AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0146110


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0146110 MtrunA17_Chr1g0153801 93.793 290 15 2 1 288 1 289 0.0 511
Msa0146110 MtrunA17_Chr2g0305941 49.321 221 107 2 67 287 65 280 1.67e-74 229
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0146110 AT2G26550.2 59.766 256 91 1 45 288 44 299 4.16e-103 303
Msa0146110 AT2G26550.3 56.458 271 91 2 45 288 44 314 5.15e-99 293
Msa0146110 AT2G26550.1 49.518 311 90 3 45 288 44 354 6.17e-90 271
Msa0146110 AT2G26550.4 60.000 210 72 1 61 258 60 269 6.53e-82 248
Msa0146110 AT2G26670.1 50.901 222 104 2 67 287 64 281 8.15e-81 246
Msa0146110 AT1G69720.1 51.584 221 104 2 67 287 67 284 6.09e-78 238
Msa0146110 AT1G69720.3 51.584 221 104 2 67 287 67 284 6.09e-78 238
Msa0146110 AT1G58300.1 42.586 263 133 3 26 287 37 282 2.13e-70 219
Msa0146110 AT2G26670.2 42.601 223 77 2 65 287 62 233 4.51e-60 191
Msa0146110 AT1G69720.2 48.447 161 80 2 67 227 67 224 4.69e-48 160

Find 100 sgRNAs with CRISPR-Local

Find 289 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCAAGTTCCTCTAAATATT+TGG 0.110208 1_4:-5863062 None:intergenic
AAGAAAATGATGACGCTTAT+AGG 0.180424 1_4:+5865723 Msa0146110:three_prime_UTR
AATAAGATTTAGTATAAAAT+TGG 0.184915 1_4:+5861707 None:intergenic
GAGAATGATGATTCTTCTTC+TGG 0.223274 1_4:-5861890 None:intergenic
TTCTGTATTGTAGCTGTTCT+AGG 0.224531 1_4:+5865797 Msa0146110:three_prime_UTR
GAAAGGCTTTCTTCGATTCT+TGG 0.256872 1_4:+5862155 Msa0146110:CDS
CCTCATCTCTTCGGTGATTC+CGG 0.265544 1_4:-5862022 None:intergenic
GTTGTCACGCCTCACATTTA+TGG 0.270091 1_4:+5865321 Msa0146110:three_prime_UTR
ATTTAGTATAAAATTGGATT+TGG 0.297233 1_4:+5861713 Msa0146110:five_prime_UTR
CAAACTACAGAGAACTTAAA+TGG 0.299562 1_4:-5865611 None:intergenic
CTGAGGTGCTAATTGTAAAA+TGG 0.313698 1_4:-5865761 None:intergenic
CGAAGAAAGCCTTTCATAGA+AGG 0.348541 1_4:-5862147 None:intergenic
TAACCTGGCCCTGGCAGCTT+TGG 0.349399 1_4:-5865360 None:intergenic
GGGCCAGGTTACATCTGTTA+TGG 0.369645 1_4:+5865372 Msa0146110:three_prime_UTR
ACTCCAGCTCCTTACCTTCC+AGG 0.374412 1_4:-5864579 None:intergenic
GAACAATCTGTCCCATAAAC+TGG 0.386716 1_4:-5864822 None:intergenic
GTCTAGAGATGTGGCTTAGC+TGG 0.391311 1_4:+5865464 Msa0146110:three_prime_UTR
ATAGTGCAAGTAGGAAATAA+TGG 0.392038 1_4:-5865567 None:intergenic
GATGCATACTTGAGGAAAAC+TGG 0.393679 1_4:+5862944 Msa0146110:intron
GTGATTCCGGTGGTTTCACC+AGG 0.410208 1_4:-5862009 None:intergenic
TTTGTCGCTGTGGAGTTTCA+TGG 0.410902 1_4:-5862052 None:intergenic
TACATATGCCAAATATTTAG+AGG 0.415258 1_4:+5863054 Msa0146110:CDS
ATAGAAGGATACCACGTGTC+AGG 0.419281 1_4:-5862132 None:intergenic
GAAACCGTTATATTCTACTT+TGG 0.421202 1_4:-5865850 None:intergenic
AAAATGGATATTGTAGAAAT+GGG 0.422336 1_4:-5863110 None:intergenic
TTCTTCTTCTTATCCACCGT+TGG 0.435389 1_4:+5861954 Msa0146110:CDS
CGAACGCATTGTTGATGATT+CGG 0.450060 1_4:+5862206 Msa0146110:CDS
ATTTGCCTTACTTATTGCTA+TGG 0.459682 1_4:+5865395 Msa0146110:three_prime_UTR
TGAAGATTTCTTTCTTATTG+TGG 0.459734 1_4:+5865544 Msa0146110:three_prime_UTR
TTTCCAAAGCTGCCAGGGCC+AGG 0.463813 1_4:+5865357 Msa0146110:three_prime_UTR
TTCTCATATAACTGCTGGCC+AGG 0.466119 1_4:+5863132 Msa0146110:CDS
TAGTATAAAATTGGATTTGG+AGG 0.468249 1_4:+5861716 Msa0146110:five_prime_UTR
TTAGGTATCTGAAAAGCTCC+TGG 0.483336 1_4:+5864561 Msa0146110:intron
ATTTGTGCAGCATTGGGGTC+GGG 0.486709 1_4:+5864759 Msa0146110:intron
AAAATCCATAGCAATAAGTA+AGG 0.492889 1_4:-5865400 None:intergenic
GGTGTTGAAGCGTGTTCGAT+TGG 0.492898 1_4:-5861869 None:intergenic
GAAGGATCTAGAATGGTTGA+AGG 0.493575 1_4:+5862991 Msa0146110:CDS
TATGTAGTACCAGGTGAACT+TGG 0.493729 1_4:-5863037 None:intergenic
AGTACCAGGTGAACTTGGAT+TGG 0.500411 1_4:-5863032 None:intergenic
AGTGTTGATGATGGTGGGAA+TGG 0.502339 1_4:-5861844 None:intergenic
AGGAGCTGGAGTTCTGCAAA+TGG 0.505314 1_4:+5864590 Msa0146110:CDS
AATTTGTGCAGCATTGGGGT+CGG 0.511624 1_4:+5864758 Msa0146110:intron
CCATGGTTGTTGCAGTTGAG+TGG 0.513441 1_4:-5861818 None:intergenic
ATAAGAAGAAGAAGATGAAG+AGG 0.514379 1_4:-5861944 None:intergenic
AATTACATGTGAAGTTTCTG+TGG 0.514825 1_4:-5865672 None:intergenic
TGAAAAGCTCCTGGAAGGTA+AGG 0.515112 1_4:+5864570 Msa0146110:CDS
CGTCTGATCATCTTATAAAG+AGG 0.518449 1_4:+5864844 Msa0146110:exon
GTACCAGGTGAACTTGGATT+GGG 0.518612 1_4:-5863031 None:intergenic
GGCAACGAACCTCATCTCTT+CGG 0.520653 1_4:-5862031 None:intergenic
AACGAAATTGTCACTCCACC+TGG 0.522060 1_4:-5865433 None:intergenic
CAAATGGGAAGGAGATGTAC+AGG 0.523655 1_4:+5864606 Msa0146110:CDS
AGTGGTATTGTTGACGGTGT+TGG 0.527238 1_4:-5862076 None:intergenic
GTGTTGAAGCGTGTTCGATT+GGG 0.527957 1_4:-5861868 None:intergenic
AACAGAAGTGGTATTGTTGA+CGG 0.534137 1_4:-5862082 None:intergenic
CATCTCTTCGGTGATTCCGG+TGG 0.534391 1_4:-5862019 None:intergenic
TCAGTAATACTGCAATATCA+TGG 0.537215 1_4:-5865524 None:intergenic
ATACTTGAGGAAAACTGGAT+TGG 0.541626 1_4:+5862949 Msa0146110:CDS
GGAGCTGGAGTTCTGCAAAT+GGG 0.549742 1_4:+5864591 Msa0146110:CDS
TTCATTAGAGTCTAGAGATG+TGG 0.552909 1_4:+5865455 Msa0146110:three_prime_UTR
TGGGAGCGTTAACTGTAGCT+TGG 0.555696 1_4:+5865268 Msa0146110:three_prime_UTR
CATGGTTGTTGCAGTTGAGT+GGG 0.555894 1_4:-5861817 None:intergenic
CTAGAATGGTTGAAGGAACA+AGG 0.560120 1_4:+5862998 Msa0146110:CDS
TAACAGATGTAACCTGGCCC+TGG 0.562262 1_4:-5865369 None:intergenic
ACTGGATTGGAAAGATCTGA+AGG 0.563903 1_4:+5862962 Msa0146110:CDS
GCTCCTGGAAGGTAAGGAGC+TGG 0.564683 1_4:+5864576 Msa0146110:CDS
GTCTTCTACTACAACAGAAG+TGG 0.573939 1_4:-5862094 None:intergenic
TTGGGAAGTGTTGATGATGG+TGG 0.574296 1_4:-5861850 None:intergenic
CTTTACCCTGGTGAAACCAC+CGG 0.583875 1_4:+5862003 Msa0146110:CDS
TGATCATCTTATAAAGAGGC+CGG 0.584709 1_4:+5864848 Msa0146110:exon
TGGCCAGGTTATTACAAAGC+AGG 0.585011 1_4:+5863147 Msa0146110:CDS
ACGTGGTATCCTTCTATGAA+AGG 0.586528 1_4:+5862138 Msa0146110:CDS
CGATTGGGAAGTGTTGATGA+TGG 0.589944 1_4:-5861853 None:intergenic
GTACCTGCTTTGTAATAACC+TGG 0.590707 1_4:-5863150 None:intergenic
CAAATATTTAGAGGAACTTG+CGG 0.593836 1_4:+5863063 Msa0146110:CDS
GTATCTGAAAAGCTCCTGGA+AGG 0.595672 1_4:+5864565 Msa0146110:CDS
TGGGAAGTGTTGATGATGGT+GGG 0.598542 1_4:-5861849 None:intergenic
TAGAAGGATACCACGTGTCA+GGG 0.599723 1_4:-5862131 None:intergenic
CGCTATCGAAAACTTTACCC+TGG 0.601205 1_4:+5861991 Msa0146110:CDS
TATTTGGCATATGTAGTACC+AGG 0.604625 1_4:-5863046 None:intergenic
ATTCCCAATCCAAGTTCACC+TGG 0.607725 1_4:+5863028 Msa0146110:CDS
CTGGAGTTCTGCAAATGGGA+AGG 0.610060 1_4:+5864595 Msa0146110:CDS
TAGAAATGGGAAAGAAACAA+AGG 0.614055 1_4:-5863097 None:intergenic
AATCCATAACAGATGTAACC+TGG 0.614119 1_4:-5865375 None:intergenic
ATTGAATTGCCATAAATGTG+AGG 0.616747 1_4:-5865330 None:intergenic
GAATTGCAGATGCATACTTG+AGG 0.618600 1_4:+5862936 Msa0146110:intron
GTGTCGCTATGTAGGATAGG+GGG 0.626884 1_4:+5865239 Msa0146110:intron
CCACTCAACTGCAACAACCA+TGG 0.631304 1_4:+5861818 Msa0146110:CDS
TCATCTTATAAAGAGGCCGG+TGG 0.633941 1_4:+5864851 Msa0146110:exon
TTGTAATTTGTGCAGCATTG+GGG 0.639959 1_4:+5864754 Msa0146110:intron
CATCTTATAAAGAGGCCGGT+GGG 0.641764 1_4:+5864852 Msa0146110:exon
CCGGAATCACCGAAGAGATG+AGG 0.642207 1_4:+5862022 Msa0146110:CDS
AGTGTCGCTATGTAGGATAG+GGG 0.644548 1_4:+5865238 Msa0146110:intron
AGCCACAAAATAGTGCAAGT+AGG 0.650331 1_4:-5865576 None:intergenic
GAAGCTTAACGTGCTTGCAG+AGG 0.660843 1_4:+5864651 Msa0146110:CDS
TGTCGCTATGTAGGATAGGG+GGG 0.665338 1_4:+5865240 Msa0146110:intron
TGATTCCGGTGGTTTCACCA+GGG 0.673875 1_4:-5862008 None:intergenic
GTTGTAGTAGAAGACTGTGA+AGG 0.688185 1_4:+5862102 Msa0146110:CDS
AGAAATTACAGTAAAGACTG+AGG 0.689610 1_4:-5865778 None:intergenic
GATGGTGGGAATGGTAACCA+TGG 0.718374 1_4:-5861835 None:intergenic
AAGGACAAATCCCTGACACG+TGG 0.718573 1_4:+5862121 Msa0146110:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTTAAATTTTTTTAT+AGG + chr1_4:5863834-5863853 Msa0146110:intron 0.0%
!!! TTTTTTGAATGATTTTTTTT+TGG - chr1_4:5863385-5863404 None:intergenic 10.0%
!! AATCATTCAAAAAAAAAAAT+TGG + chr1_4:5863391-5863410 Msa0146110:intron 10.0%
!!! TCTTTATTTTTTTTTAATCT+GGG - chr1_4:5863958-5863977 None:intergenic 10.0%
!!! ATCTTTATTTTTTTTTAATC+TGG - chr1_4:5863959-5863978 None:intergenic 10.0%
!! TGTTAAATTAAAAAAAATCA+AGG - chr1_4:5864313-5864332 None:intergenic 10.0%
!! ATTTAGTATAAAATTGGATT+TGG + chr1_4:5861713-5861732 Msa0146110:five_prime_UTR 15.0%
!! TAACAAAATCAAAATCAAAT+TGG - chr1_4:5862591-5862610 None:intergenic 15.0%
!! TAATAGTTGTTTATTCAAAT+AGG + chr1_4:5862845-5862864 Msa0146110:intron 15.0%
!! AATAGTTGTTTATTCAAATA+GGG + chr1_4:5862846-5862865 Msa0146110:intron 15.0%
!!! TATTTGATAGAATTTTTTGT+TGG + chr1_4:5863696-5863715 Msa0146110:intron 15.0%
!!! ATTTGATAGAATTTTTTGTT+GGG + chr1_4:5863697-5863716 Msa0146110:intron 15.0%
!!! TTTAATTTAACACAGATATT+AGG + chr1_4:5864321-5864340 Msa0146110:intron 15.0%
!!! TTATACTTATTATTTTTGTG+TGG + chr1_4:5864731-5864750 Msa0146110:intron 15.0%
!!! ACTTTGAATTCATTAATTTG+AGG + chr1_4:5862303-5862322 Msa0146110:intron 20.0%
!!! AATCAAATTGGTTTCATTTA+AGG - chr1_4:5862579-5862598 None:intergenic 20.0%
!!! TCGCAAAATAACAAATTTTA+TGG + chr1_4:5862713-5862732 Msa0146110:intron 20.0%
!!! TTGATTTGATTTAGTTATGA+TGG + chr1_4:5862893-5862912 Msa0146110:intron 20.0%
!! AAAATGGATATTGTAGAAAT+GGG - chr1_4:5863113-5863132 None:intergenic 20.0%
!! AAAAATGGATATTGTAGAAA+TGG - chr1_4:5863114-5863133 None:intergenic 20.0%
!! AGCTAATTTAAACTTATATG+AGG + chr1_4:5863422-5863441 Msa0146110:intron 20.0%
!! GATTTATTGTTTAACAATCA+AGG + chr1_4:5863444-5863463 Msa0146110:intron 20.0%
!!! TTTTTTTTTAATCCTGATGA+TGG + chr1_4:5863555-5863574 Msa0146110:intron 20.0%
!!! TTTTTTTTAATCCTGATGAT+GGG + chr1_4:5863556-5863575 Msa0146110:intron 20.0%
!! ATAATGATAAAACACAAACA+CGG - chr1_4:5863807-5863826 None:intergenic 20.0%
!!! TTTTTTATAGGTAAGTGAAA+CGG + chr1_4:5863846-5863865 Msa0146110:intron 20.0%
!!! ATTTTTTTTTAATCTGGGAA+TGG - chr1_4:5863953-5863972 None:intergenic 20.0%
!! TAAAAAGTTAGTGATAAGAT+AGG + chr1_4:5864026-5864045 Msa0146110:intron 20.0%
!! AAAAAGTTAGTGATAAGATA+GGG + chr1_4:5864027-5864046 Msa0146110:intron 20.0%
!! TCTTTAATAAAGAATTCCTT+AGG - chr1_4:5864475-5864494 None:intergenic 20.0%
!!! TTTTTCCATTTAAGCATTTT+GGG - chr1_4:5865070-5865089 None:intergenic 20.0%
!!! ATTTTTCCATTTAAGCATTT+TGG - chr1_4:5865071-5865090 None:intergenic 20.0%
!!! ACATTTGATTGCATTATTTT+TGG + chr1_4:5865149-5865168 Msa0146110:intron 20.0%
!! CATGTAATTTATAAAAATGC+CGG + chr1_4:5865686-5865705 Msa0146110:three_prime_UTR 20.0%
! TAGTATAAAATTGGATTTGG+AGG + chr1_4:5861716-5861735 Msa0146110:five_prime_UTR 25.0%
! TAAGTGTTTGTTTGGTTATA+TGG + chr1_4:5862268-5862287 Msa0146110:intron 25.0%
!!! GTTTGTAGCTTATTTCTATA+AGG + chr1_4:5862523-5862542 Msa0146110:intron 25.0%
! TTGTGTAACAAAACACTTAT+AGG + chr1_4:5862648-5862667 Msa0146110:intron 25.0%
! ACAAAACACTTATAGGATAT+AGG + chr1_4:5862655-5862674 Msa0146110:intron 25.0%
!!! ATGCTCATTGTTTTAAATTG+TGG + chr1_4:5862688-5862707 Msa0146110:intron 25.0%
! TTTCAATTATGGTTGTAGTT+AGG - chr1_4:5862801-5862820 None:intergenic 25.0%
!! TAAGCAATGGTTTTCAATTA+TGG - chr1_4:5862812-5862831 None:intergenic 25.0%
! TACATATGCCAAATATTTAG+AGG + chr1_4:5863054-5863073 Msa0146110:CDS 25.0%
! AAAGTTTCTTATAAGCATAC+AGG + chr1_4:5863247-5863266 Msa0146110:intron 25.0%
! AAGTTTCTTATAAGCATACA+GGG + chr1_4:5863248-5863267 Msa0146110:intron 25.0%
!!! TTTTTTTTTGGCTTTCAAAC+CGG - chr1_4:5863373-5863392 None:intergenic 25.0%
!!! ATTTTTTGTTGGGAAATATG+AGG + chr1_4:5863707-5863726 Msa0146110:intron 25.0%
! AAATGAATGAAGGAAATATG+TGG + chr1_4:5863770-5863789 Msa0146110:intron 25.0%
! GATATAAAGTATAAGGTAAG+GGG - chr1_4:5863886-5863905 None:intergenic 25.0%
! GGATATAAAGTATAAGGTAA+GGG - chr1_4:5863887-5863906 None:intergenic 25.0%
! AGGATATAAAGTATAAGGTA+AGG - chr1_4:5863888-5863907 None:intergenic 25.0%
! TACCTTATACTTTATATCCT+TGG + chr1_4:5863888-5863907 Msa0146110:intron 25.0%
! ACCTTATACTTTATATCCTT+GGG + chr1_4:5863889-5863908 Msa0146110:intron 25.0%
!!! AAGAGTTGAAGTTTTAAGTT+TGG + chr1_4:5864134-5864153 Msa0146110:intron 25.0%
! GAATAATAACTCTTGAATGT+TGG + chr1_4:5864214-5864233 Msa0146110:intron 25.0%
! ACATTGTCTTTCCAATATTT+AGG + chr1_4:5864416-5864435 Msa0146110:intron 25.0%
! CATTGTCTTTCCAATATTTA+GGG + chr1_4:5864417-5864436 Msa0146110:intron 25.0%
! ATTGTCTTTCCAATATTTAG+GGG + chr1_4:5864418-5864437 Msa0146110:intron 25.0%
! ATGCTTAAAGAAATTCTTGA+TGG - chr1_4:5864523-5864542 None:intergenic 25.0%
! TACTAGGAATTCTTTAATTG+TGG + chr1_4:5864679-5864698 Msa0146110:intron 25.0%
! AAAAAAGTCATTCCAGTTTA+TGG + chr1_4:5864810-5864829 Msa0146110:CDS 25.0%
! AAAAAGTCATTCCAGTTTAT+GGG + chr1_4:5864811-5864830 Msa0146110:CDS 25.0%
!!! TAATAGCAGTGACTTTTTTA+TGG + chr1_4:5864891-5864910 Msa0146110:three_prime_UTR 25.0%
!!! CTTCCTTTAACTTTTGAAAT+CGG + chr1_4:5864936-5864955 Msa0146110:intron 25.0%
!!! ATTTTAATTGATAGAGGATC+AGG + chr1_4:5864961-5864980 Msa0146110:intron 25.0%
! ATGTAAGAAACTTGACAATA+GGG - chr1_4:5865133-5865152 None:intergenic 25.0%
! AATGTAAGAAACTTGACAAT+AGG - chr1_4:5865134-5865153 None:intergenic 25.0%
!! ATATTTGCTGCAACAAAAAA+TGG - chr1_4:5865297-5865316 None:intergenic 25.0%
! AAAATCCATAGCAATAAGTA+AGG - chr1_4:5865403-5865422 None:intergenic 25.0%
!! CTTATTGCTATGGATTTTAT+CGG + chr1_4:5865405-5865424 Msa0146110:three_prime_UTR 25.0%
! TGAAGATTTCTTTCTTATTG+TGG + chr1_4:5865544-5865563 Msa0146110:three_prime_UTR 25.0%
!!! TAATTTTTGAGACATTTGGT+TGG + chr1_4:5865646-5865665 Msa0146110:three_prime_UTR 25.0%
ATAAGAAGAAGAAGATGAAG+AGG - chr1_4:5861947-5861966 None:intergenic 30.0%
GCAGTTATTAAGTGTTTGTT+TGG + chr1_4:5862260-5862279 Msa0146110:intron 30.0%
!! GCTTATTTCTATAAGGTATC+AGG + chr1_4:5862530-5862549 Msa0146110:intron 30.0%
ACACAATCATATAAGTGCTT+AGG - chr1_4:5862634-5862653 None:intergenic 30.0%
! AAATTTTATGGTCTCTGCAA+TGG + chr1_4:5862725-5862744 Msa0146110:intron 30.0%
! AAGATCTGAAGGAATTTTGA+AGG + chr1_4:5862973-5862992 Msa0146110:CDS 30.0%
!! GAATTTTGAAGGATCTAGAA+TGG + chr1_4:5862984-5863003 Msa0146110:CDS 30.0%
CAAATATTTAGAGGAACTTG+CGG + chr1_4:5863063-5863082 Msa0146110:CDS 30.0%
TAGAAATGGGAAAGAAACAA+AGG - chr1_4:5863100-5863119 None:intergenic 30.0%
CAGCAGTTATATGAGAAAAA+TGG - chr1_4:5863129-5863148 None:intergenic 30.0%
! CATTTTTCTCATATAACTGC+TGG + chr1_4:5863127-5863146 Msa0146110:CDS 30.0%
! ACTTTTCCCATCTCTTAAAA+GGG + chr1_4:5863176-5863195 Msa0146110:intron 30.0%
AGGGAATCCAATCTATTTAT+AGG + chr1_4:5863195-5863214 Msa0146110:intron 30.0%
GGGAATCCAATCTATTTATA+GGG + chr1_4:5863196-5863215 Msa0146110:intron 30.0%
AAAGCTCCCTATAAATAGAT+TGG - chr1_4:5863205-5863224 None:intergenic 30.0%
! CTATTTATAGGGAGCTTTTA+TGG + chr1_4:5863207-5863226 Msa0146110:intron 30.0%
AGTTTCTTATAAGCATACAG+GGG + chr1_4:5863249-5863268 Msa0146110:intron 30.0%
ATTGTTTAACAATCAAGGTG+TGG + chr1_4:5863449-5863468 Msa0146110:intron 30.0%
ACTCTAGACATATGGTTAAA+GGG - chr1_4:5863496-5863515 None:intergenic 30.0%
AACTCTAGACATATGGTTAA+AGG - chr1_4:5863497-5863516 None:intergenic 30.0%
TTTCTTGTGGGTATTTGATT+TGG - chr1_4:5863634-5863653 None:intergenic 30.0%
! AGATGTGCAATTTTTCTTGT+GGG - chr1_4:5863646-5863665 None:intergenic 30.0%
! TAGATGTGCAATTTTTCTTG+TGG - chr1_4:5863647-5863666 None:intergenic 30.0%
CCTTATACTTTATATCCTTG+GGG + chr1_4:5863890-5863909 Msa0146110:intron 30.0%
! CTTTTTCTCAATCTCACTTA+TGG - chr1_4:5864055-5864074 None:intergenic 30.0%
! AATCACGAAGAATTTTGTGT+GGG + chr1_4:5864260-5864279 Msa0146110:intron 30.0%
!! TCACCGATTTCAAAAGTTAA+AGG - chr1_4:5864942-5864961 None:intergenic 30.0%
!!! TCGGTGATTTTAATTGATAG+AGG + chr1_4:5864955-5864974 Msa0146110:intron 30.0%
!! TATGTATGTCACTTTACGAT+TGG - chr1_4:5865033-5865052 None:intergenic 30.0%
!!! TGATTGCATTATTTTTGGTC+TGG + chr1_4:5865154-5865173 Msa0146110:intron 30.0%
TGCAACTATAAATTGTGTAG+TGG + chr1_4:5865185-5865204 Msa0146110:intron 30.0%
ATTGAATTGCCATAAATGTG+AGG - chr1_4:5865333-5865352 None:intergenic 30.0%
ATTTGCCTTACTTATTGCTA+TGG + chr1_4:5865395-5865414 Msa0146110:three_prime_UTR 30.0%
TCAGTAATACTGCAATATCA+TGG - chr1_4:5865527-5865546 None:intergenic 30.0%
ATAGTGCAAGTAGGAAATAA+TGG - chr1_4:5865570-5865589 None:intergenic 30.0%
CAAACTACAGAGAACTTAAA+TGG - chr1_4:5865614-5865633 None:intergenic 30.0%
!!! CGAGTAATTTTTGAGACATT+TGG + chr1_4:5865642-5865661 Msa0146110:three_prime_UTR 30.0%
AATTACATGTGAAGTTTCTG+TGG - chr1_4:5865675-5865694 None:intergenic 30.0%
! AAGAAAATGATGACGCTTAT+AGG + chr1_4:5865723-5865742 Msa0146110:three_prime_UTR 30.0%
AGAAATTACAGTAAAGACTG+AGG - chr1_4:5865781-5865800 None:intergenic 30.0%
GAGAATGATGATTCTTCTTC+TGG - chr1_4:5861893-5861912 None:intergenic 35.0%
! TTTCTTTTTCTAACCAACGG+TGG - chr1_4:5861970-5861989 None:intergenic 35.0%
! CGGTTTCTTTTTCTAACCAA+CGG - chr1_4:5861973-5861992 None:intergenic 35.0%
AACAGAAGTGGTATTGTTGA+CGG - chr1_4:5862085-5862104 None:intergenic 35.0%
AGGTTAAAAATAGCGTTTCG+AGG + chr1_4:5862323-5862342 Msa0146110:intron 35.0%
AGAGCTTGTAGAATAAGCAA+TGG - chr1_4:5862825-5862844 None:intergenic 35.0%
ATACTTGAGGAAAACTGGAT+TGG + chr1_4:5862949-5862968 Msa0146110:CDS 35.0%
TATTTGGCATATGTAGTACC+AGG - chr1_4:5863049-5863068 None:intergenic 35.0%
CGCAAGTTCCTCTAAATATT+TGG - chr1_4:5863065-5863084 None:intergenic 35.0%
TTTAAGAGATGGGAAAAGTG+AGG - chr1_4:5863175-5863194 None:intergenic 35.0%
! CACTTTTCCCATCTCTTAAA+AGG + chr1_4:5863175-5863194 Msa0146110:intron 35.0%
!! TGGATTCCCTTTTAAGAGAT+GGG - chr1_4:5863185-5863204 None:intergenic 35.0%
!! TTGGATTCCCTTTTAAGAGA+TGG - chr1_4:5863186-5863205 None:intergenic 35.0%
GTTTCTTATAAGCATACAGG+GGG + chr1_4:5863250-5863269 Msa0146110:intron 35.0%
! ATATGTCTAGAGTTCGAATC+CGG + chr1_4:5863503-5863522 Msa0146110:intron 35.0%
!! TTTAATCCTGATGATGGGAA+TGG + chr1_4:5863561-5863580 Msa0146110:intron 35.0%
GAAATATGAGGAACAAGAGA+AGG + chr1_4:5863719-5863738 Msa0146110:intron 35.0%
GAACAAGAGTGAAGTAGAAT+GGG + chr1_4:5863741-5863760 Msa0146110:intron 35.0%
CCCCAAGGATATAAAGTATA+AGG - chr1_4:5863893-5863912 None:intergenic 35.0%
AGTCTTGAGGTTTAACTGTT+TGG + chr1_4:5863916-5863935 Msa0146110:intron 35.0%
! GTAAGCTAAATCTTGAGTTG+TGG - chr1_4:5864110-5864129 None:intergenic 35.0%
CTTAAAACTTCAACTCTTCG+AGG - chr1_4:5864132-5864151 None:intergenic 35.0%
TCTTGAATGTTGGATCAGTA+AGG + chr1_4:5864224-5864243 Msa0146110:intron 35.0%
CTTGAATGTTGGATCAGTAA+GGG + chr1_4:5864225-5864244 Msa0146110:intron 35.0%
! CAATCACGAAGAATTTTGTG+TGG + chr1_4:5864259-5864278 Msa0146110:intron 35.0%
AGATATTAGGAGAATGAGCA+AGG + chr1_4:5864334-5864353 Msa0146110:intron 35.0%
AGAATGAGCAAGGTAATTGT+AGG + chr1_4:5864344-5864363 Msa0146110:intron 35.0%
TCTTTCCAATATTTAGGGGT+GGG + chr1_4:5864422-5864441 Msa0146110:intron 35.0%
!!! GTCATTCTGTTGTTGCTTTT+AGG + chr1_4:5864543-5864562 Msa0146110:intron 35.0%
! GTTGTAATTTGTGCAGCATT+GGG + chr1_4:5864753-5864772 Msa0146110:intron 35.0%
! TTGTAATTTGTGCAGCATTG+GGG + chr1_4:5864754-5864773 Msa0146110:intron 35.0%
CGTCTGATCATCTTATAAAG+AGG + chr1_4:5864844-5864863 Msa0146110:exon 35.0%
TGATCATCTTATAAAGAGGC+CGG + chr1_4:5864848-5864867 Msa0146110:exon 35.0%
TAATTGATAGAGGATCAGGA+AGG + chr1_4:5864965-5864984 Msa0146110:intron 35.0%
AATTGATAGAGGATCAGGAA+GGG + chr1_4:5864966-5864985 Msa0146110:intron 35.0%
!! TCCATTTAAGCATTTTGGGA+GGG - chr1_4:5865066-5865085 None:intergenic 35.0%
! TTCCATTTAAGCATTTTGGG+AGG - chr1_4:5865067-5865086 None:intergenic 35.0%
! ATAATTTTTCCAAAGCTGCC+AGG + chr1_4:5865351-5865370 Msa0146110:three_prime_UTR 35.0%
! TAATTTTTCCAAAGCTGCCA+GGG + chr1_4:5865352-5865371 Msa0146110:three_prime_UTR 35.0%
AATCCATAACAGATGTAACC+TGG - chr1_4:5865378-5865397 None:intergenic 35.0%
TTCATTAGAGTCTAGAGATG+TGG + chr1_4:5865455-5865474 Msa0146110:three_prime_UTR 35.0%
! TTCCTACTTGCACTATTTTG+TGG + chr1_4:5865574-5865593 Msa0146110:three_prime_UTR 35.0%
!! TTCTTTTTGACTGAAAGCAC+CGG - chr1_4:5865708-5865727 None:intergenic 35.0%
! CTGAGGTGCTAATTGTAAAA+TGG - chr1_4:5865764-5865783 None:intergenic 35.0%
TTCTGTATTGTAGCTGTTCT+AGG + chr1_4:5865797-5865816 Msa0146110:three_prime_UTR 35.0%
TTCTTCTTCTTATCCACCGT+TGG + chr1_4:5861954-5861973 Msa0146110:CDS 40.0%
! CAGGGTAAAGTTTTCGATAG+CGG - chr1_4:5861993-5862012 None:intergenic 40.0%
GTCTTCTACTACAACAGAAG+TGG - chr1_4:5862097-5862116 None:intergenic 40.0%
GTTGTAGTAGAAGACTGTGA+AGG + chr1_4:5862102-5862121 Msa0146110:CDS 40.0%
ACGTGGTATCCTTCTATGAA+AGG + chr1_4:5862138-5862157 Msa0146110:CDS 40.0%
CGAAGAAAGCCTTTCATAGA+AGG - chr1_4:5862150-5862169 None:intergenic 40.0%
GAAAGGCTTTCTTCGATTCT+TGG + chr1_4:5862155-5862174 Msa0146110:CDS 40.0%
!! CGAACGCATTGTTGATGATT+CGG + chr1_4:5862206-5862225 Msa0146110:CDS 40.0%
!! AAGCACTTCTGAGACTGTTT+GGG + chr1_4:5862468-5862487 Msa0146110:intron 40.0%
GAATTGCAGATGCATACTTG+AGG + chr1_4:5862936-5862955 Msa0146110:intron 40.0%
GATGCATACTTGAGGAAAAC+TGG + chr1_4:5862944-5862963 Msa0146110:intron 40.0%
! ACTGGATTGGAAAGATCTGA+AGG + chr1_4:5862962-5862981 Msa0146110:CDS 40.0%
! GAAGGATCTAGAATGGTTGA+AGG + chr1_4:5862991-5863010 Msa0146110:CDS 40.0%
CTAGAATGGTTGAAGGAACA+AGG + chr1_4:5862998-5863017 Msa0146110:CDS 40.0%
TATGTAGTACCAGGTGAACT+TGG - chr1_4:5863040-5863059 None:intergenic 40.0%
GTACCTGCTTTGTAATAACC+TGG - chr1_4:5863153-5863172 None:intergenic 40.0%
GGATTCGAACTCTAGACATA+TGG - chr1_4:5863504-5863523 None:intergenic 40.0%
GGAACAAGAGTGAAGTAGAA+TGG + chr1_4:5863740-5863759 Msa0146110:intron 40.0%
AAGAGTGAAGTAGAATGGGA+AGG + chr1_4:5863745-5863764 Msa0146110:intron 40.0%
AGAGTGAAGTAGAATGGGAA+GGG + chr1_4:5863746-5863765 Msa0146110:intron 40.0%
TGGGAAGGGAAAATGAATGA+AGG + chr1_4:5863760-5863779 Msa0146110:intron 40.0%
! TTAATCTGGGAATGGACTCA+TGG - chr1_4:5863945-5863964 None:intergenic 40.0%
GTCTTTCCAATATTTAGGGG+TGG + chr1_4:5864421-5864440 Msa0146110:intron 40.0%
GATTTCCCACCCCTAAATAT+TGG - chr1_4:5864430-5864449 None:intergenic 40.0%
TCTGATTCAGAGTTCACTAC+AGG - chr1_4:5864452-5864471 None:intergenic 40.0%
TGAACTCTGAATCAGACCTA+AGG + chr1_4:5864456-5864475 Msa0146110:intron 40.0%
TTAGGTATCTGAAAAGCTCC+TGG + chr1_4:5864561-5864580 Msa0146110:intron 40.0%
! GGTTGTAATTTGTGCAGCAT+TGG + chr1_4:5864752-5864771 Msa0146110:intron 40.0%
GAACAATCTGTCCCATAAAC+TGG - chr1_4:5864825-5864844 None:intergenic 40.0%
!! ATTTAAGCATTTTGGGAGGG+GGG - chr1_4:5865063-5865082 None:intergenic 40.0%
!! CATTTAAGCATTTTGGGAGG+GGG - chr1_4:5865064-5865083 None:intergenic 40.0%
!! CCATTTAAGCATTTTGGGAG+GGG - chr1_4:5865065-5865084 None:intergenic 40.0%
!!! GCGACACTCGAACATTTTTT+AGG - chr1_4:5865226-5865245 None:intergenic 40.0%
! TGGATTTTATCGGTATAGCC+AGG + chr1_4:5865415-5865434 Msa0146110:three_prime_UTR 40.0%
! ATTTTATCGGTATAGCCAGG+TGG + chr1_4:5865418-5865437 Msa0146110:three_prime_UTR 40.0%
AGCCACAAAATAGTGCAAGT+AGG - chr1_4:5865579-5865598 None:intergenic 40.0%
CATGGTTGTTGCAGTTGAGT+GGG - chr1_4:5861820-5861839 None:intergenic 45.0%
!! AGTGTTGATGATGGTGGGAA+TGG - chr1_4:5861847-5861866 None:intergenic 45.0%
!! TGGGAAGTGTTGATGATGGT+GGG - chr1_4:5861852-5861871 None:intergenic 45.0%
!! TTGGGAAGTGTTGATGATGG+TGG - chr1_4:5861853-5861872 None:intergenic 45.0%
!! CGATTGGGAAGTGTTGATGA+TGG - chr1_4:5861856-5861875 None:intergenic 45.0%
GTGTTGAAGCGTGTTCGATT+GGG - chr1_4:5861871-5861890 None:intergenic 45.0%
CGCTATCGAAAACTTTACCC+TGG + chr1_4:5861991-5862010 Msa0146110:CDS 45.0%
TTTGTCGCTGTGGAGTTTCA+TGG - chr1_4:5862055-5862074 None:intergenic 45.0%
AGTGGTATTGTTGACGGTGT+TGG - chr1_4:5862079-5862098 None:intergenic 45.0%
TAGAAGGATACCACGTGTCA+GGG - chr1_4:5862134-5862153 None:intergenic 45.0%
ATAGAAGGATACCACGTGTC+AGG - chr1_4:5862135-5862154 None:intergenic 45.0%
!! CAAGCACTTCTGAGACTGTT+TGG + chr1_4:5862467-5862486 Msa0146110:intron 45.0%
GGCTGATGAGGTTGAAATTG+CGG - chr1_4:5862759-5862778 None:intergenic 45.0%
ATTCCCAATCCAAGTTCACC+TGG + chr1_4:5863028-5863047 Msa0146110:CDS 45.0%
GTACCAGGTGAACTTGGATT+GGG - chr1_4:5863034-5863053 None:intergenic 45.0%
AGTACCAGGTGAACTTGGAT+TGG - chr1_4:5863035-5863054 None:intergenic 45.0%
TTCTCATATAACTGCTGGCC+AGG + chr1_4:5863132-5863151 Msa0146110:CDS 45.0%
TGGCCAGGTTATTACAAAGC+AGG + chr1_4:5863147-5863166 Msa0146110:CDS 45.0%
TAAGCATACAGGGGGAATAC+CGG + chr1_4:5863258-5863277 Msa0146110:intron 45.0%
TTCCCAGGAGGAACAACATT+TGG + chr1_4:5863287-5863306 Msa0146110:intron 45.0%
TAGAGTTCGAATCCGGATGA+TGG + chr1_4:5863510-5863529 Msa0146110:intron 45.0%
AGAGTTCGAATCCGGATGAT+GGG + chr1_4:5863511-5863530 Msa0146110:intron 45.0%
!! ATCCTTGGGGATTAGTCTTG+AGG + chr1_4:5863903-5863922 Msa0146110:intron 45.0%
AACCTCAAGACTAATCCCCA+AGG - chr1_4:5863908-5863927 None:intergenic 45.0%
GTATCTGAAAAGCTCCTGGA+AGG + chr1_4:5864565-5864584 Msa0146110:CDS 45.0%
TGAAAAGCTCCTGGAAGGTA+AGG + chr1_4:5864570-5864589 Msa0146110:CDS 45.0%
CAAATGGGAAGGAGATGTAC+AGG + chr1_4:5864606-5864625 Msa0146110:CDS 45.0%
GCTTGCAGAGGTAGATTACT+AGG + chr1_4:5864663-5864682 Msa0146110:intron 45.0%
! AATTTGTGCAGCATTGGGGT+CGG + chr1_4:5864758-5864777 Msa0146110:intron 45.0%
TCATCTTATAAAGAGGCCGG+TGG + chr1_4:5864851-5864870 Msa0146110:exon 45.0%
CATCTTATAAAGAGGCCGGT+GGG + chr1_4:5864852-5864871 Msa0146110:exon 45.0%
!! TTTAAGCATTTTGGGAGGGG+GGG - chr1_4:5865062-5865081 None:intergenic 45.0%
CCCCTCCCAAAATGCTTAAA+TGG + chr1_4:5865062-5865081 Msa0146110:intron 45.0%
! ATGTTCGAGTGTCGCTATGT+AGG + chr1_4:5865231-5865250 Msa0146110:intron 45.0%
! GAGTGTCGCTATGTAGGATA+GGG + chr1_4:5865237-5865256 Msa0146110:intron 45.0%
! AGTGTCGCTATGTAGGATAG+GGG + chr1_4:5865238-5865257 Msa0146110:intron 45.0%
GTTGTCACGCCTCACATTTA+TGG + chr1_4:5865321-5865340 Msa0146110:three_prime_UTR 45.0%
AACGAAATTGTCACTCCACC+TGG - chr1_4:5865436-5865455 None:intergenic 45.0%
CCATGGTTGTTGCAGTTGAG+TGG - chr1_4:5861821-5861840 None:intergenic 50.0%
CCACTCAACTGCAACAACCA+TGG + chr1_4:5861818-5861837 Msa0146110:CDS 50.0%
!! GATGGTGGGAATGGTAACCA+TGG - chr1_4:5861838-5861857 None:intergenic 50.0%
! GGTGTTGAAGCGTGTTCGAT+TGG - chr1_4:5861872-5861891 None:intergenic 50.0%
CTTTACCCTGGTGAAACCAC+CGG + chr1_4:5862003-5862022 Msa0146110:CDS 50.0%
TGATTCCGGTGGTTTCACCA+GGG - chr1_4:5862011-5862030 None:intergenic 50.0%
CCTCATCTCTTCGGTGATTC+CGG - chr1_4:5862025-5862044 None:intergenic 50.0%
GGCAACGAACCTCATCTCTT+CGG - chr1_4:5862034-5862053 None:intergenic 50.0%
AAGGACAAATCCCTGACACG+TGG + chr1_4:5862121-5862140 Msa0146110:CDS 50.0%
!! AGTCTCAGAAGTGCTTGCGT+CGG - chr1_4:5862464-5862483 None:intergenic 50.0%
CCTTTGTATTGCGGCTGATG+AGG - chr1_4:5862771-5862790 None:intergenic 50.0%
CCTCATCAGCCGCAATACAA+AGG + chr1_4:5862768-5862787 Msa0146110:intron 50.0%
GGCTGTGAGCCTTTGTATTG+CGG - chr1_4:5862780-5862799 None:intergenic 50.0%
AAGCATACAGGGGGAATACC+GGG + chr1_4:5863259-5863278 Msa0146110:intron 50.0%
GGCCAAATGTTGTTCCTCCT+GGG - chr1_4:5863292-5863311 None:intergenic 50.0%
TGGCCAAATGTTGTTCCTCC+TGG - chr1_4:5863293-5863312 None:intergenic 50.0%
ATTAGTCGCCCACCATTGGT+GGG + chr1_4:5863340-5863359 Msa0146110:intron 50.0%
!! TCGAATCCGGATGATGGGAA+TGG + chr1_4:5863516-5863535 Msa0146110:intron 50.0%
GCATCTCCATTCCCATCATC+CGG - chr1_4:5863525-5863544 None:intergenic 50.0%
GCATCTCCATTCCCATCATC+AGG - chr1_4:5863525-5863544 None:intergenic 50.0%
AGGAGCTGGAGTTCTGCAAA+TGG + chr1_4:5864590-5864609 Msa0146110:CDS 50.0%
GGAGCTGGAGTTCTGCAAAT+GGG + chr1_4:5864591-5864610 Msa0146110:CDS 50.0%
CTGGAGTTCTGCAAATGGGA+AGG + chr1_4:5864595-5864614 Msa0146110:CDS 50.0%
GAAGCTTAACGTGCTTGCAG+AGG + chr1_4:5864651-5864670 Msa0146110:CDS 50.0%
! ATTTGTGCAGCATTGGGGTC+GGG + chr1_4:5864759-5864778 Msa0146110:intron 50.0%
CCAAAAAACAGAGAGCCCAC+CGG - chr1_4:5864870-5864889 None:intergenic 50.0%
! CGAGTGTCGCTATGTAGGAT+AGG + chr1_4:5865236-5865255 Msa0146110:intron 50.0%
! GTGTCGCTATGTAGGATAGG+GGG + chr1_4:5865239-5865258 Msa0146110:intron 50.0%
TGTCGCTATGTAGGATAGGG+GGG + chr1_4:5865240-5865259 Msa0146110:intron 50.0%
!! TGGGAGCGTTAACTGTAGCT+TGG + chr1_4:5865268-5865287 Msa0146110:three_prime_UTR 50.0%
TAACAGATGTAACCTGGCCC+TGG - chr1_4:5865372-5865391 None:intergenic 50.0%
GGGCCAGGTTACATCTGTTA+TGG + chr1_4:5865372-5865391 Msa0146110:three_prime_UTR 50.0%
GTCTAGAGATGTGGCTTAGC+TGG + chr1_4:5865464-5865483 Msa0146110:three_prime_UTR 50.0%
GTGATTCCGGTGGTTTCACC+AGG - chr1_4:5862012-5862031 None:intergenic 55.0%
CATCTCTTCGGTGATTCCGG+TGG - chr1_4:5862022-5862041 None:intergenic 55.0%
CCGGAATCACCGAAGAGATG+AGG + chr1_4:5862022-5862041 Msa0146110:CDS 55.0%
!!! CGGTGTTGGTTTTGTCGCTG+TGG - chr1_4:5862065-5862084 None:intergenic 55.0%
GAATACCGGGTTCGATTCCC+AGG + chr1_4:5863272-5863291 Msa0146110:intron 55.0%
TTCCTCCTGGGAATCGAACC+CGG - chr1_4:5863280-5863299 None:intergenic 55.0%
CTAATCCGGCTCATGCGTAG+AGG - chr1_4:5863325-5863344 None:intergenic 55.0%
!! CCAATGGTGGGCGACTAATC+CGG - chr1_4:5863339-5863358 None:intergenic 55.0%
! GATTAGTCGCCCACCATTGG+TGG + chr1_4:5863339-5863358 Msa0146110:intron 55.0%
GTTTCCGACCCACCAATGGT+GGG - chr1_4:5863351-5863370 None:intergenic 55.0%
! ACCATTGGTGGGTCGGAAAC+CGG + chr1_4:5863351-5863370 Msa0146110:intron 55.0%
ACTCCAGCTCCTTACCTTCC+AGG - chr1_4:5864582-5864601 None:intergenic 55.0%
!!! CCGGTGGGCTCTCTGTTTTT+TGG + chr1_4:5864867-5864886 Msa0146110:three_prime_UTR 55.0%
TGTAGGATAGGGGGGCAGTT+TGG + chr1_4:5865248-5865267 Msa0146110:intron 55.0%
GTAGGATAGGGGGGCAGTTT+GGG + chr1_4:5865249-5865268 Msa0146110:intron 55.0%
TACCGGGTTCGATTCCCAGG+AGG + chr1_4:5863275-5863294 Msa0146110:intron 60.0%
! ATGCGTAGAGGCATGCGCAC+TGG - chr1_4:5863313-5863332 None:intergenic 60.0%
GCATGCCTCTACGCATGAGC+CGG + chr1_4:5863317-5863336 Msa0146110:intron 60.0%
!! CCGGATTAGTCGCCCACCAT+TGG + chr1_4:5863336-5863355 Msa0146110:intron 60.0%
GGTTTCCGACCCACCAATGG+TGG - chr1_4:5863352-5863371 None:intergenic 60.0%
! ACCGGTTTCCGACCCACCAA+TGG - chr1_4:5863355-5863374 None:intergenic 60.0%
GCTCCTGGAAGGTAAGGAGC+TGG + chr1_4:5864576-5864595 Msa0146110:CDS 60.0%
TTTCCAAAGCTGCCAGGGCC+AGG + chr1_4:5865357-5865376 Msa0146110:three_prime_UTR 60.0%
TAACCTGGCCCTGGCAGCTT+TGG - chr1_4:5865363-5865382 None:intergenic 60.0%
! GTCGCCCACCATTGGTGGGT+CGG + chr1_4:5863344-5863363 Msa0146110:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 5861709 5865865 5861709 ID=Msa0146110;Name=Msa0146110
chr1_4 mRNA 5861709 5865865 5861709 ID=Msa0146110-mRNA-1;Parent=Msa0146110;Name=Msa0146110-mRNA-1;_AED=0.07;_eAED=0.07;_QI=90|1|1|1|0.75|0.6|5|664|288
chr1_4 exon 5861709 5862240 5861709 ID=Msa0146110-mRNA-1:exon:2467;Parent=Msa0146110-mRNA-1
chr1_4 exon 5862945 5863168 5862945 ID=Msa0146110-mRNA-1:exon:2468;Parent=Msa0146110-mRNA-1
chr1_4 exon 5864565 5864672 5864565 ID=Msa0146110-mRNA-1:exon:2469;Parent=Msa0146110-mRNA-1
chr1_4 exon 5864769 5864912 5864769 ID=Msa0146110-mRNA-1:exon:2470;Parent=Msa0146110-mRNA-1
chr1_4 exon 5865253 5865865 5865253 ID=Msa0146110-mRNA-1:exon:2471;Parent=Msa0146110-mRNA-1
chr1_4 five_prime_UTR 5861709 5861798 5861709 ID=Msa0146110-mRNA-1:five_prime_utr;Parent=Msa0146110-mRNA-1
chr1_4 CDS 5861799 5862240 5861799 ID=Msa0146110-mRNA-1:cds;Parent=Msa0146110-mRNA-1
chr1_4 CDS 5862945 5863168 5862945 ID=Msa0146110-mRNA-1:cds;Parent=Msa0146110-mRNA-1
chr1_4 CDS 5864565 5864672 5864565 ID=Msa0146110-mRNA-1:cds;Parent=Msa0146110-mRNA-1
chr1_4 CDS 5864769 5864861 5864769 ID=Msa0146110-mRNA-1:cds;Parent=Msa0146110-mRNA-1
chr1_4 three_prime_UTR 5864862 5864912 5864862 ID=Msa0146110-mRNA-1:three_prime_utr;Parent=Msa0146110-mRNA-1
chr1_4 three_prime_UTR 5865253 5865865 5865253 ID=Msa0146110-mRNA-1:three_prime_utr;Parent=Msa0146110-mRNA-1
Gene Sequence

>Msa0146110

ATGTTGTTAACAGCGAAACCCACTCAACTGCAACAACCATGGTTACCATTCCCACCATCATCAACACTTCCCAATCGAACACGCTTCAACACCAGAAGAAGAATCATCATTCTCAACAACAGCAACGAAAACAACAATAGTAACTCCTCTTCATCTTCTTCTTCTTATCCACCGTTGGTTAGAAAAAGAAACCGCTATCGAAAACTTTACCCTGGTGAAACCACCGGAATCACCGAAGAGATGAGGTTCGTTGCCATGAAACTCCACAGCGACAAAACCAACACCGTCAACAATACCACTTCTGTTGTAGTAGAAGACTGTGAAGGACAAATCCCTGACACGTGGTATCCTTCTATGAAAGGCTTTCTTCGATTCTTGGTTGATAATCAACTAGTTTTTGCTACACTCGAACGCATTGTTGATGATTCGGATAATGTTTCATATGCATACTTGAGGAAAACTGGATTGGAAAGATCTGAAGGAATTTTGAAGGATCTAGAATGGTTGAAGGAACAAGGTGTTGAGATTCCCAATCCAAGTTCACCTGGTACTACATATGCCAAATATTTAGAGGAACTTGCGGAAAGAAGCGCACCTTTGTTTCTTTCCCATTTCTACAATATCCATTTTTCTCATATAACTGCTGGCCAGGTTATTACAAAGCAGGTATCTGAAAAGCTCCTGGAAGGTAAGGAGCTGGAGTTCTGCAAATGGGAAGGAGATGTACAGGAAATGCTGAAAGATGTACGTGAGAAGCTTAACGTGCTTGCAGAGCATTGGGGTCGGGATGAGAAAAATAAATGTTTAAGAGAAACAAAAAAGTCATTCCAGTTTATGGGACAGATTGTTCGTCTGATCATCTTATAA

Protein sequence

>Msa0146110

MLLTAKPTQLQQPWLPFPPSSTLPNRTRFNTRRRIIILNNSNENNNSNSSSSSSSYPPLVRKRNRYRKLYPGETTGITEEMRFVAMKLHSDKTNTVNNTTSVVVEDCEGQIPDTWYPSMKGFLRFLVDNQLVFATLERIVDDSDNVSYAYLRKTGLERSEGILKDLEWLKEQGVEIPNPSSPGTTYAKYLEELAERSAPLFLSHFYNIHFSHITAGQVITKQVSEKLLEGKELEFCKWEGDVQEMLKDVREKLNVLAEHWGRDEKNKCLRETKKSFQFMGQIVRLIIL*