Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1210250 | sp|Q94JX5|WLIM1_ARATH | 69.143 | 175 | 53 | 1 | 3 | 176 | 2 | 176 | 1.38e-89 | 263 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1210250 | G7JNV0 | 96.133 | 181 | 7 | 0 | 1 | 181 | 1 | 181 | 2.58e-127 | 364 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1210250 | TF | LIM |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011060 | Msa1210250 | -0.804779 | 1.834173e-49 | -8.615850e-47 |
| Msa0016380 | Msa1210250 | -0.800118 | 1.674611e-48 | -8.615850e-47 |
| Msa0074860 | Msa1210250 | -0.803127 | 4.043475e-49 | -8.615850e-47 |
| Msa0097470 | Msa1210250 | -0.800091 | 1.695615e-48 | -8.615850e-47 |
| Msa0110240 | Msa1210250 | 0.802314 | 5.948813e-49 | -8.615850e-47 |
| Msa0615070 | Msa1210250 | 0.805139 | 1.541858e-49 | -8.615850e-47 |
| Msa0615780 | Msa1210250 | 0.818723 | 1.688831e-52 | -8.615850e-47 |
| Msa0616890 | Msa1210250 | -0.801638 | 8.191167e-49 | -8.615850e-47 |
| Msa0625900 | Msa1210250 | -0.815014 | 1.148590e-51 | -8.615850e-47 |
| Msa0638820 | Msa1210250 | 0.805158 | 1.528181e-49 | -8.615850e-47 |
| Msa0644340 | Msa1210250 | 0.801806 | 7.566134e-49 | -8.615850e-47 |
| Msa0655200 | Msa1210250 | 0.814036 | 1.889887e-51 | -8.615850e-47 |
| Msa0663690 | Msa1210250 | -0.814624 | 1.401439e-51 | -8.615850e-47 |
| Msa0672950 | Msa1210250 | 0.801987 | 6.946541e-49 | -8.615850e-47 |
| Msa0672980 | Msa1210250 | 0.800461 | 1.425595e-48 | -8.615850e-47 |
| Msa0686830 | Msa1210250 | 0.801309 | 9.567101e-49 | -8.615850e-47 |
| Msa0695140 | Msa1210250 | 0.818432 | 1.966616e-52 | -8.615850e-47 |
| Msa0697510 | Msa1210250 | 0.802991 | 4.314066e-49 | -8.615850e-47 |
| Msa0697520 | Msa1210250 | 0.803772 | 2.971736e-49 | -8.615850e-47 |
| Msa0701430 | Msa1210250 | 0.800435 | 1.443287e-48 | -8.615850e-47 |
| Msa0701800 | Msa1210250 | -0.808061 | 3.726313e-50 | -8.615850e-47 |
| Msa0707860 | Msa1210250 | -0.804883 | 1.743959e-49 | -8.615850e-47 |
| Msa0738460 | Msa1210250 | -0.814615 | 1.407995e-51 | -8.615850e-47 |
| Msa0769910 | Msa1210250 | -0.806634 | 7.480295e-50 | -8.615850e-47 |
| Msa0795910 | Msa1210250 | -0.801560 | 8.501930e-49 | -8.615850e-47 |
| Msa0807870 | Msa1210250 | -0.804073 | 2.572985e-49 | -8.615850e-47 |
| Msa0826380 | Msa1210250 | 0.808379 | 3.188576e-50 | -8.615850e-47 |
| Msa0826450 | Msa1210250 | 0.806695 | 7.261301e-50 | -8.615850e-47 |
| Msa0829250 | Msa1210250 | -0.802634 | 5.112491e-49 | -8.615850e-47 |
| Msa0127350 | Msa1210250 | -0.804331 | 2.273703e-49 | -8.615850e-47 |
| Msa0138340 | Msa1210250 | -0.802362 | 5.815077e-49 | -8.615850e-47 |
| Msa0141410 | Msa1210250 | 0.802750 | 4.836852e-49 | -8.615850e-47 |
| Msa0147960 | Msa1210250 | -0.800842 | 1.192365e-48 | -8.615850e-47 |
| Msa0159240 | Msa1210250 | -0.800426 | 1.449488e-48 | -8.615850e-47 |
| Msa0195810 | Msa1210250 | -0.809944 | 1.472682e-50 | -8.615850e-47 |
| Msa0197170 | Msa1210250 | 0.812820 | 3.497747e-51 | -8.615850e-47 |
| Msa0225070 | Msa1210250 | -0.814106 | 1.824107e-51 | -8.615850e-47 |
| Msa0238140 | Msa1210250 | 0.805907 | 1.064311e-49 | -8.615850e-47 |
| Msa0403740 | Msa1210250 | -0.817104 | 3.919613e-52 | -8.615850e-47 |
| Msa0405200 | Msa1210250 | 0.813751 | 2.184286e-51 | -8.615850e-47 |
| Msa0428720 | Msa1210250 | -0.817096 | 3.937685e-52 | -8.615850e-47 |
| Msa0449500 | Msa1210250 | 0.829130 | 6.114476e-55 | -8.615850e-47 |
| Msa0456450 | Msa1210250 | -0.809414 | 1.914399e-50 | -8.615850e-47 |
| Msa0457070 | Msa1210250 | -0.805329 | 1.407155e-49 | -8.615850e-47 |
| Msa0459930 | Msa1210250 | 0.806925 | 6.491519e-50 | -8.615850e-47 |
| Msa1006030 | Msa1210250 | 0.805010 | 1.640488e-49 | -8.615850e-47 |
| Msa1016580 | Msa1210250 | -0.812461 | 4.191303e-51 | -8.615850e-47 |
| Msa1039150 | Msa1210250 | -0.810024 | 1.415949e-50 | -8.615850e-47 |
| Msa1041250 | Msa1210250 | 0.806946 | 6.424225e-50 | -8.615850e-47 |
| Msa1088400 | Msa1210250 | -0.802736 | 4.869033e-49 | -8.615850e-47 |
| Msa1093190 | Msa1210250 | -0.801118 | 1.046783e-48 | -8.615850e-47 |
| Msa1094810 | Msa1210250 | 0.805041 | 1.616354e-49 | -8.615850e-47 |
| Msa0242720 | Msa1210250 | 0.810057 | 1.392760e-50 | -8.615850e-47 |
| Msa0266140 | Msa1210250 | -0.809231 | 2.095565e-50 | -8.615850e-47 |
| Msa0270730 | Msa1210250 | -0.809504 | 1.830998e-50 | -8.615850e-47 |
| Msa0303900 | Msa1210250 | 0.803457 | 3.454458e-49 | -8.615850e-47 |
| Msa0304060 | Msa1210250 | -0.810697 | 1.013057e-50 | -8.615850e-47 |
| Msa0308750 | Msa1210250 | 0.806935 | 6.459879e-50 | -8.615850e-47 |
| Msa0316740 | Msa1210250 | 0.810900 | 9.158751e-51 | -8.615850e-47 |
| Msa0364030 | Msa1210250 | -0.816226 | 6.168431e-52 | -8.615850e-47 |
| Msa1132880 | Msa1210250 | -0.803111 | 4.074139e-49 | -8.615850e-47 |
| Msa1146980 | Msa1210250 | 0.821884 | 3.184445e-53 | -8.615850e-47 |
| Msa1150740 | Msa1210250 | 0.801176 | 1.018996e-48 | -8.615850e-47 |
| Msa1157200 | Msa1210250 | 0.813621 | 2.333586e-51 | -8.615850e-47 |
| Msa1169600 | Msa1210250 | -0.800178 | 1.628046e-48 | -8.615850e-47 |
| Msa1174280 | Msa1210250 | 0.801820 | 7.517042e-49 | -8.615850e-47 |
| Msa1191530 | Msa1210250 | -0.818699 | 1.710455e-52 | -8.615850e-47 |
| Msa1194480 | Msa1210250 | -0.810972 | 8.835557e-51 | -8.615850e-47 |
| Msa1202110 | Msa1210250 | 0.815411 | 9.373975e-52 | -8.615850e-47 |
| Msa1202470 | Msa1210250 | 0.802974 | 4.348547e-49 | -8.615850e-47 |
| Msa1204870 | Msa1210250 | -0.806380 | 8.460766e-50 | -8.615850e-47 |
| Msa1204900 | Msa1210250 | -0.816595 | 5.099213e-52 | -8.615850e-47 |
| Msa1205270 | Msa1210250 | -0.817346 | 3.457886e-52 | -8.615850e-47 |
| Msa1210150 | Msa1210250 | 0.894695 | 1.936488e-75 | -8.615850e-47 |
| Msa1210250 | Msa1210850 | 0.865322 | 6.425495e-65 | -8.615850e-47 |
| Msa1210250 | Msa1221270 | 0.809420 | 1.908645e-50 | -8.615850e-47 |
| Msa1210250 | Msa1228600 | -0.810855 | 9.367516e-51 | -8.615850e-47 |
| Msa1210250 | Msa1254870 | 0.813845 | 2.082784e-51 | -8.615850e-47 |
| Msa1210250 | Msa1254910 | 0.808313 | 3.292527e-50 | -8.615850e-47 |
| Msa1210250 | Msa1256490 | -0.816386 | 5.679931e-52 | -8.615850e-47 |
| Msa1210250 | Msa1259260 | 0.915555 | 5.119660e-85 | -8.615850e-47 |
| Msa1210250 | Msa1291070 | -0.810516 | 1.108701e-50 | -8.615850e-47 |
| Msa1210250 | Msa1296810 | -0.803516 | 3.358523e-49 | -8.615850e-47 |
| Msa1210250 | Msa1323260 | -0.812024 | 5.219267e-51 | -8.615850e-47 |
| Msa1210250 | Msa1328430 | 0.812701 | 3.714303e-51 | -8.615850e-47 |
| Msa1210250 | Msa1331570 | -0.809171 | 2.158778e-50 | -8.615850e-47 |
| Msa1210250 | Msa1342360 | -0.808038 | 3.768320e-50 | -8.615850e-47 |
| Msa1210250 | Msa1371540 | -0.813982 | 1.942318e-51 | -8.615850e-47 |
| Msa1210250 | Msa1375640 | 0.808955 | 2.401587e-50 | -8.615850e-47 |
| Msa1210250 | Msa1377980 | -0.818436 | 1.962068e-52 | -8.615850e-47 |
| Msa1210250 | Msa1381300 | -0.805786 | 1.128244e-49 | -8.615850e-47 |
| Msa1210250 | Msa1384410 | -0.804260 | 2.352449e-49 | -8.615850e-47 |
| Msa1210250 | Msa1395380 | -0.811936 | 5.455173e-51 | -8.615850e-47 |
| Msa1210250 | Msa1396720 | 0.895601 | 8.208085e-76 | -8.615850e-47 |
| Msa1210250 | Msa1398120 | 0.811017 | 8.640079e-51 | -8.615850e-47 |
| Msa1210250 | Msa1408230 | -0.800369 | 1.488803e-48 | -8.615850e-47 |
| Msa1210250 | Msa1408280 | -0.818557 | 1.842518e-52 | -8.615850e-47 |
| Msa1210250 | Msa1413150 | 0.801359 | 9.346421e-49 | -8.615850e-47 |
| Msa1210250 | Msa1425760 | 0.897758 | 1.030348e-76 | -8.615850e-47 |
| Msa1210250 | Msa1454300 | -0.816261 | 6.059242e-52 | -8.615850e-47 |
| Msa1210250 | Msa1459130 | -0.807638 | 4.583313e-50 | -8.615850e-47 |
| Msa1210250 | Msa1459920 | 0.805002 | 1.647278e-49 | -8.615850e-47 |
| Msa0491160 | Msa1210250 | -0.817610 | 3.016817e-52 | -8.615850e-47 |
| Msa0497680 | Msa1210250 | 0.807852 | 4.128436e-50 | -8.615850e-47 |
| Msa0527210 | Msa1210250 | -0.801862 | 7.369186e-49 | -8.615850e-47 |
| Msa0538050 | Msa1210250 | -0.834810 | 2.416963e-56 | -8.615850e-47 |
| Msa0548420 | Msa1210250 | 0.814014 | 1.910925e-51 | -8.615850e-47 |
| Msa0560280 | Msa1210250 | 0.806518 | 7.911995e-50 | -8.615850e-47 |
| Msa0565370 | Msa1210250 | -0.808517 | 2.978967e-50 | -8.615850e-47 |
| Msa0565430 | Msa1210250 | -0.809332 | 1.993835e-50 | -8.615850e-47 |
| Msa0570600 | Msa1210250 | 0.819923 | 8.998597e-53 | -8.615850e-47 |
| Msa0572730 | Msa1210250 | -0.818073 | 2.370989e-52 | -8.615850e-47 |
| Msa0580410 | Msa1210250 | -0.802389 | 5.742161e-49 | -8.615850e-47 |
| Msa0580890 | Msa1210250 | -0.801434 | 9.022487e-49 | -8.615850e-47 |
| Msa0583270 | Msa1210250 | -0.808564 | 2.911373e-50 | -8.615850e-47 |
| Msa0585720 | Msa1210250 | -0.811335 | 7.372537e-51 | -8.615850e-47 |
| Msa0913520 | Msa1210250 | 0.801289 | 9.658056e-49 | -8.615850e-47 |
| Msa0934290 | Msa1210250 | -0.802333 | 5.897817e-49 | -8.615850e-47 |
| Msa0938150 | Msa1210250 | -0.804467 | 2.130230e-49 | -8.615850e-47 |
| Msa0947420 | Msa1210250 | 0.807000 | 6.257457e-50 | -8.615850e-47 |
| Msa0967900 | Msa1210250 | -0.808854 | 2.523526e-50 | -8.615850e-47 |
| Msa0971780 | Msa1210250 | -0.801649 | 8.149583e-49 | -8.615850e-47 |
| Msa0975950 | Msa1210250 | 0.800856 | 1.184080e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1210250 | MtrunA17_Chr4g0059371 | 96.133 | 181 | 7 | 0 | 1 | 181 | 1 | 181 | 4.97e-131 | 364 |
| Msa1210250 | MtrunA17_Chr1g0152431 | 67.429 | 175 | 56 | 1 | 3 | 176 | 2 | 176 | 2.34e-89 | 259 |
| Msa1210250 | MtrunA17_Chr3g0113051 | 54.945 | 182 | 77 | 3 | 3 | 181 | 2 | 181 | 3.72e-69 | 208 |
| Msa1210250 | MtrunA17_Chr8g0386501 | 50.838 | 179 | 81 | 2 | 3 | 181 | 2 | 173 | 4.86e-62 | 191 |
| Msa1210250 | MtrunA17_Chr8g0386501 | 53.521 | 71 | 33 | 0 | 2 | 72 | 93 | 163 | 5.87e-20 | 83.2 |
| Msa1210250 | MtrunA17_Chr8g0349391 | 50.279 | 179 | 76 | 2 | 3 | 177 | 2 | 171 | 4.53e-60 | 186 |
| Msa1210250 | MtrunA17_Chr7g0247111 | 49.133 | 173 | 81 | 2 | 3 | 173 | 2 | 169 | 4.97e-58 | 181 |
| Msa1210250 | MtrunA17_Chr7g0247111 | 43.038 | 79 | 45 | 0 | 4 | 82 | 99 | 177 | 1.80e-15 | 71.2 |
| Msa1210250 | MtrunA17_Chr7g0247111 | 43.056 | 72 | 41 | 0 | 103 | 174 | 3 | 74 | 3.52e-15 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1210250 | AT1G10200.1 | 69.143 | 175 | 53 | 1 | 3 | 176 | 2 | 176 | 1.40e-90 | 263 |
| Msa1210250 | AT3G55770.3 | 56.111 | 180 | 76 | 2 | 3 | 181 | 2 | 179 | 1.66e-70 | 212 |
| Msa1210250 | AT3G55770.5 | 56.111 | 180 | 76 | 2 | 3 | 181 | 2 | 179 | 1.66e-70 | 212 |
| Msa1210250 | AT3G55770.2 | 56.111 | 180 | 76 | 2 | 3 | 181 | 2 | 179 | 1.66e-70 | 212 |
| Msa1210250 | AT3G55770.1 | 56.111 | 180 | 76 | 2 | 3 | 181 | 2 | 179 | 1.66e-70 | 212 |
| Msa1210250 | AT2G39900.1 | 53.073 | 179 | 84 | 0 | 3 | 181 | 2 | 180 | 3.42e-69 | 209 |
| Msa1210250 | AT3G61230.1 | 53.179 | 173 | 78 | 1 | 1 | 173 | 1 | 170 | 6.19e-67 | 204 |
| Msa1210250 | AT3G61230.1 | 40.659 | 91 | 54 | 0 | 4 | 94 | 100 | 190 | 1.20e-17 | 77.4 |
| Msa1210250 | AT3G61230.1 | 44.444 | 72 | 40 | 0 | 103 | 174 | 4 | 75 | 6.48e-16 | 72.8 |
| Msa1210250 | AT2G45800.1 | 53.488 | 172 | 75 | 2 | 3 | 173 | 2 | 169 | 4.83e-63 | 194 |
| Msa1210250 | AT2G45800.1 | 46.512 | 86 | 46 | 0 | 4 | 89 | 99 | 184 | 9.23e-18 | 78.2 |
| Msa1210250 | AT2G45800.1 | 45.833 | 72 | 39 | 0 | 103 | 174 | 3 | 74 | 1.42e-16 | 74.7 |
| Msa1210250 | AT1G01780.1 | 52.047 | 171 | 77 | 2 | 3 | 173 | 2 | 167 | 5.44e-63 | 193 |
| Msa1210250 | AT1G01780.1 | 47.222 | 72 | 38 | 0 | 103 | 174 | 3 | 74 | 3.84e-17 | 75.9 |
| Msa1210250 | AT3G55770.7 | 47.196 | 214 | 76 | 3 | 3 | 181 | 2 | 213 | 7.38e-63 | 194 |
| Msa1210250 | AT1G10200.2 | 65.909 | 132 | 44 | 1 | 46 | 176 | 3 | 134 | 1.42e-62 | 190 |
| Msa1210250 | AT1G10200.2 | 47.222 | 72 | 38 | 0 | 4 | 75 | 61 | 132 | 2.95e-16 | 72.4 |
| Msa1210250 | AT3G55770.4 | 58.197 | 122 | 48 | 2 | 3 | 123 | 2 | 121 | 1.30e-43 | 142 |
| Msa1210250 | AT3G55770.4 | 47.222 | 72 | 38 | 0 | 103 | 174 | 3 | 74 | 3.35e-18 | 77.0 |
| Msa1210250 | AT2G45800.2 | 50.000 | 140 | 64 | 3 | 35 | 173 | 4 | 138 | 9.73e-43 | 141 |
| Msa1210250 | AT2G45800.2 | 46.512 | 86 | 46 | 0 | 4 | 89 | 68 | 153 | 3.39e-18 | 78.6 |
| Msa1210250 | AT3G55770.6 | 55.738 | 122 | 51 | 2 | 3 | 123 | 2 | 121 | 1.42e-40 | 134 |
| Msa1210250 | AT3G55770.6 | 47.222 | 72 | 38 | 0 | 103 | 174 | 3 | 74 | 2.03e-18 | 77.4 |
Find 42 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATAAGGTTGAACAAGTCTA+AGG | 0.271390 | 8_1:+69066146 | Msa1210250:CDS |
| CTTGTTCAACCTTATCAAAT+TGG | 0.314326 | 8_1:-69066139 | None:intergenic |
| CTTTAAGATGACTGGCAGTT+TGG | 0.324339 | 8_1:+69064787 | Msa1210250:CDS |
| TTTGAGATGGCATCATTTGC+AGG | 0.338265 | 8_1:+69062950 | Msa1210250:exon |
| CATGTGAAAAGAAAGTTTAC+TGG | 0.388914 | 8_1:+69062993 | Msa1210250:CDS |
| TTGAAACCTTGTTATATGCT+TGG | 0.394784 | 8_1:-69065073 | None:intergenic |
| TATGGTGATGTCTACAATAA+AGG | 0.395154 | 8_1:-69066085 | None:intergenic |
| AGTAGTAATCATGTTCATAT+TGG | 0.418531 | 8_1:-69062806 | None:intergenic |
| CAAGTTATATAATATCTGTT+TGG | 0.431157 | 8_1:+69066314 | Msa1210250:three_prime_UTR |
| AATGACACTGTTACAATACT+TGG | 0.434857 | 8_1:+69066269 | Msa1210250:three_prime_UTR |
| TTTCTTTCAAATTCAGTGTA+GGG | 0.440988 | 8_1:-69062876 | None:intergenic |
| GAAGCAAGCAAGAGACTCAT+TGG | 0.444861 | 8_1:+69062903 | Msa1210250:five_prime_UTR |
| TCATGTGCCACATAGTTTGA+TGG | 0.445617 | 8_1:-69066056 | None:intergenic |
| TCTGTTTGAAGATCTGAGTA+TGG | 0.453506 | 8_1:-69066103 | None:intergenic |
| TAATTTCAGCCAATTTGATA+AGG | 0.454495 | 8_1:+69066130 | Msa1210250:CDS |
| CTTACCATAAGACTTGCTTC+AGG | 0.455370 | 8_1:+69066006 | Msa1210250:CDS |
| AGTTGAAAGATCAACTGATC+AGG | 0.484362 | 8_1:+69064962 | Msa1210250:CDS |
| GATCAACTCTTTAAGATGAC+TGG | 0.501872 | 8_1:+69064779 | Msa1210250:CDS |
| AACAGTGTACCCAATTGAAA+AGG | 0.511293 | 8_1:+69065139 | Msa1210250:CDS |
| TTAAAGAGTTGATCAAAATG+AGG | 0.517865 | 8_1:-69064770 | None:intergenic |
| TGCACCTGAAGCAAGTCTTA+TGG | 0.519828 | 8_1:-69066010 | None:intergenic |
| TACTCAGATCTTCAAACAGA+AGG | 0.531322 | 8_1:+69066106 | Msa1210250:CDS |
| TTCTTTCAAATTCAGTGTAG+GGG | 0.532949 | 8_1:-69062875 | None:intergenic |
| TGCCATCTCAAATTCTCACT+TGG | 0.533651 | 8_1:-69062939 | None:intergenic |
| CTTCAGATGCCACCATTGCA+AGG | 0.542591 | 8_1:+69063060 | Msa1210250:CDS |
| TGAGTGTGCCCTTGCAATGG+TGG | 0.554362 | 8_1:-69063069 | None:intergenic |
| ACTTGCTTCAGGTGCACACA+TGG | 0.555007 | 8_1:+69066017 | Msa1210250:CDS |
| TTCAGATGCCACCATTGCAA+GGG | 0.577839 | 8_1:+69063061 | Msa1210250:CDS |
| AATGTGTCTGAAATTAATGT+AGG | 0.578011 | 8_1:+69062783 | Msa1210250:five_prime_UTR |
| ATAAGGTTGAACAAGTCTAA+GGG | 0.583079 | 8_1:+69066147 | Msa1210250:CDS |
| CCTTGAGTGTGCCCTTGCAA+TGG | 0.588637 | 8_1:-69063072 | None:intergenic |
| ATGTGAAAAGAAAGTTTACT+GGG | 0.603879 | 8_1:+69062994 | Msa1210250:CDS |
| ACTCAGATCTTCAAACAGAA+GGG | 0.607367 | 8_1:+69066107 | Msa1210250:CDS |
| TTCCAAGTGAGAATTTGAGA+TGG | 0.619521 | 8_1:+69062937 | Msa1210250:exon |
| AATCAGTCCATCAAACTATG+TGG | 0.634185 | 8_1:+69066049 | Msa1210250:CDS |
| ACTATAATGCAACTTTGCAG+TGG | 0.646927 | 8_1:+69066204 | Msa1210250:three_prime_UTR |
| CCATTGCAAGGGCACACTCA+AGG | 0.651170 | 8_1:+69063072 | Msa1210250:CDS |
| TGCTTCAGGTGCACACATGG+AGG | 0.682276 | 8_1:+69066020 | Msa1210250:CDS |
| ACAGGTCCAAGCATATAACA+AGG | 0.699921 | 8_1:+69065067 | Msa1210250:intron |
| TGAAAAGAAAGTTTACTGGG+TGG | 0.703991 | 8_1:+69062997 | Msa1210250:CDS |
| TGATATATACTTGAGCTGTG+AGG | 0.730347 | 8_1:+69062850 | Msa1210250:five_prime_UTR |
| GGCATCTGAAGCAAGACTTG+TGG | 0.735982 | 8_1:-69063048 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTCTTTACTTTTTATTT+TGG | + | chr8_1:69063229-69063248 | Msa1210250:intron | 10.0% |
| !! | AAGAAAAAAATAATGTATTT+AGG | - | chr8_1:69064189-69064208 | None:intergenic | 10.0% |
| !!! | TTTAATTTTTCAATTGTAAA+TGG | + | chr8_1:69064392-69064411 | Msa1210250:intron | 10.0% |
| !! | ATAAATTAATATATAGATAG+CGG | + | chr8_1:69064520-69064539 | Msa1210250:intron | 10.0% |
| !! | AGTTAGTATTTAATTAATTA+AGG | + | chr8_1:69065609-69065628 | Msa1210250:intron | 10.0% |
| !! | GTTAGTATTTAATTAATTAA+GGG | + | chr8_1:69065610-69065629 | Msa1210250:intron | 10.0% |
| !! | TTCAGAAATCTTTATAAATT+TGG | + | chr8_1:69063181-69063200 | Msa1210250:intron | 15.0% |
| !!! | TGGTAACAATATTTTATAAA+GGG | - | chr8_1:69063646-69063665 | None:intergenic | 15.0% |
| !!! | ATGGTAACAATATTTTATAA+AGG | - | chr8_1:69063647-69063666 | None:intergenic | 15.0% |
| !!! | AAAATATTTTCACATGAAAT+TGG | + | chr8_1:69063911-69063930 | Msa1210250:intron | 15.0% |
| !!! | ATTTTTCAATTACATATGAT+TGG | - | chr8_1:69064068-69064087 | None:intergenic | 15.0% |
| !! | AAAAGTTCTATAACAATATT+TGG | - | chr8_1:69064429-69064448 | None:intergenic | 15.0% |
| !!! | ATATATATACCTTTTCAATT+GGG | - | chr8_1:69065151-69065170 | None:intergenic | 15.0% |
| !!! | AATATATATACCTTTTCAAT+TGG | - | chr8_1:69065152-69065171 | None:intergenic | 15.0% |
| !! | TACACTTTAAATGAAATTAA+TGG | + | chr8_1:69065278-69065297 | Msa1210250:intron | 15.0% |
| !! | ATTTAAAAATAAAGATGAGA+AGG | - | chr8_1:69065341-69065360 | None:intergenic | 15.0% |
| !! | AATATTAAGTAAAGAATACA+TGG | - | chr8_1:69065432-69065451 | None:intergenic | 15.0% |
| !!! | TTGTTACTTAGATATAATAT+GGG | - | chr8_1:69065663-69065682 | None:intergenic | 15.0% |
| !! | TTTGAAAAAATGACATAATT+CGG | + | chr8_1:69065801-69065820 | Msa1210250:intron | 15.0% |
| !! | GAAAACTAAAAACAAAAGTT+TGG | - | chr8_1:69063105-69063124 | None:intergenic | 20.0% |
| !! | AAGTGCATAATAATCTAAAA+GGG | - | chr8_1:69063210-69063229 | None:intergenic | 20.0% |
| !! | TAAGTGCATAATAATCTAAA+AGG | - | chr8_1:69063211-69063230 | None:intergenic | 20.0% |
| !!! | TACTTTTTATTTTGGATGAA+TGG | + | chr8_1:69063237-69063256 | Msa1210250:intron | 20.0% |
| !! | AATTAAACTGCAATGTAATT+GGG | - | chr8_1:69063455-69063474 | None:intergenic | 20.0% |
| !!! | GGTAACAATATTTTATAAAG+GGG | - | chr8_1:69063645-69063664 | None:intergenic | 20.0% |
| !!! | TCCTATGTTTTTTACATTAA+CGG | + | chr8_1:69064551-69064570 | Msa1210250:intron | 20.0% |
| !! | ATAGATATTAAACAGATGAA+AGG | - | chr8_1:69064914-69064933 | None:intergenic | 20.0% |
| !!! | CTTGTTACTTAGATATAATA+TGG | - | chr8_1:69065664-69065683 | None:intergenic | 20.0% |
| !! | CAAGTTATATAATATCTGTT+TGG | + | chr8_1:69066314-69066333 | Msa1210250:three_prime_UTR | 20.0% |
| !! | AATGTGTCTGAAATTAATGT+AGG | + | chr8_1:69062783-69062802 | Msa1210250:five_prime_UTR | 25.0% |
| ! | AGTAGTAATCATGTTCATAT+TGG | - | chr8_1:69062809-69062828 | None:intergenic | 25.0% |
| ! | TTTCTTTCAAATTCAGTGTA+GGG | - | chr8_1:69062879-69062898 | None:intergenic | 25.0% |
| !! | TTTTCTTTCAAATTCAGTGT+AGG | - | chr8_1:69062880-69062899 | None:intergenic | 25.0% |
| ! | ATGTGAAAAGAAAGTTTACT+GGG | + | chr8_1:69062994-69063013 | Msa1210250:CDS | 25.0% |
| ! | AAAAATTGAACCGAATTGAA+TGG | + | chr8_1:69063382-69063401 | Msa1210250:intron | 25.0% |
| ! | CAATTAAACTGCAATGTAAT+TGG | - | chr8_1:69063456-69063475 | None:intergenic | 25.0% |
| ! | ATTGCAGTTTAATTGAACTA+AGG | + | chr8_1:69063461-69063480 | Msa1210250:intron | 25.0% |
| ! | CATAAGTGTTATATATGTGT+CGG | - | chr8_1:69064238-69064257 | None:intergenic | 25.0% |
| ! | ACCGTTAATGTAAAAAACAT+AGG | - | chr8_1:69064555-69064574 | None:intergenic | 25.0% |
| !! | AGTAACTATTGTTCTTTTGA+GGG | + | chr8_1:69064731-69064750 | Msa1210250:CDS | 25.0% |
| !! | TTAAAGAGTTGATCAAAATG+AGG | - | chr8_1:69064773-69064792 | None:intergenic | 25.0% |
| ! | GTTTAATATCTATTGCTTGT+AGG | + | chr8_1:69064921-69064940 | Msa1210250:intron | 25.0% |
| ! | CTAGTAACTAATAATGTAAC+AGG | + | chr8_1:69065049-69065068 | Msa1210250:intron | 25.0% |
| !!! | GAGGCAAAATTACTTTTAAA+GGG | - | chr8_1:69065213-69065232 | None:intergenic | 25.0% |
| !!! | AGAGGCAAAATTACTTTTAA+AGG | - | chr8_1:69065214-69065233 | None:intergenic | 25.0% |
| ! | ATCCTTAAATGTTAACATCA+TGG | + | chr8_1:69065255-69065274 | Msa1210250:intron | 25.0% |
| ! | TACCATGATGTTAACATTTA+AGG | - | chr8_1:69065260-69065279 | None:intergenic | 25.0% |
| ! | AAATAAAGATGAGAAGGATA+AGG | - | chr8_1:69065335-69065354 | None:intergenic | 25.0% |
| ! | TAGTATGTCAGAAAAAAAGA+TGG | - | chr8_1:69065369-69065388 | None:intergenic | 25.0% |
| ! | GAAATATACATAAAATGAGC+TGG | + | chr8_1:69065538-69065557 | Msa1210250:intron | 25.0% |
| ! | TACTAACTTCAAAAATTTGC+AGG | - | chr8_1:69065597-69065616 | None:intergenic | 25.0% |
| ! | ATATATTGGACAATTTGTGT+TGG | - | chr8_1:69065708-69065727 | None:intergenic | 25.0% |
| ! | AACACAAATTGTCCAATATA+TGG | + | chr8_1:69065707-69065726 | Msa1210250:intron | 25.0% |
| ! | TTTCAAATTATTATCCGTGT+CGG | - | chr8_1:69065788-69065807 | None:intergenic | 25.0% |
| ! | ATGAATATATGGTTAGATCT+AGG | - | chr8_1:69065947-69065966 | None:intergenic | 25.0% |
| ! | AGATCTAACCATATATTCAT+TGG | + | chr8_1:69065947-69065966 | Msa1210250:intron | 25.0% |
| ! | GATCTAACCATATATTCATT+GGG | + | chr8_1:69065948-69065967 | Msa1210250:intron | 25.0% |
| ! | TAATTTCAGCCAATTTGATA+AGG | + | chr8_1:69066130-69066149 | Msa1210250:CDS | 25.0% |
| TTCTTTCAAATTCAGTGTAG+GGG | - | chr8_1:69062878-69062897 | None:intergenic | 30.0% | |
| CATGTGAAAAGAAAGTTTAC+TGG | + | chr8_1:69062993-69063012 | Msa1210250:CDS | 30.0% | |
| TTTCGATGAATGCTTCAATA+AGG | + | chr8_1:69063129-69063148 | Msa1210250:intron | 30.0% | |
| ACCGAATTGAATGGTTTAAT+CGG | + | chr8_1:69063391-69063410 | Msa1210250:intron | 30.0% | |
| ACCGATTAAACCATTCAATT+CGG | - | chr8_1:69063395-69063414 | None:intergenic | 30.0% | |
| AAATCAATCGACAAACTAAC+AGG | - | chr8_1:69063429-69063448 | None:intergenic | 30.0% | |
| TTTATAAAGGGGATAAGAGA+TGG | - | chr8_1:69063634-69063653 | None:intergenic | 30.0% | |
| TTTGCACATCTTTACTCTTT+AGG | + | chr8_1:69063763-69063782 | Msa1210250:intron | 30.0% | |
| CCAAAATAGTGGTTATAAGT+GGG | - | chr8_1:69063870-69063889 | None:intergenic | 30.0% | |
| !! | TCAGTTCTGAAAATATACTG+AGG | - | chr8_1:69064036-69064055 | None:intergenic | 30.0% |
| ! | TCAGTATATTTTCAGAACTG+AGG | + | chr8_1:69064035-69064054 | Msa1210250:intron | 30.0% |
| ACATGTCATACGAATGTTAT+AGG | - | chr8_1:69064153-69064172 | None:intergenic | 30.0% | |
| TTAGAAATGTTGATCAACGA+AGG | + | chr8_1:69064338-69064357 | Msa1210250:intron | 30.0% | |
| TAGAAATGTTGATCAACGAA+GGG | + | chr8_1:69064339-69064358 | Msa1210250:intron | 30.0% | |
| ! | GAGTAACTATTGTTCTTTTG+AGG | + | chr8_1:69064730-69064749 | Msa1210250:CDS | 30.0% |
| !! | AGTTTGGACAAAAGTTTTGA+AGG | + | chr8_1:69064803-69064822 | Msa1210250:CDS | 30.0% |
| TTAAGCAATAACCATGTAGT+AGG | - | chr8_1:69064841-69064860 | None:intergenic | 30.0% | |
| AGACAATTTACTTTATGCAG+GGG | - | chr8_1:69065029-69065048 | None:intergenic | 30.0% | |
| GAGACAATTTACTTTATGCA+GGG | - | chr8_1:69065030-69065049 | None:intergenic | 30.0% | |
| AGAGACAATTTACTTTATGC+AGG | - | chr8_1:69065031-69065050 | None:intergenic | 30.0% | |
| ! | TTGAAACCTTGTTATATGCT+TGG | - | chr8_1:69065076-69065095 | None:intergenic | 30.0% |
| !!! | AAGGTTTCAAGATTTTTTGC+TGG | + | chr8_1:69065086-69065105 | Msa1210250:CDS | 30.0% |
| !!! | TTTTGCCTCTAAAATGAGTA+AGG | + | chr8_1:69065224-69065243 | Msa1210250:intron | 30.0% |
| ! | TTCAACCTTACTCATTTTAG+AGG | - | chr8_1:69065232-69065251 | None:intergenic | 30.0% |
| GTGTATCTTCACATGTATAA+AGG | - | chr8_1:69065460-69065479 | None:intergenic | 30.0% | |
| ATTAAGCTAGATTTGCCATT+AGG | + | chr8_1:69065569-69065588 | Msa1210250:intron | 30.0% | |
| ! | CTTCATATCTGGAATATGAT+AGG | + | chr8_1:69065899-69065918 | Msa1210250:intron | 30.0% |
| GAACAATCCCAATGAATATA+TGG | - | chr8_1:69065958-69065977 | None:intergenic | 30.0% | |
| !!! | ATTGGGATTGTTCTTTTTTC+AGG | + | chr8_1:69065965-69065984 | Msa1210250:intron | 30.0% |
| ! | TATGGTGATGTCTACAATAA+AGG | - | chr8_1:69066088-69066107 | None:intergenic | 30.0% |
| CTTGTTCAACCTTATCAAAT+TGG | - | chr8_1:69066142-69066161 | None:intergenic | 30.0% | |
| ATAAGGTTGAACAAGTCTAA+GGG | + | chr8_1:69066147-69066166 | Msa1210250:CDS | 30.0% | |
| AATGACACTGTTACAATACT+TGG | + | chr8_1:69066269-69066288 | Msa1210250:three_prime_UTR | 30.0% | |
| TGATATATACTTGAGCTGTG+AGG | + | chr8_1:69062850-69062869 | Msa1210250:five_prime_UTR | 35.0% | |
| TTCCAAGTGAGAATTTGAGA+TGG | + | chr8_1:69062937-69062956 | Msa1210250:exon | 35.0% | |
| TGAAAAGAAAGTTTACTGGG+TGG | + | chr8_1:69062997-69063016 | Msa1210250:CDS | 35.0% | |
| ATACTTTAGACTTCAGTGCA+TGG | + | chr8_1:69063268-69063287 | Msa1210250:intron | 35.0% | |
| ! | TCGACAAACTAACAGGTTTT+TGG | - | chr8_1:69063422-69063441 | None:intergenic | 35.0% |
| ATTGAACTAAGGTTGAACTG+CGG | + | chr8_1:69063472-69063491 | Msa1210250:intron | 35.0% | |
| GTTAAGCATTCTTTGCATGA+TGG | - | chr8_1:69063666-69063685 | None:intergenic | 35.0% | |
| TTGTTGAAAACGACATCTAG+AGG | - | chr8_1:69063695-69063714 | None:intergenic | 35.0% | |
| GTAGAGAACAAGAAAATGCA+TGG | - | chr8_1:69063739-69063758 | None:intergenic | 35.0% | |
| ACATCTTTACTCTTTAGGCA+TGG | + | chr8_1:69063768-69063787 | Msa1210250:intron | 35.0% | |
| ! | CCCACTTATAACCACTATTT+TGG | + | chr8_1:69063867-69063886 | Msa1210250:intron | 35.0% |
| GCCAAAATAGTGGTTATAAG+TGG | - | chr8_1:69063871-69063890 | None:intergenic | 35.0% | |
| GATTTACACTGCCAAAATAG+TGG | - | chr8_1:69063881-69063900 | None:intergenic | 35.0% | |
| GAAATTATGTGACAGAAGCA+CGG | + | chr8_1:69064089-69064108 | Msa1210250:intron | 35.0% | |
| ! | TACGAATGTTATAGGAGTGT+CGG | - | chr8_1:69064145-69064164 | None:intergenic | 35.0% |
| TACTTTGACACTTCTTGAAC+CGG | + | chr8_1:69064209-69064228 | Msa1210250:intron | 35.0% | |
| ! | ACTTTTGAATCTACTGTGTG+TGG | - | chr8_1:69064308-69064327 | None:intergenic | 35.0% |
| AGAAAGTTGTCTCTTACGAA+CGG | - | chr8_1:69064624-69064643 | None:intergenic | 35.0% | |
| GCATAAGGAAAAGAGGATTA+AGG | - | chr8_1:69064699-69064718 | None:intergenic | 35.0% | |
| ! | AATCCTCTTTTCCTTATGCT+TGG | + | chr8_1:69064700-69064719 | Msa1210250:intron | 35.0% |
| !! | GATCAACTCTTTAAGATGAC+TGG | + | chr8_1:69064779-69064798 | Msa1210250:CDS | 35.0% |
| GAATAATAGCTCCTACTACA+TGG | + | chr8_1:69064827-69064846 | Msa1210250:intron | 35.0% | |
| AGTTGAAAGATCAACTGATC+AGG | + | chr8_1:69064962-69064981 | Msa1210250:CDS | 35.0% | |
| GGAACTCAAGAAAAATGTGT+TGG | + | chr8_1:69065107-69065126 | Msa1210250:CDS | 35.0% | |
| AACAGTGTACCCAATTGAAA+AGG | + | chr8_1:69065139-69065158 | Msa1210250:CDS | 35.0% | |
| ATAAGAGAGATTCTCAGTTG+TGG | - | chr8_1:69065409-69065428 | None:intergenic | 35.0% | |
| AAAAATTTGCAGGTGCCTAA+TGG | - | chr8_1:69065587-69065606 | None:intergenic | 35.0% | |
| ! | GACGGATTTGAACCATATAT+TGG | - | chr8_1:69065722-69065741 | None:intergenic | 35.0% |
| TATGAAGCAAGAACACTCAT+CGG | - | chr8_1:69065886-69065905 | None:intergenic | 35.0% | |
| !!! | TTTTTTCAGGTAGCTGTTGA+TGG | + | chr8_1:69065978-69065997 | Msa1210250:intron | 35.0% |
| AATCAGTCCATCAAACTATG+TGG | + | chr8_1:69066049-69066068 | Msa1210250:CDS | 35.0% | |
| TCTGTTTGAAGATCTGAGTA+TGG | - | chr8_1:69066106-69066125 | None:intergenic | 35.0% | |
| TACTCAGATCTTCAAACAGA+AGG | + | chr8_1:69066106-69066125 | Msa1210250:CDS | 35.0% | |
| ACTCAGATCTTCAAACAGAA+GGG | + | chr8_1:69066107-69066126 | Msa1210250:CDS | 35.0% | |
| GATAAGGTTGAACAAGTCTA+AGG | + | chr8_1:69066146-69066165 | Msa1210250:CDS | 35.0% | |
| ACTATAATGCAACTTTGCAG+TGG | + | chr8_1:69066204-69066223 | Msa1210250:three_prime_UTR | 35.0% | |
| TGCCATCTCAAATTCTCACT+TGG | - | chr8_1:69062942-69062961 | None:intergenic | 40.0% | |
| ! | TTTGAGATGGCATCATTTGC+AGG | + | chr8_1:69062950-69062969 | Msa1210250:exon | 40.0% |
| TGACCGATTGAATCATGAGT+CGG | + | chr8_1:69063594-69063613 | Msa1210250:intron | 40.0% | |
| TCTCCGACTCATGATTCAAT+CGG | - | chr8_1:69063600-69063619 | None:intergenic | 40.0% | |
| TGGGAGTAACATTCACTCAT+GGG | - | chr8_1:69063851-69063870 | None:intergenic | 40.0% | |
| ! | ATCTAGAATTAGGTGTGTCG+CGG | + | chr8_1:69064116-69064135 | Msa1210250:intron | 40.0% |
| GTTATATATGTGTCGGACAC+CGG | - | chr8_1:69064231-69064250 | None:intergenic | 40.0% | |
| TGTTGATCAACGAAGGGTTA+TGG | + | chr8_1:69064345-69064364 | Msa1210250:intron | 40.0% | |
| !! | CTTTAAGATGACTGGCAGTT+TGG | + | chr8_1:69064787-69064806 | Msa1210250:CDS | 40.0% |
| ACAGGTCCAAGCATATAACA+AGG | + | chr8_1:69065067-69065086 | Msa1210250:intron | 40.0% | |
| ! | ATTTGTGTTGGTATGAGCTG+TGG | - | chr8_1:69065696-69065715 | None:intergenic | 40.0% |
| TCAAATCCGTCTGAAAAGCA+CGG | + | chr8_1:69065731-69065750 | Msa1210250:intron | 40.0% | |
| GAGTGTTCTTGCTTCATATC+TGG | + | chr8_1:69065888-69065907 | Msa1210250:intron | 40.0% | |
| ! | CTTACCATAAGACTTGCTTC+AGG | + | chr8_1:69066006-69066025 | Msa1210250:CDS | 40.0% |
| TCATGTGCCACATAGTTTGA+TGG | - | chr8_1:69066059-69066078 | None:intergenic | 40.0% | |
| GAAGCAAGCAAGAGACTCAT+TGG | + | chr8_1:69062903-69062922 | Msa1210250:five_prime_UTR | 45.0% | |
| TTCAGATGCCACCATTGCAA+GGG | + | chr8_1:69063061-69063080 | Msa1210250:CDS | 45.0% | |
| GTTGAACTGCGGTATGTAGT+TGG | + | chr8_1:69063483-69063502 | Msa1210250:intron | 45.0% | |
| GTGGGAGTAACATTCACTCA+TGG | - | chr8_1:69063852-69063871 | None:intergenic | 45.0% | |
| ! | GCACGGACACATCTAGAATT+AGG | + | chr8_1:69064106-69064125 | Msa1210250:intron | 45.0% |
| GCACCAAGCATAAGGAAAAG+AGG | - | chr8_1:69064706-69064725 | None:intergenic | 45.0% | |
| GCAAGAACACTCATCGGATT+AGG | - | chr8_1:69065880-69065899 | None:intergenic | 45.0% | |
| TGCACCTGAAGCAAGTCTTA+TGG | - | chr8_1:69066013-69066032 | None:intergenic | 45.0% | |
| ! | GGCATCTGAAGCAAGACTTG+TGG | - | chr8_1:69063051-69063070 | None:intergenic | 50.0% |
| CTTCAGATGCCACCATTGCA+AGG | + | chr8_1:69063060-69063079 | Msa1210250:CDS | 50.0% | |
| ATTCGTGTCAGTGTCGTGTC+AGG | + | chr8_1:69064583-69064602 | Msa1210250:intron | 50.0% | |
| ACTCAGCTGCACCAAGCATA+AGG | - | chr8_1:69064714-69064733 | None:intergenic | 50.0% | |
| ! | TATTATCCGTGTCGGCGTGT+CGG | - | chr8_1:69065780-69065799 | None:intergenic | 50.0% |
| ACTTGCTTCAGGTGCACACA+TGG | + | chr8_1:69066017-69066036 | Msa1210250:CDS | 50.0% | |
| TGAGTGTGCCCTTGCAATGG+TGG | - | chr8_1:69063072-69063091 | None:intergenic | 55.0% | |
| CCTTGAGTGTGCCCTTGCAA+TGG | - | chr8_1:69063075-69063094 | None:intergenic | 55.0% | |
| ! | CCATTGCAAGGGCACACTCA+AGG | + | chr8_1:69063072-69063091 | Msa1210250:CDS | 55.0% |
| ! | CGGTGTCCGTGCTTTTCAGA+CGG | - | chr8_1:69065740-69065759 | None:intergenic | 55.0% |
| ! | CGTCTGAAAAGCACGGACAC+CGG | + | chr8_1:69065738-69065757 | Msa1210250:intron | 55.0% |
| CGGTGTCTATGTCGTGTGTC+CGG | - | chr8_1:69065760-69065779 | None:intergenic | 55.0% | |
| TGCTTCAGGTGCACACATGG+AGG | + | chr8_1:69066020-69066039 | Msa1210250:CDS | 55.0% | |
| TAGACACCGACACGCCGACA+CGG | + | chr8_1:69065771-69065790 | Msa1210250:intron | 60.0% | |
| ACAGCGACGTGTGTCCGACA+CGG | + | chr8_1:69065847-69065866 | Msa1210250:intron | 60.0% | |
| GATTAGGCGTGTCCCCGTGT+CGG | - | chr8_1:69065864-69065883 | None:intergenic | 60.0% | |
| CAGCGACGTGTGTCCGACAC+GGG | + | chr8_1:69065848-69065867 | Msa1210250:intron | 65.0% | |
| AGCGACGTGTGTCCGACACG+GGG | + | chr8_1:69065849-69065868 | Msa1210250:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 69062771 | 69066345 | 69062771 | ID=Msa1210250;Name=Msa1210250 |
| chr8_1 | mRNA | 69062771 | 69066345 | 69062771 | ID=Msa1210250-mRNA-1;Parent=Msa1210250;Name=Msa1210250-mRNA-1;_AED=0.11;_eAED=0.11;_QI=185|1|1|1|1|1|5|179|181 |
| chr8_1 | exon | 69062771 | 69063093 | 69062771 | ID=Msa1210250-mRNA-1:exon:23079;Parent=Msa1210250-mRNA-1 |
| chr8_1 | exon | 69064728 | 69064824 | 69064728 | ID=Msa1210250-mRNA-1:exon:23080;Parent=Msa1210250-mRNA-1 |
| chr8_1 | exon | 69064943 | 69064983 | 69064943 | ID=Msa1210250-mRNA-1:exon:23081;Parent=Msa1210250-mRNA-1 |
| chr8_1 | exon | 69065071 | 69065160 | 69065071 | ID=Msa1210250-mRNA-1:exon:23082;Parent=Msa1210250-mRNA-1 |
| chr8_1 | exon | 69065987 | 69066345 | 69065987 | ID=Msa1210250-mRNA-1:exon:23083;Parent=Msa1210250-mRNA-1 |
| chr8_1 | five_prime_UTR | 69062771 | 69062955 | 69062771 | ID=Msa1210250-mRNA-1:five_prime_utr;Parent=Msa1210250-mRNA-1 |
| chr8_1 | CDS | 69062956 | 69063093 | 69062956 | ID=Msa1210250-mRNA-1:cds;Parent=Msa1210250-mRNA-1 |
| chr8_1 | CDS | 69064728 | 69064824 | 69064728 | ID=Msa1210250-mRNA-1:cds;Parent=Msa1210250-mRNA-1 |
| chr8_1 | CDS | 69064943 | 69064983 | 69064943 | ID=Msa1210250-mRNA-1:cds;Parent=Msa1210250-mRNA-1 |
| chr8_1 | CDS | 69065071 | 69065160 | 69065071 | ID=Msa1210250-mRNA-1:cds;Parent=Msa1210250-mRNA-1 |
| chr8_1 | CDS | 69065987 | 69066166 | 69065987 | ID=Msa1210250-mRNA-1:cds;Parent=Msa1210250-mRNA-1 |
| chr8_1 | three_prime_UTR | 69066167 | 69066345 | 69066167 | ID=Msa1210250-mRNA-1:three_prime_utr;Parent=Msa1210250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
