AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0239980


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0239980 MtrunA17_Chr2g0291061 96.943 229 4 2 1 229 1 226 9.23e-165 453
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0239980 AT3G52155.1 67.598 179 56 1 51 229 38 214 1.61e-85 253
Msa0239980 AT3G52155.3 67.598 179 56 1 51 229 38 214 1.61e-85 253
Msa0239980 AT3G52155.2 69.182 159 47 1 51 209 38 194 1.06e-75 227
Msa0239980 AT3G52155.4 65.806 155 51 1 75 229 13 165 1.41e-72 218

Find 106 sgRNAs with CRISPR-Local

Find 290 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTGGTGGGTGGAAGCTTC+AGG 0.157844 2_2:-14659713 Msa0239980:CDS
TTGGCGCGTAATCTGAAATT+AGG 0.161940 2_2:+14663278 None:intergenic
AACGCCACAAAATCTGAAAT+TGG 0.165377 2_2:-14663386 Msa0239980:five_prime_UTR
CAATCAGATTCTGTTTAATT+TGG 0.217235 2_2:-14659488 Msa0239980:three_prime_UTR
CATGTTGGCCCAACCCATTC+AGG 0.251434 2_2:+14659194 None:intergenic
GGGAATGAGGATTGAGGATT+TGG 0.289186 2_2:+14663259 None:intergenic
TTTAGCTTGGTGTCTTGTTT+GGG 0.296413 2_2:+14663239 None:intergenic
TTCGCCATGCCGAAAGTTCC+TGG 0.311015 2_2:-14663175 Msa0239980:CDS
TGAAATGAGTGTCGACATAA+TGG 0.337985 2_2:-14663460 None:intergenic
TGGCGCGTAATCTGAAATTA+GGG 0.377016 2_2:+14663279 None:intergenic
GGAAGAAAAGAAAGATGAAA+TGG 0.392144 2_2:+14659242 None:intergenic
ACAGGTGCATGGGACACAAC+AGG 0.393604 2_2:-14661149 Msa0239980:intron
AACCCAACTGTTGGAGTTTG+AGG 0.406944 2_2:+14662037 None:intergenic
CATTGCTGAGAGTAAATTGT+TGG 0.408833 2_2:-14659428 Msa0239980:three_prime_UTR
GACCGGCCTCTGAGTAAGTC+AGG 0.413658 2_2:-14662084 Msa0239980:CDS
CTGACCAAACTGATGCGGTT+TGG 0.415237 2_2:+14659583 None:intergenic
TTTGGTGGGTGGAAGCTTCA+GGG 0.416035 2_2:-14659712 Msa0239980:CDS
ATCATCGCCGGAGCAACATT+CGG 0.422099 2_2:-14663304 Msa0239980:CDS
GCATTTGTAGCAGCAGGGTT+TGG 0.423367 2_2:-14659730 Msa0239980:CDS
CTGTTTAATTTGGCAGCAAT+GGG 0.425821 2_2:-14659478 Msa0239980:three_prime_UTR
TTGAAACTGCTGGGAAATCT+TGG 0.430976 2_2:-14661056 Msa0239980:CDS
CAGCGATGCAGCACGGACTA+AGG 0.433131 2_2:-14661909 Msa0239980:CDS
ATCTTGACTAGCTAGCTACT+TGG 0.434900 2_2:+14659679 None:intergenic
TGGTGTCTTGTTTGGGAATG+AGG 0.437396 2_2:+14663246 None:intergenic
TTACAGGCATTTGTAGCAGC+AGG 0.439671 2_2:-14659736 Msa0239980:intron
AACTTTCGGCATGGCGAAGA+AGG 0.440447 2_2:+14663180 None:intergenic
GAAATGAGTGTCGACATAAT+GGG 0.443284 2_2:-14663459 None:intergenic
TCTGTTTAATTTGGCAGCAA+TGG 0.443589 2_2:-14659479 Msa0239980:three_prime_UTR
TGCGTTGTGCAGATCATGAC+CGG 0.444184 2_2:-14662101 Msa0239980:intron
ACGCCACAAAATCTGAAATT+GGG 0.444273 2_2:-14663385 Msa0239980:five_prime_UTR
AGGTTATTTGTAAATATTCA+AGG 0.448646 2_2:-14661769 Msa0239980:CDS
GAATCCAAACCGCATCAGTT+TGG 0.456158 2_2:-14659587 Msa0239980:three_prime_UTR
TACCTAGATAGTATAAGTTC+AGG 0.461088 2_2:+14662009 None:intergenic
ACTAGGGAAAGCATACTAGA+TGG 0.463512 2_2:-14659537 Msa0239980:three_prime_UTR
TTTGTAGCAGCAGGGTTTGG+TGG 0.463635 2_2:-14659727 Msa0239980:CDS
GGAACAAGTGCAGGAACTAC+TGG 0.465275 2_2:-14661867 Msa0239980:CDS
TATTCGATTGCAGCCATGGA+TGG 0.469077 2_2:-14661815 Msa0239980:CDS
TTTCTATTCGATTGCAGCCA+TGG 0.471965 2_2:-14661819 Msa0239980:CDS
TTGTAGCAGCAGGGTTTGGT+GGG 0.472254 2_2:-14659726 Msa0239980:CDS
TCCCTCAAACTCCAACAGTT+GGG 0.472793 2_2:-14662039 Msa0239980:CDS
AGGGTGTTCCCAGGAACTTT+CGG 0.477079 2_2:+14663166 None:intergenic
GGCTTTATACCTCGGAGTGA+AGG 0.477571 2_2:+14663146 None:intergenic
GCTGCACTGCTTGAAACTGC+TGG 0.482315 2_2:-14661066 Msa0239980:CDS
ACCCAACTGTTGGAGTTTGA+GGG 0.487056 2_2:+14662038 None:intergenic
TTCCCTCAAACTCCAACAGT+TGG 0.487121 2_2:-14662040 Msa0239980:CDS
TAGCAGCAGGGTTTGGTGGG+TGG 0.487228 2_2:-14659723 Msa0239980:CDS
CAAACCGCATCAGTTTGGTC+AGG 0.494958 2_2:-14659582 Msa0239980:three_prime_UTR
CAGGTGCATGGGACACAACA+GGG 0.496705 2_2:-14661148 Msa0239980:CDS
CTTTACATTCTATACTAAGC+AGG 0.501853 2_2:+14659396 None:intergenic
AGATGCTCAAAAGATAAAGT+TGG 0.502518 2_2:-14659631 Msa0239980:three_prime_UTR
GAAAACTGTAATGCCCTGAA+TGG 0.507896 2_2:-14659208 Msa0239980:three_prime_UTR
AAGGATGAGGCGGCGAGAGA+TGG 0.508749 2_2:+14663199 None:intergenic
TCAAACTCCAACAGTTGGGT+TGG 0.510018 2_2:-14662035 Msa0239980:CDS
TGCTGGGAAATCTTGGAATG+AGG 0.511570 2_2:-14661049 Msa0239980:intron
AAAGCATACTAGATGGAAGA+TGG 0.515770 2_2:-14659530 Msa0239980:three_prime_UTR
CGAGAGATGGAATCTGAGAA+AGG 0.516129 2_2:+14663212 None:intergenic
TTCCTGAACTTATACTATCT+AGG 0.516546 2_2:-14662011 Msa0239980:intron
ATGTTGGCCCAACCCATTCA+GGG 0.521865 2_2:+14659195 None:intergenic
GGCGATGATTGAGGTGGTGG+TGG 0.532803 2_2:+14663318 None:intergenic
ACAACAACACAAAGCAAACC+AGG 0.533748 2_2:-14663414 Msa0239980:five_prime_UTR
AACCGCAGATCACCTTCAAA+AGG 0.534911 2_2:-14661789 Msa0239980:CDS
TCGCCATGCCGAAAGTTCCT+GGG 0.538733 2_2:-14663174 Msa0239980:CDS
TTGTTTGGGAATGAGGATTG+AGG 0.539065 2_2:+14663253 None:intergenic
TGTAATGCCCTGAATGGGTT+GGG 0.542094 2_2:-14659202 Msa0239980:three_prime_UTR
GGTTATTTGTAAATATTCAA+GGG 0.542148 2_2:-14661768 Msa0239980:CDS
ATTCGATTGCAGCCATGGAT+GGG 0.543191 2_2:-14661814 Msa0239980:CDS
TAGGGTTCCGAATGTTGCTC+CGG 0.545131 2_2:+14663297 None:intergenic
TCCGGCGATGATTGAGGTGG+TGG 0.546028 2_2:+14663315 None:intergenic
GATAATGCAGGAACAAGTGC+AGG 0.547850 2_2:-14661876 Msa0239980:CDS
CGGCATGGCGAAGAAGGATG+AGG 0.548351 2_2:+14663186 None:intergenic
GCTTTATACCTCGGAGTGAA+GGG 0.548651 2_2:+14663147 None:intergenic
TCGGAGTGAAGGGTGTTCCC+AGG 0.556542 2_2:+14663157 None:intergenic
ATCTGCGGTTTGCCCATCCA+TGG 0.557110 2_2:+14661802 None:intergenic
ATTGCTCAGAGCTCATGACT+AGG 0.557619 2_2:-14659554 Msa0239980:three_prime_UTR
CTGCACTGCTTGAAACTGCT+GGG 0.562340 2_2:-14661065 Msa0239980:CDS
TTGGGTGGTCTACAGGTGCA+TGG 0.562923 2_2:-14661160 Msa0239980:intron
GTGGTGGAAAGGTGAATTGA+CGG 0.563324 2_2:+14663334 None:intergenic
AAAACTGTAATGCCCTGAAT+GGG 0.564567 2_2:-14659207 Msa0239980:three_prime_UTR
ACCACCACCTCAATCATCGC+CGG 0.572284 2_2:-14663316 Msa0239980:CDS
CAGGAATCCAACCCAACTGT+TGG 0.577443 2_2:+14662028 None:intergenic
AAATGAGTGTCGACATAATG+GGG 0.577838 2_2:-14663458 None:intergenic
TCCCTGACTTACTCAGAGGC+CGG 0.580646 2_2:+14662082 None:intergenic
GGAGACACTCAAGATAATGC+AGG 0.584126 2_2:-14661888 Msa0239980:CDS
TGGGTGGTCTACAGGTGCAT+GGG 0.587485 2_2:-14661159 Msa0239980:intron
TGTTGCTCCGGCGATGATTG+AGG 0.595491 2_2:+14663309 None:intergenic
GCCTCTGAGTAAGTCAGGGA+AGG 0.597075 2_2:-14662079 Msa0239980:CDS
TACAGGCATTTGTAGCAGCA+GGG 0.598227 2_2:-14659735 Msa0239980:intron
TGATTGAGGTGGTGGTGGAA+AGG 0.598567 2_2:+14663323 None:intergenic
TTGCTCAGAGCTCATGACTA+GGG 0.604327 2_2:-14659553 Msa0239980:three_prime_UTR
GTTCCCAGGAACTTTCGGCA+TGG 0.607984 2_2:+14663171 None:intergenic
AAACCGCATCAGTTTGGTCA+GGG 0.611343 2_2:-14659581 Msa0239980:three_prime_UTR
CTGTAATGCCCTGAATGGGT+TGG 0.611931 2_2:-14659203 Msa0239980:three_prime_UTR
CTTGCGACAGCGATGCAGCA+CGG 0.627397 2_2:-14661916 Msa0239980:intron
ACCGGCCTCTGAGTAAGTCA+GGG 0.632716 2_2:-14662083 Msa0239980:CDS
TCCTTCCCTGACTTACTCAG+AGG 0.643499 2_2:+14662078 None:intergenic
CAACAACACAAAGCAAACCA+GGG 0.652099 2_2:-14663413 Msa0239980:five_prime_UTR
GGTGCATGGGACACAACAGG+GGG 0.655496 2_2:-14661146 Msa0239980:CDS
AGGTGCATGGGACACAACAG+GGG 0.655761 2_2:-14661147 Msa0239980:CDS
CATGGCGAAGAAGGATGAGG+CGG 0.664817 2_2:+14663189 None:intergenic
ACGCCCTGACCAAACTGATG+CGG 0.673309 2_2:+14659578 None:intergenic
TGGGAACACCCTTCACTCCG+AGG 0.676993 2_2:-14663155 Msa0239980:intron
TGAATTGACGGTGCTGCATG+TGG 0.678087 2_2:+14663346 None:intergenic
ACTAGAAACAAAATGAACCT+CGG 0.684849 2_2:+14661841 None:intergenic
GCAGGAACTACTGGACGCCG+AGG 0.701768 2_2:-14661858 Msa0239980:CDS
TGCTCCGGCGATGATTGAGG+TGG 0.724852 2_2:+14663312 None:intergenic
AATGAGTGTCGACATAATGG+GGG 0.732885 2_2:-14663457 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATTAACTTCTAATTAT+AGG - chr2_2:14661805-14661824 Msa0239980:CDS 10.0%
!! CAAAAATAAATTTATAATCT+CGG + chr2_2:14661849-14661868 None:intergenic 10.0%
!! TAAAATATTAATCAATCAAA+AGG + chr2_2:14662777-14662796 None:intergenic 10.0%
!!! TTTGATTGATTAATATTTTA+AGG - chr2_2:14662777-14662796 Msa0239980:intron 10.0%
!!! TTGATTGATTAATATTTTAA+GGG - chr2_2:14662778-14662797 Msa0239980:intron 10.0%
!! AAGATAAAATAATGTCAAAT+TGG + chr2_2:14660352-14660371 None:intergenic 15.0%
!! AAACATAAACATTATTAACA+CGG + chr2_2:14660456-14660475 None:intergenic 15.0%
!!! AAAAGCACAAAAAAAATAAA+TGG + chr2_2:14661181-14661200 None:intergenic 15.0%
!! ATTACATTAATAAGATTTGA+TGG - chr2_2:14661458-14661477 Msa0239980:intron 15.0%
!!! CGAGATTATAAATTTATTTT+TGG - chr2_2:14661847-14661866 Msa0239980:CDS 15.0%
!! AAAGATGATAAAATGATAAT+AGG - chr2_2:14662121-14662140 Msa0239980:intron 15.0%
!!! ATTCTTATTGATTAATGAAT+TGG - chr2_2:14662307-14662326 Msa0239980:intron 15.0%
!!! TGATTGATTAATATTTTAAG+GGG - chr2_2:14662779-14662798 Msa0239980:intron 15.0%
!! CTTTAATTCCAAAAAATGAA+GGG + chr2_2:14659529-14659548 None:intergenic 20.0%
!! ACTTTAATTCCAAAAAATGA+AGG + chr2_2:14659530-14659549 None:intergenic 20.0%
!! GTTTCAAACTTTATTCAATT+AGG - chr2_2:14659548-14659567 Msa0239980:three_prime_UTR 20.0%
!! AAGAAAAAATAAAGTCAAAC+TGG + chr2_2:14659852-14659871 None:intergenic 20.0%
!! TTGAAATGAAAATGTTTGTT+TGG - chr2_2:14660003-14660022 Msa0239980:intron 20.0%
!! AACATAAACATTATTAACAC+GGG + chr2_2:14660455-14660474 None:intergenic 20.0%
!! ATGAAAATGTATTGTTTGTT+TGG - chr2_2:14660493-14660512 Msa0239980:intron 20.0%
!!! ATTTACAAATAACCTTTTGA+AGG + chr2_2:14660877-14660896 None:intergenic 20.0%
!! AGGTTATTTGTAAATATTCA+AGG - chr2_2:14660882-14660901 Msa0239980:intron 20.0%
!! GGTTATTTGTAAATATTCAA+GGG - chr2_2:14660883-14660902 Msa0239980:intron 20.0%
!! AATTTAGAAACCAACATAAA+AGG + chr2_2:14660953-14660972 None:intergenic 20.0%
!! TCTTTATTATCTTTGTATGA+AGG - chr2_2:14660972-14660991 Msa0239980:intron 20.0%
!! ATTGTTGGAAAAAGAATAAA+GGG + chr2_2:14661405-14661424 None:intergenic 20.0%
!! TATTGTTGGAAAAAGAATAA+AGG + chr2_2:14661406-14661425 None:intergenic 20.0%
!! AGCAAATAAAAAGATATTGT+TGG + chr2_2:14661420-14661439 None:intergenic 20.0%
!!! ATTTGATGGATATTTGATAT+TGG - chr2_2:14661472-14661491 Msa0239980:intron 20.0%
!!! TTTGATGGATATTTGATATT+GGG - chr2_2:14661473-14661492 Msa0239980:intron 20.0%
!!! TATTTTTGGAATGTTTTTTG+TGG - chr2_2:14661861-14661880 Msa0239980:CDS 20.0%
!! TGATTAATGAATTGGAAAAT+TGG - chr2_2:14662315-14662334 Msa0239980:intron 20.0%
!! TTCCATCATAAATGTTATAA+TGG - chr2_2:14662352-14662371 Msa0239980:intron 20.0%
!! AACCATTATAACATTTATGA+TGG + chr2_2:14662357-14662376 None:intergenic 20.0%
!! CATAAATGTTATAATGGTTT+AGG - chr2_2:14662358-14662377 Msa0239980:intron 20.0%
!!! CACTAATAAGGTTTTATTTT+AGG + chr2_2:14662604-14662623 None:intergenic 20.0%
!! TCAAATCTTATTATCATGAT+AGG + chr2_2:14662728-14662747 None:intergenic 20.0%
! TTTCCACTAAATTCCTTAAA+CGG + chr2_2:14659581-14659600 None:intergenic 25.0%
! AATTGAAACTGCTTATGTTA+TGG - chr2_2:14659599-14659618 Msa0239980:three_prime_UTR 25.0%
!!! TTTTGTGCTATTTTGAATGT+AGG - chr2_2:14659659-14659678 Msa0239980:three_prime_UTR 25.0%
!!! TTTGTGCTATTTTGAATGTA+GGG - chr2_2:14659660-14659679 Msa0239980:three_prime_UTR 25.0%
!! AATAAGTTGAAAACAGCTTA+TGG + chr2_2:14659777-14659796 None:intergenic 25.0%
! ATTAAGCTGTTTATCCAAAT+AGG - chr2_2:14659920-14659939 Msa0239980:intron 25.0%
!!! AAATGTTTGTTTGGTGTAAA+TGG - chr2_2:14660012-14660031 Msa0239980:intron 25.0%
! AATTGAAACACGTTATGTTA+TGG - chr2_2:14660102-14660121 Msa0239980:intron 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG - chr2_2:14660405-14660424 Msa0239980:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+GGG - chr2_2:14660406-14660425 Msa0239980:intron 25.0%
!!! TATTGTTTGTTTGGTGTAAA+TGG - chr2_2:14660502-14660521 Msa0239980:intron 25.0%
! TTATTATCTTTGTATGAAGG+TGG - chr2_2:14660975-14660994 Msa0239980:intron 25.0%
!!! ACATTGTTTTGTTTTTCCAT+AGG + chr2_2:14661046-14661065 None:intergenic 25.0%
! TATGGAAAAACAAAACAATG+TGG - chr2_2:14661045-14661064 Msa0239980:intron 25.0%
!!! GATGTTGATTCATTAAGTAT+AGG + chr2_2:14661354-14661373 None:intergenic 25.0%
! CGTAAAGAACTATTTAAATC+AGG + chr2_2:14661380-14661399 None:intergenic 25.0%
!! CTTCATAAAAGTATAAACTG+AGG + chr2_2:14661717-14661736 None:intergenic 25.0%
! TTAGAATGTTCAAGGTTTAT+GGG + chr2_2:14662060-14662079 None:intergenic 25.0%
! ATTGTGATGTATGAAATTTG+AGG + chr2_2:14662087-14662106 None:intergenic 25.0%
! CAAATTTCATACATCACAAT+TGG - chr2_2:14662087-14662106 Msa0239980:CDS 25.0%
! AAGTTGAAACAGTTATGTAT+AGG + chr2_2:14662229-14662248 None:intergenic 25.0%
!! ACATAACTGTTTCAACTTTT+AGG - chr2_2:14662231-14662250 Msa0239980:intron 25.0%
! AAAAATATTAGAAACCGTGA+AGG + chr2_2:14662266-14662285 None:intergenic 25.0%
!!! CGGTTTCTAATATTTTTACA+TGG - chr2_2:14662269-14662288 Msa0239980:intron 25.0%
! GCTTAAAAGGTAAAATATCA+AGG + chr2_2:14662582-14662601 None:intergenic 25.0%
!!! GGTTTTATTTTAGGCTTAAA+AGG + chr2_2:14662595-14662614 None:intergenic 25.0%
! TAAAACCTTATTAGTGTAAC+TGG - chr2_2:14662608-14662627 Msa0239980:intron 25.0%
! ATATTATGTAAGCTTCCAAA+AGG - chr2_2:14662841-14662860 Msa0239980:intron 25.0%
!! AAATCGAATACTTTTCCTTT+TGG + chr2_2:14662859-14662878 None:intergenic 25.0%
!!! TTAGATACACAACTTTTTCT+CGG + chr2_2:14662886-14662905 None:intergenic 25.0%
!! TATTAGCAAGATTTTCAGTA+TGG + chr2_2:14663001-14663020 None:intergenic 25.0%
! CAATCAGATTCTGTTTAATT+TGG - chr2_2:14663163-14663182 Msa0239980:CDS 25.0%
!! CATTACAGTTTTCATAATCA+AGG + chr2_2:14663436-14663455 None:intergenic 25.0%
! ATACCCAATTTCAGATTTTG+TGG + chr2_2:14659272-14659291 None:intergenic 30.0%
!!! GTATAAAGCCCTTCATTTTT+TGG - chr2_2:14659518-14659537 Msa0239980:three_prime_UTR 30.0%
TTCCACTAAATTCCTTAAAC+GGG + chr2_2:14659580-14659599 None:intergenic 30.0%
TTCTGGATAAAACAGATACT+GGG - chr2_2:14659629-14659648 Msa0239980:three_prime_UTR 30.0%
! TTTTGAATGTAGGGTCTATT+TGG - chr2_2:14659669-14659688 Msa0239980:three_prime_UTR 30.0%
ATAACATGAGTGAGTGTTAA+AGG + chr2_2:14659954-14659973 None:intergenic 30.0%
TTCTACGTAAAACAAGTAGT+GGG - chr2_2:14660132-14660151 Msa0239980:intron 30.0%
!! TGACTAATTTTGAGAGCTAA+TGG - chr2_2:14660231-14660250 Msa0239980:intron 30.0%
AATAAGCTCAAAACAGCTTA+TGG + chr2_2:14660275-14660294 None:intergenic 30.0%
TAATACTTTATGACCCTGTT+TGG + chr2_2:14660422-14660441 None:intergenic 30.0%
TTCCTGAACTTATACTATCT+AGG - chr2_2:14660640-14660659 Msa0239980:intron 30.0%
TACCTAGATAGTATAAGTTC+AGG + chr2_2:14660645-14660664 None:intergenic 30.0%
TGAACTTATACTATCTAGGT+AGG - chr2_2:14660644-14660663 Msa0239980:intron 30.0%
GAACTTATACTATCTAGGTA+GGG - chr2_2:14660645-14660664 Msa0239980:intron 30.0%
ACTAGAAACAAAATGAACCT+CGG + chr2_2:14660813-14660832 None:intergenic 30.0%
!! TTTTGTCTAGCCTTTTATGT+TGG - chr2_2:14660940-14660959 Msa0239980:intron 30.0%
! TGTTTTTCCATAGGTTGTTT+GGG + chr2_2:14661037-14661056 None:intergenic 30.0%
!! TTGTTTTTCCATAGGTTGTT+TGG + chr2_2:14661038-14661057 None:intergenic 30.0%
ATAATGCTATATTTGCAGAG+TGG - chr2_2:14661090-14661109 Msa0239980:CDS 30.0%
GGTCAAATATGGAAATTTAG+TGG - chr2_2:14661144-14661163 Msa0239980:CDS 30.0%
! CTCTAAAAGTTCAAAACAGA+TGG + chr2_2:14661210-14661229 None:intergenic 30.0%
!! CATCTGTTTTGAACTTTTAG+AGG - chr2_2:14661208-14661227 Msa0239980:intron 30.0%
! TTTTCAACCTTTCAACACTA+TGG - chr2_2:14661236-14661255 Msa0239980:intron 30.0%
!!! GATTCAACCAATTTTGAGTT+GGG + chr2_2:14661269-14661288 None:intergenic 30.0%
!! AGATTCAACCAATTTTGAGT+TGG + chr2_2:14661270-14661289 None:intergenic 30.0%
AAGAACTATTTAAATCAGGC+TGG + chr2_2:14661376-14661395 None:intergenic 30.0%
TTAATGTACACAATTGTGCA+AGG + chr2_2:14661641-14661660 None:intergenic 30.0%
! TGCATTTATTGTGTCTTTTG+TGG - chr2_2:14661675-14661694 Msa0239980:intron 30.0%
!!! GTGTATTCTTGTTCCTTTTT+TGG - chr2_2:14661963-14661982 Msa0239980:intron 30.0%
AGTCAACCAATATTTACCAT+TGG - chr2_2:14661990-14662009 Msa0239980:intron 30.0%
GTCAACCAATATTTACCATT+GGG - chr2_2:14661991-14662010 Msa0239980:intron 30.0%
TCAACCAATATTTACCATTG+GGG - chr2_2:14661992-14662011 Msa0239980:intron 30.0%
GTTAGAATGTTCAAGGTTTA+TGG + chr2_2:14662061-14662080 None:intergenic 30.0%
AGTTATGTATAGGTCATGAA+TGG + chr2_2:14662219-14662238 None:intergenic 30.0%
AGTTCCAGTAACTTCAATTA+CGG - chr2_2:14662482-14662501 Msa0239980:intron 30.0%
AAGGTAAAATATCAAGGCTT+GGG + chr2_2:14662576-14662595 None:intergenic 30.0%
AAAGGTAAAATATCAAGGCT+TGG + chr2_2:14662577-14662596 None:intergenic 30.0%
AAGTTCCAGTTACACTAATA+AGG + chr2_2:14662616-14662635 None:intergenic 30.0%
TCTCATTGATATCCTTTCTT+GGG + chr2_2:14662670-14662689 None:intergenic 30.0%
ATCTCATTGATATCCTTTCT+TGG + chr2_2:14662671-14662690 None:intergenic 30.0%
TATCTAACATTGCATCTTAC+AGG - chr2_2:14662899-14662918 Msa0239980:intron 30.0%
AGATGCTCAAAAGATAAAGT+TGG - chr2_2:14663020-14663039 Msa0239980:intron 30.0%
!! GAAGCATCATTGCTTATTTT+AGG - chr2_2:14663042-14663061 Msa0239980:intron 30.0%
CTTTACATTCTATACTAAGC+AGG + chr2_2:14663258-14663277 None:intergenic 30.0%
GGAAGAAAAGAAAGATGAAA+TGG + chr2_2:14663412-14663431 None:intergenic 30.0%
! TACAGTTTTCATAATCAAGG+TGG + chr2_2:14663433-14663452 None:intergenic 30.0%
! AACGCCACAAAATCTGAAAT+TGG - chr2_2:14659265-14659284 Msa0239980:three_prime_UTR 35.0%
! ACGCCACAAAATCTGAAATT+GGG - chr2_2:14659266-14659285 Msa0239980:three_prime_UTR 35.0%
!! TTTAGCTTGGTGTCTTGTTT+GGG + chr2_2:14659415-14659434 None:intergenic 35.0%
!!! TTTTAGCTTGGTGTCTTGTT+TGG + chr2_2:14659416-14659435 None:intergenic 35.0%
! AAATGAAGGGCTTTATACCT+CGG + chr2_2:14659516-14659535 None:intergenic 35.0%
TTCCCGTTTAAGGAATTTAG+TGG - chr2_2:14659575-14659594 Msa0239980:three_prime_UTR 35.0%
!! TATGTTATGGCTTCTAGTTC+TGG - chr2_2:14659612-14659631 Msa0239980:three_prime_UTR 35.0%
! GTTCTGGATAAAACAGATAC+TGG - chr2_2:14659628-14659647 Msa0239980:three_prime_UTR 35.0%
AAGCACTTGTATGAGTGTTT+AGG - chr2_2:14659722-14659741 Msa0239980:CDS 35.0%
AGCACTTGTATGAGTGTTTA+GGG - chr2_2:14659723-14659742 Msa0239980:CDS 35.0%
AAGCTAACACAGAGAACTTA+TGG + chr2_2:14659801-14659820 None:intergenic 35.0%
ATGAGTGAGTGTTAAAGGTT+GGG + chr2_2:14659949-14659968 None:intergenic 35.0%
!! TGTTTGTTTGGTGTAAATGG+AGG - chr2_2:14660015-14660034 Msa0239980:intron 35.0%
GTGTCAAACTCTATTCAACT+TGG - chr2_2:14660050-14660069 Msa0239980:intron 35.0%
CTATTCAACTTGGAATGTTC+TGG - chr2_2:14660060-14660079 Msa0239980:intron 35.0%
!! ACTTGGAATGTTCTGGTTTA+AGG - chr2_2:14660067-14660086 Msa0239980:intron 35.0%
GTTCTACGTAAAACAAGTAG+TGG - chr2_2:14660131-14660150 Msa0239980:intron 35.0%
!! CTTTGTGCTATTTCAAGTGT+AGG - chr2_2:14660162-14660181 Msa0239980:intron 35.0%
!! TGTTTGTTTGGTGTAAATGG+AGG - chr2_2:14660015-14660034 Msa0239980:intron 35.0%
TTATCTTTGTATGAAGGTGG+AGG - chr2_2:14660978-14660997 Msa0239980:intron 35.0%
ACTGAGAAATCAGATGGTAA+AGG - chr2_2:14661123-14661142 Msa0239980:CDS 35.0%
CAGATGGTAAAGGTCAAATA+TGG - chr2_2:14661133-14661152 Msa0239980:CDS 35.0%
! TTTCAGTCCATAGTGTTGAA+AGG + chr2_2:14661246-14661265 None:intergenic 35.0%
ACTGAAACCCAACTCAAAAT+TGG - chr2_2:14661259-14661278 Msa0239980:intron 35.0%
GAAGAACATCCAATGTTTGT+AGG - chr2_2:14661295-14661314 Msa0239980:intron 35.0%
GATGGATATTTGATATTGGG+TGG - chr2_2:14661476-14661495 Msa0239980:intron 35.0%
AAGATCGCACAGAAATTGTA+TGG - chr2_2:14661753-14661772 Msa0239980:CDS 35.0%
AGATCGCACAGAAATTGTAT+GGG - chr2_2:14661754-14661773 Msa0239980:CDS 35.0%
TTTGTGGAACATGTGTTTGA+AGG - chr2_2:14661877-14661896 Msa0239980:CDS 35.0%
TTGTGGAACATGTGTTTGAA+GGG - chr2_2:14661878-14661897 Msa0239980:CDS 35.0%
!! ACTCCTAACACAGTTTTGTA+GGG + chr2_2:14661941-14661960 None:intergenic 35.0%
ACATCCCCAATGGTAAATAT+TGG + chr2_2:14661999-14662018 None:intergenic 35.0%
GAGGTAAGTTAGAATGTTCA+AGG + chr2_2:14662068-14662087 None:intergenic 35.0%
CATGTGGGTACTAACAAATA+GGG + chr2_2:14662415-14662434 None:intergenic 35.0%
ACATGTGGGTACTAACAAAT+AGG + chr2_2:14662416-14662435 None:intergenic 35.0%
CTTGGGGACTAATCATATAA+GGG + chr2_2:14662559-14662578 None:intergenic 35.0%
AGGTAAAATATCAAGGCTTG+GGG + chr2_2:14662575-14662594 None:intergenic 35.0%
AAACCAGTAGCTATTATGCT+TGG - chr2_2:14662637-14662656 Msa0239980:intron 35.0%
CTCATTGATATCCTTTCTTG+GGG + chr2_2:14662669-14662688 None:intergenic 35.0%
AAAGCATACTAGATGGAAGA+TGG - chr2_2:14663121-14663140 Msa0239980:intron 35.0%
!! TCTGTTTAATTTGGCAGCAA+TGG - chr2_2:14663172-14663191 Msa0239980:CDS 35.0%
!! CTGTTTAATTTGGCAGCAAT+GGG - chr2_2:14663173-14663192 Msa0239980:CDS 35.0%
CATTGCTGAGAGTAAATTGT+TGG - chr2_2:14663223-14663242 Msa0239980:CDS 35.0%
AAAACTGTAATGCCCTGAAT+GGG - chr2_2:14663444-14663463 Msa0239980:five_prime_UTR 35.0%
ACAACAACACAAAGCAAACC+AGG - chr2_2:14659237-14659256 Msa0239980:three_prime_UTR 40.0%
CAACAACACAAAGCAAACCA+GGG - chr2_2:14659238-14659257 Msa0239980:three_prime_UTR 40.0%
! ATTTTGTGGCGTTAAATCCC+TGG + chr2_2:14659258-14659277 None:intergenic 40.0%
! TGGCGCGTAATCTGAAATTA+GGG + chr2_2:14659375-14659394 None:intergenic 40.0%
! TTGGCGCGTAATCTGAAATT+AGG + chr2_2:14659376-14659395 None:intergenic 40.0%
TTGTTTGGGAATGAGGATTG+AGG + chr2_2:14659401-14659420 None:intergenic 40.0%
!! TGAGAAAGGCTCTTTTAGCT+TGG + chr2_2:14659428-14659447 None:intergenic 40.0%
ATTAGGAACGTTCCCGTTTA+AGG - chr2_2:14659565-14659584 Msa0239980:three_prime_UTR 40.0%
GCACTTGTATGAGTGTTTAG+GGG - chr2_2:14659724-14659743 Msa0239980:CDS 40.0%
TAAAGGTTGGGACTCCTATT+TGG + chr2_2:14659937-14659956 None:intergenic 40.0%
CATGAGTGAGTGTTAAAGGT+TGG + chr2_2:14659950-14659969 None:intergenic 40.0%
!! TGCTATTTCAAGTGTAGGAC+TGG - chr2_2:14660167-14660186 Msa0239980:intron 40.0%
!! TTTCAAGTGTAGGACTGGTT+TGG - chr2_2:14660172-14660191 Msa0239980:intron 40.0%
! TATCTAGGTAGGGAGTTTTG+TGG - chr2_2:14660655-14660674 Msa0239980:intron 40.0%
TTTCTATTCGATTGCAGCCA+TGG - chr2_2:14660832-14660851 Msa0239980:intron 40.0%
!! AACCTTTTGAAGGTGATCTG+CGG + chr2_2:14660867-14660886 None:intergenic 40.0%
TATGAAGGTGGAGGTTGAAT+GGG - chr2_2:14660987-14661006 Msa0239980:intron 40.0%
! AGGTTGTTTGGGTTCAAACA+AGG + chr2_2:14661026-14661045 None:intergenic 40.0%
GTTTGAACCCAAACAACCTA+TGG - chr2_2:14661027-14661046 Msa0239980:intron 40.0%
GCTACAACTGAGAAATCAGA+TGG - chr2_2:14661117-14661136 Msa0239980:CDS 40.0%
GAACATCCAATGTTTGTAGG+TGG - chr2_2:14661298-14661317 Msa0239980:intron 40.0%
TAGTGACCACCTACAAACAT+TGG + chr2_2:14661307-14661326 None:intergenic 40.0%
TTTGATATTGGGTGGTCTAC+AGG - chr2_2:14661484-14661503 Msa0239980:intron 40.0%
! AGGCAGCTTCAATGTTTTGT+GGG - chr2_2:14661535-14661554 Msa0239980:intron 40.0%
TTGAAACTGCTGGGAAATCT+TGG - chr2_2:14661595-14661614 Msa0239980:intron 40.0%
TCTCCCTACAAAACTGTGTT+AGG - chr2_2:14661935-14661954 Msa0239980:intron 40.0%
!! CACTCCTAACACAGTTTTGT+AGG + chr2_2:14661942-14661961 None:intergenic 40.0%
! TGGTTGACTCTAGCCAAAAA+AGG + chr2_2:14661979-14661998 None:intergenic 40.0%
TGTCTTACTAGCATGATGGT+AGG - chr2_2:14662016-14662035 Msa0239980:CDS 40.0%
TTAGGAGAGTTAGTCCTTCA+CGG - chr2_2:14662249-14662268 Msa0239980:intron 40.0%
ACATGAAGCTAGAGGTCATA+AGG + chr2_2:14662389-14662408 None:intergenic 40.0%
CAGTAACTTCAATTACGGCA+GGG - chr2_2:14662487-14662506 Msa0239980:intron 40.0%
GCTTGGGGACTAATCATATA+AGG + chr2_2:14662560-14662579 None:intergenic 40.0%
TTGATATCCTTTCTTGGGGT+AGG + chr2_2:14662665-14662684 None:intergenic 40.0%
! ATCTTGACTAGCTAGCTACT+TGG + chr2_2:14662975-14662994 None:intergenic 40.0%
! ACTAGGGAAAGCATACTAGA+TGG - chr2_2:14663114-14663133 Msa0239980:intron 40.0%
GAAAACTGTAATGCCCTGAA+TGG - chr2_2:14663443-14663462 Msa0239980:five_prime_UTR 40.0%
! GTGGTGGAAAGGTGAATTGA+CGG + chr2_2:14659320-14659339 None:intergenic 45.0%
GGGAATGAGGATTGAGGATT+TGG + chr2_2:14659395-14659414 None:intergenic 45.0%
!! TGGTGTCTTGTTTGGGAATG+AGG + chr2_2:14659408-14659427 None:intergenic 45.0%
CGAGAGATGGAATCTGAGAA+AGG + chr2_2:14659442-14659461 None:intergenic 45.0%
GCTTTATACCTCGGAGTGAA+GGG + chr2_2:14659507-14659526 None:intergenic 45.0%
TTCCCTCAAACTCCAACAGT+TGG - chr2_2:14660611-14660630 Msa0239980:intron 45.0%
TCCCTCAAACTCCAACAGTT+GGG - chr2_2:14660612-14660631 Msa0239980:intron 45.0%
ACCCAACTGTTGGAGTTTGA+GGG + chr2_2:14660616-14660635 None:intergenic 45.0%
AACCCAACTGTTGGAGTTTG+AGG + chr2_2:14660617-14660636 None:intergenic 45.0%
TCAAACTCCAACAGTTGGGT+TGG - chr2_2:14660616-14660635 Msa0239980:intron 45.0%
!! GAGTTTGCTGTCTGTCTTTG+AGG - chr2_2:14660692-14660711 Msa0239980:intron 45.0%
GGAGACACTCAAGATAATGC+AGG - chr2_2:14660763-14660782 Msa0239980:intron 45.0%
GATAATGCAGGAACAAGTGC+AGG - chr2_2:14660775-14660794 Msa0239980:intron 45.0%
TATTCGATTGCAGCCATGGA+TGG - chr2_2:14660836-14660855 Msa0239980:intron 45.0%
ATTCGATTGCAGCCATGGAT+GGG - chr2_2:14660837-14660856 Msa0239980:intron 45.0%
AACCGCAGATCACCTTCAAA+AGG - chr2_2:14660862-14660881 Msa0239980:intron 45.0%
GTATGAAGGTGGAGGTTGAA+TGG - chr2_2:14660986-14661005 Msa0239980:intron 45.0%
! GAGGCAGCTTCAATGTTTTG+TGG - chr2_2:14661534-14661553 Msa0239980:intron 45.0%
! GGCAGCTTCAATGTTTTGTG+GGG - chr2_2:14661536-14661555 Msa0239980:intron 45.0%
TGCTGGGAAATCTTGGAATG+AGG - chr2_2:14661602-14661621 Msa0239980:intron 45.0%
TGCTAGTAAGACATCCCCAA+TGG + chr2_2:14662009-14662028 None:intergenic 45.0%
GGGATGTCTTACTAGCATGA+TGG - chr2_2:14662012-14662031 Msa0239980:CDS 45.0%
! TAGGGAGTACATGAAGCTAG+AGG + chr2_2:14662397-14662416 None:intergenic 45.0%
GAATGTTGTGTGCGACATGT+GGG + chr2_2:14662430-14662449 None:intergenic 45.0%
CCTGCCGTAATTGAAGTTAC+TGG + chr2_2:14662489-14662508 None:intergenic 45.0%
CCAGTAACTTCAATTACGGC+AGG - chr2_2:14662486-14662505 Msa0239980:intron 45.0%
GTGCCAAGCATAATAGCTAC+TGG + chr2_2:14662643-14662662 None:intergenic 45.0%
AACATAGTCGCACACCACTA+CGG - chr2_2:14662748-14662767 Msa0239980:intron 45.0%
CAATCAAAAGGTGACCGTAG+TGG + chr2_2:14662765-14662784 None:intergenic 45.0%
TTACAGGCATTTGTAGCAGC+AGG - chr2_2:14662915-14662934 Msa0239980:intron 45.0%
TACAGGCATTTGTAGCAGCA+GGG - chr2_2:14662916-14662935 Msa0239980:intron 45.0%
GAATCCAAACCGCATCAGTT+TGG - chr2_2:14663064-14663083 Msa0239980:intron 45.0%
AAACCGCATCAGTTTGGTCA+GGG - chr2_2:14663070-14663089 Msa0239980:intron 45.0%
ATTGCTCAGAGCTCATGACT+AGG - chr2_2:14663097-14663116 Msa0239980:intron 45.0%
TTGCTCAGAGCTCATGACTA+GGG - chr2_2:14663098-14663117 Msa0239980:intron 45.0%
! TGTAATGCCCTGAATGGGTT+GGG - chr2_2:14663449-14663468 Msa0239980:five_prime_UTR 45.0%
! TCGACATAATGGGGGCACAA+TGG - chr2_2:14659202-14659221 Msa0239980:three_prime_UTR 50.0%
!! TGAATTGACGGTGCTGCATG+TGG + chr2_2:14659308-14659327 None:intergenic 50.0%
!! TGATTGAGGTGGTGGTGGAA+AGG + chr2_2:14659331-14659350 None:intergenic 50.0%
ATCATCGCCGGAGCAACATT+CGG - chr2_2:14659347-14659366 Msa0239980:three_prime_UTR 50.0%
TAGGGTTCCGAATGTTGCTC+CGG + chr2_2:14659357-14659376 None:intergenic 50.0%
AACTTTCGGCATGGCGAAGA+AGG + chr2_2:14659474-14659493 None:intergenic 50.0%
! AGGGTGTTCCCAGGAACTTT+CGG + chr2_2:14659488-14659507 None:intergenic 50.0%
! GGCTTTATACCTCGGAGTGA+AGG + chr2_2:14659508-14659527 None:intergenic 50.0%
TGCGTTGTGCAGATCATGAC+CGG - chr2_2:14660550-14660569 Msa0239980:intron 50.0%
TCCTTCCCTGACTTACTCAG+AGG + chr2_2:14660576-14660595 None:intergenic 50.0%
CAGGAATCCAACCCAACTGT+TGG + chr2_2:14660626-14660645 None:intergenic 50.0%
GGAACAAGTGCAGGAACTAC+TGG - chr2_2:14660784-14660803 Msa0239980:intron 50.0%
CTGCACTGCTTGAAACTGCT+GGG - chr2_2:14661586-14661605 Msa0239980:intron 50.0%
CGAATGTTGTGTGCGACATG+TGG + chr2_2:14662431-14662450 None:intergenic 50.0%
! CAGGGAATGTCTTTTGCTCG+TGG - chr2_2:14662505-14662524 Msa0239980:intron 50.0%
GCATTTGTAGCAGCAGGGTT+TGG - chr2_2:14662921-14662940 Msa0239980:intron 50.0%
TTTGTAGCAGCAGGGTTTGG+TGG - chr2_2:14662924-14662943 Msa0239980:intron 50.0%
! TTGTAGCAGCAGGGTTTGGT+GGG - chr2_2:14662925-14662944 Msa0239980:intron 50.0%
! TTTGGTGGGTGGAAGCTTCA+GGG - chr2_2:14662939-14662958 Msa0239980:intron 50.0%
CTGACCAAACTGATGCGGTT+TGG + chr2_2:14663071-14663090 None:intergenic 50.0%
CAAACCGCATCAGTTTGGTC+AGG - chr2_2:14663069-14663088 Msa0239980:intron 50.0%
CTGTAATGCCCTGAATGGGT+TGG - chr2_2:14663448-14663467 Msa0239980:five_prime_UTR 50.0%
ACCACCACCTCAATCATCGC+CGG - chr2_2:14659335-14659354 Msa0239980:three_prime_UTR 55.0%
TGTTGCTCCGGCGATGATTG+AGG + chr2_2:14659345-14659364 None:intergenic 55.0%
CATGGCGAAGAAGGATGAGG+CGG + chr2_2:14659465-14659484 None:intergenic 55.0%
TTCGCCATGCCGAAAGTTCC+TGG - chr2_2:14659476-14659495 Msa0239980:three_prime_UTR 55.0%
TCGCCATGCCGAAAGTTCCT+GGG - chr2_2:14659477-14659496 Msa0239980:three_prime_UTR 55.0%
GTTCCCAGGAACTTTCGGCA+TGG + chr2_2:14659483-14659502 None:intergenic 55.0%
ACCGGCCTCTGAGTAAGTCA+GGG - chr2_2:14660568-14660587 Msa0239980:intron 55.0%
TCCCTGACTTACTCAGAGGC+CGG + chr2_2:14660572-14660591 None:intergenic 55.0%
GCCTCTGAGTAAGTCAGGGA+AGG - chr2_2:14660572-14660591 Msa0239980:intron 55.0%
ATCTGCGGTTTGCCCATCCA+TGG + chr2_2:14660852-14660871 None:intergenic 55.0%
TTGGGTGGTCTACAGGTGCA+TGG - chr2_2:14661491-14661510 Msa0239980:intron 55.0%
TGGGTGGTCTACAGGTGCAT+GGG - chr2_2:14661492-14661511 Msa0239980:intron 55.0%
ACAGGTGCATGGGACACAAC+AGG - chr2_2:14661502-14661521 Msa0239980:intron 55.0%
CAGGTGCATGGGACACAACA+GGG - chr2_2:14661503-14661522 Msa0239980:intron 55.0%
AGGTGCATGGGACACAACAG+GGG - chr2_2:14661504-14661523 Msa0239980:intron 55.0%
GCTGCACTGCTTGAAACTGC+TGG - chr2_2:14661585-14661604 Msa0239980:intron 55.0%
CTTGGCACCTACCCCAAGAA+AGG - chr2_2:14662655-14662674 Msa0239980:intron 55.0%
! GTTTGGTGGGTGGAAGCTTC+AGG - chr2_2:14662938-14662957 Msa0239980:intron 55.0%
ACGCCCTGACCAAACTGATG+CGG + chr2_2:14663076-14663095 None:intergenic 55.0%
! GGCGATGATTGAGGTGGTGG+TGG + chr2_2:14659336-14659355 None:intergenic 60.0%
TCCGGCGATGATTGAGGTGG+TGG + chr2_2:14659339-14659358 None:intergenic 60.0%
TGCTCCGGCGATGATTGAGG+TGG + chr2_2:14659342-14659361 None:intergenic 60.0%
AAGGATGAGGCGGCGAGAGA+TGG + chr2_2:14659455-14659474 None:intergenic 60.0%
CGGCATGGCGAAGAAGGATG+AGG + chr2_2:14659468-14659487 None:intergenic 60.0%
!! TCGGAGTGAAGGGTGTTCCC+AGG + chr2_2:14659497-14659516 None:intergenic 60.0%
TGGGAACACCCTTCACTCCG+AGG - chr2_2:14659496-14659515 Msa0239980:three_prime_UTR 60.0%
GACCGGCCTCTGAGTAAGTC+AGG - chr2_2:14660567-14660586 Msa0239980:intron 60.0%
CTTGCGACAGCGATGCAGCA+CGG - chr2_2:14660735-14660754 Msa0239980:intron 60.0%
! CAGCGATGCAGCACGGACTA+AGG - chr2_2:14660742-14660761 Msa0239980:intron 60.0%
GGTGCATGGGACACAACAGG+GGG - chr2_2:14661505-14661524 Msa0239980:intron 60.0%
CATGGGACACAACAGGGGGT+GGG - chr2_2:14661509-14661528 Msa0239980:intron 60.0%
ACACAACAGGGGGTGGGAAG+AGG - chr2_2:14661515-14661534 Msa0239980:intron 60.0%
!! TAGCAGCAGGGTTTGGTGGG+TGG - chr2_2:14662928-14662947 Msa0239980:intron 60.0%
GCAGGAACTACTGGACGCCG+AGG - chr2_2:14660793-14660812 Msa0239980:intron 65.0%
GCATGGGACACAACAGGGGG+TGG - chr2_2:14661508-14661527 Msa0239980:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 14659201 14663472 14659201 ID=Msa0239980;Name=Msa0239980
chr2_2 mRNA 14659201 14663472 14659201 ID=Msa0239980-mRNA-1;Parent=Msa0239980;Name=Msa0239980-mRNA-1;_AED=0.10;_eAED=0.10;_QI=94|0.6|0.83|1|0.6|0.66|6|489|229
chr2_2 exon 14659201 14659752 14659201 ID=Msa0239980-mRNA-1:exon:6079;Parent=Msa0239980-mRNA-1
chr2_2 exon 14661050 14661167 14661050 ID=Msa0239980-mRNA-1:exon:6078;Parent=Msa0239980-mRNA-1
chr2_2 exon 14661674 14661679 14661674 ID=Msa0239980-mRNA-1:exon:6077;Parent=Msa0239980-mRNA-1
chr2_2 exon 14661749 14661928 14661749 ID=Msa0239980-mRNA-1:exon:6076;Parent=Msa0239980-mRNA-1
chr2_2 exon 14662012 14662111 14662012 ID=Msa0239980-mRNA-1:exon:6075;Parent=Msa0239980-mRNA-1
chr2_2 exon 14663156 14663472 14663156 ID=Msa0239980-mRNA-1:exon:6074;Parent=Msa0239980-mRNA-1
chr2_2 five_prime_UTR 14663379 14663472 14663379 ID=Msa0239980-mRNA-1:five_prime_utr;Parent=Msa0239980-mRNA-1
chr2_2 CDS 14663156 14663378 14663156 ID=Msa0239980-mRNA-1:cds;Parent=Msa0239980-mRNA-1
chr2_2 CDS 14662012 14662111 14662012 ID=Msa0239980-mRNA-1:cds;Parent=Msa0239980-mRNA-1
chr2_2 CDS 14661749 14661928 14661749 ID=Msa0239980-mRNA-1:cds;Parent=Msa0239980-mRNA-1
chr2_2 CDS 14661674 14661679 14661674 ID=Msa0239980-mRNA-1:cds;Parent=Msa0239980-mRNA-1
chr2_2 CDS 14661050 14661167 14661050 ID=Msa0239980-mRNA-1:cds;Parent=Msa0239980-mRNA-1
chr2_2 CDS 14659690 14659752 14659690 ID=Msa0239980-mRNA-1:cds;Parent=Msa0239980-mRNA-1
chr2_2 three_prime_UTR 14659201 14659689 14659201 ID=Msa0239980-mRNA-1:three_prime_utr;Parent=Msa0239980-mRNA-1
Gene Sequence

>Msa0239980

ATGCATTCTACCACATGCAGCACCGTCAATTCACCTTTCCACCACCACCTCAATCATCGCCGGAGCAACATTCGGAACCCTAATTTCAGATTACGCGCCAAATCCTCAATCCTCATTCCCAAACAAGACACCAAGCTAAAAGAGCCTTTCTCAGATTCCATCTCTCGCCGCCTCATCCTTCTTCGCCATGCCGAAAGTTCCTGGGAACACCCTTCACTCCGAGATCATGACCGGCCTCTGAGTAAGTCAGGGAAGGAAGATGCTGTGAAAGTTTCCCTCAAACTCCAACAGTTGGGTTGGATTCCTGAACTTATACTATCTAGCGATGCAGCACGGACTAAGGAGACACTCAAGATAATGCAGGAACAAGTGCAGGAACTACTGGACGCCGAGGTTCATTTTGTTTCTAGTTTCTATTCGATTGCAGCCATGGATGGGCAAACCGCAGATCACCTTCAAAAGGTTATTTGTAAATATTCAAGGGATGAGATATTAACTGTCATGTGGAGGTGCATGGGACACAACAGGGGGTGGGAAGAGGCAGCTTCAATGTTTTGTGGGGCATCTGTAGAATTAAAGACATGCAATGCTGCACTGCTTGAAACTGCTGGGAAATCTTGGAATGAGGCATTTGTAGCAGCAGGGTTTGGTGGGTGGAAGCTTCAGGGCATATTAAAACCAAGTAGCTAG

Protein sequence

>Msa0239980

MHSTTCSTVNSPFHHHLNHRRSNIRNPNFRLRAKSSILIPKQDTKLKEPFSDSISRRLILLRHAESSWEHPSLRDHDRPLSKSGKEDAVKVSLKLQQLGWIPELILSSDAARTKETLKIMQEQVQELLDAEVHFVSSFYSIAAMDGQTADHLQKVICKYSRDEILTVMWRCMGHNRGWEEAASMFCGASVELKTCNAALLETAGKSWNEAFVAAGFGGWKLQGILKPSS*