATAAT+TGG 0.257901 3_4:+57016963 Msa0508780:CDS
TGTGAAGGAAGGAGCATTAA+TGG 0.258022 3_4:-57009610 None:intergenic
TAATAAACCGGTTCGTTTCC+GGG 0.270783 3_4:-57010012 None:intergenic
TCTCTCCGCTTCACTATAAT+AGG 0.278276 3_4:-57017659 None:intergenic
CGAGCATCTTTGAAATGTTC+AGG 0.286050 3_4:-57017191 None:intergenic
ATGTTGGCTTTGCTTGTTGC+TGG 0.310495 3_4:+57012446 Msa0508780:CDS
GGGAATATATTTACACCATT+TGG 0.319952 3_4:+57017362 Msa0508780:CDS
GGTTCAATATCAAACCTTCT+TGG 0.327243 3_4:+57010073 Msa0508780:CDS
AGAAGAAAAGAGAATGAAAT+AGG 0.328042 3_4:+57012344 Msa0508780:CDS
GTGGTAGAGAAAAGAGGAAA+TGG 0.332702 3_4:-57011928 None:intergenic
ACCACAGACATCGACATAAA+AGG 0.338572 3_4:+57017005 Msa0508780:CDS
ACCAGATCATGCATTGGAAT+TGG 0.360123 3_4:+57017689 Msa0508780:CDS
AATTATGTTTGCAACCCTTA+AGG 0.372017 3_4:-57016961 None:intergenic
AGTATATTGAATATTGATAA+TGG 0.379020 3_4:-57009681 None:intergenic
GTCCGAACGGGTTCTTCTCA+TGG 0.389577 3_4:+57010237 Msa0508780:CDS
GCTTGCCAGAGTTGTGCTTT+CGG 0.396662 3_4:+57017415 Msa0508780:CDS
TGTGGTTGTTCTCCTAAATA+TGG 0.396670 3_4:-57016988 None:intergenic
CGGCTACCACCGGGGAGTCT+CGG 0.400324 3_4:+57009845 Msa0508780:CDS
GTCCATTCCAGTGCTGCCTC+TGG 0.406597 3_4:-57016814 None:intergenic
GAGTGAGCCAGAGGCAGCAC+TGG 0.408243 3_4:+57016807 Msa0508780:CDS
TAAAGGTTCATGCACCTTGA+TGG 0.410282 3_4:-57011962 None:intergenic
CGCTGGTCGATGAATGGCTC+TGG 0.410544 3_4:-57009923 None:intergenic
CATGGTAAATATTTCACAAC+AGG 0.412886 3_4:+57017863 Msa0508780:three_prime_UTR
CGGTTTATTATTATGAATGA+AGG 0.415525 3_4:+57010025 Msa0508780:CDS
AAGAAGGTTTGATATTGAAC+CGG 0.424058 3_4:-57010071 None:intergenic
CTTCATTCATAATAATAAAC+CGG 0.425614 3_4:-57010024 None:intergenic
CTTGGAGCATTGTTGGCATC+TGG 0.429471 3_4:+57012389 Msa0508780:CDS
CAGCTGACCCGGAAACGAAC+CGG 0.429948 3_4:+57010005 Msa0508780:CDS
AAACTCTCAGTCCATTCATC+TGG 0.430615 3_4:-57011862 None:intergenic
AGGTTGTGAATGAGACCTTA+AGG 0.431266 3_4:+57016946 Msa0508780:intron
TTGATATAGACCGGCTCATC+CGG 0.433782 3_4:+57010197 Msa0508780:CDS
ACATTCACTGCTTCTTATGA+AGG 0.439604 3_4:+57010099 Msa0508780:CDS
TGGTAGAGAAAAGAGGAAAT+GGG 0.440128 3_4:-57011927 None:intergenic
GGCTACCACCGGGGAGTCTC+GGG 0.440291 3_4:+57009846 Msa0508780:CDS
TTCACTCGCTGGTCGATGAA+TGG 0.447192 3_4:-57009929 None:intergenic
CTGCCATCTCCATGGATTGA+AGG 0.447730 3_4:-57017216 None:intergenic
GAGTACATGCTTGTAATTGA+AGG 0.454086 3_4:+57011892 Msa0508780:CDS
TTTCTTTCTTCTAGGCCATA+GGG 0.456845 3_4:+57009555 Msa0508780:five_prime_UTR
TCCAATTCCAATGCATGATC+TGG 0.457136 3_4:-57017690 None:intergenic
TCTCATGGAGGAGGCTAAGA+AGG 0.457195 3_4:+57010252 Msa0508780:CDS
TCATCGACCAGCGAGTGAAC+CGG 0.463439 3_4:+57009933 Msa0508780:CDS
ATCTTCTCTTTGATATAGAC+CGG 0.466105 3_4:+57010188 Msa0508780:CDS
TTCGGTCTTCCTTCACCGCA+TGG 0.466565 3_4:+57017433 Msa0508780:CDS
CCGGCTCATCCGGCTCAACT+TGG 0.469031 3_4:+57010207 Msa0508780:CDS
CACTGAAACTCCTTTAGCCT+TGG 0.469307 3_4:+57012514 Msa0508780:CDS
AATGGTGTAAATATATTCCC+AGG 0.469818 3_4:-57017359 None:intergenic
ACCGCATGGTCACTCGCATC+AGG 0.472527 3_4:+57017447 Msa0508780:CDS
AATAGGTTACACAATTCCTA+AGG 0.475110 3_4:+57017127 Msa0508780:intron
TCAAATAGTTAACCCTGCCT+TGG 0.476482 3_4:-57017924 None:intergenic
TGACATGCTTGGAGCATTGT+TGG 0.477860 3_4:+57012382 Msa0508780:CDS
AGATGAAGATGATGAAGAAG+AGG 0.479145 3_4:-57009781 None:intergenic
TGATAATGGTAAATATATAG+AGG 0.486978 3_4:-57009667 None:intergenic
TCATAGCCTGGGCACAACCT+TGG 0.488201 3_4:-57017392 None:intergenic
CCAAGTTGAGCCGGATGAGC+CGG 0.490062 3_4:-57010207 None:intergenic
AAGATGCACACGAGTGGGTG+GGG 0.491139 3_4:-57009581 None:intergenic
AGGCACTGACACTAGTAGTC+AGG 0.492217 3_4:+57012318 Msa0508780:CDS
TCAGAAGCTGTAGCAAGCCC+TGG 0.493065 3_4:+57017341 Msa0508780:CDS
CGCGAGACTCCGGCTACCAC+CGG 0.493086 3_4:+57009835 Msa0508780:CDS
AACCTTGGCCCTCCTCCAAA+TGG 0.493369 3_4:-57017377 None:intergenic
CACAATTCCTAAGGGAATGA+AGG 0.493446 3_4:+57017136 Msa0508780:CDS
AATTAAAATACATCCAAGGC+AGG 0.497091 3_4:+57017911 Msa0508780:three_prime_UTR
TTGAGTTGTGCCAAGGCTAA+AGG 0.499630 3_4:-57012524 None:intergenic
AATATATTTACACCATTTGG+AGG 0.503392 3_4:+57017365 Msa0508780:CDS
AGTTTCAGTGAGGAACTTGA+TGG 0.504321 3_4:-57012501 None:intergenic
CGAGACTCCCCGGTGGTAGC+CGG 0.504402 3_4:-57009844 None:intergenic
ATTGGATACACAGCAGATAC+AGG 0.504509 3_4:+57017707 Msa0508780:CDS
AGCCAGAGGCAGCACTGGAA+TGG 0.506599 3_4:+57016812 Msa0508780:CDS
GCAATCACCTTCATTCCCTT+AGG 0.507450 3_4:-57017143 None:intergenic
AGAAGATGCACACGAGTGGG+TGG 0.508321 3_4:-57009583 None:intergenic
AACCGTACCGGTTCACTCGC+TGG 0.513270 3_4:-57009940 None:intergenic
CACCATTTGGAGGAGGGCCA+AGG 0.514754 3_4:+57017375 Msa0508780:CDS
CTCCATGAGAAGAACCCGTT+CGG 0.516192 3_4:-57010239 None:intergenic
TCCTGCTGAAGAAGATAAGC+TGG 0.517024 3_4:+57017601 Msa0508780:CDS
GAAGATGCACACGAGTGGGT+GGG 0.518562 3_4:-57009582 None:intergenic
CATGCACCTTGATGGCTCTA+CGG 0.521828 3_4:-57011954 None:intergenic
AGTACATGCTTGTAATTGAA+GGG 0.521836 3_4:+57011893 Msa0508780:CDS
AGAAGGTTTGATATTGAACC+GGG 0.522320 3_4:-57010070 None:intergenic
ACCAGCTTATCTTCTTCAGC+AGG 0.522674 3_4:-57017602 None:intergenic
CTCTGGCAAGCTCATAGCCT+GGG 0.522962 3_4:-57017403 None:intergenic
GGTTGTGAATGAGACCTTAA+GGG 0.524684 3_4:+57016947 Msa0508780:intron
TTTAGCCTTGGCACAACTCA+AGG 0.526390 3_4:+57012526 Msa0508780:CDS
CACCTACCGTAGAGCCATCA+AGG 0.527437 3_4:+57011948 Msa0508780:CDS
CATTCACTGCTTCTTATGAA+GGG 0.529690 3_4:+57010100 Msa0508780:CDS
GGCAAGAACAAAGGTGGCAG+AGG 0.529896 3_4:+57012298 Msa0508780:intron
CTCTTTGAATGTAGCTACCC+CGG 0.534783 3_4:+57010052 Msa0508780:CDS
AACGGTAACCCGAGACTCCC+CGG 0.537541 3_4:-57009854 None:intergenic
TATTTACACCATTTGGAGGA+GGG 0.542956 3_4:+57017369 Msa0508780:CDS
ATATTTACACCATTTGGAGG+AGG 0.544023 3_4:+57017368 Msa0508780:CDS
GCGAGACTCCGGCTACCACC+GGG 0.545170 3_4:+57009836 Msa0508780:CDS
GTGTGGGAAGAAATAAATGT+TGG 0.545996 3_4:-57009527 None:intergenic
TCATGTACCTGCCATCTCCA+TGG 0.556196 3_4:-57017224 None:intergenic
ATGCTCGCACCTTCAATCCA+TGG 0.558356 3_4:+57017207 Msa0508780:CDS
GAAGACCGAAAGCACAACTC+TGG 0.560961 3_4:-57017420 None:intergenic
GGAGGGCCAAGGTTGTGCCC+AGG 0.564040 3_4:+57017386 Msa0508780:CDS
GTAGCCGGAGTCTCGCGTAC+CGG 0.564384 3_4:-57009829 None:intergenic
TATGGCCTAGAAGAAAGAAA+AGG 0.564947 3_4:-57009552 None:intergenic
ACTCTGGCAAGCTCATAGCC+TGG 0.565407 3_4:-57017404 None:intergenic
TGTAAAGTTTCTCCGATGAA+CGG 0.566007 3_4:-57009872 None:intergenic
AAGGAAGGAGCATTAATGGA+GGG 0.566258 3_4:-57009606 None:intergenic
TGTGGGAAGAAATAAATGTT+GGG 0.569694 3_4:-57009526 None:intergenic
CTCTTCTGCGTCCTAGTGGT+CGG 0.571642 3_4:-57017632 None:intergenic
TGCGAGTGACCATGCGGTGA+AGG 0.572007 3_4:-57017442 None:intergenic
GATAATGGTAAATATATAGA+GGG 0.576583 3_4:-57009666 None:intergenic
TAGTGAAGATTGAACCGTAC+CGG 0.579242 3_4:-57009952 None:intergenic
AAGAGCAAGGAGTGAGCCAG+AGG 0.581010 3_4:+57016798 Msa0508780:CDS
CGGTAGGTGGTAGAGAAAAG+AGG 0.583017 3_4:-57011934 None:intergenic
AACTCCGGTACGCGAGACTC+CGG 0.583397 3_4:+57009825 Msa0508780:CDS
ACGGGTTCTTCTCATGGAGG+AGG 0.587377 3_4:+57010243 Msa0508780:CDS
GAATCTACCAGATCATGCAT+TGG 0.587937 3_4:+57017683 Msa0508780:CDS
CAGAAGCTGTAGCAAGCCCT+GGG 0.589498 3_4:+57017342 Msa0508780:CDS
GAAGAAAGAAAAGGATGTGT+GGG 0.591152 3_4:-57009543 None:intergenic
CTTCAATCCATGGAGATGGC+AGG 0.593024 3_4:+57017217 Msa0508780:CDS
GCACCTTCAATCCATGGAGA+TGG 0.593885 3_4:+57017213 Msa0508780:CDS
CACCTTGATGGCTCTACGGT+AGG 0.594899 3_4:-57011950 None:intergenic
TTAAAGTGTGTGAATTGTGA+AGG 0.600866 3_4:-57009625 None:intergenic
CTTGATGGCTCTACGGTAGG+TGG 0.601855 3_4:-57011947 None:intergenic
ACATAATTAAAATACATCCA+AGG 0.607195 3_4:+57017907 Msa0508780:three_prime_UTR
AGCATGAGCAGATAAGAGCA+AGG 0.608992 3_4:+57016785 Msa0508780:CDS
GACCAGCGAGTGAACCGGTA+CGG 0.610968 3_4:+57009938 Msa0508780:CDS
GAAGGAAGGAGCATTAATGG+AGG 0.611089 3_4:-57009607 None:intergenic
GGGAGAAGATGCACACGAGT+GGG 0.615196 3_4:-57009586 None:intergenic
ACGTACCTTGAGTTGTGCCA+AGG 0.616004 3_4:-57012531 None:intergenic
ATACCTCTTCTGCGTCCTAG+TGG 0.616764 3_4:-57017636 None:intergenic
CGACCACTAGGACGCAGAAG+AGG 0.617435 3_4:+57017633 Msa0508780:CDS
GGTTTATTATTATGAATGAA+GGG 0.619365 3_4:+57010026 Msa0508780:CDS
ATAGGTTACACAATTCCTAA+GGG 0.622597 3_4:+57017128 Msa0508780:intron
AGATGCACACGAGTGGGTGG+GGG 0.623280 3_4:-57009580 None:intergenic
AGTCTCGGGTTACCGTTCAT+CGG 0.629631 3_4:+57009860 Msa0508780:CDS
AGGGAGAAGATGCACACGAG+TGG 0.629756 3_4:-57009587 None:intergenic
AGTGTGTGAATTGTGAAGGA+AGG 0.630058 3_4:-57009621 None:intergenic
AGAAGAAAGAAAAGGATGTG+TGG 0.630540 3_4:-57009544 None:intergenic
ATTAAAATACATCCAAGGCA+GGG 0.634839 3_4:+57017912 Msa0508780:three_prime_UTR
TCTTCCTCCTCAGAAAACTC+CGG 0.635365 3_4:+57009810 Msa0508780:CDS
AGATGATCAATATGTTGTCA+TGG 0.639282 3_4:+57017845 Msa0508780:three_prime_UTR
GGTATCCTATTATAGTGAAG+CGG 0.645476 3_4:+57017654 Msa0508780:CDS
ATGGTGTAAATATATTCCCA+GGG 0.656990 3_4:-57017358 None:intergenic
CGAACGGGTTCTTCTCATGG+AGG 0.671283 3_4:+57010240 Msa0508780:CDS
GATACACAGCAGATACAGGA+AGG 0.676914 3_4:+57017711 Msa0508780:CDS
TGGTGAACAGTTCTCAGACG+AGG 0.693804 3_4:+57012409 Msa0508780:CDS
ACCTGATGCGAGTGACCATG+CGG 0.719631 3_4:-57017448 None:intergenic
AGGCTAAAGGAGTTTCAGTG+AGG 0.745249 3_4:-57012511 None:intergenic
GAAGGTTTGATATTGAACCG+GGG 0.751716 3_4:-57010069 None:intergenic
CGAGACTCCGGCTACCACCG+GGG 0.777490 3_4:+57009837 Msa0508780:CDS
GGTAACCCGAGACTCCCCGG+TGG 0.824883 3_4:-57009851 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAATAAAATAAAATAA+AGG - chr3_4:57011982-57012001 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG - chr3_4:57012965-57012984 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG + chr3_4:57012964-57012983 Msa0508780:intron 0.0%
!! TATATATATATATATATATA+GGG + chr3_4:57012965-57012984 Msa0508780:intron 0.0%
!! ATATATATATATATATATAT+GGG - chr3_4:57012964-57012983 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG - chr3_4:57012965-57012984 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG + chr3_4:57012965-57012984 Msa0508780:intron 0.0%
!! ATATATATATATATATATAT+GGG + chr3_4:57012964-57012983 Msa0508780:intron 0.0%
!! TATATATATATATATATATA+GGG - chr3_4:57012965-57012984 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG - chr3_4:57012964-57012983 None:intergenic 0.0%
!!! TTATTTATTTTTTAATTTAT+AGG + chr3_4:57013934-57013953 Msa0508780:intron 0.0%
!!! TATTTTCTTGTAAAAAAAAA+AGG - chr3_4:57010389-57010408 None:intergenic 10.0%
!!! AGTTAAACAAAATTTTTATT+AGG - chr3_4:57010584-57010603 None:intergenic 10.0%
!!! AACTATATTCAAATTTTAAA+CGG + chr3_4:57012072-57012091 Msa0508780:intron 10.0%
!!! ATATGTAATTTGATATTTTT+AGG + chr3_4:57012277-57012296 Msa0508780:intron 10.0%
!! TTCTATATATAAGAAAAAAT+TGG + chr3_4:57012588-57012607 Msa0508780:intron 10.0%
!! CAAAAAATATATATTTAACA+TGG - chr3_4:57013675-57013694 None:intergenic 10.0%
!! TCTATTTATAAAAGAAATTT+AGG - chr3_4:57013870-57013889 None:intergenic 10.0%
!! ATAATTACTAGTAAATTAAA+AGG + chr3_4:57014841-57014860 Msa0508780:intron 10.0%
!! AGTATATTATAAATTGTATT+TGG - chr3_4:57016236-57016255 None:intergenic 10.0%
!! TATAAGAAAATAAAAATGTA+TGG + chr3_4:57017031-57017050 Msa0508780:intron 10.0%
!! AGTATATTGAATATTGATAA+TGG - chr3_4:57009684-57009703 None:intergenic 15.0%
!!! TTTTTAGAAGTATATTTCAA+TGG + chr3_4:57009751-57009770 Msa0508780:exon 15.0%
!!! ATTTATGTTATATTTTTTGG+TGG + chr3_4:57010408-57010427 Msa0508780:intron 15.0%
!!! TTTATTCATTTTTTATCATC+TGG + chr3_4:57010764-57010783 Msa0508780:intron 15.0%
!! AAATTAATATTATTATAGCG+TGG + chr3_4:57011062-57011081 Msa0508780:intron 15.0%
!!! TAAACATTTTTAGCAATTAA+GGG - chr3_4:57011627-57011646 None:intergenic 15.0%
!! CATATTTATTAAACTCATAA+AGG - chr3_4:57012009-57012028 None:intergenic 15.0%
!!! ACTATATTCAAATTTTAAAC+GGG + chr3_4:57012073-57012092 Msa0508780:intron 15.0%
!!! AAGTTTTTTTACACTTTTTT+TGG - chr3_4:57012144-57012163 None:intergenic 15.0%
!! ATAGATATATGAAATATGAT+TGG + chr3_4:57012191-57012210 Msa0508780:intron 15.0%
!!! TTTTTTCTTATATATAGAAC+CGG - chr3_4:57012587-57012606 None:intergenic 15.0%
!!! CAAATATATCAATTTTTGTT+AGG - chr3_4:57013811-57013830 None:intergenic 15.0%
!! CTAACAAAAATTGATATATT+TGG + chr3_4:57013809-57013828 Msa0508780:intron 15.0%
!!! ATTTCTTTTATAAATAGAAC+CGG + chr3_4:57013872-57013891 Msa0508780:intron 15.0%
!! AAGTATAGCTATTAAAATTA+TGG + chr3_4:57014042-57014061 Msa0508780:intron 15.0%
!! TTAAAATTATGGAAAATGAT+AGG + chr3_4:57014053-57014072 Msa0508780:intron 15.0%
!! TTTGAACAAATGTTTATAAA+TGG + chr3_4:57016164-57016183 Msa0508780:intron 15.0%
!! TTGAACAAATGTTTATAAAT+GGG + chr3_4:57016165-57016184 Msa0508780:intron 15.0%
!!! TAAGAAAATATTCCTTTTTT+AGG + chr3_4:57016273-57016292 Msa0508780:intron 15.0%
!! TTATTCAATGAATCTAAAAA+AGG + chr3_4:57016347-57016366 Msa0508780:intron 15.0%
!!! ACATTGTAATTTTTTTTACA+CGG - chr3_4:57016694-57016713 None:intergenic 15.0%
!!! AAATAAATGTTGGGATATTT+TGG - chr3_4:57009520-57009539 None:intergenic 20.0%
!!! GATAATGGTAAATATATAGA+GGG - chr3_4:57009669-57009688 None:intergenic 20.0%
!!! TGATAATGGTAAATATATAG+AGG - chr3_4:57009670-57009689 None:intergenic 20.0%
!!! CTTCTAAAAAAGTATAGTAT+AGG - chr3_4:57009741-57009760 None:intergenic 20.0%
!! CTTCATTCATAATAATAAAC+CGG - chr3_4:57010027-57010046 None:intergenic 20.0%
!! GGTTTATTATTATGAATGAA+GGG + chr3_4:57010026-57010045 Msa0508780:CDS 20.0%
!! TGCTAATTCATCTATTATTA+AGG + chr3_4:57010162-57010181 Msa0508780:CDS 20.0%
!!! TAAGTTTTCACCAAAAAAAT+TGG - chr3_4:57010340-57010359 None:intergenic 20.0%
!!! AATTTTTTTGGTGAAAACTT+AGG + chr3_4:57010339-57010358 Msa0508780:intron 20.0%
!!! ATTTTTTTGGTGAAAACTTA+GGG + chr3_4:57010340-57010359 Msa0508780:intron 20.0%
!!! ACTTAATGCTTTGATAATTT+AGG - chr3_4:57010609-57010628 None:intergenic 20.0%
!!! TAGTATGACATAAACTTTTT+TGG + chr3_4:57010880-57010899 Msa0508780:intron 20.0%
!!! TAAAATGAGTGTAAACTTTT+TGG + chr3_4:57010908-57010927 Msa0508780:intron 20.0%
!!! ATATTTTTTCTCTGTATCAA+TGG + chr3_4:57011117-57011136 Msa0508780:intron 20.0%
!! CATTCTGAATATAAAACTTT+AGG + chr3_4:57011406-57011425 Msa0508780:intron 20.0%
!! AAAGACATGTTTAAAAAAGA+AGG + chr3_4:57011472-57011491 Msa0508780:intron 20.0%
!! AAGACATGTTTAAAAAAGAA+GGG + chr3_4:57011473-57011492 Msa0508780:intron 20.0%
!!! CTAAACATTTTTAGCAATTA+AGG - chr3_4:57011628-57011647 None:intergenic 20.0%
!! CTTAATTGCTAAAAATGTTT+AGG + chr3_4:57011626-57011645 Msa0508780:intron 20.0%
!!! TTTTATTTCTTTTTCTCTCA+AGG - chr3_4:57011685-57011704 None:intergenic 20.0%
!! TTTCAACCTATATATATAGT+CGG - chr3_4:57011750-57011769 None:intergenic 20.0%
!!! TTTCATTTTGTTTGTGTTAA+TGG + chr3_4:57012660-57012679 Msa0508780:intron 20.0%
!!! AACAAAGACTATTTTAATTG+AGG + chr3_4:57012703-57012722 Msa0508780:intron 20.0%
!!! ATTTTAATTGAGGACAAATT+AGG + chr3_4:57012713-57012732 Msa0508780:intron 20.0%
!!! TTTTAATTGAGGACAAATTA+GGG + chr3_4:57012714-57012733 Msa0508780:intron 20.0%
!! TTCCATGAAATGATTTAAAT+TGG + chr3_4:57012884-57012903 Msa0508780:intron 20.0%
!! TCCATGAAATGATTTAAATT+GGG + chr3_4:57012885-57012904 Msa0508780:intron 20.0%
!! TATATATATATGGACATTTG+TGG - chr3_4:57012955-57012974 None:intergenic 20.0%
!! AAGTTAATAAATACACCTTA+AGG - chr3_4:57013211-57013230 None:intergenic 20.0%
!!! ATATCAATTTTTGTTAGGAT+CGG - chr3_4:57013806-57013825 None:intergenic 20.0%
!! CCTACAAATTAATAATTTCA+GGG - chr3_4:57014266-57014285 None:intergenic 20.0%
!! TCCTACAAATTAATAATTTC+AGG - chr3_4:57014267-57014286 None:intergenic 20.0%
!!! ATTAATTTGTAGGATTTTGT+AGG + chr3_4:57014273-57014292 Msa0508780:intron 20.0%
!!! ACAAAGAAAGTCAAATTTTA+CGG - chr3_4:57014774-57014793 None:intergenic 20.0%
!!! ATACAACATACGTTTTAATT+TGG - chr3_4:57015661-57015680 None:intergenic 20.0%
!! TGAACAAATGTTTATAAATG+GGG + chr3_4:57016166-57016185 Msa0508780:intron 20.0%
!!! AATTTTGGATAATGTAATTG+TGG - chr3_4:57016626-57016645 None:intergenic 20.0%
!!! TGTAGAATATGATTGAATTT+TGG - chr3_4:57016641-57016660 None:intergenic 20.0%
!! TCATCTACAAATTTCTAAAT+TGG - chr3_4:57017831-57017850 None:intergenic 20.0%
!! ACATAATTAAAATACATCCA+AGG + chr3_4:57017907-57017926 Msa0508780:three_prime_UTR 20.0%
! CGGTTTATTATTATGAATGA+AGG + chr3_4:57010025-57010044 Msa0508780:CDS 25.0%
!!! TTTTTTTGGTGAAAACTTAG+GGG + chr3_4:57010341-57010360 Msa0508780:intron 25.0%
!!! TATGTTATATTTTTTGGTGG+TGG + chr3_4:57010411-57010430 Msa0508780:intron 25.0%
! GAATAAATTATAGAGAAAGC+TGG - chr3_4:57010751-57010770 None:intergenic 25.0%
!! AGTAATGTATTGATATGTGT+TGG + chr3_4:57011248-57011267 Msa0508780:intron 25.0%
! TCACGTTAATATAACTGAAA+AGG + chr3_4:57011358-57011377 Msa0508780:intron 25.0%
! AGACATGTTTAAAAAAGAAG+GGG + chr3_4:57011474-57011493 Msa0508780:intron 25.0%
!!! GCTTTTTTTTTTTTGGTTGT+CGG + chr3_4:57011496-57011515 Msa0508780:intron 25.0%
!!! CTTTTTTTTTTTTGGTTGTC+GGG + chr3_4:57011497-57011516 Msa0508780:intron 25.0%
!!! TTTTTTTTTTTTGGTTGTCG+GGG + chr3_4:57011498-57011517 Msa0508780:intron 25.0%
! GACAATACATAATATATGCA+AGG - chr3_4:57011537-57011556 None:intergenic 25.0%
!!! ATATTTTTAGGCAAGAACAA+AGG + chr3_4:57012289-57012308 Msa0508780:intron 25.0%
! AGAAGAAAAGAGAATGAAAT+AGG + chr3_4:57012344-57012363 Msa0508780:CDS 25.0%
!!! GGAAATAGTTGATTTTATGT+TGG + chr3_4:57012430-57012449 Msa0508780:CDS 25.0%
! AGAAAAAATTGGATCAGTAA+AGG + chr3_4:57012599-57012618 Msa0508780:intron 25.0%
!!! CATCTTGTTTACTTTTCATT+TGG + chr3_4:57012813-57012832 Msa0508780:intron 25.0%
! ACCCAATTTAAATCATTTCA+TGG - chr3_4:57012889-57012908 None:intergenic 25.0%
! GCAAATGAATAACTAAAAAG+TGG - chr3_4:57013079-57013098 None:intergenic 25.0%
! TCAACAAAAGTTAATGAATC+TGG - chr3_4:57013847-57013866 None:intergenic 25.0%
! TTTGTGTGAATTAGTGAATA+GGG - chr3_4:57014012-57014031 None:intergenic 25.0%
!! TTTTGTGTGAATTAGTGAAT+AGG - chr3_4:57014013-57014032 None:intergenic 25.0%
!!! CCCTGAAATTATTAATTTGT+AGG + chr3_4:57014263-57014282 Msa0508780:intron 25.0%
! CTGTTACAAAACAAACTTAA+AGG - chr3_4:57015526-57015545 None:intergenic 25.0%
!!! AAGTTTGTTTTGTAACAGAT+AGG + chr3_4:57014918-57014937 Msa0508780:intron 25.0%
! GTTACAAACATCAAACTTAA+AGG - chr3_4:57014945-57014964 None:intergenic 25.0%
! GTTTGATGTTTGTAACATAT+AGG + chr3_4:57014949-57014968 Msa0508780:intron 25.0%
! CTGTTACAAAACAAACTTAA+AGG - chr3_4:57015526-57015545 None:intergenic 25.0%
!!! AAGTTTGTTTTGTAACAGAT+AGG + chr3_4:57014918-57014937 Msa0508780:intron 25.0%
! CTGATTCTTCAAAAAAAACT+GGG - chr3_4:57015109-57015128 None:intergenic 25.0%
! GAGTTGAGTATATTTATCAT+CGG - chr3_4:57015254-57015273 None:intergenic 25.0%
!! AGCTTTGGTATGAATAAAAA+TGG + chr3_4:57015365-57015384 Msa0508780:intron 25.0%
! TATGAATAAAAATGGAGTCA+GGG + chr3_4:57015373-57015392 Msa0508780:intron 25.0%
!!! AAGTTTGTTTTGTAACAGAT+AGG - chr3_4:57014918-57014937 None:intergenic 25.0%
! CTGTTACAAAACAAACTTAA+AGG + chr3_4:57015526-57015545 Msa0508780:intron 25.0%
!!! AAGTTTGTTTTGTAACAGAT+AGG - chr3_4:57014918-57014937 None:intergenic 25.0%
! CTGTTACAAAACAAACTTAA+AGG + chr3_4:57015526-57015545 Msa0508780:intron 25.0%
! ACATAAATTGTATCTTCATG+TGG + chr3_4:57015734-57015753 Msa0508780:intron 25.0%
! CATAAAAATTATAGAGACAG+TGG + chr3_4:57015781-57015800 Msa0508780:intron 25.0%
!! TATTTTCGTCTTTAATCACA+CGG - chr3_4:57015880-57015899 None:intergenic 25.0%
! TGTGCAAAATTTATTCTCTT+TGG + chr3_4:57015919-57015938 Msa0508780:intron 25.0%
!! TCTAATTTCGATGACTATTT+TGG + chr3_4:57015987-57016006 Msa0508780:intron 25.0%
!! TTTTGAACCTTCCAATATTA+TGG + chr3_4:57016099-57016118 Msa0508780:intron 25.0%
! AATTTATAATATACTCCCTC+TGG + chr3_4:57016241-57016260 Msa0508780:intron 25.0%
!!! TTTGAATTGTGTTATTTGAC+AGG + chr3_4:57016759-57016778 Msa0508780:intron 25.0%
! AATGCGTAAGTATATAATAC+AGG + chr3_4:57016863-57016882 Msa0508780:intron 25.0%
! AATATATTTACACCATTTGG+AGG + chr3_4:57017365-57017384 Msa0508780:CDS 25.0%
!!! TAAAAGCATTTTGCATGTTA+AGG + chr3_4:57017470-57017489 Msa0508780:intron 25.0%
! ATGTTTGGATTTCAATTCAA+TGG + chr3_4:57017569-57017588 Msa0508780:intron 25.0%
TGTGGGAAGAAATAAATGTT+GGG - chr3_4:57009529-57009548 None:intergenic 30.0%
TTAAAGTGTGTGAATTGTGA+AGG - chr3_4:57009628-57009647 None:intergenic 30.0%
AAGAAGGTTTGATATTGAAC+CGG - chr3_4:57010074-57010093 None:intergenic 30.0%
ATCTTCTCTTTGATATAGAC+CGG + chr3_4:57010188-57010207 Msa0508780:CDS 30.0%
!!! ATACTACCAGCCAATTTTTT+TGG + chr3_4:57010327-57010346 Msa0508780:intron 30.0%
! TTTTCACCAAAAAAATTGGC+TGG - chr3_4:57010336-57010355 None:intergenic 30.0%
ACAATGCATAATCTATGCAA+AGG - chr3_4:57010456-57010475 None:intergenic 30.0%
TTGCCATCATTATGTCATAT+GGG + chr3_4:57010693-57010712 Msa0508780:intron 30.0%
TTCAAATCTAGTTAGACACT+TGG - chr3_4:57010843-57010862 None:intergenic 30.0%
TTGAAGTCTCTCTATTAAGT+TGG + chr3_4:57011179-57011198 Msa0508780:intron 30.0%
TGAAGTCTCTCTATTAAGTT+GGG + chr3_4:57011180-57011199 Msa0508780:intron 30.0%
AGTTATATTAACGTGATGCA+AGG - chr3_4:57011354-57011373 None:intergenic 30.0%
!!! AGAAGGGGCTTTTTTTTTTT+TGG + chr3_4:57011489-57011508 Msa0508780:intron 30.0%
!! CTCAAGGTATCTATTGTTTT+AGG - chr3_4:57011669-57011688 None:intergenic 30.0%
AGTACATGCTTGTAATTGAA+GGG + chr3_4:57011893-57011912 Msa0508780:CDS 30.0%
CAATATCATATTTGTTCGAG+TGG + chr3_4:57012049-57012068 Msa0508780:intron 30.0%
CATACTTGTGTAAATGTGAT+TGG + chr3_4:57012105-57012124 Msa0508780:intron 30.0%
ACAATATCTTCTATTAGCTC+CGG + chr3_4:57012565-57012584 Msa0508780:intron 30.0%
! GATCCTATTCAAGTTCATTA+AGG + chr3_4:57012738-57012757 Msa0508780:intron 30.0%
GTTCCTTAATGAACTTGAAT+AGG - chr3_4:57012744-57012763 None:intergenic 30.0%
TTTAGATTAGTAAGACCGTA+TGG + chr3_4:57012908-57012927 Msa0508780:intron 30.0%
TATATATGGACATTTGTGGT+GGG - chr3_4:57012951-57012970 None:intergenic 30.0%
ATATATATGGACATTTGTGG+TGG - chr3_4:57012952-57012971 None:intergenic 30.0%
! TACTCCTTCTAAAAAGTAAG+TGG + chr3_4:57013104-57013123 Msa0508780:intron 30.0%
! ACTCCTTCTAAAAAGTAAGT+GGG + chr3_4:57013105-57013124 Msa0508780:intron 30.0%
ACCTTCTAACAAAAACAAGT+GGG - chr3_4:57013170-57013189 None:intergenic 30.0%
TTATAGCAACATACACCTTA+AGG + chr3_4:57013193-57013212 Msa0508780:intron 30.0%
ATAAAAGACACCTTCACAAA+AGG - chr3_4:57013347-57013366 None:intergenic 30.0%
!!! ACACCAACTACTTTTTATGA+AGG + chr3_4:57013396-57013415 Msa0508780:intron 30.0%
ACACCTTCATAAAAAGTAGT+TGG - chr3_4:57013402-57013421 None:intergenic 30.0%
GACAATGCATAATATATGCA+AGG - chr3_4:57013751-57013770 None:intergenic 30.0%
!! TGAATTAGTGTTACTTTCTC+CGG - chr3_4:57013894-57013913 None:intergenic 30.0%
CTTAGGACACAAATAATCTT+AGG - chr3_4:57014230-57014249 None:intergenic 30.0%
AAGATTCGTTTCAAAACTTG+TGG + chr3_4:57014409-57014428 Msa0508780:intron 30.0%
TGATGACAAGAAAAATTGAC+TGG - chr3_4:57014633-57014652 None:intergenic 30.0%
TCTTTAGATTGAGCATGTTT+AGG - chr3_4:57014723-57014742 None:intergenic 30.0%
GTTACAAACGTCAAACTTAA+AGG - chr3_4:57015557-57015576 None:intergenic 30.0%
GTTTGACGTTTGTAACATAT+AGG + chr3_4:57014889-57014908 Msa0508780:intron 30.0%
AAAAAAACTGGGTGTAGTAA+AGG - chr3_4:57015098-57015117 None:intergenic 30.0%
CCTGATTCTTCAAAAAAAAC+TGG - chr3_4:57015110-57015129 None:intergenic 30.0%
!!! CCAGTTTTTTTTGAAGAATC+AGG + chr3_4:57015107-57015126 Msa0508780:intron 30.0%
AATAATGCTGGTATTACACT+TGG + chr3_4:57015319-57015338 Msa0508780:intron 30.0%
GTATGAATAAAAATGGAGTC+AGG + chr3_4:57015372-57015391 Msa0508780:intron 30.0%
GTTACAAACGTCAAACTTAA+AGG + chr3_4:57015557-57015576 Msa0508780:intron 30.0%
GTTTGACGTTTGTAACATAT+AGG - chr3_4:57014889-57014908 None:intergenic 30.0%
GTTACAAACGTCAAACTTAA+AGG + chr3_4:57015557-57015576 Msa0508780:intron 30.0%
! TAAATTTTGCACAAAGTGCA+TGG - chr3_4:57015912-57015931 None:intergenic 30.0%
GAAGGTTCAAAATGATCTAT+GGG - chr3_4:57016091-57016110 None:intergenic 30.0%
CATAGAGTACACCATAATAT+TGG - chr3_4:57016113-57016132 None:intergenic 30.0%
CAAAAACGACTTAAAAAGTG+AGG - chr3_4:57016197-57016216 None:intergenic 30.0%
! TTCTTATATTTGAGACCAGA+GGG - chr3_4:57016378-57016397 None:intergenic 30.0%
! TTTCTTATATTTGAGACCAG+AGG - chr3_4:57016377-57016396 None:intergenic 30.0%
CTACTCAATGAACCTAAAAA+AGG - chr3_4:57016288-57016307 None:intergenic 30.0%
CATTGAGTAGTTAATGTATC+TGG + chr3_4:57016298-57016317 Msa0508780:intron 30.0%
! TTTCTTATATTTGAGACCAG+AGG + chr3_4:57016377-57016396 Msa0508780:intron 30.0%
! TTCTTATATTTGAGACCAGA+GGG + chr3_4:57016378-57016397 Msa0508780:intron 30.0%
!!! TAGTTTTAGAAATCGTGGTT+GGG - chr3_4:57016584-57016603 None:intergenic 30.0%
!!! ATAGTTTTAGAAATCGTGGT+TGG - chr3_4:57016585-57016604 None:intergenic 30.0%
!!! GCATATAGTTTTAGAAATCG+TGG - chr3_4:57016589-57016608 None:intergenic 30.0%
! GATTAAAAGTATAGTGTCAC+AGG - chr3_4:57016902-57016921 None:intergenic 30.0%
TTAATCAATGCATAACCGAT+TGG + chr3_4:57016916-57016935 Msa0508780:intron 30.0%
TAATCAATGCATAACCGATT+GGG + chr3_4:57016917-57016936 Msa0508780:intron 30.0%
AATTATGTTTGCAACCCTTA+AGG - chr3_4:57016964-57016983 None:intergenic 30.0%
TTAAGGGTTGCAAACATAAT+TGG + chr3_4:57016963-57016982 Msa0508780:CDS 30.0%
!! ACATAATTGGTGCCATATTT+AGG + chr3_4:57016976-57016995 Msa0508780:CDS 30.0%
TAACCTATTATTGCAAAGTC+GGG - chr3_4:57017116-57017135 None:intergenic 30.0%
GTAACCTATTATTGCAAAGT+CGG - chr3_4:57017117-57017136 None:intergenic 30.0%
AATAGGTTACACAATTCCTA+AGG + chr3_4:57017127-57017146 Msa0508780:intron 30.0%
ATAGGTTACACAATTCCTAA+GGG + chr3_4:57017128-57017147 Msa0508780:intron 30.0%
ATGGTGTAAATATATTCCCA+GGG - chr3_4:57017361-57017380 None:intergenic 30.0%
AATGGTGTAAATATATTCCC+AGG - chr3_4:57017362-57017381 None:intergenic 30.0%
GGGAATATATTTACACCATT+TGG + chr3_4:57017362-57017381 Msa0508780:CDS 30.0%
TTTCTTAAGTCGCTAATGTT+TGG + chr3_4:57017554-57017573 Msa0508780:intron 30.0%
ATTTCAATTCAATGGCAGTT+GGG + chr3_4:57017577-57017596 Msa0508780:intron 30.0%
AGATGATCAATATGTTGTCA+TGG + chr3_4:57017845-57017864 Msa0508780:three_prime_UTR 30.0%
CATGGTAAATATTTCACAAC+AGG + chr3_4:57017863-57017882 Msa0508780:three_prime_UTR 30.0%
AATTAAAATACATCCAAGGC+AGG + chr3_4:57017911-57017930 Msa0508780:three_prime_UTR 30.0%
ATTAAAATACATCCAAGGCA+GGG + chr3_4:57017912-57017931 Msa0508780:three_prime_UTR 30.0%
GTGTGGGAAGAAATAAATGT+TGG - chr3_4:57009530-57009549 None:intergenic 35.0%
GAAGAAAGAAAAGGATGTGT+GGG - chr3_4:57009546-57009565 None:intergenic 35.0%
AGAAGAAAGAAAAGGATGTG+TGG - chr3_4:57009547-57009566 None:intergenic 35.0%
! CACATCCTTTTCTTTCTTCT+AGG + chr3_4:57009547-57009566 Msa0508780:five_prime_UTR 35.0%
TATGGCCTAGAAGAAAGAAA+AGG - chr3_4:57009555-57009574 None:intergenic 35.0%
! TTTTCTTTCTTCTAGGCCAT+AGG + chr3_4:57009554-57009573 Msa0508780:five_prime_UTR 35.0%
TTTCTTTCTTCTAGGCCATA+GGG + chr3_4:57009555-57009574 Msa0508780:five_prime_UTR 35.0%
AGATGAAGATGATGAAGAAG+AGG - chr3_4:57009784-57009803 None:intergenic 35.0%
TGTAAAGTTTCTCCGATGAA+CGG - chr3_4:57009875-57009894 None:intergenic 35.0%
! ATCTTCACTAGCCATGTTTT+TGG + chr3_4:57009965-57009984 Msa0508780:CDS 35.0%
!! ATAATAAACCGGTTCGTTTC+CGG - chr3_4:57010016-57010035 None:intergenic 35.0%
AGAAGGTTTGATATTGAACC+GGG - chr3_4:57010073-57010092 None:intergenic 35.0%
GGTTCAATATCAAACCTTCT+TGG + chr3_4:57010073-57010092 Msa0508780:CDS 35.0%
ACATTCACTGCTTCTTATGA+AGG + chr3_4:57010099-57010118 Msa0508780:CDS 35.0%
CATTCACTGCTTCTTATGAA+GGG + chr3_4:57010100-57010119 Msa0508780:CDS 35.0%
!!! GTGAAAACTTAGGGGTTTTT+TGG + chr3_4:57010349-57010368 Msa0508780:intron 35.0%
!!! TTATATTTTTTGGTGGTGGC+CGG + chr3_4:57010415-57010434 Msa0508780:intron 35.0%
TCATGTGTAGTGAGTTTACT+CGG + chr3_4:57010636-57010655 Msa0508780:intron 35.0%
CTTGCCATCATTATGTCATA+TGG + chr3_4:57010692-57010711 Msa0508780:intron 35.0%
CAACCCATATGACATAATGA+TGG - chr3_4:57010699-57010718 None:intergenic 35.0%
! ATTATGTCATATGGGTTGTG+TGG + chr3_4:57010701-57010720 Msa0508780:intron 35.0%
! TTATGTCATATGGGTTGTGT+GGG + chr3_4:57010702-57010721 Msa0508780:intron 35.0%
AAATGATGACTCAGATTCCA+TGG + chr3_4:57011293-57011312 Msa0508780:intron 35.0%
AGGATTATGTGCAAGTGAAT+TGG - chr3_4:57011334-57011353 None:intergenic 35.0%
! AAAAGGTTTTCCTGCTACAA+GGG + chr3_4:57011375-57011394 Msa0508780:intron 35.0%
ACTTTAGGTCATCATCATAG+AGG + chr3_4:57011421-57011440 Msa0508780:intron 35.0%
AGGTGTCCGACTATATATAT+AGG + chr3_4:57011741-57011760 Msa0508780:intron 35.0%
!! TGAGTTTTGATCCAGATGAA+TGG + chr3_4:57011851-57011870 Msa0508780:CDS 35.0%
!! ATGAATGGACTGAGAGTTTA+AGG + chr3_4:57011866-57011885 Msa0508780:CDS 35.0%
GAGTACATGCTTGTAATTGA+AGG + chr3_4:57011892-57011911 Msa0508780:CDS 35.0%
TGGTAGAGAAAAGAGGAAAT+GGG - chr3_4:57011930-57011949 None:intergenic 35.0%
CTTGTGTAAATGTGATTGGA+AGG + chr3_4:57012109-57012128 Msa0508780:intron 35.0%
!! TTTTTAGGCAAGAACAAAGG+TGG + chr3_4:57012292-57012311 Msa0508780:intron 35.0%
GAGAAAAAGAATGACATGCT+TGG + chr3_4:57012371-57012390 Msa0508780:CDS 35.0%
GGAGCTAATAGAAGATATTG+TGG - chr3_4:57012566-57012585 None:intergenic 35.0%
ATCAGTAAAGGTCGATGTAT+CGG + chr3_4:57012611-57012630 Msa0508780:intron 35.0%
AAGGAACTTAATACCCTACA+TGG + chr3_4:57012757-57012776 Msa0508780:intron 35.0%
AGCTATTAAGTGTCCATGTA+GGG - chr3_4:57012773-57012792 None:intergenic 35.0%
TAGCTATTAAGTGTCCATGT+AGG - chr3_4:57012774-57012793 None:intergenic 35.0%
! TTTTACAACCCACAACCATA+CGG - chr3_4:57012926-57012945 None:intergenic 35.0%
ATATATGGACATTTGTGGTG+GGG - chr3_4:57012950-57012969 None:intergenic 35.0%
!!! ACACCCACTAGTTTTTATGT+GGG + chr3_4:57013016-57013035 Msa0508780:intron 35.0%
ACTCCCACATAAAAACTAGT+GGG - chr3_4:57013253-57013272 None:intergenic 35.0%
! TTTTAGCAAAGCTACACCTT+AGG + chr3_4:57013043-57013062 Msa0508780:intron 35.0%
TTTAGCAAAGCTACACCTTA+GGG + chr3_4:57013044-57013063 Msa0508780:intron 35.0%
AAGTGGTTAAATACACCCTA+AGG - chr3_4:57013062-57013081 None:intergenic 35.0%
!!! ACACCCACTTACTTTTTAGA+AGG - chr3_4:57013111-57013130 None:intergenic 35.0%
TGTTCTAGCAAATCCTATAG+GGG - chr3_4:57013145-57013164 None:intergenic 35.0%
GTGTTCTAGCAAATCCTATA+GGG - chr3_4:57013146-57013165 None:intergenic 35.0%
TGTGTTCTAGCAAATCCTAT+AGG - chr3_4:57013147-57013166 None:intergenic 35.0%
!!! ACCCACTTGTTTTTGTTAGA+AGG + chr3_4:57013166-57013185 Msa0508780:intron 35.0%
CACCTTCTAACAAAAACAAG+TGG - chr3_4:57013171-57013190 None:intergenic 35.0%
ACTCCCACATAAAAACTAGT+GGG + chr3_4:57013253-57013272 Msa0508780:intron 35.0%
!!! ACACCCACTAGTTTTTATGT+GGG - chr3_4:57013016-57013035 None:intergenic 35.0%
! ATAGAAGACACCTTTTGTGA+AGG + chr3_4:57013334-57013353 Msa0508780:intron 35.0%
AAAGTGAAAATCACACCTTG+AGG + chr3_4:57013445-57013464 Msa0508780:intron 35.0%
! TTTTATCAAGTCACACCTCA+AGG - chr3_4:57013463-57013482 None:intergenic 35.0%
!!! CACCACACTACTTTTTATGA+AGG + chr3_4:57013485-57013504 Msa0508780:intron 35.0%
CACCTTCATAAAAAGTAGTG+TGG - chr3_4:57013490-57013509 None:intergenic 35.0%
CATAATATATGCAAGGTCTG+GGG - chr3_4:57013744-57013763 None:intergenic 35.0%
GCATAATATATGCAAGGTCT+GGG - chr3_4:57013745-57013764 None:intergenic 35.0%
TGCATAATATATGCAAGGTC+TGG - chr3_4:57013746-57013765 None:intergenic 35.0%
! CAATTTTTGTTAGGATCGGA+GGG - chr3_4:57013802-57013821 None:intergenic 35.0%
! TCAATTTTTGTTAGGATCGG+AGG - chr3_4:57013803-57013822 None:intergenic 35.0%
ACGCATGAAATCATATGTGT+CGG + chr3_4:57014688-57014707 Msa0508780:intron 35.0%
!! GAAATCATATGTGTCGGTTT+CGG + chr3_4:57014694-57014713 Msa0508780:intron 35.0%
! AAAGAGTGTATGTGCTTCAT+AGG + chr3_4:57014738-57014757 Msa0508780:intron 35.0%
AAAAGGCTTAATTACACCAC+AGG + chr3_4:57014858-57014877 Msa0508780:intron 35.0%
! TTTTACGGTGAGTTAACAGA+AGG - chr3_4:57015466-57015485 None:intergenic 35.0%
!!! TCACGTCAGCGTTTTTTTTA+CGG - chr3_4:57015051-57015070 None:intergenic 35.0%
AACTGTTGTCTTCTTTCCTT+CGG - chr3_4:57015142-57015161 None:intergenic 35.0%
ACCACACGAAATCTAATTGT+TGG + chr3_4:57015164-57015183 Msa0508780:intron 35.0%
TCCAACAATTAGATTTCGTG+TGG - chr3_4:57015168-57015187 None:intergenic 35.0%
! TGCAATGTACTTGGTAATCT+TGG - chr3_4:57015207-57015226 None:intergenic 35.0%
GATTACCAAGTACATTGCAA+AGG + chr3_4:57015208-57015227 Msa0508780:intron 35.0%
TATTGCCTTTGCAATGTACT+TGG - chr3_4:57015216-57015235 None:intergenic 35.0%
TAATACCAGCATTATTGCAG+GGG - chr3_4:57015315-57015334 None:intergenic 35.0%
GTAATACCAGCATTATTGCA+GGG - chr3_4:57015316-57015335 None:intergenic 35.0%
TGTAATACCAGCATTATTGC+AGG - chr3_4:57015317-57015336 None:intergenic 35.0%
GCTTGAATTCGTCAAATCAA+TGG - chr3_4:57015348-57015367 None:intergenic 35.0%
GATTTGACGAATTCAAGCTT+TGG + chr3_4:57015350-57015369 Msa0508780:intron 35.0%
TTGAGAATTGGGGAAATGTA+AGG + chr3_4:57015397-57015416 Msa0508780:intron 35.0%
TGAGAATTGGGGAAATGTAA+GGG + chr3_4:57015398-57015417 Msa0508780:intron 35.0%
GCACACTGTTACAAAGTTAA+AGG + chr3_4:57015497-57015516 Msa0508780:intron 35.0%
GTTTGACGTTTGTAACATAC+AGG - chr3_4:57015553-57015572 None:intergenic 35.0%
! ATTTGGCTTAATTACACCAC+AGG - chr3_4:57015644-57015663 None:intergenic 35.0%
TGTATCTTCATGTGGAAACA+TGG + chr3_4:57015742-57015761 Msa0508780:intron 35.0%
!! GATGACTATTTTGGATCACA+CGG + chr3_4:57015996-57016015 Msa0508780:intron 35.0%
! TGATCTATGGGCTAAGAATT+CGG - chr3_4:57016079-57016098 None:intergenic 35.0%
GGAAGGTTCAAAATGATCTA+TGG - chr3_4:57016092-57016111 None:intergenic 35.0%
GAGTACACCATAATATTGGA+AGG - chr3_4:57016109-57016128 None:intergenic 35.0%
ATGTTAAAAGAGTCTCACGT+TGG + chr3_4:57016130-57016149 Msa0508780:intron 35.0%
AGTCTCCTCCAATATTTGTT+GGG + chr3_4:57016412-57016431 Msa0508780:intron 35.0%
! ACAATTTTGTCGTCACATGT+TGG + chr3_4:57016539-57016558 Msa0508780:intron 35.0%
!!! TTGGTTTTGTGGATTGTATG+AGG + chr3_4:57016558-57016577 Msa0508780:intron 35.0%
ATCACACAAAGGAATGATAG+AGG - chr3_4:57016724-57016743 None:intergenic 35.0%
!! AAGTCTCTGAAATCACACAA+AGG - chr3_4:57016735-57016754 None:intergenic 35.0%
TGTGGTTGTTCTCCTAAATA+TGG - chr3_4:57016991-57017010 None:intergenic 35.0%
ATATTTACACCATTTGGAGG+AGG + chr3_4:57017368-57017387 Msa0508780:CDS 35.0%
TATTTACACCATTTGGAGGA+GGG + chr3_4:57017369-57017388 Msa0508780:CDS 35.0%
GATTTCAATTCAATGGCAGT+TGG + chr3_4:57017576-57017595 Msa0508780:intron 35.0%
GGTATCCTATTATAGTGAAG+CGG + chr3_4:57017654-57017673 Msa0508780:CDS 35.0%
!! AAGGAAGGAGCATTAATGGA+GGG - chr3_4:57009609-57009628 None:intergenic 40.0%
!! TGTGAAGGAAGGAGCATTAA+TGG - chr3_4:57009613-57009632 None:intergenic 40.0%
AGTGTGTGAATTGTGAAGGA+AGG - chr3_4:57009624-57009643 None:intergenic 40.0%
TAGAGGGTGAGAAAAAGAAG+AGG - chr3_4:57009653-57009672 None:intergenic 40.0%
TAGTGAAGATTGAACCGTAC+CGG - chr3_4:57009955-57009974 None:intergenic 40.0%
!! TAATAAACCGGTTCGTTTCC+GGG - chr3_4:57010015-57010034 None:intergenic 40.0%
GAAGGTTTGATATTGAACCG+GGG - chr3_4:57010072-57010091 None:intergenic 40.0%
! GCAGTGAATGTTTTCCAAGA+AGG - chr3_4:57010090-57010109 None:intergenic 40.0%
! ACCAAAAATCCAAGTTGAGC+CGG - chr3_4:57010219-57010238 None:intergenic 40.0%
!!! ACTTGGATTTTTGGTCCGAA+CGG + chr3_4:57010224-57010243 Msa0508780:CDS 40.0%
!!! TATATTTTTTGGTGGTGGCC+GGG + chr3_4:57010416-57010435 Msa0508780:intron 40.0%
GCATAATCTATGCAAAGGTC+TGG - chr3_4:57010451-57010470 None:intergenic 40.0%
! TATGTCATATGGGTTGTGTG+GGG + chr3_4:57010703-57010722 Msa0508780:intron 40.0%
TTATAGAGAAAGCTGGTCAC+TGG - chr3_4:57010744-57010763 None:intergenic 40.0%
! GAAAAGGTTTTCCTGCTACA+AGG + chr3_4:57011374-57011393 Msa0508780:intron 40.0%
TGATTATTCTCCCTTGTAGC+AGG - chr3_4:57011388-57011407 None:intergenic 40.0%
AATGAGTGTACGAGAATTGC+AGG + chr3_4:57011721-57011740 Msa0508780:intron 40.0%
AAACTCTCAGTCCATTCATC+TGG - chr3_4:57011865-57011884 None:intergenic 40.0%
GTGGTAGAGAAAAGAGGAAA+TGG - chr3_4:57011931-57011950 None:intergenic 40.0%
TAAAGGTTCATGCACCTTGA+TGG - chr3_4:57011965-57011984 None:intergenic 40.0%
AGTTTCAGTGAGGAACTTGA+TGG - chr3_4:57012504-57012523 None:intergenic 40.0%
TTAGTAAGACCGTATGGTTG+TGG + chr3_4:57012914-57012933 Msa0508780:intron 40.0%
TAGTAAGACCGTATGGTTGT+GGG + chr3_4:57012915-57012934 Msa0508780:intron 40.0%
!!! CACACCCACTAGTTTTTATG+TGG + chr3_4:57013015-57013034 Msa0508780:intron 40.0%
CACTCCCACATAAAAACTAG+TGG - chr3_4:57013252-57013271 None:intergenic 40.0%
! AAATCCTATAGGGGTTTGCT+AGG - chr3_4:57013136-57013155 None:intergenic 40.0%
CACTCCCACATAAAAACTAG+TGG + chr3_4:57013252-57013271 Msa0508780:intron 40.0%
!!! CACACCCACTAGTTTTTATG+TGG - chr3_4:57013015-57013034 None:intergenic 40.0%
!! TCAATGAAAGCATCACCACA+CGG - chr3_4:57013576-57013595 None:intergenic 40.0%
AGGATCAGATAACGAAAACG+AGG - chr3_4:57013601-57013620 None:intergenic 40.0%
ATAAGCAGAAAAGCTATCCG+AGG - chr3_4:57013649-57013668 None:intergenic 40.0%
CCACAAAAAAAAGGATCGGA+GGG - chr3_4:57013709-57013728 None:intergenic 40.0%
AAATCCCGGCCACAAAAAAA+AGG - chr3_4:57013718-57013737 None:intergenic 40.0%
TGAGCTTAGCTCAATTGGTA+TGG - chr3_4:57013773-57013792 None:intergenic 40.0%
!! TCAGGTTGAGTTGTTTGAGA+TGG + chr3_4:57014540-57014559 Msa0508780:intron 40.0%
TCAAATGCATTGAAGGGAGT+AGG - chr3_4:57014669-57014688 None:intergenic 40.0%
CATGCGTCAAATGCATTGAA+GGG - chr3_4:57014675-57014694 None:intergenic 40.0%
TCATGCGTCAAATGCATTGA+AGG - chr3_4:57014676-57014695 None:intergenic 40.0%
GCACACTGTTACAGAGTTAA+AGG - chr3_4:57015005-57015024 None:intergenic 40.0%
AATCAGGAGAAGATAACCGA+AGG + chr3_4:57015123-57015142 Msa0508780:intron 40.0%
TTGGGGAAATGTAAGGGTAA+AGG + chr3_4:57015404-57015423 Msa0508780:intron 40.0%
!!! CCACGTCAGCGTTTTTTTTA+CGG + chr3_4:57015451-57015470 Msa0508780:intron 40.0%
! TTTTGCACAAAGTGCATGGT+GGG - chr3_4:57015908-57015927 None:intergenic 40.0%
! ATTTTGCACAAAGTGCATGG+TGG - chr3_4:57015909-57015928 None:intergenic 40.0%
!! ATACGACCGATTTGATGGAA+GGG - chr3_4:57015947-57015966 None:intergenic 40.0%
!! AAGTCATACGACCGATTTGA+TGG - chr3_4:57015952-57015971 None:intergenic 40.0%
TCAAATCGGTCGTATGACTT+AGG + chr3_4:57015952-57015971 Msa0508780:intron 40.0%
TCGTATGACTTAGGAAATCG+TGG + chr3_4:57015961-57015980 Msa0508780:intron 40.0%
CGTATGACTTAGGAAATCGT+GGG + chr3_4:57015962-57015981 Msa0508780:intron 40.0%
GTATGACTTAGGAAATCGTG+GGG + chr3_4:57015963-57015982 Msa0508780:intron 40.0%
TAAAAGAGTCTCACGTTGGT+TGG + chr3_4:57016134-57016153 Msa0508780:intron 40.0%
! AAAAGAGTCTCACGTTGGTT+GGG + chr3_4:57016135-57016154 Msa0508780:intron 40.0%
GAGTCTCCTCCAATATTTGT+TGG + chr3_4:57016411-57016430 Msa0508780:intron 40.0%
GATAGCCCAACAAATATTGG+AGG - chr3_4:57016420-57016439 None:intergenic 40.0%
GCAGATAGCCCAACAAATAT+TGG - chr3_4:57016423-57016442 None:intergenic 40.0%
AGGTTGTGAATGAGACCTTA+AGG + chr3_4:57016946-57016965 Msa0508780:intron 40.0%
GGTTGTGAATGAGACCTTAA+GGG + chr3_4:57016947-57016966 Msa0508780:intron 40.0%
ACCACAGACATCGACATAAA+AGG + chr3_4:57017005-57017024 Msa0508780:CDS 40.0%
! ACCTTTTATGTCGATGTCTG+TGG - chr3_4:57017009-57017028 None:intergenic 40.0%
ATGCCCGACTTTGCAATAAT+AGG + chr3_4:57017110-57017129 Msa0508780:intron 40.0%
CACAATTCCTAAGGGAATGA+AGG + chr3_4:57017136-57017155 Msa0508780:CDS 40.0%
!! CGAGCATCTTTGAAATGTTC+AGG - chr3_4:57017194-57017213 None:intergenic 40.0%
TCTCTCCGCTTCACTATAAT+AGG - chr3_4:57017662-57017681 None:intergenic 40.0%
GAATCTACCAGATCATGCAT+TGG + chr3_4:57017683-57017702 Msa0508780:CDS 40.0%
ACCAGATCATGCATTGGAAT+TGG + chr3_4:57017689-57017708 Msa0508780:CDS 40.0%
TCCAATTCCAATGCATGATC+TGG - chr3_4:57017693-57017712 None:intergenic 40.0%
ATTGGATACACAGCAGATAC+AGG + chr3_4:57017707-57017726 Msa0508780:CDS 40.0%
TCAAATAGTTAACCCTGCCT+TGG - chr3_4:57017927-57017946 None:intergenic 40.0%
!! GAAGGAAGGAGCATTAATGG+AGG - chr3_4:57009610-57009629 None:intergenic 45.0%
TCTTCCTCCTCAGAAAACTC+CGG + chr3_4:57009810-57009829 Msa0508780:CDS 45.0%
!! CTGTCGGTTCACCAAAAACA+TGG - chr3_4:57009979-57009998 None:intergenic 45.0%
GGGTCAGCTGAAAAAACTGT+CGG - chr3_4:57009995-57010014 None:intergenic 45.0%
!!! GACAGTTTTTTCAGCTGACC+CGG + chr3_4:57009994-57010013 Msa0508780:CDS 45.0%
CTCTTTGAATGTAGCTACCC+CGG + chr3_4:57010052-57010071 Msa0508780:CDS 45.0%
! TTGATATAGACCGGCTCATC+CGG + chr3_4:57010197-57010216 Msa0508780:CDS 45.0%
! TCCGGCTCAACTTGGATTTT+TGG + chr3_4:57010215-57010234 Msa0508780:CDS 45.0%
!!! CTTGGATTTTTGGTCCGAAC+GGG + chr3_4:57010225-57010244 Msa0508780:CDS 45.0%
!!! ATATTTTTTGGTGGTGGCCG+GGG + chr3_4:57010417-57010436 Msa0508780:intron 45.0%
AGCTAGGCTCGAACATTTCT+TGG - chr3_4:57010662-57010681 None:intergenic 45.0%
GGCAAGTGATAAACTGAGCT+AGG - chr3_4:57010678-57010697 None:intergenic 45.0%
GGACACATTGTACTGAACCA+TGG - chr3_4:57011313-57011332 None:intergenic 45.0%
!! TGACATGCTTGGAGCATTGT+TGG + chr3_4:57012382-57012401 Msa0508780:CDS 45.0%
!! ATGTTGGCTTTGCTTGTTGC+TGG + chr3_4:57012446-57012465 Msa0508780:CDS 45.0%
AGGCTAAAGGAGTTTCAGTG+AGG - chr3_4:57012514-57012533 None:intergenic 45.0%
CACTGAAACTCCTTTAGCCT+TGG + chr3_4:57012514-57012533 Msa0508780:CDS 45.0%
! TTGAGTTGTGCCAAGGCTAA+AGG - chr3_4:57012527-57012546 None:intergenic 45.0%
!! TTTAGCCTTGGCACAACTCA+AGG + chr3_4:57012526-57012545 Msa0508780:CDS 45.0%
GTATCCTAGCAAACCCCTAT+AGG + chr3_4:57013129-57013148 Msa0508780:intron 45.0%
AGAAAAGCTATCCGAGGTTG+AGG - chr3_4:57013643-57013662 None:intergenic 45.0%
!!! CCCTCCGATCCTTTTTTTTG+TGG + chr3_4:57013706-57013725 Msa0508780:intron 45.0%
GCCACAAAAAAAAGGATCGG+AGG - chr3_4:57013710-57013729 None:intergenic 45.0%
CCGGCCACAAAAAAAAGGAT+CGG - chr3_4:57013713-57013732 None:intergenic 45.0%
!!! CCGATCCTTTTTTTTGTGGC+CGG + chr3_4:57013710-57013729 Msa0508780:intron 45.0%
!!! CGATCCTTTTTTTTGTGGCC+GGG + chr3_4:57013711-57013730 Msa0508780:intron 45.0%
CCTTGTGAGCTTAGCTCAAT+TGG - chr3_4:57013778-57013797 None:intergenic 45.0%
CCAATTGAGCTAAGCTCACA+AGG + chr3_4:57013775-57013794 Msa0508780:intron 45.0%
AGGGTCATACGTAAGCTCTT+AGG - chr3_4:57014247-57014266 None:intergenic 45.0%
CCTAAGTCAAGCCAATGCAT+GGG - chr3_4:57014481-57014500 None:intergenic 45.0%
!! CCATGCATTGGCTTGACTTA+GGG + chr3_4:57014479-57014498 Msa0508780:intron 45.0%
!! CATGCATTGGCTTGACTTAG+GGG + chr3_4:57014480-57014499 Msa0508780:intron 45.0%
CGTCAAACTTAAAGGACCTG+TGG - chr3_4:57015625-57015644 None:intergenic 45.0%
TTCTTCCCCTGCAATAATGC+TGG + chr3_4:57015307-57015326 Msa0508780:intron 45.0%
TGGAGTCAGGGTTTGAGAAT+TGG + chr3_4:57015385-57015404 Msa0508780:intron 45.0%
GGAGTCAGGGTTTGAGAATT+GGG + chr3_4:57015386-57015405 Msa0508780:intron 45.0%
GAGTCAGGGTTTGAGAATTG+GGG + chr3_4:57015387-57015406 Msa0508780:intron 45.0%
CCGTAAAAAAAACGCTGACG+TGG - chr3_4:57015048-57015067 None:intergenic 45.0%
CGTCAAACTTAAAGGACCTG+TGG + chr3_4:57015625-57015644 Msa0508780:intron 45.0%
AATCACACGGACAAACGAAC+TGG - chr3_4:57015867-57015886 None:intergenic 45.0%
TTGGACCCCTTCCATCAAAT+CGG + chr3_4:57015938-57015957 Msa0508780:intron 45.0%
!! TACGACCGATTTGATGGAAG+GGG - chr3_4:57015946-57015965 None:intergenic 45.0%
!! CATACGACCGATTTGATGGA+AGG - chr3_4:57015948-57015967 None:intergenic 45.0%
GTATCATGCACCACCTTCAT+AGG + chr3_4:57016039-57016058 Msa0508780:intron 45.0%
TTGTTGGGCTATCTGCTATC+AGG + chr3_4:57016427-57016446 Msa0508780:intron 45.0%
!!! GTCGTCACATGTTGGTTTTG+TGG + chr3_4:57016547-57016566 Msa0508780:intron 45.0%
AGCATGAGCAGATAAGAGCA+AGG + chr3_4:57016785-57016804 Msa0508780:CDS 45.0%
GCAATCACCTTCATTCCCTT+AGG - chr3_4:57017146-57017165 None:intergenic 45.0%
TCCTGCTGAAGAAGATAAGC+TGG + chr3_4:57017601-57017620 Msa0508780:CDS 45.0%
ACCAGCTTATCTTCTTCAGC+AGG - chr3_4:57017605-57017624 None:intergenic 45.0%
!!! TGGTGTTTTTTCCGACCACT+AGG + chr3_4:57017621-57017640 Msa0508780:CDS 45.0%
GATACACAGCAGATACAGGA+AGG + chr3_4:57017711-57017730 Msa0508780:CDS 45.0%
!!! AATATTTATGTTATATTTTT+TGG + chr3_4:57010405-57010424 Msa0508780:intron 5.0%
!! TATATATATATATATATATG+GGG - chr3_4:57013307-57013326 None:intergenic 5.0%
!! GGAGTTTTCTGAGGAGGAAG+AGG - chr3_4:57009811-57009830 None:intergenic 50.0%
AGTCTCGGGTTACCGTTCAT+CGG + chr3_4:57009860-57009879 Msa0508780:CDS 50.0%
TTCACTCGCTGGTCGATGAA+TGG - chr3_4:57009932-57009951 None:intergenic 50.0%
CTCCATGAGAAGAACCCGTT+CGG - chr3_4:57010242-57010261 None:intergenic 50.0%
TCTCATGGAGGAGGCTAAGA+AGG + chr3_4:57010252-57010271 Msa0508780:CDS 50.0%
! TCATATGGGTTGTGTGGGGT+GGG + chr3_4:57010707-57010726 Msa0508780:intron 50.0%
CGGTAGGTGGTAGAGAAAAG+AGG - chr3_4:57011937-57011956 None:intergenic 50.0%
! CATGCACCTTGATGGCTCTA+CGG - chr3_4:57011957-57011976 None:intergenic 50.0%
!! AGGCACTGACACTAGTAGTC+AGG + chr3_4:57012318-57012337 Msa0508780:CDS 50.0%
!! CTTGGAGCATTGTTGGCATC+TGG + chr3_4:57012389-57012408 Msa0508780:CDS 50.0%
TGGTGAACAGTTCTCAGACG+AGG + chr3_4:57012409-57012428 Msa0508780:CDS 50.0%
! ACGTACCTTGAGTTGTGCCA+AGG - chr3_4:57012534-57012553 None:intergenic 50.0%
TTATTCCACACTCCACCGTG+TGG + chr3_4:57013558-57013577 Msa0508780:intron 50.0%
!! ATGAAAGCATCACCACACGG+TGG - chr3_4:57013573-57013592 None:intergenic 50.0%
GTGCAGAGCATAGAGTGGAA+AGG - chr3_4:57013621-57013640 None:intergenic 50.0%
TTGAGGTGCAGAGCATAGAG+TGG - chr3_4:57013626-57013645 None:intergenic 50.0%
TATGCTCTGCACCTCAACCT+CGG + chr3_4:57013629-57013648 Msa0508780:intron 50.0%
! AAGGTCTGGGGTTCAAATCC+CGG - chr3_4:57013732-57013751 None:intergenic 50.0%
!! CCCATGCATTGGCTTGACTT+AGG + chr3_4:57014478-57014497 Msa0508780:intron 50.0%
CCCTAAGTCAAGCCAATGCA+TGG - chr3_4:57014482-57014501 None:intergenic 50.0%
GAAGGGGAGGGGTAGATATT+AGG + chr3_4:57014514-57014533 Msa0508780:intron 50.0%
GGGGTAGATATTAGGTGGTC+AGG + chr3_4:57014522-57014541 Msa0508780:intron 50.0%
TTATTGCAGGGGAAGAACGC+AGG - chr3_4:57015304-57015323 None:intergenic 50.0%
TGAACATGAAGCGTGCGCTA+TGG - chr3_4:57015834-57015853 None:intergenic 50.0%
! CACAAAGTGCATGGTGGGAA+GGG - chr3_4:57015903-57015922 None:intergenic 50.0%
TCATGCACCACCTTCATAGG+TGG + chr3_4:57016042-57016061 Msa0508780:intron 50.0%
!! GCTAAGAATTCGGTGCATGG+TGG - chr3_4:57016069-57016088 None:intergenic 50.0%
!! TGGGCTAAGAATTCGGTGCA+TGG - chr3_4:57016072-57016091 None:intergenic 50.0%
GACTCTGATACTACTCCCTC+TGG - chr3_4:57016396-57016415 None:intergenic 50.0%
CATAACCGATTGGGCTATGC+AGG + chr3_4:57016926-57016945 Msa0508780:intron 50.0%
CACAACCTGCATAGCCCAAT+CGG - chr3_4:57016934-57016953 None:intergenic 50.0%
ATGCTCGCACCTTCAATCCA+TGG + chr3_4:57017207-57017226 Msa0508780:CDS 50.0%
GCACCTTCAATCCATGGAGA+TGG + chr3_4:57017213-57017232 Msa0508780:CDS 50.0%
! CTGCCATCTCCATGGATTGA+AGG - chr3_4:57017219-57017238 None:intergenic 50.0%
CTTCAATCCATGGAGATGGC+AGG + chr3_4:57017217-57017236 Msa0508780:CDS 50.0%
TCATGTACCTGCCATCTCCA+TGG - chr3_4:57017227-57017246 None:intergenic 50.0%
GCTTGCCAGAGTTGTGCTTT+CGG + chr3_4:57017415-57017434 Msa0508780:CDS 50.0%
! GAAGACCGAAAGCACAACTC+TGG - chr3_4:57017423-57017442 None:intergenic 50.0%
ATACCTCTTCTGCGTCCTAG+TGG - chr3_4:57017639-57017658 None:intergenic 50.0%
AAGATGCACACGAGTGGGTG+GGG - chr3_4:57009584-57009603 None:intergenic 55.0%
GAAGATGCACACGAGTGGGT+GGG - chr3_4:57009585-57009604 None:intergenic 55.0%
AGAAGATGCACACGAGTGGG+TGG - chr3_4:57009586-57009605 None:intergenic 55.0%
GGGAGAAGATGCACACGAGT+GGG - chr3_4:57009589-57009608 None:intergenic 55.0%
AGGGAGAAGATGCACACGAG+TGG - chr3_4:57009590-57009609 None:intergenic 55.0%
!! CGTACCGGAGTTTTCTGAGG+AGG - chr3_4:57009817-57009836 None:intergenic 55.0%
! TCGCGTACCGGAGTTTTCTG+AGG - chr3_4:57009820-57009839 None:intergenic 55.0%
TCATCGACCAGCGAGTGAAC+CGG + chr3_4:57009933-57009952 Msa0508780:CDS 55.0%
! GTCCGAACGGGTTCTTCTCA+TGG + chr3_4:57010237-57010256 Msa0508780:CDS 55.0%
! CGAACGGGTTCTTCTCATGG+AGG + chr3_4:57010240-57010259 Msa0508780:CDS 55.0%
ACGGGTTCTTCTCATGGAGG+AGG + chr3_4:57010243-57010262 Msa0508780:CDS 55.0%
AAGGTCTGGCGTTCAAACCC+CGG - chr3_4:57010437-57010456 None:intergenic 55.0%
! GTCATATGGGTTGTGTGGGG+TGG + chr3_4:57010706-57010725 Msa0508780:intron 55.0%
! CTTGATGGCTCTACGGTAGG+TGG - chr3_4:57011950-57011969 None:intergenic 55.0%
CACCTACCGTAGAGCCATCA+AGG + chr3_4:57011948-57011967 Msa0508780:CDS 55.0%
! CACCTTGATGGCTCTACGGT+AGG - chr3_4:57011953-57011972 None:intergenic 55.0%
GGCAAGAACAAAGGTGGCAG+AGG + chr3_4:57012298-57012317 Msa0508780:intron 55.0%
GGGGAGGGGTAGATATTAGG+TGG + chr3_4:57014517-57014536 Msa0508780:intron 55.0%
! GCACAAAGTGCATGGTGGGA+AGG - chr3_4:57015904-57015923 None:intergenic 55.0%
! TGGTGGACCACCTATGAAGG+TGG - chr3_4:57016052-57016071 None:intergenic 55.0%
!! GCATGGTGGACCACCTATGA+AGG - chr3_4:57016055-57016074 None:intergenic 55.0%
AAGAGCAAGGAGTGAGCCAG+AGG + chr3_4:57016798-57016817 Msa0508780:CDS 55.0%
TCAGAAGCTGTAGCAAGCCC+TGG + chr3_4:57017341-57017360 Msa0508780:CDS 55.0%
CAGAAGCTGTAGCAAGCCCT+GGG + chr3_4:57017342-57017361 Msa0508780:CDS 55.0%
AACCTTGGCCCTCCTCCAAA+TGG - chr3_4:57017380-57017399 None:intergenic 55.0%
TCATAGCCTGGGCACAACCT+TGG - chr3_4:57017395-57017414 None:intergenic 55.0%
CTCTGGCAAGCTCATAGCCT+GGG - chr3_4:57017406-57017425 None:intergenic 55.0%
ACTCTGGCAAGCTCATAGCC+TGG - chr3_4:57017407-57017426 None:intergenic 55.0%
TTCGGTCTTCCTTCACCGCA+TGG + chr3_4:57017433-57017452 Msa0508780:CDS 55.0%
ACCTGATGCGAGTGACCATG+CGG - chr3_4:57017451-57017470 None:intergenic 55.0%
CTCTTCTGCGTCCTAGTGGT+CGG - chr3_4:57017635-57017654 None:intergenic 55.0%
AGATGCACACGAGTGGGTGG+GGG - chr3_4:57009583-57009602 None:intergenic 60.0%
AACTCCGGTACGCGAGACTC+CGG + chr3_4:57009825-57009844 Msa0508780:CDS 60.0%
AACGGTAACCCGAGACTCCC+CGG - chr3_4:57009857-57009876 None:intergenic 60.0%
CGCTGGTCGATGAATGGCTC+TGG - chr3_4:57009926-57009945 None:intergenic 60.0%
GACCAGCGAGTGAACCGGTA+CGG + chr3_4:57009938-57009957 Msa0508780:CDS 60.0%
!! AACCGTACCGGTTCACTCGC+TGG - chr3_4:57009943-57009962 None:intergenic 60.0%
CAGCTGACCCGGAAACGAAC+CGG + chr3_4:57010005-57010024 Msa0508780:CDS 60.0%
! CCAAGTTGAGCCGGATGAGC+CGG - chr3_4:57010210-57010229 None:intergenic 60.0%
CATCACCACACGGTGGAGTG+TGG - chr3_4:57013566-57013585 None:intergenic 60.0%
TTAGGGGCAGCCGCAGAAGA+AGG + chr3_4:57014496-57014515 Msa0508780:intron 60.0%
TAGGGGCAGCCGCAGAAGAA+GGG + chr3_4:57014497-57014516 Msa0508780:intron 60.0%
CTACCCCTCCCCTTCTTCTG+CGG - chr3_4:57014509-57014528 None:intergenic 60.0%
AGGTTTCCGCCAGTGAGCCA+TGG + chr3_4:57016447-57016466 Msa0508780:intron 60.0%
CCAACACCATGGCTCACTGG+CGG - chr3_4:57016456-57016475 None:intergenic 60.0%
CGCCAGTGAGCCATGGTGTT+GGG + chr3_4:57016454-57016473 Msa0508780:intron 60.0%
! AGCCAGAGGCAGCACTGGAA+TGG + chr3_4:57016812-57016831 Msa0508780:CDS 60.0%
GTCCATTCCAGTGCTGCCTC+TGG - chr3_4:57016817-57016836 None:intergenic 60.0%
CACCATTTGGAGGAGGGCCA+AGG + chr3_4:57017375-57017394 Msa0508780:CDS 60.0%
TGCGAGTGACCATGCGGTGA+AGG - chr3_4:57017445-57017464 None:intergenic 60.0%
ACCGCATGGTCACTCGCATC+AGG + chr3_4:57017447-57017466 Msa0508780:CDS 60.0%
CGACCACTAGGACGCAGAAG+AGG + chr3_4:57017633-57017652 Msa0508780:CDS 60.0%
!! GAGTGGGTGGGGGTACCCTA+TGG - chr3_4:57009573-57009592 None:intergenic 65.0%
GTAGCCGGAGTCTCGCGTAC+CGG - chr3_4:57009832-57009851 None:intergenic 65.0%
CCGGCTCATCCGGCTCAACT+TGG + chr3_4:57010207-57010226 Msa0508780:CDS 65.0%
! ATGGGTTGTGTGGGGTGGGC+AGG + chr3_4:57010711-57010730 Msa0508780:intron 65.0%
TGTGTGGGGTGGGCAGGTTG+TGG + chr3_4:57010717-57010736 Msa0508780:intron 65.0%
AGGGGCAGCCGCAGAAGAAG+GGG + chr3_4:57014498-57014517 Msa0508780:intron 65.0%
GCAGCCGCAGAAGAAGGGGA+GGG + chr3_4:57014502-57014521 Msa0508780:intron 65.0%
CAGCCGCAGAAGAAGGGGAG+GGG + chr3_4:57014503-57014522 Msa0508780:intron 65.0%
CCGCCAGTGAGCCATGGTGT+TGG + chr3_4:57016453-57016472 Msa0508780:intron 65.0%
CGCCCAACACCATGGCTCAC+TGG - chr3_4:57016459-57016478 None:intergenic 65.0%
! GCCATGGTGTTGGGCGTGAG+AGG + chr3_4:57016463-57016482 Msa0508780:intron 65.0%
GCCTCTCACGCCCAACACCA+TGG - chr3_4:57016467-57016486 None:intergenic 65.0%
GAGTGAGCCAGAGGCAGCAC+TGG + chr3_4:57016807-57016826 Msa0508780:CDS 65.0%
CGCGAGACTCCGGCTACCAC+CGG + chr3_4:57009835-57009854 Msa0508780:CDS 70.0%
GCGAGACTCCGGCTACCACC+GGG + chr3_4:57009836-57009855 Msa0508780:CDS 70.0%
CGAGACTCCGGCTACCACCG+GGG + chr3_4:57009837-57009856 Msa0508780:CDS 70.0%
CGAGACTCCCCGGTGGTAGC+CGG - chr3_4:57009847-57009866 None:intergenic 70.0%
CGGCTACCACCGGGGAGTCT+CGG + chr3_4:57009845-57009864 Msa0508780:CDS 70.0%
GGCTACCACCGGGGAGTCTC+GGG + chr3_4:57009846-57009865 Msa0508780:CDS 70.0%
GGTAACCCGAGACTCCCCGG+TGG - chr3_4:57009854-57009873 None:intergenic 70.0%
GGCAGCCGCAGAAGAAGGGG+AGG + chr3_4:57014501-57014520 Msa0508780:intron 70.0%
GGAGGGCCAAGGTTGTGCCC+AGG + chr3_4:57017386-57017405 Msa0508780:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 57009469 57017967 57009469 ID=Msa0508780;Name=Msa0508780
chr3_4 mRNA 57009469 57017967 57009469 ID=Msa0508780-mRNA-1;Parent=Msa0508780;Name=Msa0508780-mRNA-1;_AED=0.08;_eAED=0.08;_QI=301|1|1|1|1|1|8|219|488
chr3_4 exon 57009469 57010273 57009469 ID=Msa0508780-mRNA-1:exon:12926;Parent=Msa0508780-mRNA-1
chr3_4 exon 57011820 57011969 57011820 ID=Msa0508780-mRNA-1:exon:12927;Parent=Msa0508780-mRNA-1
chr3_4 exon 57012299 57012547 57012299 ID=Msa0508780-mRNA-1:exon:12928;Parent=Msa0508780-mRNA-1
chr3_4 exon 57016781 57016867 57016781 ID=Msa0508780-mRNA-1:exon:12929;Parent=Msa0508780-mRNA-1
chr3_4 exon 57016948 57017026 57016948 ID=Msa0508780-mRNA-1:exon:12930;Parent=Msa0508780-mRNA-1
chr3_4 exon 57017132 57017238 57017132 ID=Msa0508780-mRNA-1:exon:12931;Parent=Msa0508780-mRNA-1
chr3_4 exon 57017332 57017468 57017332 ID=Msa0508780-mRNA-1:exon:12932;Parent=Msa0508780-mRNA-1
chr3_4 exon 57017595 57017967 57017595 ID=Msa0508780-mRNA-1:exon:12933;Parent=Msa0508780-mRNA-1
chr3_4 five_prime_UTR 57009469 57009769 57009469 ID=Msa0508780-mRNA-1:five_prime_utr;Parent=Msa0508780-mRNA-1
chr3_4 CDS 57009770 57010273 57009770 ID=Msa0508780-mRNA-1:cds;Parent=Msa0508780-mRNA-1
chr3_4 CDS 57011820 57011969 57011820 ID=Msa0508780-mRNA-1:cds;Parent=Msa0508780-mRNA-1
chr3_4 CDS 57012299 57012547 57012299 ID=Msa0508780-mRNA-1:cds;Parent=Msa0508780-mRNA-1
chr3_4 CDS 57016781 57016867 57016781 ID=Msa0508780-mRNA-1:cds;Parent=Msa0508780-mRNA-1
chr3_4 CDS 57016948 57017026 57016948 ID=Msa0508780-mRNA-1:cds;Parent=Msa0508780-mRNA-1
chr3_4 CDS 57017132 57017238 57017132 ID=Msa0508780-mRNA-1:cds;Parent=Msa0508780-mRNA-1
chr3_4 CDS 57017332 57017468 57017332 ID=Msa0508780-mRNA-1:cds;Parent=Msa0508780-mRNA-1
chr3_4 CDS 57017595 57017748 57017595 ID=Msa0508780-mRNA-1:cds;Parent=Msa0508780-mRNA-1
chr3_4 three_prime_UTR 57017749 57017967 57017749 ID=Msa0508780-mRNA-1:three_prime_utr;Parent=Msa0508780-mRNA-1
Gene Sequence

>Msa0508780

ATGGCTTATTTCCTCTTCTTCATCATCTTCATCTTCTTCCTCTTCCTCCTCAGAAAACTCCGGTACGCGAGACTCCGGCTACCACCGGGGAGTCTCGGGTTACCGTTCATCGGAGAAACTTTACAAATGATATCAGCATACAAGAGTGACAATCCAGAGCCATTCATCGACCAGCGAGTGAACCGGTACGGTTCAATCTTCACTAGCCATGTTTTTGGTGAACCGACAGTTTTTTCAGCTGACCCGGAAACGAACCGGTTTATTATTATGAATGAAGGGAAGCTCTTTGAATGTAGCTACCCCGGTTCAATATCAAACCTTCTTGGAAAACATTCACTGCTTCTTATGAAGGGTTCTCTTCACAAGAAAATGCATTCTCTCACTATGAGTTTTGCTAATTCATCTATTATTAAGGATCATCTTCTCTTTGATATAGACCGGCTCATCCGGCTCAACTTGGATTTTTGGTCCGAACGGGTTCTTCTCATGGAGGAGGCTAAGAAGATAACATTTGAGCTGACAGTTAAACAGCTGATGAGTTTTGATCCAGATGAATGGACTGAGAGTTTAAGGAAAGAGTACATGCTTGTAATTGAAGGGTTTTTCACTCTCCCATTTCCTCTTTTCTCTACCACCTACCGTAGAGCCATCAAGGCAAGAACAAAGGTGGCAGAGGCACTGACACTAGTAGTCAGGCAGAGAAGAAAAGAGAATGAAATAGGCAAAGAGAAAAAGAATGACATGCTTGGAGCATTGTTGGCATCTGGTGAACAGTTCTCAGACGAGGAAATAGTTGATTTTATGTTGGCTTTGCTTGTTGCTGGTTATGAAACTACTTCTACTATTATGACTCTTGCCATCAAGTTCCTCACTGAAACTCCTTTAGCCTTGGCACAACTCAAGGAAGAGCATGAGCAGATAAGAGCAAGGAGTGAGCCAGAGGCAGCACTGGAATGGACAGATTACAAGTCAATGACATTTACTCAATGCGTTGTGAATGAGACCTTAAGGGTTGCAAACATAATTGGTGCCATATTTAGGAGAACAACCACAGACATCGACATAAAAGGTTACACAATTCCTAAGGGAATGAAGGTGATTGCATCGTTTCGTGCTGTGCATTTGAATCCTGAACATTTCAAAGATGCTCGCACCTTCAATCCATGGAGATGGCAGAATAATAACTCAGAAGCTGTAGCAAGCCCTGGGAATATATTTACACCATTTGGAGGAGGGCCAAGGTTGTGCCCAGGCTATGAGCTTGCCAGAGTTGTGCTTTCGGTCTTCCTTCACCGCATGGTCACTCGCATCAGTTGGGTTCCTGCTGAAGAAGATAAGCTGGTGTTTTTTCCGACCACTAGGACGCAGAAGAGGTATCCTATTATAGTGAAGCGGAGAGAAGAATCTACCAGATCATGCATTGGAATTGGATACACAGCAGATACAGGAAGGCAAAAAGAGAGCTGA
Protein sequence

>Msa0508780

MAYFLFFIIFIFFLFLLRKLRYARLRLPPGSLGLPFIGETLQMISAYKSDNPEPFIDQRVNRYGSIFTSHVFGEPTVFSADPETNRFIIMNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKKMHSLTMSFANSSIIKDHLLFDIDRLIRLNLDFWSERVLLMEEAKKITFELTVKQLMSFDPDEWTESLRKEYMLVIEGFFTLPFPLFSTTYRRAIKARTKVAEALTLVVRQRRKENEIGKEKKNDMLGALLASGEQFSDEEIVDFMLALLVAGYETTSTIMTLAIKFLTETPLALAQLKEEHEQIRARSEPEAALEWTDYKSMTFTQCVVNETLRVANIIGAIFRRTTTDIDIKGYTIPKGMKVIASFRAVHLNPEHFKDARTFNPWRWQNNNSEAVASPGNIFTPFGGGPRLCPGYELARVVLSVFLHRMVTRISWVPAEEDKLVFFPTTRTQKRYPIIVKRREESTRSCIGIGYTADTGRQKES*