AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0801020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0801020 MtrunA17_Chr5g0407451 99.346 306 2 0 1 306 1 306 0.0 627
Msa0801020 MtrunA17_Chr4g0051841 62.245 294 105 2 16 303 24 317 2.31e-135 386
Msa0801020 MtrunA17_Chr7g0251981 48.986 296 147 1 7 298 68 363 9.93e-102 303
Msa0801020 MtrunA17_Chr8g0385891 49.296 284 140 1 12 291 64 347 1.08e-99 296
Msa0801020 MtrunA17_Chr6g0461981 48.252 286 144 1 16 297 58 343 3.84e-98 293
Msa0801020 MtrunA17_Chr5g0431531 26.923 286 186 5 16 286 34 311 7.46e-20 88.2
Msa0801020 MtrunA17_Chr4g0028531 25.163 306 193 11 3 285 7 299 6.81e-16 76.6
Msa0801020 MtrunA17_Chr5g0396801 25.526 333 195 12 1 289 16 339 1.36e-13 70.5
Msa0801020 MtrunA17_Chr7g0240341 26.437 174 120 2 22 187 135 308 2.32e-13 69.3
Msa0801020 MtrunA17_Chr8g0385571 25.714 175 120 4 23 188 324 497 1.20e-12 68.2
Msa0801020 MtrunA17_Chr7g0269701 29.714 175 110 4 31 193 133 306 1.85e-12 67.0
Msa0801020 MtrunA17_Chr8g0347451 24.251 334 199 9 3 291 31 355 2.83e-12 66.6
Msa0801020 MtrunA17_Chr5g0423111 28.889 180 110 5 34 197 132 309 3.01e-12 66.6
Msa0801020 MtrunA17_Chr7g0241521 25.131 191 130 3 12 195 117 301 5.60e-12 65.5
Msa0801020 MtrunA17_Chr3g0131501 23.729 177 122 4 22 187 300 474 7.92e-12 65.5
Msa0801020 MtrunA17_Chr4g0008061 29.348 184 104 5 27 188 21 200 9.43e-12 64.7
Msa0801020 MtrunA17_Chr8g0372531 28.877 187 101 9 33 193 125 305 1.13e-11 64.3
Msa0801020 MtrunA17_Chr1g0195101 27.746 173 112 4 33 193 132 303 2.08e-11 63.5
Msa0801020 MtrunA17_Chr3g0103681 26.708 161 110 2 36 189 135 294 2.32e-11 63.5
Msa0801020 MtrunA17_Chr7g0252401 24.561 171 123 3 22 187 304 473 3.44e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0801020 AT2G17270.1 65.017 303 105 1 1 302 1 303 1.84e-154 434
Msa0801020 AT5G14040.1 50.690 290 139 1 13 298 74 363 2.23e-104 310
Msa0801020 AT3G48850.1 48.780 287 143 1 13 295 63 349 2.43e-104 309
Msa0801020 AT1G07030.1 26.786 280 183 6 22 286 41 313 7.08e-19 85.9
Msa0801020 AT5G01340.1 27.368 285 177 9 21 285 21 295 2.11e-18 84.3
Msa0801020 AT2G30160.1 26.578 301 185 8 9 286 31 318 8.20e-18 82.8
Msa0801020 AT3G53940.1 28.161 174 117 2 22 187 181 354 1.52e-15 76.6
Msa0801020 AT2G37890.1 27.586 174 118 2 22 187 153 326 1.71e-14 73.6
Msa0801020 AT3G20240.1 24.742 291 186 9 22 286 53 336 2.21e-12 67.4
Msa0801020 AT5G66380.1 27.660 188 106 7 33 196 122 303 3.52e-12 66.2
Msa0801020 AT3G54110.1 22.905 179 131 1 22 193 119 297 4.73e-12 65.9
Msa0801020 AT4G01100.3 26.887 212 121 6 11 193 88 294 5.65e-12 65.9
Msa0801020 AT4G01100.1 26.887 212 121 6 11 193 138 344 6.99e-12 65.9
Msa0801020 AT4G01100.2 26.887 212 121 6 11 193 152 358 1.27e-11 65.1
Msa0801020 AT4G03115.1 24.915 293 189 9 16 293 37 313 2.00e-11 64.3
Msa0801020 AT4G03115.3 24.915 293 189 9 16 293 69 345 3.11e-11 63.9
Msa0801020 AT5G58970.1 26.054 261 154 9 32 265 27 275 3.99e-11 63.2
Msa0801020 AT3G21390.1 25.481 208 125 5 19 197 128 334 4.58e-11 63.2
Msa0801020 AT3G21390.2 25.481 208 125 5 19 197 150 356 4.71e-11 63.2
Msa0801020 AT5G48970.2 25.243 206 119 5 19 193 62 263 6.88e-11 62.0
Msa0801020 AT5G48970.1 25.243 206 119 5 19 193 133 334 6.94e-11 62.8

Find 102 sgRNAs with CRISPR-Local

Find 508 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAATACTGTAATATTTAAT+TGG 0.125547 5_3:-14617738 None:intergenic
CTCATTAAGTTTGTAGAATA+TGG 0.161414 5_3:+14623614 Msa0801020:three_prime_UTR
CCGTGGACTTGTTCCACTTT+TGG 0.215295 5_3:+14618188 Msa0801020:CDS
CCTAAGAAGTTCCAACAAAA+TGG 0.233444 5_3:+14616441 None:intergenic
AAGACTCCTGGTAAATAAAT+TGG 0.271424 5_3:-14619372 None:intergenic
AAATGGACATAGAGCTAAAT+TGG 0.273532 5_3:-14617964 None:intergenic
GTTGTTGCATTCACAAGAAT+TGG 0.302169 5_3:-14623712 None:intergenic
GGATGGACAGGCAAGTTCTT+TGG 0.324400 5_3:+14617813 Msa0801020:CDS
GCTCAAGGAGGGTGCAGATT+TGG 0.325080 5_3:+14617843 Msa0801020:CDS
GAGTTCAGTGAAGGAATAAA+TGG 0.327741 5_3:+14616656 Msa0801020:five_prime_UTR
CCAACCAGCAACATTCTAAT+AGG 0.348096 5_3:-14619395 None:intergenic
TCTTCCTATTAGAATGTTGC+TGG 0.355082 5_3:+14619391 Msa0801020:CDS
TCAGTATGATACATTACTTC+TGG 0.373719 5_3:-14623837 None:intergenic
CCTTCTGCTGCATATACCTT+TGG 0.377619 5_3:-14618050 None:intergenic
TATTATGCCCTTTGCACCAT+TGG 0.395910 5_3:+14616765 Msa0801020:CDS
AATACTCATTAACATTATCT+TGG 0.397648 5_3:+14623983 Msa0801020:three_prime_UTR
CTAAGAAGTTCCAACAAAAT+GGG 0.402286 5_3:+14616442 None:intergenic
AAATACTGTAATATTTAATT+GGG 0.407520 5_3:-14617737 None:intergenic
AACCATTGCAAAGTTATAGA+AGG 0.409895 5_3:-14619419 None:intergenic
GTGGAGCACACCAAGAAGTA+TGG 0.422894 5_3:-14623934 None:intergenic
CATTTGAAGCTGTTAAAGTC+AGG 0.432003 5_3:+14617982 Msa0801020:CDS
AAAAGCCGAGAGTCTTGTTC+TGG 0.432484 5_3:+14619239 Msa0801020:CDS
CGTGCTTTACTACGTTATTG+AGG 0.441119 5_3:+14617763 Msa0801020:CDS
ACTAATCTTTCGTGTCAGAT+AGG 0.445085 5_3:-14623773 None:intergenic
TATGCTAAGGGCATGTTTGA+CGG 0.461515 5_3:+14618023 Msa0801020:CDS
CTGACTTTAACAGCTTCAAA+TGG 0.463411 5_3:-14617981 None:intergenic
GGGAGTTTACTCCAATGTAT+TGG 0.465784 5_3:+14617884 Msa0801020:CDS
TTGTGCGATTCCTCCTTCCA+TGG 0.468396 5_3:-14616727 None:intergenic
TTTATTAGCAATGCTTGTGC+TGG 0.470214 5_3:+14623888 Msa0801020:three_prime_UTR
GGCTAGCCAATTTATTTACC+AGG 0.471960 5_3:+14619366 Msa0801020:CDS
AACACTGAAGAAAAGGATCA+TGG 0.480260 5_3:+14616701 Msa0801020:exon
CATTCCTCCAATGGTGCAAA+GGG 0.480811 5_3:-14616772 None:intergenic
CCTATTAGAATGTTGCTGGT+TGG 0.483372 5_3:+14619395 Msa0801020:CDS
GTCCTTCTATAACTTTGCAA+TGG 0.485403 5_3:+14619417 Msa0801020:CDS
GTGCTTTACTACGTTATTGA+GGG 0.486855 5_3:+14617764 Msa0801020:CDS
TTCTTTGGCTATGGTGCTCA+AGG 0.488078 5_3:+14617828 Msa0801020:CDS
TGTTTAGCTGGTTATACCGC+TGG 0.496234 5_3:+14619156 Msa0801020:CDS
GTTGCGACTTCACCACTAGT+TGG 0.508085 5_3:-14623441 None:intergenic
TATGCCCTTTGCACCATTGG+AGG 0.515475 5_3:+14616768 Msa0801020:CDS
ACAGGCAAGTTCTTTGGCTA+TGG 0.516450 5_3:+14617819 Msa0801020:CDS
CAAAGTTCTTCCCCTAGAGT+TGG 0.517109 5_3:-14623737 None:intergenic
GAAAAGGATCATGGCGGCCA+TGG 0.517987 5_3:+14616710 Msa0801020:exon
AGCACAACCTAGTTATGCTA+AGG 0.519278 5_3:+14618010 Msa0801020:CDS
TGCAACAACATCCAACTCTA+GGG 0.522507 5_3:+14623726 Msa0801020:three_prime_UTR
ATGCAACAACATCCAACTCT+AGG 0.524087 5_3:+14623725 Msa0801020:three_prime_UTR
TTGGCTATGGTGCTCAAGGA+GGG 0.525340 5_3:+14617832 Msa0801020:CDS
CTAGGTGTGACATGTTTAGC+TGG 0.525462 5_3:+14619144 Msa0801020:CDS
GTCCTGTGGAAAGGATGGAC+AGG 0.530212 5_3:+14617801 Msa0801020:CDS
TGAGGCAATTAACATTAAGC+AGG 0.530480 5_3:+14616481 Msa0801020:five_prime_UTR
GCCAGACCCTTCTTCTAAGT+CGG 0.530551 5_3:-14623463 None:intergenic
GAAGCTACTATATTATCAGC+AGG 0.533613 5_3:-14619204 None:intergenic
TTAACTTTCAAAACATCAAG+AGG 0.535490 5_3:-14616828 None:intergenic
GTCGCAACCGACTTAGAAGA+AGG 0.535540 5_3:+14623456 Msa0801020:CDS
GGAATGTTTCGACCCAAAAG+TGG 0.540620 5_3:-14618201 None:intergenic
TGCCTGTCCATCCTTTCCAC+AGG 0.541611 5_3:-14617803 None:intergenic
ACTACGTTATTGAGGGAACA+AGG 0.543366 5_3:+14617771 Msa0801020:CDS
GCCGATGAGATCATATATGT+TGG 0.544460 5_3:+14623806 Msa0801020:three_prime_UTR
GGGCCTTCTGTCCTGTGGAA+AGG 0.544497 5_3:+14617792 Msa0801020:CDS
CTTCTGTCCTGTGGAAAGGA+TGG 0.546940 5_3:+14617796 Msa0801020:CDS
AATATACAAGACTTCTGTGC+TGG 0.548042 5_3:-14617911 None:intergenic
AGGATCATGGCGGCCATGGA+AGG 0.551462 5_3:+14616714 Msa0801020:exon
TTTGGCTATGGTGCTCAAGG+AGG 0.557751 5_3:+14617831 Msa0801020:CDS
ACCGACTTAGAAGAAGGGTC+TGG 0.561530 5_3:+14623462 Msa0801020:CDS
GCATTCCTCCAATGGTGCAA+AGG 0.561781 5_3:-14616773 None:intergenic
GGTTATACCGCTGGATCCGT+TGG 0.563265 5_3:+14619165 Msa0801020:CDS
ATTTGAAGCTGTTAAAGTCA+GGG 0.563948 5_3:+14617983 Msa0801020:CDS
CATCCTTTCCACAGGACAGA+AGG 0.566116 5_3:-14617795 None:intergenic
AGCACTGAGCATTCCTCCAA+TGG 0.567164 5_3:-14616781 None:intergenic
CATGTTTGACGGCTTTCCAA+AGG 0.568484 5_3:+14618034 Msa0801020:CDS
ATTGGAGGAATGCTCAGTGC+TGG 0.571365 5_3:+14616783 Msa0801020:CDS
TGTTCAAAAGCTCAACAGCT+AGG 0.578381 5_3:+14619126 Msa0801020:CDS
AACAAGGGCCTTCTGTCCTG+TGG 0.579264 5_3:+14617787 Msa0801020:CDS
CATTCTAATAGGAAGACTCC+TGG 0.594584 5_3:-14619384 None:intergenic
ATCATGGCGGCCATGGAAGG+AGG 0.596330 5_3:+14616717 Msa0801020:exon
GTGCAAAGGGCATAATACCT+TGG 0.599144 5_3:-14616759 None:intergenic
GTGCTGGTCTACCAATACAT+TGG 0.601303 5_3:-14617895 None:intergenic
TAAGAAGTTCCAACAAAATG+GGG 0.608820 5_3:+14616443 None:intergenic
CCAAAGGTATATGCAGCAGA+AGG 0.616204 5_3:+14618050 Msa0801020:CDS
AAACCTTGCAGGCCAACTAG+TGG 0.616772 5_3:+14623429 Msa0801020:intron
AAATACCAGAACAAGACTCT+CGG 0.618357 5_3:-14619244 None:intergenic
CACGTGAAAGAGTTCAGTGA+AGG 0.621136 5_3:+14616647 Msa0801020:five_prime_UTR
CTACGTTATTGAGGGAACAA+GGG 0.623719 5_3:+14617772 Msa0801020:CDS
GCACAACCTAGTTATGCTAA+GGG 0.624854 5_3:+14618011 Msa0801020:CDS
AGGAGTTGTAGCAAGATGAG+TGG 0.639871 5_3:-14616808 None:intergenic
TCCAACATATATGATCTCAT+CGG 0.642003 5_3:-14623807 None:intergenic
GAATGTTGAGAACATAACCA+TGG 0.644534 5_3:-14619049 None:intergenic
AACATGCCCTTAGCATAACT+AGG 0.649459 5_3:-14618017 None:intergenic
TCGTGTCAGATAGGACAACA+TGG 0.649827 5_3:-14623764 None:intergenic
TCGCAACCGACTTAGAAGAA+GGG 0.656070 5_3:+14623457 Msa0801020:CDS
ATTAGAAACAAAGCTACCAA+CGG 0.659190 5_3:-14619181 None:intergenic
TATTCTACAAACTTAATGAG+AGG 0.660292 5_3:-14623611 None:intergenic
TTCAAGATAAGATAATTGAG+TGG 0.660309 5_3:-14623953 None:intergenic
AAAGCTACCAACGGATCCAG+CGG 0.665155 5_3:-14619172 None:intergenic
CGTGTCAGATAGGACAACAT+GGG 0.666127 5_3:-14623763 None:intergenic
TATGCAGCAGAAGGCGCACG+AGG 0.673682 5_3:+14618059 Msa0801020:CDS
CCAAAAGTGGAACAAGTCCA+CGG 0.677014 5_3:-14618188 None:intergenic
TCGCACAAGAATTAACGCCA+AGG 0.686330 5_3:+14616742 Msa0801020:CDS
GCAACAACATCCAACTCTAG+GGG 0.686433 5_3:+14623727 Msa0801020:three_prime_UTR
AAGAAGTTCCAACAAAATGG+GGG 0.689869 5_3:+14616444 Msa0801020:five_prime_UTR
ATGCAGCAGAAGGCGCACGA+GGG 0.753181 5_3:+14618060 Msa0801020:CDS
ACTGCTTGCAGATTCTACCG+TGG 0.755591 5_3:+14618171 Msa0801020:intron
ACTGAAGAAAAGGATCATGG+CGG 0.768021 5_3:+14616704 Msa0801020:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAGAAATTAAATAAAAAA+TGG - chr5_3:14616879-14616898 None:intergenic 10.0%
!! AAATACTGTAATATTTAATT+GGG - chr5_3:14617740-14617759 None:intergenic 10.0%
!! CATGATTTATTTATTTATTT+AGG + chr5_3:14620479-14620498 Msa0801020:intron 10.0%
!! CAAAATCAAATTATATTATT+TGG + chr5_3:14621858-14621877 Msa0801020:intron 10.0%
!! ATTTCTTTACTTATTTAATT+AGG + chr5_3:14622030-14622049 Msa0801020:intron 10.0%
!! CAAATTATAAAAAAGAATAA+GGG + chr5_3:14622390-14622409 Msa0801020:intron 10.0%
!! ATTTAACATTCAAATTTATT+TGG + chr5_3:14623234-14623253 Msa0801020:intron 10.0%
!! TTTAACATTCAAATTTATTT+GGG + chr5_3:14623235-14623254 Msa0801020:intron 10.0%
!!! TTTTTTTAGTTTGTTTGATT+AGG + chr5_3:14616918-14616937 Msa0801020:intron 15.0%
!!! GAAAAACATTAGTTTTTTTT+TGG + chr5_3:14617173-14617192 Msa0801020:intron 15.0%
!! ATATATTGTTACTAAACATT+AGG - chr5_3:14617302-14617321 None:intergenic 15.0%
!! ATGTTTAGTAACAATATATT+TGG + chr5_3:14617303-14617322 Msa0801020:intron 15.0%
!!! TATTTTGTTACTAAACATTA+GGG - chr5_3:14617378-14617397 None:intergenic 15.0%
!!! AAAACAGATTAGTTTTTTTT+TGG + chr5_3:14617404-14617423 Msa0801020:intron 15.0%
!!! AAACAGATTAGTTTTTTTTT+GGG + chr5_3:14617405-14617424 Msa0801020:intron 15.0%
!! ATAAAAAATGTGGAAAAATT+TGG + chr5_3:14617468-14617487 Msa0801020:intron 15.0%
!! TAAAAAATGTGGAAAAATTT+GGG + chr5_3:14617469-14617488 Msa0801020:intron 15.0%
!! GAAATACTGTAATATTTAAT+TGG - chr5_3:14617741-14617760 None:intergenic 15.0%
!! TAAATATGACTTAAAAGTTT+AGG - chr5_3:14619493-14619512 None:intergenic 15.0%
!!! AATATTTTTGTCATATTGTT+AGG - chr5_3:14620389-14620408 None:intergenic 15.0%
!! TTATTGAATGAATATTAGAA+AGG + chr5_3:14621101-14621120 Msa0801020:intron 15.0%
!! TATTGAATGAATATTAGAAA+GGG + chr5_3:14621102-14621121 Msa0801020:intron 15.0%
!!! TGTCTTTTAATATATTTGTA+GGG - chr5_3:14621207-14621226 None:intergenic 15.0%
!!! AAATTGTAAGCTTTAATTTA+AGG + chr5_3:14621922-14621941 Msa0801020:intron 15.0%
!!! AATTGTAAGCTTTAATTTAA+GGG + chr5_3:14621923-14621942 Msa0801020:intron 15.0%
!! AAATGTGAAACTAATATTAA+GGG - chr5_3:14621994-14622013 None:intergenic 15.0%
!! AAAATGTGAAACTAATATTA+AGG - chr5_3:14621995-14622014 None:intergenic 15.0%
!! TTACTTATTTAATTAGGATT+TGG + chr5_3:14622036-14622055 Msa0801020:intron 15.0%
!! TACTTATTTAATTAGGATTT+GGG + chr5_3:14622037-14622056 Msa0801020:intron 15.0%
!!! CCTTATTCTTTTTTATAATT+TGG - chr5_3:14622392-14622411 None:intergenic 15.0%
!! CCAAATTATAAAAAAGAATA+AGG + chr5_3:14622389-14622408 Msa0801020:intron 15.0%
!!! ATTTTGATTGTTATGTAATA+AGG + chr5_3:14622790-14622809 Msa0801020:intron 15.0%
!!! TTTTGATTGTTATGTAATAA+GGG + chr5_3:14622791-14622810 Msa0801020:intron 15.0%
!! TTAACATTCAAATTTATTTG+GGG + chr5_3:14623236-14623255 Msa0801020:intron 15.0%
!!! TTTGATTAGGTTTTAGAAAT+GGG + chr5_3:14616931-14616950 Msa0801020:intron 20.0%
!! AAACCTATTACTAAACATTA+GGG - chr5_3:14617012-14617031 None:intergenic 20.0%
!! AAAACCTATTACTAAACATT+AGG - chr5_3:14617013-14617032 None:intergenic 20.0%
!! TAAATTGCTACTAAACAATA+GGG - chr5_3:14617144-14617163 None:intergenic 20.0%
!! ATAAATTGCTACTAAACAAT+AGG - chr5_3:14617145-14617164 None:intergenic 20.0%
!!! ATTTGGATAAACAGTTTTTT+TGG + chr5_3:14617320-14617339 Msa0801020:intron 20.0%
!!! TTTGGATAAACAGTTTTTTT+GGG + chr5_3:14617321-14617340 Msa0801020:intron 20.0%
!!! GTATTTTGTTACTAAACATT+AGG - chr5_3:14617379-14617398 None:intergenic 20.0%
!! ATGTTTAGTAACAAAATACA+TGG + chr5_3:14617380-14617399 Msa0801020:intron 20.0%
!!! AACAGATTAGTTTTTTTTTG+GGG + chr5_3:14617406-14617425 Msa0801020:intron 20.0%
!! AAATCATTCTCAAACATAAA+GGG - chr5_3:14617435-14617454 None:intergenic 20.0%
!! AAAATCATTCTCAAACATAA+AGG - chr5_3:14617436-14617455 None:intergenic 20.0%
!! AAGATCAATTCTAAACATTA+GGG - chr5_3:14617665-14617684 None:intergenic 20.0%
!! TTAAATAAAGTTTCAAGAGA+TGG - chr5_3:14618238-14618257 None:intergenic 20.0%
!!! GTTAAAGTATTATTTATCTG+TGG + chr5_3:14619550-14619569 Msa0801020:intron 20.0%
!! ACTTAAATTCAAAATCTACA+AGG + chr5_3:14619833-14619852 Msa0801020:intron 20.0%
!!! ACTTTATTTTCTTGTAAAGT+TGG + chr5_3:14621034-14621053 Msa0801020:intron 20.0%
!!! GTCTTTTAATATATTTGTAG+GGG - chr5_3:14621206-14621225 None:intergenic 20.0%
!!! CTGTCTTTTAATATATTTGT+AGG - chr5_3:14621208-14621227 None:intergenic 20.0%
!!! TATTTAGAGTTATTCAATAG+TGG + chr5_3:14621479-14621498 Msa0801020:intron 20.0%
!!! TTTGATTTTGAAAATTAGCT+GGG - chr5_3:14621848-14621867 None:intergenic 20.0%
!!! ATTTGATTTTGAAAATTAGC+TGG - chr5_3:14621849-14621868 None:intergenic 20.0%
!!! ATTGTAAGCTTTAATTTAAG+GGG + chr5_3:14621924-14621943 Msa0801020:intron 20.0%
!!! GGATTTTTTAAGATTAAAAG+AGG - chr5_3:14622503-14622522 None:intergenic 20.0%
!! TGCTTAACATAGTATATATT+AGG + chr5_3:14622588-14622607 Msa0801020:intron 20.0%
!!! ATGTGAAATTTTGATTGATA+AGG - chr5_3:14622930-14622949 None:intergenic 20.0%
!! CAATCAAAATTTCACATAAA+TGG + chr5_3:14622933-14622952 Msa0801020:intron 20.0%
!!! AATGACACAAATTATTTCTT+TGG - chr5_3:14622986-14623005 None:intergenic 20.0%
!!! AATTTGTGTCATTTATCTTT+TGG + chr5_3:14622993-14623012 Msa0801020:intron 20.0%
!! ACATATAAATGAGTTGTATT+GGG - chr5_3:14623140-14623159 None:intergenic 20.0%
!!! GAGAAAATATTTCTACTTTT+GGG - chr5_3:14623300-14623319 None:intergenic 20.0%
!!! TGAGAAAATATTTCTACTTT+TGG - chr5_3:14623301-14623320 None:intergenic 20.0%
!! ATAAAATCAGAAAATAGAGT+AGG - chr5_3:14623397-14623416 None:intergenic 20.0%
!! AATACTCATTAACATTATCT+TGG + chr5_3:14623983-14624002 Msa0801020:three_prime_UTR 20.0%
!!! TCCACAATTTTTGATATTAT+TGG + chr5_3:14624020-14624039 Msa0801020:three_prime_UTR 20.0%
!! TCCAATAATATCAAAAATTG+TGG - chr5_3:14624024-14624043 None:intergenic 20.0%
! AGAATAAGGAAGAAAATTAG+AGG - chr5_3:14616573-14616592 None:intergenic 25.0%
!! TTCTAGAAAGAGAAAGAATA+AGG - chr5_3:14616587-14616606 None:intergenic 25.0%
!! GATTTTTAACACTGAAGAAA+AGG + chr5_3:14616694-14616713 Msa0801020:five_prime_UTR 25.0%
! TTAACTTTCAAAACATCAAG+AGG - chr5_3:14616831-14616850 None:intergenic 25.0%
!!! GTTTGATTAGGTTTTAGAAA+TGG + chr5_3:14616930-14616949 Msa0801020:intron 25.0%
!!! TTGATTAGGTTTTAGAAATG+GGG + chr5_3:14616932-14616951 Msa0801020:intron 25.0%
! AAATCATACTCAACACAAAA+GGG - chr5_3:14616985-14617004 None:intergenic 25.0%
! AAAATCATACTCAACACAAA+AGG - chr5_3:14616986-14617005 None:intergenic 25.0%
! AAATCACTCTCAAACATAAA+GGG - chr5_3:14617046-14617065 None:intergenic 25.0%
! AAAATCACTCTCAAACATAA+AGG - chr5_3:14617047-14617066 None:intergenic 25.0%
!!! GTGGAAAAGTTGAAATTTTT+TGG + chr5_3:14617087-14617106 Msa0801020:intron 25.0%
! TTGTTTAGTAGCAATTTATG+TGG + chr5_3:14617146-14617165 Msa0801020:intron 25.0%
! TGTTTAGTAGCAATTTATGT+GGG + chr5_3:14617147-14617166 Msa0801020:intron 25.0%
! GTGGGAAAATTGAATATTTA+TGG + chr5_3:14617244-14617263 Msa0801020:intron 25.0%
!! TATTTATGGTTACCCTTTTA+TGG + chr5_3:14617258-14617277 Msa0801020:intron 25.0%
! ATTCATTCTCATCCATAAAA+GGG - chr5_3:14617273-14617292 None:intergenic 25.0%
! AATTCATTCTCATCCATAAA+AGG - chr5_3:14617274-14617293 None:intergenic 25.0%
! ACACTAATGCATAAAAAATG+TGG + chr5_3:14617458-14617477 Msa0801020:intron 25.0%
! CAAGATCAATTCTAAACATT+AGG - chr5_3:14617666-14617685 None:intergenic 25.0%
! TATTTAATCTTGCACTAGTT+AGG + chr5_3:14618251-14618270 Msa0801020:intron 25.0%
! ATTTAATCTTGCACTAGTTA+GGG + chr5_3:14618252-14618271 Msa0801020:intron 25.0%
! TATACTTAAAGATGTTTAGC+TGG + chr5_3:14618374-14618393 Msa0801020:intron 25.0%
! TATACTTAAAGATGTTTAGC+TGG + chr5_3:14618374-14618393 Msa0801020:intron 25.0%
!! TTTCTCTTTGGTATATGTTT+TGG + chr5_3:14618505-14618524 Msa0801020:intron 25.0%
! TTTGGTATCTTTATCATATC+TGG + chr5_3:14618523-14618542 Msa0801020:intron 25.0%
! TATTTGATTGATCAGGTTAT+AGG + chr5_3:14618626-14618645 Msa0801020:intron 25.0%
! ATTTGATTGATCAGGTTATA+GGG + chr5_3:14618627-14618646 Msa0801020:intron 25.0%
!! AAGTATTCAGTCTATTCTTT+TGG + chr5_3:14618731-14618750 Msa0801020:intron 25.0%
!!! AGTATCCTGTTTTTTTTTGT+TGG + chr5_3:14619019-14619038 Msa0801020:intron 25.0%
! CAATGTTGTCAAAAGAAAAA+AGG + chr5_3:14619098-14619117 Msa0801020:CDS 25.0%
!!! ATTGTGTTCCACTTATTTTA+TGG + chr5_3:14619324-14619343 Msa0801020:intron 25.0%
! AGCAAAGTAAAAGACAAAAT+TGG + chr5_3:14619578-14619597 Msa0801020:intron 25.0%
!! TAACTGTTGATTATTGAGTT+TGG + chr5_3:14619646-14619665 Msa0801020:intron 25.0%
!! CTGCGTATTTGTTAAAAAAT+TGG - chr5_3:14619950-14619969 None:intergenic 25.0%
!! AGAGCATATTTTATCTCTTA+AGG + chr5_3:14620430-14620449 Msa0801020:intron 25.0%
! TTGACTCTAGTATTATAGTA+AGG + chr5_3:14620504-14620523 Msa0801020:intron 25.0%
! TGACTCTAGTATTATAGTAA+GGG + chr5_3:14620505-14620524 Msa0801020:intron 25.0%
! TAACTTATAAACACAATACG+AGG - chr5_3:14620590-14620609 None:intergenic 25.0%
! ATTATTAGAGAGTGACAAAT+CGG + chr5_3:14621310-14621329 Msa0801020:intron 25.0%
! TATTTACTAGTCGTATTTGT+AGG - chr5_3:14621589-14621608 None:intergenic 25.0%
! ACTTCAGATTATGATGAATA+TGG - chr5_3:14622465-14622484 None:intergenic 25.0%
! TTAAGTGTAGAAGAAGTTAT+AGG - chr5_3:14622524-14622543 None:intergenic 25.0%
! TATATACTATGTTAAGCAGA+AGG - chr5_3:14622586-14622605 None:intergenic 25.0%
! TGTAATAAGGGAATCAATTT+AGG + chr5_3:14622803-14622822 Msa0801020:intron 25.0%
! GTAATAAGGGAATCAATTTA+GGG + chr5_3:14622804-14622823 Msa0801020:intron 25.0%
! TAATAAGGGAATCAATTTAG+GGG + chr5_3:14622805-14622824 Msa0801020:intron 25.0%
! TTACATATGAGCATAAATGT+TGG + chr5_3:14622898-14622917 Msa0801020:intron 25.0%
!!! AGAGTAGTTTTGTTGAAATA+CGG + chr5_3:14623031-14623050 Msa0801020:intron 25.0%
! CACATATAAATGAGTTGTAT+TGG - chr5_3:14623141-14623160 None:intergenic 25.0%
!!! TAAATATTTTGAAACCTTGC+AGG + chr5_3:14623418-14623437 Msa0801020:intron 25.0%
! TATTCTACAAACTTAATGAG+AGG - chr5_3:14623614-14623633 None:intergenic 25.0%
! CTCATTAAGTTTGTAGAATA+TGG + chr5_3:14623614-14623633 Msa0801020:three_prime_UTR 25.0%
! TTCAAGATAAGATAATTGAG+TGG - chr5_3:14623956-14623975 None:intergenic 25.0%
!!! TGTTTTGAAAGTTAACATGC+AGG + chr5_3:14616836-14616855 Msa0801020:CDS 30.0%
GTACCCTAATGTTTAGTAAT+AGG + chr5_3:14617006-14617025 Msa0801020:intron 30.0%
! ACACTAATGGACAAAATATG+TGG + chr5_3:14617068-14617087 Msa0801020:intron 30.0%
!!! ATTTTTTGGCTAACCTTTCA+TGG + chr5_3:14617101-14617120 Msa0801020:intron 30.0%
AAATCATTCTCATCCATGAA+AGG - chr5_3:14617117-14617136 None:intergenic 30.0%
! TTCATGGATGAGAATGATTT+TGG + chr5_3:14617117-14617136 Msa0801020:intron 30.0%
ACATAACTCTCAAGCATAAA+GGG - chr5_3:14617202-14617221 None:intergenic 30.0%
AACATAACTCTCAAGCATAA+AGG - chr5_3:14617203-14617222 None:intergenic 30.0%
AGAGTTATGTTTCACACTAA+TGG + chr5_3:14617212-14617231 Msa0801020:intron 30.0%
! ACACTAATGGACAAAAAATG+TGG + chr5_3:14617225-14617244 Msa0801020:intron 30.0%
! CACTAATGGACAAAAAATGT+GGG + chr5_3:14617226-14617245 Msa0801020:intron 30.0%
! GTGGAAAACTTGACTATTTT+TGG + chr5_3:14617613-14617632 Msa0801020:intron 30.0%
TGGAAAATCATTCTCACAAA+GGG - chr5_3:14617642-14617661 None:intergenic 30.0%
ATCAATTCTAAACATTAGGG+TGG - chr5_3:14617662-14617681 None:intergenic 30.0%
GTTCGCGTTATCATATTTAA+TGG + chr5_3:14617685-14617704 Msa0801020:intron 30.0%
! TGGTCTCTACGAATATTTTA+AGG + chr5_3:14617863-14617882 Msa0801020:CDS 30.0%
!! GGTCTCTACGAATATTTTAA+GGG + chr5_3:14617864-14617883 Msa0801020:CDS 30.0%
AAATGGACATAGAGCTAAAT+TGG - chr5_3:14617967-14617986 None:intergenic 30.0%
! ATTTGAAGCTGTTAAAGTCA+GGG + chr5_3:14617983-14618002 Msa0801020:CDS 30.0%
AAAGATGTTTAGCTGGAAAT+TGG + chr5_3:14618381-14618400 Msa0801020:intron 30.0%
ATATACCAAAGAGAAAAGCA+AGG - chr5_3:14618501-14618520 None:intergenic 30.0%
AAAATTTCCAGACACTAAGT+AGG - chr5_3:14618549-14618568 None:intergenic 30.0%
GAGAAACTATTTGATTGATC+AGG + chr5_3:14618619-14618638 Msa0801020:intron 30.0%
! TTGTTAGTTTATCAACCAAC+TGG - chr5_3:14618662-14618681 None:intergenic 30.0%
!! AACTTCTTTAAAGCTAAGCA+TGG + chr5_3:14618836-14618855 Msa0801020:intron 30.0%
ACTGTCCAACAAAAAAAAAC+AGG - chr5_3:14619027-14619046 None:intergenic 30.0%
TGTTGTCAAAAGAAAAAAGG+AGG + chr5_3:14619101-14619120 Msa0801020:CDS 30.0%
ATTAGAAACAAAGCTACCAA+CGG - chr5_3:14619184-14619203 None:intergenic 30.0%
TTGCTTCTTTGCAATTCATT+TGG + chr5_3:14619265-14619284 Msa0801020:intron 30.0%
AAGACTCCTGGTAAATAAAT+TGG - chr5_3:14619375-14619394 None:intergenic 30.0%
AACCATTGCAAAGTTATAGA+AGG - chr5_3:14619422-14619441 None:intergenic 30.0%
! TACGACACTATCAAAGTTTT+AGG + chr5_3:14619446-14619465 Msa0801020:CDS 30.0%
! TCAAAATCGAGATTTTGCTT+AGG + chr5_3:14619699-14619718 Msa0801020:intron 30.0%
AAGTGTTTGTAGTGATTGAA+AGG - chr5_3:14619807-14619826 None:intergenic 30.0%
! GTGTAATACTACTTTAGCTT+AGG - chr5_3:14619889-14619908 None:intergenic 30.0%
!!! CCTATTTTTGTGGATGAAAA+TGG - chr5_3:14620058-14620077 None:intergenic 30.0%
! CCATTTTCATCCACAAAAAT+AGG + chr5_3:14620055-14620074 Msa0801020:intron 30.0%
!!! TGCTAGAAAACCTATTTTTG+TGG - chr5_3:14620068-14620087 None:intergenic 30.0%
!! CAATCAGCAATCATTTTTGT+GGG - chr5_3:14620110-14620129 None:intergenic 30.0%
!! TCAATCAGCAATCATTTTTG+TGG - chr5_3:14620111-14620130 None:intergenic 30.0%
! AGATTTTATGACGCTCAATT+TGG - chr5_3:14620206-14620225 None:intergenic 30.0%
AAAAGACTAGTACATTAGGT+GGG - chr5_3:14620338-14620357 None:intergenic 30.0%
!!! ACCTAATGTACTAGTCTTTT+GGG + chr5_3:14620338-14620357 Msa0801020:intron 30.0%
TATTGATATTGTCTCAGTTG+CGG + chr5_3:14620731-14620750 Msa0801020:intron 30.0%
CACAACTAAGACAAAAACAA+TGG - chr5_3:14620820-14620839 None:intergenic 30.0%
!!! TGTTGTTTTTGTCTTAGTTG+TGG + chr5_3:14620838-14620857 Msa0801020:intron 30.0%
!!! GTGGACACATTTAGTTTTTA+AGG + chr5_3:14620880-14620899 Msa0801020:intron 30.0%
AACAAGAATCAATTTGACGA+CGG - chr5_3:14620907-14620926 None:intergenic 30.0%
AATATTAGAAAGGGATCCTT+AGG + chr5_3:14621111-14621130 Msa0801020:intron 30.0%
TTATTAGAGAGTGACAAATC+GGG + chr5_3:14621311-14621330 Msa0801020:intron 30.0%
TTAGAGTTATTCAATAGTGG+AGG + chr5_3:14621482-14621501 Msa0801020:intron 30.0%
TTTGTAGGTTTAGACTAATC+TGG - chr5_3:14621574-14621593 None:intergenic 30.0%
TTCAATCGGATATTCAGATA+TGG + chr5_3:14621642-14621661 Msa0801020:intron 30.0%
!! AAGAAGCACTAAATGACTTA+CGG - chr5_3:14621694-14621713 None:intergenic 30.0%
TCTTCATTCTTTGTTCCATT+AGG + chr5_3:14621710-14621729 Msa0801020:intron 30.0%
CTTCATTCTTTGTTCCATTA+GGG + chr5_3:14621711-14621730 Msa0801020:intron 30.0%
ATGTGATATGGGTTTATAAG+TGG + chr5_3:14622314-14622333 Msa0801020:intron 30.0%
AAGATTAAAAGAGGAGAGAA+AGG - chr5_3:14622494-14622513 None:intergenic 30.0%
TTCTTCTACACTTAATAGAC+TGG + chr5_3:14622529-14622548 Msa0801020:intron 30.0%
!!! GCAATGTTATTTTTTCGTGA+AGG + chr5_3:14622827-14622846 Msa0801020:intron 30.0%
!!! GAGTAGTTTTGTTGAAATAC+GGG + chr5_3:14623032-14623051 Msa0801020:intron 30.0%
AATCAGAAAATAGAGTAGGA+GGG - chr5_3:14623393-14623412 None:intergenic 30.0%
AAATCAGAAAATAGAGTAGG+AGG - chr5_3:14623394-14623413 None:intergenic 30.0%
TGGTTCAGAAAACTCAAAAA+AGG + chr5_3:14623634-14623653 Msa0801020:three_prime_UTR 30.0%
CAGAAAACTCAAAAAAGGTT+TGG + chr5_3:14623639-14623658 Msa0801020:three_prime_UTR 30.0%
!! ATATTTTTGAGCTTAGCTAG+TGG + chr5_3:14623676-14623695 Msa0801020:three_prime_UTR 30.0%
TCCAACATATATGATCTCAT+CGG - chr5_3:14623810-14623829 None:intergenic 30.0%
TCAGTATGATACATTACTTC+TGG - chr5_3:14623840-14623859 None:intergenic 30.0%
!!! CAAGTTACCATTTTTGGTTT+TGG + chr5_3:14623911-14623930 Msa0801020:three_prime_UTR 30.0%
AAGAAGTTCCAACAAAATGG+GGG + chr5_3:14616444-14616463 Msa0801020:five_prime_UTR 35.0%
TGAGGCAATTAACATTAAGC+AGG + chr5_3:14616481-14616500 Msa0801020:five_prime_UTR 35.0%
GAGTTCAGTGAAGGAATAAA+TGG + chr5_3:14616656-14616675 Msa0801020:five_prime_UTR 35.0%
AACACTGAAGAAAAGGATCA+TGG + chr5_3:14616701-14616720 Msa0801020:exon 35.0%
TTGAAAGTTAACATGCAGGT+TGG + chr5_3:14616840-14616859 Msa0801020:intron 35.0%
AAATGGGGAAGTGGAAAAAT+TGG + chr5_3:14616947-14616966 Msa0801020:intron 35.0%
! GAGAGTGATTTTCACACTAA+TGG + chr5_3:14617055-14617074 Msa0801020:intron 35.0%
TAGTAGCAATTTATGTGGGA+TGG + chr5_3:14617151-14617170 Msa0801020:intron 35.0%
AGCTGAACTCTTAGATTATC+AGG + chr5_3:14617549-14617568 Msa0801020:intron 35.0%
GCTGAACTCTTAGATTATCA+GGG + chr5_3:14617550-14617569 Msa0801020:intron 35.0%
GGTTAAGACAGAACAAAATG+TGG + chr5_3:14617594-14617613 Msa0801020:intron 35.0%
GTGGAAAATCATTCTCACAA+AGG - chr5_3:14617643-14617662 None:intergenic 35.0%
CGCGTTATCATATTTAATGG+AGG + chr5_3:14617688-14617707 Msa0801020:intron 35.0%
GAAGTGATGTTGTTACATGT+AGG + chr5_3:14617710-14617729 Msa0801020:intron 35.0%
GTGCTTTACTACGTTATTGA+GGG + chr5_3:14617764-14617783 Msa0801020:CDS 35.0%
AATATACAAGACTTCTGTGC+TGG - chr5_3:14617914-14617933 None:intergenic 35.0%
CTGACTTTAACAGCTTCAAA+TGG - chr5_3:14617984-14618003 None:intergenic 35.0%
! CATTTGAAGCTGTTAAAGTC+AGG + chr5_3:14617982-14618001 Msa0801020:CDS 35.0%
CTTGATGTGCATCTATCTTT+AGG + chr5_3:14618114-14618133 Msa0801020:intron 35.0%
CAAGAGATGGTGAAATTACA+TGG - chr5_3:14618225-14618244 None:intergenic 35.0%
CATGAACACTATCTTTATGC+TGG + chr5_3:14618307-14618326 Msa0801020:intron 35.0%
TTATTGTTAGTCACATGCTG+AGG + chr5_3:14618593-14618612 Msa0801020:intron 35.0%
CACTATTACAACATAGTCAC+AGG - chr5_3:14618779-14618798 None:intergenic 35.0%
GAGTGTTCAGTATATTCTTC+TGG + chr5_3:14618860-14618879 Msa0801020:intron 35.0%
!! TTTTGACTAAGTTCCTGTGA+TGG + chr5_3:14618917-14618936 Msa0801020:intron 35.0%
ACAAATTTCATCACCATCAC+AGG - chr5_3:14618933-14618952 None:intergenic 35.0%
! TTTTTGTTGGACAGTTTCCA+TGG + chr5_3:14619032-14619051 Msa0801020:intron 35.0%
GAATGTTGAGAACATAACCA+TGG - chr5_3:14619052-14619071 None:intergenic 35.0%
GAAGCTACTATATTATCAGC+AGG - chr5_3:14619207-14619226 None:intergenic 35.0%
AAATACCAGAACAAGACTCT+CGG - chr5_3:14619247-14619266 None:intergenic 35.0%
!!! TGTTCCACTTATTTTATGGC+AGG + chr5_3:14619328-14619347 Msa0801020:intron 35.0%
ATAGCCTGCCATAAAATAAG+TGG - chr5_3:14619335-14619354 None:intergenic 35.0%
TCTTCCTATTAGAATGTTGC+TGG + chr5_3:14619391-14619410 Msa0801020:CDS 35.0%
GTCCTTCTATAACTTTGCAA+TGG + chr5_3:14619417-14619436 Msa0801020:CDS 35.0%
!!! GACACTATCAAAGTTTTAGG+CGG + chr5_3:14619449-14619468 Msa0801020:CDS 35.0%
TGCAACAGAGCAAACTATAA+AGG - chr5_3:14619518-14619537 None:intergenic 35.0%
GAAGTGAACCTTAATGTTAG+AGG + chr5_3:14619668-14619687 Msa0801020:intron 35.0%
CTACTTTGCCTCTAACATTA+AGG - chr5_3:14619679-14619698 None:intergenic 35.0%
! ATCGAGATTTTGCTTAGGAT+CGG + chr5_3:14619704-14619723 Msa0801020:intron 35.0%
! ATTTTGCTTAGGATCGGAAA+GGG + chr5_3:14619710-14619729 Msa0801020:intron 35.0%
GCTGCTTAACAACTCTAAAT+AGG + chr5_3:14619909-14619928 Msa0801020:intron 35.0%
!! AAATAGGTTTTCTAGCAACC+AGG + chr5_3:14620071-14620090 Msa0801020:intron 35.0%
TTTATGACGCTCAATTTGGT+AGG - chr5_3:14620202-14620221 None:intergenic 35.0%
AAAAATCACGATCTTGACTG+TGG + chr5_3:14620287-14620306 Msa0801020:intron 35.0%
TGTGGTTAGAAGATATGTGT+TGG + chr5_3:14620305-14620324 Msa0801020:intron 35.0%
GTGGTTAGAAGATATGTGTT+GGG + chr5_3:14620306-14620325 Msa0801020:intron 35.0%
CAAAAGACTAGTACATTAGG+TGG - chr5_3:14620339-14620358 None:intergenic 35.0%
!!! CACCTAATGTACTAGTCTTT+TGG + chr5_3:14620337-14620356 Msa0801020:intron 35.0%
ACCCAAAAGACTAGTACATT+AGG - chr5_3:14620342-14620361 None:intergenic 35.0%
!!! AATGTACTAGTCTTTTGGGT+CGG + chr5_3:14620342-14620361 Msa0801020:intron 35.0%
ATACGAGGATAACATAACAG+AGG - chr5_3:14620575-14620594 None:intergenic 35.0%
ATGCCAAAAAGATCACACAA+TGG - chr5_3:14620617-14620636 None:intergenic 35.0%
!!! AATTGGTTTTGTCTCAGTTG+CGG + chr5_3:14620759-14620778 Msa0801020:intron 35.0%
!! TGCAATGGTATTTTTGTGTG+TGG + chr5_3:14620784-14620803 Msa0801020:intron 35.0%
AAACTAAATGTGTCCACCAA+TGG - chr5_3:14620877-14620896 None:intergenic 35.0%
GACGAAGAAACAAGCAATAA+AGG + chr5_3:14620948-14620967 Msa0801020:intron 35.0%
TGCATCATTTACTTCCATCA+AGG - chr5_3:14620979-14620998 None:intergenic 35.0%
CTTTGTTCTTTCTTCCTCAA+AGG - chr5_3:14621010-14621029 None:intergenic 35.0%
AGGATAAAGGTTCAATCCTA+AGG - chr5_3:14621130-14621149 None:intergenic 35.0%
ATTGAACCTTTATCCTCAAG+TGG + chr5_3:14621134-14621153 Msa0801020:intron 35.0%
TTGAACCTTTATCCTCAAGT+GGG + chr5_3:14621135-14621154 Msa0801020:intron 35.0%
!!! ACTATTTCGTTTTGGAGAAG+AGG + chr5_3:14621159-14621178 Msa0801020:intron 35.0%
!!! CTATTTCGTTTTGGAGAAGA+GGG + chr5_3:14621160-14621179 Msa0801020:intron 35.0%
TAGGACTCATCTTAAGAGTA+AGG + chr5_3:14621335-14621354 Msa0801020:intron 35.0%
!!! CCTAGTAATCTCCTTGTTTT+GGG - chr5_3:14621458-14621477 None:intergenic 35.0%
!! ACCTAGTAATCTCCTTGTTT+TGG - chr5_3:14621459-14621478 None:intergenic 35.0%
TCTATTAAAGTAGCACCTAC+TGG + chr5_3:14621515-14621534 Msa0801020:intron 35.0%
ACATCACGTAACTCTTCAAT+CGG + chr5_3:14621628-14621647 Msa0801020:intron 35.0%
!! AGAAGCACTAAATGACTTAC+GGG - chr5_3:14621693-14621712 None:intergenic 35.0%
! TAGGATTTGGGATCTTGTAT+TGG + chr5_3:14622049-14622068 Msa0801020:intron 35.0%
TCGATCCAATCTGAATTCTA+AGG + chr5_3:14622177-14622196 Msa0801020:intron 35.0%
! ATCCAATCTGAATTCTAAGG+CGG + chr5_3:14622180-14622199 Msa0801020:intron 35.0%
TCCCATATTGGATGTGATAT+GGG + chr5_3:14622303-14622322 Msa0801020:intron 35.0%
ACCCATATCACATCCAATAT+GGG - chr5_3:14622307-14622326 None:intergenic 35.0%
AACCCATATCACATCCAATA+TGG - chr5_3:14622308-14622327 None:intergenic 35.0%
GTTAAGCAGAAGGTAATTGA+TGG - chr5_3:14622576-14622595 None:intergenic 35.0%
! GTGAAGGCATGTTTATTTGA+TGG + chr5_3:14622843-14622862 Msa0801020:intron 35.0%
CTAAACATGAACAAGCTATG+AGG - chr5_3:14623076-14623095 None:intergenic 35.0%
!! CTCATAGCTTGTTCATGTTT+AGG + chr5_3:14623074-14623093 Msa0801020:intron 35.0%
!! TAGCTTGTTCATGTTTAGGT+TGG + chr5_3:14623078-14623097 Msa0801020:intron 35.0%
! AGCTTGTTCATGTTTAGGTT+GGG + chr5_3:14623079-14623098 Msa0801020:intron 35.0%
TTAGTTGTCCATGTAACAAG+CGG + chr5_3:14623109-14623128 Msa0801020:intron 35.0%
ATCAGAAAATAGAGTAGGAG+GGG - chr5_3:14623392-14623411 None:intergenic 35.0%
CAAAAAAGGTTTGGATGAGA+TGG + chr5_3:14623648-14623667 Msa0801020:three_prime_UTR 35.0%
GTTGTTGCATTCACAAGAAT+TGG - chr5_3:14623715-14623734 None:intergenic 35.0%
ACTAATCTTTCGTGTCAGAT+AGG - chr5_3:14623776-14623795 None:intergenic 35.0%
TTTATTAGCAATGCTTGTGC+TGG + chr5_3:14623888-14623907 Msa0801020:three_prime_UTR 35.0%
AGTATGGCCAAAACCAAAAA+TGG - chr5_3:14623921-14623940 None:intergenic 35.0%
! AAAGAATGCCCCCATTTTGT+TGG - chr5_3:14616455-14616474 None:intergenic 40.0%
ACTGAAGAAAAGGATCATGG+CGG + chr5_3:14616704-14616723 Msa0801020:exon 40.0%
TATTATGCCCTTTGCACCAT+TGG + chr5_3:14616765-14616784 Msa0801020:CDS 40.0%
!!! AGGTTTTAGAAATGGGGAAG+TGG + chr5_3:14616938-14616957 Msa0801020:intron 40.0%
!!! TTTTTTTGGGCTGCCCTTAT+AGG + chr5_3:14617334-14617353 Msa0801020:intron 40.0%
AATCACTCCCAGACCTATAA+GGG - chr5_3:14617350-14617369 None:intergenic 40.0%
AAATCACTCCCAGACCTATA+AGG - chr5_3:14617351-14617370 None:intergenic 40.0%
TTTCTGAGTTTGAACCTGAC+TGG + chr5_3:14617494-14617513 Msa0801020:intron 40.0%
AACCTGACTGGAACAATCAT+TGG + chr5_3:14617506-14617525 Msa0801020:intron 40.0%
TGACTGGAACAATCATTGGT+CGG + chr5_3:14617510-14617529 Msa0801020:intron 40.0%
AATCTAAGAGTTCAGCTGAG+AGG - chr5_3:14617546-14617565 None:intergenic 40.0%
CGTGCTTTACTACGTTATTG+AGG + chr5_3:14617763-14617782 Msa0801020:CDS 40.0%
ACTACGTTATTGAGGGAACA+AGG + chr5_3:14617771-14617790 Msa0801020:CDS 40.0%
CTACGTTATTGAGGGAACAA+GGG + chr5_3:14617772-14617791 Msa0801020:CDS 40.0%
GGGAGTTTACTCCAATGTAT+TGG + chr5_3:14617884-14617903 Msa0801020:CDS 40.0%
AGCACAACCTAGTTATGCTA+AGG + chr5_3:14618010-14618029 Msa0801020:CDS 40.0%
GCACAACCTAGTTATGCTAA+GGG + chr5_3:14618011-14618030 Msa0801020:CDS 40.0%
AACATGCCCTTAGCATAACT+AGG - chr5_3:14618020-14618039 None:intergenic 40.0%
! TATGCTAAGGGCATGTTTGA+CGG + chr5_3:14618023-14618042 Msa0801020:CDS 40.0%
!! TTACGCCTTGCTTTTCTCTT+TGG + chr5_3:14618493-14618512 Msa0801020:intron 40.0%
! ATAGGGCATTAGTTACCAGT+TGG + chr5_3:14618644-14618663 Msa0801020:intron 40.0%
TGTTCAAAAGCTCAACAGCT+AGG + chr5_3:14619126-14619145 Msa0801020:CDS 40.0%
TGGCAGGCTATCAGAAAAAT+TGG + chr5_3:14619344-14619363 Msa0801020:intron 40.0%
GGCAGGCTATCAGAAAAATT+GGG + chr5_3:14619345-14619364 Msa0801020:intron 40.0%
! GGCTAGCCAATTTATTTACC+AGG + chr5_3:14619366-14619385 Msa0801020:CDS 40.0%
CATTCTAATAGGAAGACTCC+TGG - chr5_3:14619387-14619406 None:intergenic 40.0%
CCAACCAGCAACATTCTAAT+AGG - chr5_3:14619398-14619417 None:intergenic 40.0%
CCTATTAGAATGTTGCTGGT+TGG + chr5_3:14619395-14619414 Msa0801020:CDS 40.0%
! GATTTTGCTTAGGATCGGAA+AGG + chr5_3:14619709-14619728 Msa0801020:intron 40.0%
! TTTTGCTTAGGATCGGAAAG+GGG + chr5_3:14619711-14619730 Msa0801020:intron 40.0%
GAGTGAAGATCGTAAGTTGT+GGG + chr5_3:14619733-14619752 Msa0801020:intron 40.0%
AAGGTTGAGAAAGAGAGAGT+TGG - chr5_3:14619788-14619807 None:intergenic 40.0%
AAATACGCAGAGATGTGCAA+GGG + chr5_3:14619960-14619979 Msa0801020:intron 40.0%
TGAAAATGGAAGCCCTAACA+CGG - chr5_3:14620044-14620063 None:intergenic 40.0%
AGGTTGTAGTGCTTGTAAGT+AGG - chr5_3:14620182-14620201 None:intergenic 40.0%
GTTAGAAGATATGTGTTGGG+AGG + chr5_3:14620309-14620328 Msa0801020:intron 40.0%
!!! ATGTACTAGTCTTTTGGGTC+GGG + chr5_3:14620343-14620362 Msa0801020:intron 40.0%
CCAAAAAGATCACACAATGG+AGG - chr5_3:14620614-14620633 None:intergenic 40.0%
! CCTCCATTGTGTGATCTTTT+TGG + chr5_3:14620611-14620630 Msa0801020:intron 40.0%
!!! TCTCAGTTGCGGTTTTGAAT+TGG + chr5_3:14620742-14620761 Msa0801020:intron 40.0%
! TGGTTTGTGAAGTGATCCAT+TGG + chr5_3:14620858-14620877 Msa0801020:intron 40.0%
TTTGTGAAGTGATCCATTGG+TGG + chr5_3:14620861-14620880 Msa0801020:intron 40.0%
CAATAAAGGTTCTGCCTTGA+TGG + chr5_3:14620962-14620981 Msa0801020:intron 40.0%
! GATGCAATTGACTTCCTTTG+AGG + chr5_3:14620993-14621012 Msa0801020:intron 40.0%
! AAGTGGGCACTATTTCGTTT+TGG + chr5_3:14621151-14621170 Msa0801020:intron 40.0%
AAGGATGCTGATACGAATCA+AGG + chr5_3:14621354-14621373 Msa0801020:intron 40.0%
AGGATGCTGATACGAATCAA+GGG + chr5_3:14621355-14621374 Msa0801020:intron 40.0%
ATGCTCTCACAAACTCACAA+AGG + chr5_3:14621405-14621424 Msa0801020:intron 40.0%
TCATTCGAAGTCCCAAAACA+AGG + chr5_3:14621444-14621463 Msa0801020:intron 40.0%
CCCAAAACAAGGAGATTACT+AGG + chr5_3:14621455-14621474 Msa0801020:intron 40.0%
! GACTAATCTGGCTTCTATCA+TGG - chr5_3:14621562-14621581 None:intergenic 40.0%
TTTGTTCCATTAGGGCGTAT+TGG + chr5_3:14621719-14621738 Msa0801020:intron 40.0%
TTGTTCCATTAGGGCGTATT+GGG + chr5_3:14621720-14621739 Msa0801020:intron 40.0%
CATCTGTCTTAGCTGCAATT+TGG + chr5_3:14621793-14621812 Msa0801020:intron 40.0%
TAGCTGGGACAAATCACATA+TGG - chr5_3:14621833-14621852 None:intergenic 40.0%
!! GGAGGAGGGTGTTTATAAAT+GGG + chr5_3:14622113-14622132 Msa0801020:intron 40.0%
CCTCACAAAATAGGCTTGTA+AGG - chr5_3:14622151-14622170 None:intergenic 40.0%
! CCTTACAAGCCTATTTTGTG+AGG + chr5_3:14622148-14622167 Msa0801020:intron 40.0%
CGAACTCAACCTCACAAAAT+AGG - chr5_3:14622160-14622179 None:intergenic 40.0%
TACCGCCTTAGAATTCAGAT+TGG - chr5_3:14622185-14622204 None:intergenic 40.0%
TCCGTTGGACCAATTGTAAT+CGG + chr5_3:14622222-14622241 Msa0801020:intron 40.0%
ATGTCTATTCCTAGCCATGA+GGG + chr5_3:14622266-14622285 Msa0801020:intron 40.0%
ATGTGTTGAGAGTCCCATAT+TGG + chr5_3:14622291-14622310 Msa0801020:intron 40.0%
GTCCCATATTGGATGTGATA+TGG + chr5_3:14622302-14622321 Msa0801020:intron 40.0%
GAAGACATATGTCACCTTTC+AGG + chr5_3:14622336-14622355 Msa0801020:intron 40.0%
CTAACTCAACCCCATAAAAC+CGG - chr5_3:14622362-14622381 None:intergenic 40.0%
GTAACCACTGTTTGTGCTTT+CGG + chr5_3:14622658-14622677 Msa0801020:intron 40.0%
ATATAGGTCGATTGACACAG+TGG - chr5_3:14622708-14622727 None:intergenic 40.0%
! TTGCGTTCAGAGCTTTTCTT+TGG + chr5_3:14622756-14622775 Msa0801020:intron 40.0%
TGTTGAAATACGGGTCAAAC+TGG + chr5_3:14623041-14623060 Msa0801020:intron 40.0%
TAGTTGTCCATGTAACAAGC+GGG + chr5_3:14623110-14623129 Msa0801020:intron 40.0%
ATTTATATGTGCTAGCCCAC+TGG + chr5_3:14623150-14623169 Msa0801020:intron 40.0%
!!! GGAGGGGAGTAATTTTTTGT+TGG - chr5_3:14623376-14623395 None:intergenic 40.0%
!!! CTGCAGTCACACTTTTTTGT+TGG + chr5_3:14623504-14623523 Msa0801020:three_prime_UTR 40.0%
ATGCAACAACATCCAACTCT+AGG + chr5_3:14623725-14623744 Msa0801020:three_prime_UTR 40.0%
TGCAACAACATCCAACTCTA+GGG + chr5_3:14623726-14623745 Msa0801020:three_prime_UTR 40.0%
GCCGATGAGATCATATATGT+TGG + chr5_3:14623806-14623825 Msa0801020:three_prime_UTR 40.0%
! TGCTGGCAAGTTACCATTTT+TGG + chr5_3:14623905-14623924 Msa0801020:three_prime_UTR 40.0%
!!! TTGGTTTTGGCCATACTTCT+TGG + chr5_3:14623924-14623943 Msa0801020:three_prime_UTR 40.0%
!! GGGGCATTCTTTGACTTTTG+AGG + chr5_3:14616463-14616482 Msa0801020:five_prime_UTR 45.0%
CACGTGAAAGAGTTCAGTGA+AGG + chr5_3:14616647-14616666 Msa0801020:five_prime_UTR 45.0%
TCGCACAAGAATTAACGCCA+AGG + chr5_3:14616742-14616761 Msa0801020:CDS 45.0%
! GTGCAAAGGGCATAATACCT+TGG - chr5_3:14616762-14616781 None:intergenic 45.0%
CATTCCTCCAATGGTGCAAA+GGG - chr5_3:14616775-14616794 None:intergenic 45.0%
AGGAGTTGTAGCAAGATGAG+TGG - chr5_3:14616811-14616830 None:intergenic 45.0%
GACCAATGATTGTTCCAGTC+AGG - chr5_3:14617511-14617530 None:intergenic 45.0%
ATTATCAGGGCCGTTTCTCT+AGG + chr5_3:14617563-14617582 Msa0801020:intron 45.0%
ACAGGCAAGTTCTTTGGCTA+TGG + chr5_3:14617819-14617838 Msa0801020:CDS 45.0%
TTCTTTGGCTATGGTGCTCA+AGG + chr5_3:14617828-14617847 Msa0801020:CDS 45.0%
! GTGCTGGTCTACCAATACAT+TGG - chr5_3:14617898-14617917 None:intergenic 45.0%
CATGTTTGACGGCTTTCCAA+AGG + chr5_3:14618034-14618053 Msa0801020:CDS 45.0%
CCTTCTGCTGCATATACCTT+TGG - chr5_3:14618053-14618072 None:intergenic 45.0%
! CCAAAGGTATATGCAGCAGA+AGG + chr5_3:14618050-14618069 Msa0801020:CDS 45.0%
CCAAAAGTGGAACAAGTCCA+CGG - chr5_3:14618191-14618210 None:intergenic 45.0%
!! CGTGGACTTGTTCCACTTTT+GGG + chr5_3:14618189-14618208 Msa0801020:CDS 45.0%
GGAATGTTTCGACCCAAAAG+TGG - chr5_3:14618204-14618223 None:intergenic 45.0%
TATCTGGCCTACTTAGTGTC+TGG + chr5_3:14618539-14618558 Msa0801020:intron 45.0%
CTAGGTGTGACATGTTTAGC+TGG + chr5_3:14619144-14619163 Msa0801020:CDS 45.0%
TGTTTAGCTGGTTATACCGC+TGG + chr5_3:14619156-14619175 Msa0801020:CDS 45.0%
!! AAAAGCCGAGAGTCTTGTTC+TGG + chr5_3:14619239-14619258 Msa0801020:CDS 45.0%
GGAGTGAAGATCGTAAGTTG+TGG + chr5_3:14619732-14619751 Msa0801020:intron 45.0%
CAAATACGCAGAGATGTGCA+AGG + chr5_3:14619959-14619978 Msa0801020:intron 45.0%
GTCTTAGAGTTGAGAGAGAG+AGG + chr5_3:14619989-14620008 Msa0801020:intron 45.0%
TTAGAGTTGAGAGAGAGAGG+TGG + chr5_3:14619992-14620011 Msa0801020:intron 45.0%
TAGAGTTGAGAGAGAGAGGT+GGG + chr5_3:14619993-14620012 Msa0801020:intron 45.0%
GAAAATGGAAGCCCTAACAC+GGG - chr5_3:14620043-14620062 None:intergenic 45.0%
GTAGTGCTTGTAAGTAGGAC+CGG - chr5_3:14620177-14620196 None:intergenic 45.0%
TAGTGCCCACTTGAGGATAA+AGG - chr5_3:14621143-14621162 None:intergenic 45.0%
AACGAAATAGTGCCCACTTG+AGG - chr5_3:14621150-14621169 None:intergenic 45.0%
AGAGAGTGACAAATCGGGTT+AGG + chr5_3:14621316-14621335 Msa0801020:intron 45.0%
ATGCTGATACGAATCAAGGG+TGG + chr5_3:14621358-14621377 Msa0801020:intron 45.0%
CTGAGCTTGAATTTGCCAGT+AGG - chr5_3:14621533-14621552 None:intergenic 45.0%
TTCCTAGGTCTCCATCAGTT+AGG + chr5_3:14621744-14621763 Msa0801020:intron 45.0%
ATTGATGCCAGCCTAACTGA+TGG - chr5_3:14621758-14621777 None:intergenic 45.0%
GGACATATCACATCCAGTGT+GGG - chr5_3:14622088-14622107 None:intergenic 45.0%
TGGACATATCACATCCAGTG+TGG - chr5_3:14622089-14622108 None:intergenic 45.0%
ACACTGGATGTGATATGTCC+AGG + chr5_3:14622088-14622107 Msa0801020:intron 45.0%
TGGATGTGATATGTCCAGGA+GGG + chr5_3:14622092-14622111 Msa0801020:intron 45.0%
!! GGGAGGAGGGTGTTTATAAA+TGG + chr5_3:14622112-14622131 Msa0801020:intron 45.0%
AGAGACTATCCTAGATCCGT+TGG + chr5_3:14622207-14622226 Msa0801020:intron 45.0%
ACAATTGGTCCAACGGATCT+AGG - chr5_3:14622219-14622238 None:intergenic 45.0%
CCCGATTACAATTGGTCCAA+CGG - chr5_3:14622226-14622245 None:intergenic 45.0%
CCGTTGGACCAATTGTAATC+GGG + chr5_3:14622223-14622242 Msa0801020:intron 45.0%
CCAATTGTAATCGGGCTACT+CGG + chr5_3:14622231-14622250 Msa0801020:intron 45.0%
CAATTGTAATCGGGCTACTC+GGG + chr5_3:14622232-14622251 Msa0801020:intron 45.0%
GATGTCTATTCCTAGCCATG+AGG + chr5_3:14622265-14622284 Msa0801020:intron 45.0%
TGTCTATTCCTAGCCATGAG+GGG + chr5_3:14622267-14622286 Msa0801020:intron 45.0%
ACATATGTCACCTTTCAGGC+CGG + chr5_3:14622340-14622359 Msa0801020:intron 45.0%
!! ACCTTTCAGGCCGGTTTTAT+GGG + chr5_3:14622349-14622368 Msa0801020:intron 45.0%
! TGATGGACGTTGTCGTTATG+TGG + chr5_3:14622860-14622879 Msa0801020:intron 45.0%
! TCATGCTAACTTGTGCCCTT+GGG + chr5_3:14623259-14623278 Msa0801020:intron 45.0%
TTCCTTAACATGTGCCCCAA+GGG - chr5_3:14623277-14623296 None:intergenic 45.0%
! TCGCAACCGACTTAGAAGAA+GGG + chr5_3:14623457-14623476 Msa0801020:CDS 45.0%
GCAACAACATCCAACTCTAG+GGG + chr5_3:14623727-14623746 Msa0801020:three_prime_UTR 45.0%
CAAAGTTCTTCCCCTAGAGT+TGG - chr5_3:14623740-14623759 None:intergenic 45.0%
CGTGTCAGATAGGACAACAT+GGG - chr5_3:14623766-14623785 None:intergenic 45.0%
TCGTGTCAGATAGGACAACA+TGG - chr5_3:14623767-14623786 None:intergenic 45.0%
!!! AAATTTCATTAAATTTTAAT+GGG - chr5_3:14619617-14619636 None:intergenic 5.0%
!!! TAAATTTCATTAAATTTTAA+TGG - chr5_3:14619618-14619637 None:intergenic 5.0%
!! ATATATAAAAAAACATATAT+AGG - chr5_3:14622724-14622743 None:intergenic 5.0%
TTGTGCGATTCCTCCTTCCA+TGG - chr5_3:14616730-14616749 None:intergenic 50.0%
TATGCCCTTTGCACCATTGG+AGG + chr5_3:14616768-14616787 Msa0801020:CDS 50.0%
GCATTCCTCCAATGGTGCAA+AGG - chr5_3:14616776-14616795 None:intergenic 50.0%
! AGCACTGAGCATTCCTCCAA+TGG - chr5_3:14616784-14616803 None:intergenic 50.0%
ATTGGAGGAATGCTCAGTGC+TGG + chr5_3:14616783-14616802 Msa0801020:CDS 50.0%
CCCTCCAGTTCCTAGAGAAA+CGG - chr5_3:14617576-14617595 None:intergenic 50.0%
! CCGTTTCTCTAGGAACTGGA+GGG + chr5_3:14617573-14617592 Msa0801020:intron 50.0%
CATCCTTTCCACAGGACAGA+AGG - chr5_3:14617798-14617817 None:intergenic 50.0%
CTTCTGTCCTGTGGAAAGGA+TGG + chr5_3:14617796-14617815 Msa0801020:CDS 50.0%
GGATGGACAGGCAAGTTCTT+TGG + chr5_3:14617813-14617832 Msa0801020:CDS 50.0%
TTTGGCTATGGTGCTCAAGG+AGG + chr5_3:14617831-14617850 Msa0801020:CDS 50.0%
TTGGCTATGGTGCTCAAGGA+GGG + chr5_3:14617832-14617851 Msa0801020:CDS 50.0%
ACTGCTTGCAGATTCTACCG+TGG + chr5_3:14618171-14618190 Msa0801020:intron 50.0%
!! CCGTGGACTTGTTCCACTTT+TGG + chr5_3:14618188-14618207 Msa0801020:CDS 50.0%
AAAGCTACCAACGGATCCAG+CGG - chr5_3:14619175-14619194 None:intergenic 50.0%
AGAGTTGAGAGAGAGAGGTG+GGG + chr5_3:14619994-14620013 Msa0801020:intron 50.0%
TAGCAACCAGGTTGCAGAAC+TGG + chr5_3:14620083-14620102 Msa0801020:intron 50.0%
CGGTAACATCAGACGACTCT+CGG - chr5_3:14620157-14620176 None:intergenic 50.0%
CGAGAGTCGTCTGATGTTAC+CGG + chr5_3:14620155-14620174 Msa0801020:intron 50.0%
GTCTCAGTTGCGGTTTGCAA+TGG + chr5_3:14620769-14620788 Msa0801020:intron 50.0%
AGCCTAACTGATGGAGACCT+AGG - chr5_3:14621749-14621768 None:intergenic 50.0%
TAGGTCTCCATCAGTTAGGC+TGG + chr5_3:14621748-14621767 Msa0801020:intron 50.0%
TATTGCTGAGAGTCCCACAC+TGG + chr5_3:14622072-14622091 Msa0801020:intron 50.0%
CTGGATGTGATATGTCCAGG+AGG + chr5_3:14622091-14622110 Msa0801020:intron 50.0%
ATGTGATATGTCCAGGAGGG+AGG + chr5_3:14622095-14622114 Msa0801020:intron 50.0%
CCGAGTAGCCCGATTACAAT+TGG - chr5_3:14622234-14622253 None:intergenic 50.0%
!! CACCTTTCAGGCCGGTTTTA+TGG + chr5_3:14622348-14622367 Msa0801020:intron 50.0%
!! CCTTTCAGGCCGGTTTTATG+GGG + chr5_3:14622350-14622369 Msa0801020:intron 50.0%
TAGGCTGTCTTGCAAGAGAG+AGG + chr5_3:14622607-14622626 Msa0801020:intron 50.0%
AGGCTGTCTTGCAAGAGAGA+GGG + chr5_3:14622608-14622627 Msa0801020:intron 50.0%
TGTCTTGCAAGAGAGAGGGA+TGG + chr5_3:14622612-14622631 Msa0801020:intron 50.0%
TTGCAAGAGAGAGGGATGGA+GGG + chr5_3:14622616-14622635 Msa0801020:intron 50.0%
! CTCTCCGAAAGCACAAACAG+TGG - chr5_3:14622665-14622684 None:intergenic 50.0%
! GTCATGCTAACTTGTGCCCT+TGG + chr5_3:14623258-14623277 Msa0801020:intron 50.0%
! CATGCTAACTTGTGCCCTTG+GGG + chr5_3:14623260-14623279 Msa0801020:intron 50.0%
GTTCCTTAACATGTGCCCCA+AGG - chr5_3:14623278-14623297 None:intergenic 50.0%
AAACCTTGCAGGCCAACTAG+TGG + chr5_3:14623429-14623448 Msa0801020:intron 50.0%
GTTGCGACTTCACCACTAGT+TGG - chr5_3:14623444-14623463 None:intergenic 50.0%
! GTCGCAACCGACTTAGAAGA+AGG + chr5_3:14623456-14623475 Msa0801020:CDS 50.0%
! ACCGACTTAGAAGAAGGGTC+TGG + chr5_3:14623462-14623481 Msa0801020:CDS 50.0%
GCCAGACCCTTCTTCTAAGT+CGG - chr5_3:14623466-14623485 None:intergenic 50.0%
GTGGAGCACACCAAGAAGTA+TGG - chr5_3:14623937-14623956 None:intergenic 50.0%
GAAAAGGATCATGGCGGCCA+TGG + chr5_3:14616710-14616729 Msa0801020:exon 55.0%
TTGGGCTGCCCTTATAGGTC+TGG + chr5_3:14617339-14617358 Msa0801020:intron 55.0%
TGGGCTGCCCTTATAGGTCT+GGG + chr5_3:14617340-14617359 Msa0801020:intron 55.0%
! AGGGCCGTTTCTCTAGGAAC+TGG + chr5_3:14617569-14617588 Msa0801020:intron 55.0%
! GCCGTTTCTCTAGGAACTGG+AGG + chr5_3:14617572-14617591 Msa0801020:intron 55.0%
AACAAGGGCCTTCTGTCCTG+TGG + chr5_3:14617787-14617806 Msa0801020:CDS 55.0%
GTCCTGTGGAAAGGATGGAC+AGG + chr5_3:14617801-14617820 Msa0801020:CDS 55.0%
TGCCTGTCCATCCTTTCCAC+AGG - chr5_3:14617806-14617825 None:intergenic 55.0%
! GCTCAAGGAGGGTGCAGATT+TGG + chr5_3:14617843-14617862 Msa0801020:CDS 55.0%
GGTTATACCGCTGGATCCGT+TGG + chr5_3:14619165-14619184 Msa0801020:CDS 55.0%
TTGAGAGAGAGAGGTGGGGA+AGG + chr5_3:14619998-14620017 Msa0801020:intron 55.0%
TGAGAGAGAGAGGTGGGGAA+GGG + chr5_3:14619999-14620018 Msa0801020:intron 55.0%
ACGGAGAGATGCCCGTGTTA+GGG + chr5_3:14620029-14620048 Msa0801020:intron 55.0%
GGAAGCCCAATACGCCCTAA+TGG - chr5_3:14621728-14621747 None:intergenic 55.0%
TAGGGCGTATTGGGCTTCCT+AGG + chr5_3:14621729-14621748 Msa0801020:intron 55.0%
TGATATGTCCAGGAGGGAGG+AGG + chr5_3:14622098-14622117 Msa0801020:intron 55.0%
GATATGTCCAGGAGGGAGGA+GGG + chr5_3:14622099-14622118 Msa0801020:intron 55.0%
ATAAACACCCTCCTCCCTCC+TGG - chr5_3:14622109-14622128 None:intergenic 55.0%
AACACATGCCCCTCATGGCT+AGG - chr5_3:14622278-14622297 None:intergenic 55.0%
CTCTCAACACATGCCCCTCA+TGG - chr5_3:14622283-14622302 None:intergenic 55.0%
CCCCATAAAACCGGCCTGAA+AGG - chr5_3:14622353-14622372 None:intergenic 55.0%
CTTGCAAGAGAGAGGGATGG+AGG + chr5_3:14622615-14622634 Msa0801020:intron 55.0%
TGCAAGAGAGAGGGATGGAG+GGG + chr5_3:14622617-14622636 Msa0801020:intron 55.0%
TGTCCATGTAACAAGCGGGC+TGG + chr5_3:14623114-14623133 Msa0801020:intron 55.0%
TGCCCTTGGGGCACATGTTA+AGG + chr5_3:14623272-14623291 Msa0801020:intron 55.0%
! TCACCACTAGTTGGCCTGCA+AGG - chr5_3:14623435-14623454 None:intergenic 55.0%
AGGATCATGGCGGCCATGGA+AGG + chr5_3:14616714-14616733 Msa0801020:exon 60.0%
ATCATGGCGGCCATGGAAGG+AGG + chr5_3:14616717-14616736 Msa0801020:exon 60.0%
GGGCCTTCTGTCCTGTGGAA+AGG + chr5_3:14617792-14617811 Msa0801020:CDS 60.0%
! TATGCAGCAGAAGGCGCACG+AGG + chr5_3:14618059-14618078 Msa0801020:CDS 60.0%
! ATGCAGCAGAAGGCGCACGA+GGG + chr5_3:14618060-14618079 Msa0801020:CDS 60.0%
GGTGGGGAAGGGAAACTGCA+CGG + chr5_3:14620010-14620029 Msa0801020:intron 60.0%
CACGGAGAGATGCCCGTGTT+AGG + chr5_3:14620028-14620047 Msa0801020:intron 60.0%
GTGGGTCCAGTTCTGCAACC+TGG - chr5_3:14620092-14620111 None:intergenic 60.0%
AAGAGAGAGGGATGGAGGGG+AGG + chr5_3:14622620-14622639 Msa0801020:intron 60.0%
AGAGAGAGGGATGGAGGGGA+GGG + chr5_3:14622621-14622640 Msa0801020:intron 60.0%
AAGTTCATCCCAGCCCGCCT+CGG - chr5_3:14623177-14623196 None:intergenic 60.0%
AGAGGGATGGAGGGGAGGGA+CGG + chr5_3:14622625-14622644 Msa0801020:intron 65.0%
! GGGCCAGCCCGCTTGTTACA+TGG - chr5_3:14623120-14623139 None:intergenic 65.0%
TGTGCTAGCCCACTGGACCG+AGG + chr5_3:14623157-14623176 Msa0801020:intron 65.0%
GCTAGCCCACTGGACCGAGG+CGG + chr5_3:14623160-14623179 Msa0801020:intron 70.0%
CTAGCCCACTGGACCGAGGC+GGG + chr5_3:14623161-14623180 Msa0801020:intron 70.0%
CCAGCCCGCCTCGGTCCAGT+GGG - chr5_3:14623168-14623187 None:intergenic 75.0%
! CCACTGGACCGAGGCGGGCT+GGG + chr5_3:14623166-14623185 Msa0801020:intron 75.0%
! CCCACTGGACCGAGGCGGGC+TGG + chr5_3:14623165-14623184 Msa0801020:intron 80.0%
! CCCAGCCCGCCTCGGTCCAG+TGG - chr5_3:14623169-14623188 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 14616444 14624044 14616444 ID=Msa0801020;Name=Msa0801020
chr5_3 mRNA 14616444 14624044 14616444 ID=Msa0801020-mRNA-1;Parent=Msa0801020;Name=Msa0801020-mRNA-1;_AED=0.10;_eAED=0.10;_QI=174|1|1|1|0.83|0.71|7|556|306
chr5_3 exon 14616444 14616502 14616444 ID=Msa0801020-mRNA-1:exon:6137;Parent=Msa0801020-mRNA-1
chr5_3 exon 14616605 14616857 14616605 ID=Msa0801020-mRNA-1:exon:6138;Parent=Msa0801020-mRNA-1
chr5_3 exon 14617732 14618081 14617732 ID=Msa0801020-mRNA-1:exon:6139;Parent=Msa0801020-mRNA-1
chr5_3 exon 14618182 14618225 14618182 ID=Msa0801020-mRNA-1:exon:6140;Parent=Msa0801020-mRNA-1
chr5_3 exon 14619046 14619260 14619046 ID=Msa0801020-mRNA-1:exon:6141;Parent=Msa0801020-mRNA-1
chr5_3 exon 14619350 14619474 14619350 ID=Msa0801020-mRNA-1:exon:6142;Parent=Msa0801020-mRNA-1
chr5_3 exon 14623440 14624044 14623440 ID=Msa0801020-mRNA-1:exon:6143;Parent=Msa0801020-mRNA-1
chr5_3 five_prime_UTR 14616444 14616502 14616444 ID=Msa0801020-mRNA-1:five_prime_utr;Parent=Msa0801020-mRNA-1
chr5_3 five_prime_UTR 14616605 14616719 14616605 ID=Msa0801020-mRNA-1:five_prime_utr;Parent=Msa0801020-mRNA-1
chr5_3 CDS 14616720 14616857 14616720 ID=Msa0801020-mRNA-1:cds;Parent=Msa0801020-mRNA-1
chr5_3 CDS 14617732 14618081 14617732 ID=Msa0801020-mRNA-1:cds;Parent=Msa0801020-mRNA-1
chr5_3 CDS 14618182 14618225 14618182 ID=Msa0801020-mRNA-1:cds;Parent=Msa0801020-mRNA-1
chr5_3 CDS 14619046 14619260 14619046 ID=Msa0801020-mRNA-1:cds;Parent=Msa0801020-mRNA-1
chr5_3 CDS 14619350 14619474 14619350 ID=Msa0801020-mRNA-1:cds;Parent=Msa0801020-mRNA-1
chr5_3 CDS 14623440 14623488 14623440 ID=Msa0801020-mRNA-1:cds;Parent=Msa0801020-mRNA-1
chr5_3 three_prime_UTR 14623489 14624044 14623489 ID=Msa0801020-mRNA-1:three_prime_utr;Parent=Msa0801020-mRNA-1
Gene Sequence

>Msa0801020

ATGGCGGCCATGGAAGGAGGAATCGCACAAGAATTAACGCCAAGGTATTATGCCCTTTGCACCATTGGAGGAATGCTCAGTGCTGGTACCACTCATCTTGCTACAACTCCTCTTGATGTTTTGAAAGTTAACATGCAGGTGCACCCAATTAAATATTACAGTATTTCATCGTGCTTTACTACGTTATTGAGGGAACAAGGGCCTTCTGTCCTGTGGAAAGGATGGACAGGCAAGTTCTTTGGCTATGGTGCTCAAGGAGGGTGCAGATTTGGTCTCTACGAATATTTTAAGGGAGTTTACTCCAATGTATTGGTAGACCAGCACAGAAGTCTTGTATATTTTCTTAGTAGTGCATCTGCTGAAGTATTTGCCAATTTAGCTCTATGTCCATTTGAAGCTGTTAAAGTCAGGGTTCAAGCACAACCTAGTTATGCTAAGGGCATGTTTGACGGCTTTCCAAAGGTATATGCAGCAGAAGGCGCACGAGGATTCTACCGTGGACTTGTTCCACTTTTGGGTCGAAACATTCCATTTTCCATGGTTATGTTCTCAACATTCGAGCATTCTGTTGATTTTTTGTATCGCAATGTTGTCAAAAGAAAAAAGGAGGAATGTTCAAAAGCTCAACAGCTAGGTGTGACATGTTTAGCTGGTTATACCGCTGGATCCGTTGGTAGCTTTGTTTCTAATCCTGCTGATAATATAGTAGCTTCTCTTTATAACAGAAAAGCCGAGAGTCTTGTTCTGGCTATCAGAAAAATTGGGCTAGCCAATTTATTTACCAGGAGTCTTCCTATTAGAATGTTGCTGGTTGGTCCTTCTATAACTTTGCAATGGTTTTTCTACGACACTATCAAAGTTTTAGGCGGACTGCCAACTAGTGGTGAAGTCGCAACCGACTTAGAAGAAGGGTCTGGCTAG
Protein sequence

>Msa0801020

MAAMEGGIAQELTPRYYALCTIGGMLSAGTTHLATTPLDVLKVNMQVHPIKYYSISSCFTTLLREQGPSVLWKGWTGKFFGYGAQGGCRFGLYEYFKGVYSNVLVDQHRSLVYFLSSASAEVFANLALCPFEAVKVRVQAQPSYAKGMFDGFPKVYAAEGARGFYRGLVPLLGRNIPFSMVMFSTFEHSVDFLYRNVVKRKKEECSKAQQLGVTCLAGYTAGSVGSFVSNPADNIVASLYNRKAESLVLAIRKIGLANLFTRSLPIRMLLVGPSITLQWFFYDTIKVLGGLPTSGEVATDLEEGSG*