Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1251700 | XP_003628884.2 | 94.345 | 336 | 13 | 1 | 1 | 336 | 1 | 330 | 0.0 | 648 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1251700 | sp|P94538|YSGA_BACSU | 33.735 | 166 | 89 | 5 | 173 | 332 | 97 | 247 | 9.73e-22 | 95.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001460 | Msa1251700 | 0.800366 | 1.490878e-48 | -8.615850e-47 |
| Msa0001510 | Msa1251700 | 0.804332 | 2.273106e-49 | -8.615850e-47 |
| Msa0005690 | Msa1251700 | 0.848976 | 4.348421e-60 | -8.615850e-47 |
| Msa0008250 | Msa1251700 | 0.834416 | 3.034765e-56 | -8.615850e-47 |
| Msa0030400 | Msa1251700 | 0.817394 | 3.374337e-52 | -8.615850e-47 |
| Msa0046360 | Msa1251700 | 0.829015 | 6.520981e-55 | -8.615850e-47 |
| Msa0051600 | Msa1251700 | 0.821623 | 3.659389e-53 | -8.615850e-47 |
| Msa0072910 | Msa1251700 | 0.802041 | 6.772606e-49 | -8.615850e-47 |
| Msa0091340 | Msa1251700 | 0.825344 | 4.933301e-54 | -8.615850e-47 |
| Msa0094700 | Msa1251700 | 0.803143 | 4.012723e-49 | -8.615850e-47 |
| Msa0094990 | Msa1251700 | 0.804733 | 1.875166e-49 | -8.615850e-47 |
| Msa0096510 | Msa1251700 | 0.848567 | 5.645059e-60 | -8.615850e-47 |
| Msa0607440 | Msa1251700 | 0.819648 | 1.040104e-52 | -8.615850e-47 |
| Msa0610300 | Msa1251700 | 0.800217 | 1.598423e-48 | -8.615850e-47 |
| Msa0612730 | Msa1251700 | 0.831327 | 1.777587e-55 | -8.615850e-47 |
| Msa0618490 | Msa1251700 | 0.818190 | 2.231160e-52 | -8.615850e-47 |
| Msa0622690 | Msa1251700 | 0.802017 | 6.849114e-49 | -8.615850e-47 |
| Msa0650360 | Msa1251700 | 0.829376 | 5.328862e-55 | -8.615850e-47 |
| Msa0668160 | Msa1251700 | 0.806844 | 6.751153e-50 | -8.615850e-47 |
| Msa0702120 | Msa1251700 | 0.815189 | 1.050338e-51 | -8.615850e-47 |
| Msa0710950 | Msa1251700 | 0.812154 | 4.889382e-51 | -8.615850e-47 |
| Msa0748980 | Msa1251700 | 0.802313 | 5.953111e-49 | -8.615850e-47 |
| Msa0789800 | Msa1251700 | 0.807036 | 6.150208e-50 | -8.615850e-47 |
| Msa0791430 | Msa1251700 | 0.823134 | 1.630898e-53 | -8.615850e-47 |
| Msa0829430 | Msa1251700 | 0.818678 | 1.729016e-52 | -8.615850e-47 |
| Msa0840630 | Msa1251700 | 0.812392 | 4.339126e-51 | -8.615850e-47 |
| Msa0121080 | Msa1251700 | 0.802757 | 4.820984e-49 | -8.615850e-47 |
| Msa0126760 | Msa1251700 | 0.813085 | 3.059659e-51 | -8.615850e-47 |
| Msa0127080 | Msa1251700 | 0.812802 | 3.530227e-51 | -8.615850e-47 |
| Msa0131390 | Msa1251700 | 0.806859 | 6.702897e-50 | -8.615850e-47 |
| Msa0136040 | Msa1251700 | 0.809004 | 2.343742e-50 | -8.615850e-47 |
| Msa0146110 | Msa1251700 | 0.802366 | 5.805646e-49 | -8.615850e-47 |
| Msa0173760 | Msa1251700 | 0.818069 | 2.376171e-52 | -8.615850e-47 |
| Msa0177490 | Msa1251700 | 0.805242 | 1.467275e-49 | -8.615850e-47 |
| Msa0183650 | Msa1251700 | 0.807189 | 5.706371e-50 | -8.615850e-47 |
| Msa0195670 | Msa1251700 | 0.806791 | 6.929011e-50 | -8.615850e-47 |
| Msa0226800 | Msa1251700 | 0.806153 | 9.445784e-50 | -8.615850e-47 |
| Msa0236350 | Msa1251700 | 0.805687 | 1.183311e-49 | -8.615850e-47 |
| Msa1230190 | Msa1251700 | 0.810847 | 9.403646e-51 | -8.615850e-47 |
| Msa1237750 | Msa1251700 | 0.837580 | 4.780935e-57 | -8.615850e-47 |
| Msa1251700 | Msa1254990 | 0.835000 | 2.164934e-56 | -8.615850e-47 |
| Msa1251700 | Msa1277830 | 0.810996 | 8.732081e-51 | -8.615850e-47 |
| Msa1251700 | Msa1277930 | 0.806872 | 6.660711e-50 | -8.615850e-47 |
| Msa1251700 | Msa1279340 | 0.807930 | 3.973429e-50 | -8.615850e-47 |
| Msa1251700 | Msa1295220 | 0.803149 | 4.001785e-49 | -8.615850e-47 |
| Msa1251700 | Msa1316720 | 0.811702 | 6.133988e-51 | -8.615850e-47 |
| Msa1251700 | Msa1334020 | 0.828108 | 1.079996e-54 | -8.615850e-47 |
| Msa1251700 | Msa1339520 | 0.800711 | 1.267950e-48 | -8.615850e-47 |
| Msa1251700 | Msa1346220 | 0.805984 | 1.025063e-49 | -8.615850e-47 |
| Msa1251700 | Msa1351370 | 0.802103 | 6.576926e-49 | -8.615850e-47 |
| Msa1251700 | Msa1353270 | 0.805353 | 1.390519e-49 | -8.615850e-47 |
| Msa1251700 | Msa1356730 | 0.806125 | 9.575347e-50 | -8.615850e-47 |
| Msa1251700 | Msa1388610 | 0.838578 | 2.646896e-57 | -8.615850e-47 |
| Msa1251700 | Msa1393550 | 0.811851 | 5.694446e-51 | -8.615850e-47 |
| Msa1251700 | Msa1395640 | 0.813785 | 2.146609e-51 | -8.615850e-47 |
| Msa1251700 | Msa1413360 | 0.814179 | 1.757519e-51 | -8.615850e-47 |
| Msa1251700 | Msa1418780 | 0.824692 | 7.032436e-54 | -8.615850e-47 |
| Msa1251700 | Msa1426310 | 0.811048 | 8.505680e-51 | -8.615850e-47 |
| Msa1251700 | Msa1431240 | 0.850060 | 2.167244e-60 | -8.615850e-47 |
| Msa1251700 | Msa1432250 | 0.808770 | 2.630398e-50 | -8.615850e-47 |
| Msa1251700 | Msa1438780 | 0.843270 | 1.553137e-58 | -8.615850e-47 |
| Msa1251700 | Msa1440980 | 0.816606 | 5.069852e-52 | -8.615850e-47 |
| Msa1251700 | Msa1451780 | 0.813375 | 2.642979e-51 | -8.615850e-47 |
| Msa1251700 | Msa1455120 | 0.813064 | 3.092845e-51 | -8.615850e-47 |
| Msa1251700 | Msa1455180 | 0.810028 | 1.412986e-50 | -8.615850e-47 |
| Msa0373130 | Msa1251700 | 0.819424 | 1.170042e-52 | -8.615850e-47 |
| Msa0381990 | Msa1251700 | 0.800407 | 1.462521e-48 | -8.615850e-47 |
| Msa0387790 | Msa1251700 | 0.816670 | 4.907479e-52 | -8.615850e-47 |
| Msa0390840 | Msa1251700 | 0.803106 | 4.083108e-49 | -8.615850e-47 |
| Msa0393140 | Msa1251700 | 0.800542 | 1.372746e-48 | -8.615850e-47 |
| Msa0396970 | Msa1251700 | 0.801314 | 9.545245e-49 | -8.615850e-47 |
| Msa0397000 | Msa1251700 | 0.800468 | 1.420790e-48 | -8.615850e-47 |
| Msa0400900 | Msa1251700 | 0.856504 | 3.077584e-62 | -8.615850e-47 |
| Msa0421720 | Msa1251700 | 0.827545 | 1.474626e-54 | -8.615850e-47 |
| Msa0447830 | Msa1251700 | 0.803591 | 3.240477e-49 | -8.615850e-47 |
| Msa0459920 | Msa1251700 | 0.805689 | 1.182556e-49 | -8.615850e-47 |
| Msa0467080 | Msa1251700 | 0.805211 | 1.489626e-49 | -8.615850e-47 |
| Msa0467710 | Msa1251700 | 0.808264 | 3.373628e-50 | -8.615850e-47 |
| Msa0475740 | Msa1251700 | 0.804327 | 2.277855e-49 | -8.615850e-47 |
| Msa1014700 | Msa1251700 | 0.809803 | 1.579580e-50 | -8.615850e-47 |
| Msa1015020 | Msa1251700 | 0.806746 | 7.082532e-50 | -8.615850e-47 |
| Msa1028720 | Msa1251700 | 0.838291 | 3.138749e-57 | -8.615850e-47 |
| Msa1028780 | Msa1251700 | 0.802655 | 5.059848e-49 | -8.615850e-47 |
| Msa1030440 | Msa1251700 | 0.802630 | 5.120753e-49 | -8.615850e-47 |
| Msa1067710 | Msa1251700 | 0.813707 | 2.233310e-51 | -8.615850e-47 |
| Msa1081850 | Msa1251700 | 0.802934 | 4.432157e-49 | -8.615850e-47 |
| Msa1084210 | Msa1251700 | 0.801716 | 7.896880e-49 | -8.615850e-47 |
| Msa0239980 | Msa1251700 | 0.817205 | 3.721344e-52 | -8.615850e-47 |
| Msa0258380 | Msa1251700 | 0.825566 | 4.370801e-54 | -8.615850e-47 |
| Msa0258410 | Msa1251700 | 0.825644 | 4.188445e-54 | -8.615850e-47 |
| Msa0270840 | Msa1251700 | 0.820946 | 5.241297e-53 | -8.615850e-47 |
| Msa0274870 | Msa1251700 | 0.814565 | 1.444097e-51 | -8.615850e-47 |
| Msa0303950 | Msa1251700 | 0.804928 | 1.707298e-49 | -8.615850e-47 |
| Msa0312780 | Msa1251700 | 0.813214 | 2.867078e-51 | -8.615850e-47 |
| Msa0321230 | Msa1251700 | 0.816815 | 4.551277e-52 | -8.615850e-47 |
| Msa0335740 | Msa1251700 | 0.812247 | 4.665728e-51 | -8.615850e-47 |
| Msa0340440 | Msa1251700 | 0.806318 | 8.720998e-50 | -8.615850e-47 |
| Msa0352200 | Msa1251700 | 0.810084 | 1.374298e-50 | -8.615850e-47 |
| Msa0358720 | Msa1251700 | 0.816255 | 6.076427e-52 | -8.615850e-47 |
| Msa1130730 | Msa1251700 | 0.801417 | 9.091894e-49 | -8.615850e-47 |
| Msa1145370 | Msa1251700 | 0.803026 | 4.242910e-49 | -8.615850e-47 |
| Msa1151970 | Msa1251700 | 0.825932 | 3.580072e-54 | -8.615850e-47 |
| Msa1157030 | Msa1251700 | 0.804919 | 1.714026e-49 | -8.615850e-47 |
| Msa1182400 | Msa1251700 | 0.813177 | 2.920795e-51 | -8.615850e-47 |
| Msa1183730 | Msa1251700 | 0.807352 | 5.271471e-50 | -8.615850e-47 |
| Msa1206560 | Msa1251700 | 0.823935 | 1.059371e-53 | -8.615850e-47 |
| Msa1215790 | Msa1251700 | 0.802232 | 6.186205e-49 | -8.615850e-47 |
| Msa1221540 | Msa1251700 | 0.819571 | 1.082758e-52 | -8.615850e-47 |
| Msa0512310 | Msa1251700 | 0.825372 | 4.859853e-54 | -8.615850e-47 |
| Msa0524510 | Msa1251700 | 0.813435 | 2.563269e-51 | -8.615850e-47 |
| Msa0525800 | Msa1251700 | 0.823603 | 1.267485e-53 | -8.615850e-47 |
| Msa0528740 | Msa1251700 | 0.822239 | 2.635030e-53 | -8.615850e-47 |
| Msa0537960 | Msa1251700 | 0.800364 | 1.491759e-48 | -8.615850e-47 |
| Msa0569290 | Msa1251700 | 0.803879 | 2.823333e-49 | -8.615850e-47 |
| Msa0569930 | Msa1251700 | 0.809788 | 1.591532e-50 | -8.615850e-47 |
| Msa0572820 | Msa1251700 | 0.835775 | 1.378903e-56 | -8.615850e-47 |
| Msa0573970 | Msa1251700 | 0.831306 | 1.799272e-55 | -8.615850e-47 |
| Msa0846070 | Msa1251700 | 0.828843 | 7.174457e-55 | -8.615850e-47 |
| Msa0853920 | Msa1251700 | 0.809261 | 2.064729e-50 | -8.615850e-47 |
| Msa0901140 | Msa1251700 | 0.802040 | 6.776011e-49 | -8.615850e-47 |
| Msa0909720 | Msa1251700 | 0.802830 | 4.658110e-49 | -8.615850e-47 |
| Msa0938370 | Msa1251700 | 0.839218 | 1.807060e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1251700 | MtrunA17_Chr8g0367171 | 94.345 | 336 | 13 | 1 | 1 | 336 | 1 | 330 | 0.0 | 648 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1251700 | AT4G38020.1 | 66.904 | 281 | 89 | 2 | 56 | 332 | 69 | 349 | 6.75e-138 | 395 |
Find 77 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTGTCTCTCATCAGTTTA+AGG | 0.173197 | 8_2:-48153121 | None:intergenic |
| ATCAAATTTCCCCAAGATTA+AGG | 0.204964 | 8_2:-48153070 | None:intergenic |
| AGAAAATATTATTTGTTCTT+TGG | 0.214392 | 8_2:-48153015 | None:intergenic |
| ATCTTGGGGAAATTTGATTT+TGG | 0.247826 | 8_2:+48153075 | Msa1251700:three_prime_UTR |
| CATGGTTCTGTTCTTGTTGT+TGG | 0.254929 | 8_2:+48148838 | Msa1251700:CDS |
| GCACAATGGTGTATCTAATA+TGG | 0.255504 | 8_2:-48152854 | None:intergenic |
| TTTAGTCCTTGATGGAATTC+AGG | 0.283941 | 8_2:+48150540 | Msa1251700:CDS |
| TTTCAACTCCCTATAGTTTC+CGG | 0.307983 | 8_2:+48152712 | Msa1251700:CDS |
| TTGGGAATTTCAGCCTTATC+AGG | 0.317783 | 8_2:-48150334 | None:intergenic |
| TCACTCAATGTTTCAGTTGC+AGG | 0.332802 | 8_2:+48152967 | Msa1251700:CDS |
| TCACAAGCTCACATGCTTGC+AGG | 0.336171 | 8_2:-48152918 | None:intergenic |
| GAGAAATTCGTTGCTCTTGT+TGG | 0.339098 | 8_2:-48148717 | None:intergenic |
| TTGTTTAATTCTTCCTGATA+AGG | 0.346817 | 8_2:+48150321 | Msa1251700:CDS |
| TTCCGGAAGTTGGAATCATT+TGG | 0.348466 | 8_2:+48152729 | Msa1251700:CDS |
| TTCCAAATGAAGTTGCTTGC+TGG | 0.349311 | 8_2:+48152769 | Msa1251700:CDS |
| TTCCAAATGATTCCAACTTC+CGG | 0.350690 | 8_2:-48152731 | None:intergenic |
| GCCCAGCAAGCAACTTCATT+TGG | 0.353611 | 8_2:-48152771 | None:intergenic |
| TCCCTATAGTTTCCGGAAGT+TGG | 0.354050 | 8_2:+48152719 | Msa1251700:CDS |
| GACAACAAACAAACAACATT+TGG | 0.362523 | 8_2:-48153099 | None:intergenic |
| TTGTTGGCACTACACCTATC+AGG | 0.368135 | 8_2:+48148854 | Msa1251700:CDS |
| ATTTCTGTTTGTTCCTTCTT+CGG | 0.375164 | 8_2:-48148580 | None:intergenic |
| GCGCAGATGGAAACCACTTC+TGG | 0.375633 | 8_2:-48150510 | None:intergenic |
| TTGAGACAGTGTTTCACAAA+TGG | 0.395579 | 8_2:-48148784 | None:intergenic |
| ATAGTGATGAGAAAGATTTC+AGG | 0.397455 | 8_2:+48150400 | Msa1251700:CDS |
| TCCAACTTCCGGAAACTATA+GGG | 0.404665 | 8_2:-48152720 | None:intergenic |
| TGAAATCTTTCTCATCACTA+TGG | 0.405370 | 8_2:-48150398 | None:intergenic |
| CGGAGTGCTTTCTCGTTGAA+TGG | 0.407160 | 8_2:-48152670 | None:intergenic |
| TTCCAACTTCCGGAAACTAT+AGG | 0.407679 | 8_2:-48152721 | None:intergenic |
| AGAAATTCGTTGCTCTTGTT+GGG | 0.412771 | 8_2:-48148716 | None:intergenic |
| GATCAGCTGTGGCCTTCAAA+TGG | 0.421077 | 8_2:+48151470 | Msa1251700:CDS |
| CATCGTGTTCTGTGGGTTTG+AGG | 0.424529 | 8_2:-48148643 | None:intergenic |
| TCCAAATGAAGTTGCTTGCT+GGG | 0.428331 | 8_2:+48152770 | Msa1251700:CDS |
| AATGAAAATTAGAACCTGAT+AGG | 0.464064 | 8_2:-48148868 | None:intergenic |
| GTGGATTCATTCAACCCATT+GGG | 0.465000 | 8_2:-48150352 | None:intergenic |
| TGAGACAGTGTTTCACAAAT+GGG | 0.466462 | 8_2:-48148783 | None:intergenic |
| AGCAATGTACCGAGGTTACC+TGG | 0.478339 | 8_2:-48151445 | None:intergenic |
| AATTGTTCACTGCAGGATCC+AGG | 0.480049 | 8_2:+48151427 | Msa1251700:intron |
| GGAGTAACCGAAAGTCTTGT+TGG | 0.486290 | 8_2:-48148673 | None:intergenic |
| TCTTCTTATCGTCGCTCTCA+TGG | 0.487765 | 8_2:+48148820 | Msa1251700:CDS |
| ATTAGATACACCATTGTGCT+TGG | 0.489224 | 8_2:+48152858 | Msa1251700:CDS |
| CACAAGCTCACATGCTTGCA+GGG | 0.489262 | 8_2:-48152917 | None:intergenic |
| AGGATGCGCCTCGGCTAGCT+CGG | 0.489834 | 8_2:-48152690 | None:intergenic |
| ATAATAACTTACCCATTTGA+AGG | 0.490906 | 8_2:-48151482 | None:intergenic |
| ATCAGCTGTGGCCTTCAAAT+GGG | 0.491246 | 8_2:+48151471 | Msa1251700:CDS |
| TTATTTACAGAGAAATCTAC+AGG | 0.495436 | 8_2:+48150260 | Msa1251700:intron |
| AGTGGATTCATTCAACCCAT+TGG | 0.495802 | 8_2:-48150353 | None:intergenic |
| ACTAAAATCCGATGCGCAGA+TGG | 0.499079 | 8_2:-48150523 | None:intergenic |
| ATCACAGAAGCTTTGAGAAA+GGG | 0.502364 | 8_2:-48152830 | None:intergenic |
| AACAGAGGAAGAACCGAAGA+AGG | 0.513684 | 8_2:+48148567 | None:intergenic |
| TGTGGGTTTGAGGATAGAAA+AGG | 0.519707 | 8_2:-48148633 | None:intergenic |
| CTGGGCATCCACAGCATGAA+GGG | 0.525650 | 8_2:+48152788 | Msa1251700:CDS |
| CTTTGAGAAAGGGAACAAAC+CGG | 0.534121 | 8_2:-48152820 | None:intergenic |
| GGTGAAAACATCGTGTTCTG+TGG | 0.536073 | 8_2:-48148651 | None:intergenic |
| AATCACAGAAGCTTTGAGAA+AGG | 0.539971 | 8_2:-48152831 | None:intergenic |
| GAGTAACCGAAAGTCTTGTT+GGG | 0.541873 | 8_2:-48148672 | None:intergenic |
| TTGAATGGATCACAGCATCC+AGG | 0.550903 | 8_2:-48152655 | None:intergenic |
| ATCAAAAGCACTGCCAGAAG+TGG | 0.554660 | 8_2:+48150497 | Msa1251700:CDS |
| GCTGGGCATCCACAGCATGA+AGG | 0.558043 | 8_2:+48152787 | Msa1251700:CDS |
| AAGGAAAGTACAGTGAGTGT+TGG | 0.558909 | 8_2:-48148614 | None:intergenic |
| CTCAATGTTTCAGTTGCAGG+TGG | 0.571803 | 8_2:+48152970 | Msa1251700:CDS |
| TTGATTAACCCTTCATGCTG+TGG | 0.573547 | 8_2:-48152796 | None:intergenic |
| ATAAGGCTGAAATTCCCAAT+GGG | 0.575863 | 8_2:+48150338 | Msa1251700:CDS |
| GCATGAAGGGTTAATCAAGC+CGG | 0.582434 | 8_2:+48152801 | Msa1251700:CDS |
| AGTGGTTTCCATCTGCGCAT+CGG | 0.584870 | 8_2:+48150515 | Msa1251700:CDS |
| GTGAAAACATCGTGTTCTGT+GGG | 0.589424 | 8_2:-48148650 | None:intergenic |
| CTTGTGAGCATTGCAATGAC+AGG | 0.603906 | 8_2:+48152934 | Msa1251700:CDS |
| GAGTCACCTGAATTCCATCA+AGG | 0.604011 | 8_2:-48150546 | None:intergenic |
| GATAAGGCTGAAATTCCCAA+TGG | 0.606196 | 8_2:+48150337 | Msa1251700:CDS |
| TACATTGCTCAGATCAGCTG+TGG | 0.607696 | 8_2:+48151459 | Msa1251700:CDS |
| AAAGCACTCCGAGCTAGCCG+AGG | 0.621443 | 8_2:+48152682 | Msa1251700:CDS |
| GGAGTTGAAAGGATGCGCCT+CGG | 0.626018 | 8_2:-48152699 | None:intergenic |
| GACACGCACAATAGAATCAG+TGG | 0.627366 | 8_2:-48150371 | None:intergenic |
| GGAAACTATAGGGAGTTGAA+AGG | 0.629169 | 8_2:-48152710 | None:intergenic |
| CTGCAGGATCCAGGTAACCT+CGG | 0.657699 | 8_2:+48151436 | Msa1251700:intron |
| TTGTATTTAATAAAACAGTG+TGG | 0.672064 | 8_2:-48153143 | None:intergenic |
| CTGCCTAAAACCAAGCACAA+TGG | 0.679001 | 8_2:-48152868 | None:intergenic |
| CTGATCTGAGCAATGTACCG+AGG | 0.714931 | 8_2:-48151453 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTAAATTTTTTATATAGG+AGG | - | chr8_2:48151934-48151953 | None:intergenic | 10.0% |
| !!! | AATATTTTATCATAGAAAAT+GGG | - | chr8_2:48152431-48152450 | None:intergenic | 10.0% |
| !!! | AAATATTTTATCATAGAAAA+TGG | - | chr8_2:48152432-48152451 | None:intergenic | 10.0% |
| !! | TTTGTATAGAAAAAACAAAA+AGG | - | chr8_2:48148897-48148916 | None:intergenic | 15.0% |
| !!! | TTTTTTCTATACAAAGTATT+TGG | + | chr8_2:48148902-48148921 | Msa1251700:intron | 15.0% |
| !!! | ATATTTTATCATAGAAAATG+GGG | - | chr8_2:48152430-48152449 | None:intergenic | 15.0% |
| !! | ATAACAATTGAAATATTACA+TGG | - | chr8_2:48152580-48152599 | None:intergenic | 15.0% |
| !!! | AATTAATTTATTTTGTCAAC+AGG | + | chr8_2:48152615-48152634 | Msa1251700:intron | 15.0% |
| !! | AGAAAATATTATTTGTTCTT+TGG | - | chr8_2:48153018-48153037 | None:intergenic | 15.0% |
| !!! | GTTTTTGTTTTTGATTCTTA+TGG | + | chr8_2:48148937-48148956 | Msa1251700:intron | 20.0% |
| !! | TAATCTTATGAATTGGAAAA+TGG | + | chr8_2:48148986-48149005 | Msa1251700:intron | 20.0% |
| !! | TAAAAGTTAATTGCACATTA+AGG | + | chr8_2:48149133-48149152 | Msa1251700:intron | 20.0% |
| !!! | AAAATAGTGGATATTTGATA+AGG | + | chr8_2:48149169-48149188 | Msa1251700:intron | 20.0% |
| !! | TTGTTTGAATTTGTAATGTT+TGG | + | chr8_2:48149255-48149274 | Msa1251700:intron | 20.0% |
| !! | TTTGTAATGTTTGGTAAAAT+TGG | + | chr8_2:48149264-48149283 | Msa1251700:intron | 20.0% |
| !! | TTTATTTCAATTAAGATTGC+AGG | + | chr8_2:48149313-48149332 | Msa1251700:intron | 20.0% |
| !! | TTATTTCAATTAAGATTGCA+GGG | + | chr8_2:48149314-48149333 | Msa1251700:intron | 20.0% |
| !!! | TTTTGATAAAAATTGTGGTA+CGG | + | chr8_2:48149816-48149835 | Msa1251700:intron | 20.0% |
| !!! | ATTATTGGTTGTTTGTTTAA+TGG | + | chr8_2:48149841-48149860 | Msa1251700:intron | 20.0% |
| !! | ACAATGTATACAATATTCAA+TGG | + | chr8_2:48150173-48150192 | Msa1251700:intron | 20.0% |
| !! | ACAAGATAAAAATGTTACAA+TGG | + | chr8_2:48150297-48150316 | Msa1251700:CDS | 20.0% |
| !! | ATAACCATGTATACATTATA+AGG | - | chr8_2:48150715-48150734 | None:intergenic | 20.0% |
| !! | ATATAAAGTTGACAAAAAAG+TGG | - | chr8_2:48150909-48150928 | None:intergenic | 20.0% |
| !!! | ATGACTTGAATCTTTATTTT+AGG | + | chr8_2:48150959-48150978 | Msa1251700:intron | 20.0% |
| !!! | AAAATTTTGCGTTTGATTTA+TGG | - | chr8_2:48151210-48151229 | None:intergenic | 20.0% |
| !! | TTGTTGGAATACTAATTATT+TGG | + | chr8_2:48151312-48151331 | Msa1251700:intron | 20.0% |
| !! | ATTAACCAAATAAGAATGAT+TGG | - | chr8_2:48151740-48151759 | None:intergenic | 20.0% |
| !! | AAGTTCATAAATGATCTATA+AGG | - | chr8_2:48152505-48152524 | None:intergenic | 20.0% |
| !! | ATATCATAAAATGATCAGTT+CGG | - | chr8_2:48152537-48152556 | None:intergenic | 20.0% |
| !!! | ATTGTTATTAAAAATCGTGA+AGG | + | chr8_2:48152592-48152611 | Msa1251700:intron | 20.0% |
| !!! | TTTTTTTATCTCCTTAATCT+TGG | + | chr8_2:48153059-48153078 | Msa1251700:three_prime_UTR | 20.0% |
| !!! | TTTTTTATCTCCTTAATCTT+GGG | + | chr8_2:48153060-48153079 | Msa1251700:three_prime_UTR | 20.0% |
| !! | TTGTATTTAATAAAACAGTG+TGG | - | chr8_2:48153146-48153165 | None:intergenic | 20.0% |
| ! | AATGAAAATTAGAACCTGAT+AGG | - | chr8_2:48148871-48148890 | None:intergenic | 25.0% |
| ! | TGTAGTCTAATCTTATGAAT+TGG | + | chr8_2:48148979-48148998 | Msa1251700:intron | 25.0% |
| !! | AAAACCTGATTTTGAATGAT+TGG | + | chr8_2:48149061-48149080 | Msa1251700:intron | 25.0% |
| !! | GAATATAAGGTGATTTTGTT+AGG | + | chr8_2:48149099-48149118 | Msa1251700:intron | 25.0% |
| !! | CTTTGTTTGGTAAAAAATAG+TGG | + | chr8_2:48149156-48149175 | Msa1251700:intron | 25.0% |
| ! | TTTGATAAGGTAACTTATAG+CGG | + | chr8_2:48149182-48149201 | Msa1251700:intron | 25.0% |
| ! | TATTTCAATTAAGATTGCAG+GGG | + | chr8_2:48149315-48149334 | Msa1251700:intron | 25.0% |
| ! | TAAAAATGAGAGTTACCAAA+CGG | + | chr8_2:48149431-48149450 | Msa1251700:intron | 25.0% |
| !! | TTTTATCAAAATCCTGATCA+TGG | - | chr8_2:48149807-48149826 | None:intergenic | 25.0% |
| !!! | CAGGATTTTGATAAAAATTG+TGG | + | chr8_2:48149811-48149830 | Msa1251700:intron | 25.0% |
| !!! | AAATGCTTTTAGAGTATGAT+TGG | - | chr8_2:48150107-48150126 | None:intergenic | 25.0% |
| ! | TTATTTACAGAGAAATCTAC+AGG | + | chr8_2:48150260-48150279 | Msa1251700:intron | 25.0% |
| ! | TTGTTTAATTCTTCCTGATA+AGG | + | chr8_2:48150321-48150340 | Msa1251700:CDS | 25.0% |
| !! | AGATTTAACGATTTTTGTCT+TGG | + | chr8_2:48150583-48150602 | Msa1251700:intron | 25.0% |
| ! | ATCAAATGACAAATGAAAAG+TGG | - | chr8_2:48150937-48150956 | None:intergenic | 25.0% |
| ! | TCAAATAAAGTTTGCAATCA+TGG | - | chr8_2:48151119-48151138 | None:intergenic | 25.0% |
| ! | ATAATAACTTACCCATTTGA+AGG | - | chr8_2:48151485-48151504 | None:intergenic | 25.0% |
| ! | ACAAATGCATAATATATGCA+AGG | + | chr8_2:48151614-48151633 | Msa1251700:intron | 25.0% |
| ! | TGAATAAGATTAACCTTCTA+CGG | - | chr8_2:48151822-48151841 | None:intergenic | 25.0% |
| ! | TTATCATACACCTATTTCAA+AGG | - | chr8_2:48151849-48151868 | None:intergenic | 25.0% |
| !! | ATAGGTGTATGATAATCTTT+TGG | + | chr8_2:48151854-48151873 | Msa1251700:intron | 25.0% |
| !!! | AATTTATTTTGTCAACAGGA+TGG | + | chr8_2:48152619-48152638 | Msa1251700:intron | 25.0% |
| !! | TTTTTATCTCCTTAATCTTG+GGG | + | chr8_2:48153061-48153080 | Msa1251700:three_prime_UTR | 25.0% |
| ATTTCTGTTTGTTCCTTCTT+CGG | - | chr8_2:48148583-48148602 | None:intergenic | 30.0% | |
| ! | GATTCTTATGGTCTTTTCTT+TGG | + | chr8_2:48148949-48148968 | Msa1251700:intron | 30.0% |
| !! | TATGGTCTTTTCTTTGGTTT+TGG | + | chr8_2:48148955-48148974 | Msa1251700:intron | 30.0% |
| ! | AATGTGTTATTGTGTGTGTT+TGG | + | chr8_2:48149022-48149041 | Msa1251700:intron | 30.0% |
| TTATTGTGTGTGTTTGGTTA+TGG | + | chr8_2:48149028-48149047 | Msa1251700:intron | 30.0% | |
| TATTGTGTGTGTTTGGTTAT+GGG | + | chr8_2:48149029-48149048 | Msa1251700:intron | 30.0% | |
| TGAACCAATCATTCAAAATC+AGG | - | chr8_2:48149068-48149087 | None:intergenic | 30.0% | |
| ! | CATACGCTAAGTTGAATATA+AGG | + | chr8_2:48149086-48149105 | Msa1251700:intron | 30.0% |
| GTAATGTTTGGTAAAATTGG+CGG | + | chr8_2:48149267-48149286 | Msa1251700:intron | 30.0% | |
| ! | TTATTTTCACGAGCTTACAA+CGG | - | chr8_2:48149397-48149416 | None:intergenic | 30.0% |
| AAAAATGAGAGTTACCAAAC+GGG | + | chr8_2:48149432-48149451 | Msa1251700:intron | 30.0% | |
| ATGATTAAAAAAGACCCGTT+TGG | - | chr8_2:48149449-48149468 | None:intergenic | 30.0% | |
| TAATACACGCACTAAATTTG+AGG | + | chr8_2:48149513-48149532 | Msa1251700:intron | 30.0% | |
| TGACATGTTAAATAAACGTG+TGG | + | chr8_2:48149719-48149738 | Msa1251700:intron | 30.0% | |
| ATTCTTTCAAAGAACGTAGT+TGG | - | chr8_2:48149904-48149923 | None:intergenic | 30.0% | |
| TCTTTCAATGAGATATAGAG+AGG | - | chr8_2:48149942-48149961 | None:intergenic | 30.0% | |
| CCTACAAGAATAAAATGATG+AGG | - | chr8_2:48149989-48150008 | None:intergenic | 30.0% | |
| ! | CCTCATCATTTTATTCTTGT+AGG | + | chr8_2:48149986-48150005 | Msa1251700:intron | 30.0% |
| ! | CAGTTTAGAACAATTATGAG+AGG | + | chr8_2:48150016-48150035 | Msa1251700:intron | 30.0% |
| TGAAATCTTTCTCATCACTA+TGG | - | chr8_2:48150401-48150420 | None:intergenic | 30.0% | |
| ATAGTGATGAGAAAGATTTC+AGG | + | chr8_2:48150400-48150419 | Msa1251700:CDS | 30.0% | |
| GTCATCTAAGTTTGAAAAAC+TGG | - | chr8_2:48150476-48150495 | None:intergenic | 30.0% | |
| ATTCAGGTGACTCTTAATAT+CGG | + | chr8_2:48150556-48150575 | Msa1251700:intron | 30.0% | |
| ! | TGTCTTGGAAATTTTACCAT+CGG | + | chr8_2:48150598-48150617 | Msa1251700:intron | 30.0% |
| AACAAAAGCCAAATAAGGAA+TGG | - | chr8_2:48150651-48150670 | None:intergenic | 30.0% | |
| !!! | TTCCTTATTTGGCTTTTGTT+TGG | + | chr8_2:48150651-48150670 | Msa1251700:intron | 30.0% |
| ! | TGAGCCTTATAATGTATACA+TGG | + | chr8_2:48150708-48150727 | Msa1251700:intron | 30.0% |
| !! | ACAAGAGATTTGTATCGATT+TGG | - | chr8_2:48150786-48150805 | None:intergenic | 30.0% |
| TTCATCCTACATATATCATG+TGG | + | chr8_2:48151253-48151272 | Msa1251700:intron | 30.0% | |
| TCATCCTACATATATCATGT+GGG | + | chr8_2:48151254-48151273 | Msa1251700:intron | 30.0% | |
| ATTTCCCACATGATATATGT+AGG | - | chr8_2:48151261-48151280 | None:intergenic | 30.0% | |
| ! | AGAATATCATGGACTTTTGT+TGG | + | chr8_2:48151296-48151315 | Msa1251700:intron | 30.0% |
| ! | TCTGAAACTCAAAATTCTCA+TGG | - | chr8_2:48151377-48151396 | None:intergenic | 30.0% |
| ! | TATTTAGAATTGTTCACTGC+AGG | + | chr8_2:48151420-48151439 | Msa1251700:intron | 30.0% |
| AAGATTCCATAGAGAAAAAC+AGG | - | chr8_2:48151536-48151555 | None:intergenic | 30.0% | |
| GCTGGTATATCTTAAACATA+GGG | - | chr8_2:48151561-48151580 | None:intergenic | 30.0% | |
| AGCTGGTATATCTTAAACAT+AGG | - | chr8_2:48151562-48151581 | None:intergenic | 30.0% | |
| !!! | AAGCTGGTATGTCTTTTTTT+TGG | - | chr8_2:48151665-48151684 | None:intergenic | 30.0% |
| ATATTCCAATACAATGAAGC+TGG | - | chr8_2:48151681-48151700 | None:intergenic | 30.0% | |
| AACCAAATAAGAATGATTGG+TGG | - | chr8_2:48151737-48151756 | None:intergenic | 30.0% | |
| CTTATTTGGTTAATGTTGAC+TGG | + | chr8_2:48151746-48151765 | Msa1251700:intron | 30.0% | |
| !! | TAATGTTGACTGGCTTTAAA+TGG | + | chr8_2:48151756-48151775 | Msa1251700:intron | 30.0% |
| GAATAAGATTAACCTTCTAC+GGG | - | chr8_2:48151821-48151840 | None:intergenic | 30.0% | |
| !! | TATTCACCATCCTTTGAAAT+AGG | + | chr8_2:48151836-48151855 | Msa1251700:intron | 30.0% |
| ! | TTTTGGCATTAACAGTCAAA+GGG | + | chr8_2:48151871-48151890 | Msa1251700:intron | 30.0% |
| ! | GGTATTTTATTGAAGACCAA+TGG | - | chr8_2:48151976-48151995 | None:intergenic | 30.0% |
| ATCAAATTTCCCCAAGATTA+AGG | - | chr8_2:48153073-48153092 | None:intergenic | 30.0% | |
| !! | ATCTTGGGGAAATTTGATTT+TGG | + | chr8_2:48153075-48153094 | Msa1251700:three_prime_UTR | 30.0% |
| GACAACAAACAAACAACATT+TGG | - | chr8_2:48153102-48153121 | None:intergenic | 30.0% | |
| ! | TTTTCACCCAACAAGACTTT+CGG | + | chr8_2:48148666-48148685 | Msa1251700:CDS | 35.0% |
| !! | GTTTGTTGTTGTTGTTGTGA+TGG | - | chr8_2:48148697-48148716 | None:intergenic | 35.0% |
| AGAAATTCGTTGCTCTTGTT+GGG | - | chr8_2:48148719-48148738 | None:intergenic | 35.0% | |
| TGAGACAGTGTTTCACAAAT+GGG | - | chr8_2:48148786-48148805 | None:intergenic | 35.0% | |
| TTGAGACAGTGTTTCACAAA+TGG | - | chr8_2:48148787-48148806 | None:intergenic | 35.0% | |
| ATTGTGTGTGTTTGGTTATG+GGG | + | chr8_2:48149030-48149049 | Msa1251700:intron | 35.0% | |
| !! | TTGCACATTAAGGCTTTGTT+TGG | + | chr8_2:48149143-48149162 | Msa1251700:intron | 35.0% |
| ! | TATTTTCACGAGCTTACAAC+GGG | - | chr8_2:48149396-48149415 | None:intergenic | 35.0% |
| TCTAACATGACGCTAAAGTT+TGG | - | chr8_2:48149566-48149585 | None:intergenic | 35.0% | |
| !!! | ATGTTTGGTTCCACTTTTTG+AGG | - | chr8_2:48149660-48149679 | None:intergenic | 35.0% |
| GCACTAACTTAGAATTCACA+TGG | - | chr8_2:48149749-48149768 | None:intergenic | 35.0% | |
| !! | GATCATTTTGATCCATGATC+AGG | + | chr8_2:48149792-48149811 | Msa1251700:intron | 35.0% |
| AATTGTGGTACGGACATTAT+TGG | + | chr8_2:48149826-48149845 | Msa1251700:intron | 35.0% | |
| TGTGCACATTGATGTGAAAT+GGG | - | chr8_2:48150148-48150167 | None:intergenic | 35.0% | |
| CTAACTAAGAGAGATGAGTT+AGG | - | chr8_2:48150206-48150225 | None:intergenic | 35.0% | |
| ATAAGGCTGAAATTCCCAAT+GGG | + | chr8_2:48150338-48150357 | Msa1251700:CDS | 35.0% | |
| ! | ACTGGCAGGAATTTTCATAA+GGG | - | chr8_2:48150458-48150477 | None:intergenic | 35.0% |
| ! | AACTGGCAGGAATTTTCATA+AGG | - | chr8_2:48150459-48150478 | None:intergenic | 35.0% |
| TCTAAGTTTGAAAAACTGGC+AGG | - | chr8_2:48150472-48150491 | None:intergenic | 35.0% | |
| TTTAGTCCTTGATGGAATTC+AGG | + | chr8_2:48150540-48150559 | Msa1251700:CDS | 35.0% | |
| ATACTTCCTCAATTGAAAGG+AGG | + | chr8_2:48150621-48150640 | Msa1251700:intron | 35.0% | |
| GACCAAACAAAAGCCAAATA+AGG | - | chr8_2:48150656-48150675 | None:intergenic | 35.0% | |
| ! | TTGCTGCTTATTCTATGAAG+AGG | + | chr8_2:48150680-48150699 | Msa1251700:intron | 35.0% |
| AGGATTCATCATAGTGTATC+GGG | - | chr8_2:48150844-48150863 | None:intergenic | 35.0% | |
| CAGGATTCATCATAGTGTAT+CGG | - | chr8_2:48150845-48150864 | None:intergenic | 35.0% | |
| GTGTTTCATTAGTATGAACC+AGG | - | chr8_2:48150864-48150883 | None:intergenic | 35.0% | |
| TTTAAGTGCCTAGTTATGTC+AGG | + | chr8_2:48151176-48151195 | Msa1251700:intron | 35.0% | |
| TTTCACAACCTGACATAACT+AGG | - | chr8_2:48151187-48151206 | None:intergenic | 35.0% | |
| TTCTATGTCAATATCGCGAA+AGG | + | chr8_2:48151345-48151364 | Msa1251700:intron | 35.0% | |
| !! | TCTGATCCTGTTTTTCTCTA+TGG | + | chr8_2:48151527-48151546 | Msa1251700:intron | 35.0% |
| TGCATAATATATGCAAGGTC+CGG | + | chr8_2:48151619-48151638 | Msa1251700:intron | 35.0% | |
| !!! | GTATGTCTTTTTTTTGGTGG+TGG | - | chr8_2:48151659-48151678 | None:intergenic | 35.0% |
| !!! | CTGGTATGTCTTTTTTTTGG+TGG | - | chr8_2:48151662-48151681 | None:intergenic | 35.0% |
| ACATACCAGCTTCATTGTAT+TGG | + | chr8_2:48151673-48151692 | Msa1251700:intron | 35.0% | |
| !! | TGATTGGTGGTGTATAGATT+CGG | - | chr8_2:48151724-48151743 | None:intergenic | 35.0% |
| CACCACCAATCATTCTTATT+TGG | + | chr8_2:48151732-48151751 | Msa1251700:intron | 35.0% | |
| ! | TCTACGGGTTTGTTTGAAAA+GGG | - | chr8_2:48151806-48151825 | None:intergenic | 35.0% |
| ! | TTCTACGGGTTTGTTTGAAA+AGG | - | chr8_2:48151807-48151826 | None:intergenic | 35.0% |
| ! | TTTTCAAACAAACCCGTAGA+AGG | + | chr8_2:48151806-48151825 | Msa1251700:intron | 35.0% |
| CATACACCTATTTCAAAGGA+TGG | - | chr8_2:48151845-48151864 | None:intergenic | 35.0% | |
| ! | CTTTTGGCATTAACAGTCAA+AGG | + | chr8_2:48151870-48151889 | Msa1251700:intron | 35.0% |
| TTTCCTTGAGGAAGAAAATG+AGG | - | chr8_2:48151910-48151929 | None:intergenic | 35.0% | |
| TATGTATTGTCGTGTTCCAT+TGG | + | chr8_2:48151957-48151976 | Msa1251700:intron | 35.0% | |
| AGTACTAATTGACAGCAACT+AGG | - | chr8_2:48151997-48152016 | None:intergenic | 35.0% | |
| !! | TCAATTAGTACTGATGCCAA+TGG | + | chr8_2:48152005-48152024 | Msa1251700:intron | 35.0% |
| !! | CAATTAGTACTGATGCCAAT+GGG | + | chr8_2:48152006-48152025 | Msa1251700:intron | 35.0% |
| CACTACCATATAGATTCTAG+AGG | - | chr8_2:48152034-48152053 | None:intergenic | 35.0% | |
| AATCTTCCTACACTTTCTCT+TGG | - | chr8_2:48152097-48152116 | None:intergenic | 35.0% | |
| ! | AAGAGAAAGTGTAGGAAGAT+TGG | + | chr8_2:48152096-48152115 | Msa1251700:intron | 35.0% |
| AGAGACACACAATATTACAG+TGG | + | chr8_2:48152324-48152343 | Msa1251700:intron | 35.0% | |
| ! | AGCTTAGTTGACTCAGATAA+CGG | - | chr8_2:48152404-48152423 | None:intergenic | 35.0% |
| TTTCAACTCCCTATAGTTTC+CGG | + | chr8_2:48152712-48152731 | Msa1251700:CDS | 35.0% | |
| TTCCAAATGATTCCAACTTC+CGG | - | chr8_2:48152734-48152753 | None:intergenic | 35.0% | |
| !! | ATCACAGAAGCTTTGAGAAA+GGG | - | chr8_2:48152833-48152852 | None:intergenic | 35.0% |
| !! | AATCACAGAAGCTTTGAGAA+AGG | - | chr8_2:48152834-48152853 | None:intergenic | 35.0% |
| GCACAATGGTGTATCTAATA+TGG | - | chr8_2:48152857-48152876 | None:intergenic | 35.0% | |
| ATTAGATACACCATTGTGCT+TGG | + | chr8_2:48152858-48152877 | Msa1251700:CDS | 35.0% | |
| GTTTGTCTCTCATCAGTTTA+AGG | - | chr8_2:48153124-48153143 | None:intergenic | 35.0% | |
| ! | AAGGAAAGTACAGTGAGTGT+TGG | - | chr8_2:48148617-48148636 | None:intergenic | 40.0% |
| TGTGGGTTTGAGGATAGAAA+AGG | - | chr8_2:48148636-48148655 | None:intergenic | 40.0% | |
| GTGAAAACATCGTGTTCTGT+GGG | - | chr8_2:48148653-48148672 | None:intergenic | 40.0% | |
| !! | GAGTAACCGAAAGTCTTGTT+GGG | - | chr8_2:48148675-48148694 | None:intergenic | 40.0% |
| GAGAAATTCGTTGCTCTTGT+TGG | - | chr8_2:48148720-48148739 | None:intergenic | 40.0% | |
| ! | CATGGTTCTGTTCTTGTTGT+TGG | + | chr8_2:48148838-48148857 | Msa1251700:CDS | 40.0% |
| TTAAGATTGCAGGGGTAAGA+TGG | + | chr8_2:48149323-48149342 | Msa1251700:intron | 40.0% | |
| GGAGGCAAAATGAATTCTAG+AGG | - | chr8_2:48149639-48149658 | None:intergenic | 40.0% | |
| ! | CATTTTGCCTCCTCAAAAAG+TGG | + | chr8_2:48149647-48149666 | Msa1251700:intron | 40.0% |
| !!! | TTTGGTTCCACTTTTTGAGG+AGG | - | chr8_2:48149657-48149676 | None:intergenic | 40.0% |
| CATCATCTCGAGTGTATGTT+TGG | - | chr8_2:48149675-48149694 | None:intergenic | 40.0% | |
| ATACACTCGAGATGATGCAT+TGG | + | chr8_2:48149678-48149697 | Msa1251700:intron | 40.0% | |
| GATCAAAATGATCGCCTAGT+CGG | - | chr8_2:48149785-48149804 | None:intergenic | 40.0% | |
| ACACTTGTGTATGAACTTCG+AGG | - | chr8_2:48149867-48149886 | None:intergenic | 40.0% | |
| TGCTACTAAGCTTCAAAGCT+AGG | + | chr8_2:48150057-48150076 | Msa1251700:intron | 40.0% | |
| CTGTGCACATTGATGTGAAA+TGG | - | chr8_2:48150149-48150168 | None:intergenic | 40.0% | |
| ! | TTGGGAATTTCAGCCTTATC+AGG | - | chr8_2:48150337-48150356 | None:intergenic | 40.0% |
| GATAAGGCTGAAATTCCCAA+TGG | + | chr8_2:48150337-48150356 | Msa1251700:CDS | 40.0% | |
| GTGGATTCATTCAACCCATT+GGG | - | chr8_2:48150355-48150374 | None:intergenic | 40.0% | |
| ! | AGTGGATTCATTCAACCCAT+TGG | - | chr8_2:48150356-48150375 | None:intergenic | 40.0% |
| !! | CATCGGATTTTAGTCCTTGA+TGG | + | chr8_2:48150532-48150551 | Msa1251700:CDS | 40.0% |
| !! | TCAATTGAGGAAGTATCCGA+TGG | - | chr8_2:48150617-48150636 | None:intergenic | 40.0% |
| CGGATACTTCCTCAATTGAA+AGG | + | chr8_2:48150618-48150637 | Msa1251700:intron | 40.0% | |
| CGATACACTATGATGAATCC+TGG | + | chr8_2:48150843-48150862 | Msa1251700:intron | 40.0% | |
| GTTGACGATGCAGAATATCA+TGG | + | chr8_2:48151285-48151304 | Msa1251700:intron | 40.0% | |
| ATTATAGCAAGCAGAAACGC+AGG | - | chr8_2:48151508-48151527 | None:intergenic | 40.0% | |
| GCATAATATATGCAAGGTCC+GGG | + | chr8_2:48151620-48151639 | Msa1251700:intron | 40.0% | |
| CATAATATATGCAAGGTCCG+GGG | + | chr8_2:48151621-48151640 | Msa1251700:intron | 40.0% | |
| ! | CAACCTCATTTTCTTCCTCA+AGG | + | chr8_2:48151904-48151923 | Msa1251700:intron | 40.0% |
| TATATAGGAGGCTTTCCTTG+AGG | - | chr8_2:48151922-48151941 | None:intergenic | 40.0% | |
| ! | GAGAAACCAAGAGAAAGTGT+AGG | + | chr8_2:48152088-48152107 | Msa1251700:intron | 40.0% |
| ATAGAACGAGTTCAGAGAGA+AGG | + | chr8_2:48152123-48152142 | Msa1251700:intron | 40.0% | |
| TGCATTGCAGTTACAGACAA+GGG | + | chr8_2:48152234-48152253 | Msa1251700:intron | 40.0% | |
| GGAAACTATAGGGAGTTGAA+AGG | - | chr8_2:48152713-48152732 | None:intergenic | 40.0% | |
| TCCAACTTCCGGAAACTATA+GGG | - | chr8_2:48152723-48152742 | None:intergenic | 40.0% | |
| TTCCAACTTCCGGAAACTAT+AGG | - | chr8_2:48152724-48152743 | None:intergenic | 40.0% | |
| TTCCGGAAGTTGGAATCATT+TGG | + | chr8_2:48152729-48152748 | Msa1251700:CDS | 40.0% | |
| TTCCAAATGAAGTTGCTTGC+TGG | + | chr8_2:48152769-48152788 | Msa1251700:CDS | 40.0% | |
| TCCAAATGAAGTTGCTTGCT+GGG | + | chr8_2:48152770-48152789 | Msa1251700:CDS | 40.0% | |
| TTGATTAACCCTTCATGCTG+TGG | - | chr8_2:48152799-48152818 | None:intergenic | 40.0% | |
| ! | CTTTGAGAAAGGGAACAAAC+CGG | - | chr8_2:48152823-48152842 | None:intergenic | 40.0% |
| !! | ACACCATTGTGCTTGGTTTT+AGG | + | chr8_2:48152865-48152884 | Msa1251700:CDS | 40.0% |
| ! | CTTGCAGGGATTTTTCTGAA+AGG | - | chr8_2:48152906-48152925 | None:intergenic | 40.0% |
| TCACTCAATGTTTCAGTTGC+AGG | + | chr8_2:48152967-48152986 | Msa1251700:CDS | 40.0% | |
| GGTGAAAACATCGTGTTCTG+TGG | - | chr8_2:48148654-48148673 | None:intergenic | 45.0% | |
| ! | GGAGTAACCGAAAGTCTTGT+TGG | - | chr8_2:48148676-48148695 | None:intergenic | 45.0% |
| TCTTCTTATCGTCGCTCTCA+TGG | + | chr8_2:48148820-48148839 | Msa1251700:CDS | 45.0% | |
| TTGTTGGCACTACACCTATC+AGG | + | chr8_2:48148854-48148873 | Msa1251700:CDS | 45.0% | |
| CCTAGTCGGTCAAAACAATG+TGG | - | chr8_2:48149771-48149790 | None:intergenic | 45.0% | |
| !!! | CCACATTGTTTTGACCGACT+AGG | + | chr8_2:48149768-48149787 | Msa1251700:intron | 45.0% |
| GACACGCACAATAGAATCAG+TGG | - | chr8_2:48150374-48150393 | None:intergenic | 45.0% | |
| !! | ATCAAAAGCACTGCCAGAAG+TGG | + | chr8_2:48150497-48150516 | Msa1251700:CDS | 45.0% |
| ACTAAAATCCGATGCGCAGA+TGG | - | chr8_2:48150526-48150545 | None:intergenic | 45.0% | |
| GAGTCACCTGAATTCCATCA+AGG | - | chr8_2:48150549-48150568 | None:intergenic | 45.0% | |
| AATTGTTCACTGCAGGATCC+AGG | + | chr8_2:48151427-48151446 | Msa1251700:intron | 45.0% | |
| TACATTGCTCAGATCAGCTG+TGG | + | chr8_2:48151459-48151478 | Msa1251700:CDS | 45.0% | |
| ATCAGCTGTGGCCTTCAAAT+GGG | + | chr8_2:48151471-48151490 | Msa1251700:CDS | 45.0% | |
| ! | TGAGCTTAGCTCAGTTGGTA+GGG | + | chr8_2:48151591-48151610 | Msa1251700:intron | 45.0% |
| !!! | GTCTTTTTTTTGGTGGTGGC+CGG | - | chr8_2:48151655-48151674 | None:intergenic | 45.0% |
| ! | TAGATTCTAGAGGCTCCCAT+TGG | - | chr8_2:48152024-48152043 | None:intergenic | 45.0% |
| !! | GGGAGCCTCTAGAATCTATA+TGG | + | chr8_2:48152026-48152045 | Msa1251700:intron | 45.0% |
| ! | CTATATGGTAGTGATGCCCA+TGG | + | chr8_2:48152041-48152060 | Msa1251700:intron | 45.0% |
| CTGCATTGCAGTTACAGACA+AGG | + | chr8_2:48152233-48152252 | Msa1251700:intron | 45.0% | |
| GCATTGCAGTTACAGACAAG+GGG | + | chr8_2:48152235-48152254 | Msa1251700:intron | 45.0% | |
| TATCCCGCTATCCTAACTTC+AGG | + | chr8_2:48152363-48152382 | Msa1251700:intron | 45.0% | |
| ATCCCGCTATCCTAACTTCA+GGG | + | chr8_2:48152364-48152383 | Msa1251700:intron | 45.0% | |
| ! | GATGGAGTTTTTCTGCTTCC+TGG | + | chr8_2:48152637-48152656 | Msa1251700:CDS | 45.0% |
| TTGAATGGATCACAGCATCC+AGG | - | chr8_2:48152658-48152677 | None:intergenic | 45.0% | |
| TCCCTATAGTTTCCGGAAGT+TGG | + | chr8_2:48152719-48152738 | Msa1251700:CDS | 45.0% | |
| GCATGAAGGGTTAATCAAGC+CGG | + | chr8_2:48152801-48152820 | Msa1251700:CDS | 45.0% | |
| CTGCCTAAAACCAAGCACAA+TGG | - | chr8_2:48152871-48152890 | None:intergenic | 45.0% | |
| !!! | TGCTTGGTTTTAGGCAGTGA+AGG | + | chr8_2:48152874-48152893 | Msa1251700:CDS | 45.0% |
| !! | GTTTTAGGCAGTGAAGGAAG+TGG | + | chr8_2:48152880-48152899 | Msa1251700:CDS | 45.0% |
| ! | CTTGTGAGCATTGCAATGAC+AGG | + | chr8_2:48152934-48152953 | Msa1251700:CDS | 45.0% |
| CTCAATGTTTCAGTTGCAGG+TGG | + | chr8_2:48152970-48152989 | Msa1251700:CDS | 45.0% | |
| !!! | ATGTATTAAATTTTTTATAT+AGG | - | chr8_2:48151937-48151956 | None:intergenic | 5.0% |
| CATCGTGTTCTGTGGGTTTG+AGG | - | chr8_2:48148646-48148665 | None:intergenic | 50.0% | |
| GTGTGTGTTTGGTTATGGGG+TGG | + | chr8_2:48149033-48149052 | Msa1251700:intron | 50.0% | |
| AGTGGTTTCCATCTGCGCAT+CGG | + | chr8_2:48150515-48150534 | Msa1251700:CDS | 50.0% | |
| ! | GAGGCGCTCCATTCCTTATT+TGG | + | chr8_2:48150640-48150659 | Msa1251700:intron | 50.0% |
| AGCAATGTACCGAGGTTACC+TGG | - | chr8_2:48151448-48151467 | None:intergenic | 50.0% | |
| CTGATCTGAGCAATGTACCG+AGG | - | chr8_2:48151456-48151475 | None:intergenic | 50.0% | |
| GATCAGCTGTGGCCTTCAAA+TGG | + | chr8_2:48151470-48151489 | Msa1251700:CDS | 50.0% | |
| GTGAGCTTAGCTCAGTTGGT+AGG | + | chr8_2:48151590-48151609 | Msa1251700:intron | 50.0% | |
| GCATACTGCACCATCTCCAT+GGG | - | chr8_2:48152060-48152079 | None:intergenic | 50.0% | |
| AGCATACTGCACCATCTCCA+TGG | - | chr8_2:48152061-48152080 | None:intergenic | 50.0% | |
| TGGAGATGGTGCAGTATGCT+AGG | + | chr8_2:48152061-48152080 | Msa1251700:intron | 50.0% | |
| !! | TAGGATAGCGGGATAGCATG+TGG | - | chr8_2:48152358-48152377 | None:intergenic | 50.0% |
| GACCCTGAAGTTAGGATAGC+GGG | - | chr8_2:48152369-48152388 | None:intergenic | 50.0% | |
| CGACCCTGAAGTTAGGATAG+CGG | - | chr8_2:48152370-48152389 | None:intergenic | 50.0% | |
| CGCTATCCTAACTTCAGGGT+CGG | + | chr8_2:48152368-48152387 | Msa1251700:intron | 50.0% | |
| ! | CGGAGTGCTTTCTCGTTGAA+TGG | - | chr8_2:48152673-48152692 | None:intergenic | 50.0% |
| GCCCAGCAAGCAACTTCATT+TGG | - | chr8_2:48152774-48152793 | None:intergenic | 50.0% | |
| CACAAGCTCACATGCTTGCA+GGG | - | chr8_2:48152920-48152939 | None:intergenic | 50.0% | |
| TCACAAGCTCACATGCTTGC+AGG | - | chr8_2:48152921-48152940 | None:intergenic | 50.0% | |
| GCGCAGATGGAAACCACTTC+TGG | - | chr8_2:48150513-48150532 | None:intergenic | 55.0% | |
| ! | GGAGCGCCTCCTTTCAATTG+AGG | - | chr8_2:48150630-48150649 | None:intergenic | 55.0% |
| CTGCAGGATCCAGGTAACCT+CGG | + | chr8_2:48151436-48151455 | Msa1251700:intron | 55.0% | |
| TAAGCTCACGAGGACGAAGC+TGG | - | chr8_2:48151579-48151598 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | - | chr8_2:48151589-48151608 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | + | chr8_2:48151586-48151605 | Msa1251700:intron | 55.0% | |
| AAGGTCCGGGGTTCAAACTC+CGG | + | chr8_2:48151633-48151652 | Msa1251700:intron | 55.0% | |
| GGTAGTGATGCCCATGGAGA+TGG | + | chr8_2:48152047-48152066 | Msa1251700:intron | 55.0% | |
| ! | ATAGCGGGATAGCATGTGGC+GGG | - | chr8_2:48152354-48152373 | None:intergenic | 55.0% |
| !! | GATAGCGGGATAGCATGTGG+CGG | - | chr8_2:48152355-48152374 | None:intergenic | 55.0% |
| GAGAAGCCGACCCTGAAGTT+AGG | - | chr8_2:48152377-48152396 | None:intergenic | 55.0% | |
| GGAGTTGAAAGGATGCGCCT+CGG | - | chr8_2:48152702-48152721 | None:intergenic | 55.0% | |
| CTGGGCATCCACAGCATGAA+GGG | + | chr8_2:48152788-48152807 | Msa1251700:CDS | 55.0% | |
| ! | AAAGCACTCCGAGCTAGCCG+AGG | + | chr8_2:48152682-48152701 | Msa1251700:CDS | 60.0% |
| GCTGGGCATCCACAGCATGA+AGG | + | chr8_2:48152787-48152806 | Msa1251700:CDS | 60.0% | |
| GGTGGCCGGAGTTTGAACCC+CGG | - | chr8_2:48151641-48151660 | None:intergenic | 65.0% | |
| ! | CGGGATAGCATGTGGCGGGA+TGG | - | chr8_2:48152350-48152369 | None:intergenic | 65.0% |
| ! | AGGATGCGCCTCGGCTAGCT+CGG | - | chr8_2:48152693-48152712 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 48148573 | 48153171 | 48148573 | ID=Msa1251700;Name=Msa1251700 |
| chr8_2 | mRNA | 48148573 | 48153171 | 48148573 | ID=Msa1251700-mRNA-1;Parent=Msa1251700;Name=Msa1251700-mRNA-1;_AED=0.05;_eAED=0.05;_QI=28|1|1|1|1|1|4|142|336 |
| chr8_2 | exon | 48148573 | 48148875 | 48148573 | ID=Msa1251700-mRNA-1:exon:14465;Parent=Msa1251700-mRNA-1 |
| chr8_2 | exon | 48150270 | 48150561 | 48150270 | ID=Msa1251700-mRNA-1:exon:14466;Parent=Msa1251700-mRNA-1 |
| chr8_2 | exon | 48151442 | 48151492 | 48151442 | ID=Msa1251700-mRNA-1:exon:14467;Parent=Msa1251700-mRNA-1 |
| chr8_2 | exon | 48152637 | 48153171 | 48152637 | ID=Msa1251700-mRNA-1:exon:14468;Parent=Msa1251700-mRNA-1 |
| chr8_2 | five_prime_UTR | 48148573 | 48148600 | 48148573 | ID=Msa1251700-mRNA-1:five_prime_utr;Parent=Msa1251700-mRNA-1 |
| chr8_2 | CDS | 48148601 | 48148875 | 48148601 | ID=Msa1251700-mRNA-1:cds;Parent=Msa1251700-mRNA-1 |
| chr8_2 | CDS | 48150270 | 48150561 | 48150270 | ID=Msa1251700-mRNA-1:cds;Parent=Msa1251700-mRNA-1 |
| chr8_2 | CDS | 48151442 | 48151492 | 48151442 | ID=Msa1251700-mRNA-1:cds;Parent=Msa1251700-mRNA-1 |
| chr8_2 | CDS | 48152637 | 48153029 | 48152637 | ID=Msa1251700-mRNA-1:cds;Parent=Msa1251700-mRNA-1 |
| chr8_2 | three_prime_UTR | 48153030 | 48153171 | 48153030 | ID=Msa1251700-mRNA-1:three_prime_utr;Parent=Msa1251700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
