Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061724.t1 | AAX63898.1 | 98.7 | 462 | 6 | 0 | 1 | 462 | 1 | 462 | 1.10E-263 | 918.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061724.t1 | Q9ZS34 | 84.7 | 465 | 67 | 2 | 1 | 462 | 1 | 464 | 5.7e-229 | 794.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061724.t1 | Q56GA3 | 98.7 | 462 | 6 | 0 | 1 | 462 | 1 | 462 | 7.8e-264 | 918.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene061724 | 0.81875 | 1.67E-52 | -1.69E-46 |
| MS.gene049173 | MS.gene061724 | 0.854077 | 1.57E-61 | -1.69E-46 |
| MS.gene049217 | MS.gene061724 | 0.835003 | 2.16E-56 | -1.69E-46 |
| MS.gene049222 | MS.gene061724 | 0.868029 | 8.84E-66 | -1.69E-46 |
| MS.gene049232 | MS.gene061724 | 0.858589 | 7.42E-63 | -1.69E-46 |
| MS.gene049285 | MS.gene061724 | 0.873328 | 1.60E-67 | -1.69E-46 |
| MS.gene049320 | MS.gene061724 | 0.875259 | 3.55E-68 | -1.69E-46 |
| MS.gene049356 | MS.gene061724 | 0.807389 | 5.18E-50 | -1.69E-46 |
| MS.gene049369 | MS.gene061724 | 0.866063 | 3.75E-65 | -1.69E-46 |
| MS.gene049396 | MS.gene061724 | 0.807861 | 4.11E-50 | -1.69E-46 |
| MS.gene049427 | MS.gene061724 | 0.808978 | 2.37E-50 | -1.69E-46 |
| MS.gene049600 | MS.gene061724 | 0.812623 | 3.86E-51 | -1.69E-46 |
| MS.gene049609 | MS.gene061724 | 0.845249 | 4.57E-59 | -1.69E-46 |
| MS.gene049615 | MS.gene061724 | 0.848982 | 4.33E-60 | -1.69E-46 |
| MS.gene049805 | MS.gene061724 | 0.834227 | 3.39E-56 | -1.69E-46 |
| MS.gene049828 | MS.gene061724 | 0.845405 | 4.15E-59 | -1.69E-46 |
| MS.gene049907 | MS.gene061724 | 0.839325 | 1.70E-57 | -1.69E-46 |
| MS.gene05010 | MS.gene061724 | 0.842524 | 2.45E-58 | -1.69E-46 |
| MS.gene050163 | MS.gene061724 | 0.850476 | 1.66E-60 | -1.69E-46 |
| MS.gene050165 | MS.gene061724 | 0.839936 | 1.18E-57 | -1.69E-46 |
| MS.gene050216 | MS.gene061724 | 0.81061 | 1.06E-50 | -1.69E-46 |
| MS.gene050323 | MS.gene061724 | 0.81222 | 4.73E-51 | -1.69E-46 |
| MS.gene050333 | MS.gene061724 | 0.864652 | 1.04E-64 | -1.69E-46 |
| MS.gene050499 | MS.gene061724 | 0.80077 | 1.23E-48 | -1.69E-46 |
| MS.gene050502 | MS.gene061724 | 0.826687 | 2.37E-54 | -1.69E-46 |
| MS.gene050504 | MS.gene061724 | 0.844391 | 7.79E-59 | -1.69E-46 |
| MS.gene050518 | MS.gene061724 | 0.860343 | 2.21E-63 | -1.69E-46 |
| MS.gene050520 | MS.gene061724 | 0.846072 | 2.73E-59 | -1.69E-46 |
| MS.gene050577 | MS.gene061724 | 0.800365 | 1.49E-48 | -1.69E-46 |
| MS.gene050593 | MS.gene061724 | 0.82833 | 9.54E-55 | -1.69E-46 |
| MS.gene050612 | MS.gene061724 | 0.843155 | 1.67E-58 | -1.69E-46 |
| MS.gene050662 | MS.gene061724 | 0.817586 | 3.05E-52 | -1.69E-46 |
| MS.gene050675 | MS.gene061724 | 0.84548 | 3.96E-59 | -1.69E-46 |
| MS.gene050686 | MS.gene061724 | 0.846242 | 2.46E-59 | -1.69E-46 |
| MS.gene050699 | MS.gene061724 | 0.843536 | 1.32E-58 | -1.69E-46 |
| MS.gene050747 | MS.gene061724 | 0.835655 | 1.48E-56 | -1.69E-46 |
| MS.gene050767 | MS.gene061724 | 0.839911 | 1.19E-57 | -1.69E-46 |
| MS.gene050770 | MS.gene061724 | 0.839309 | 1.71E-57 | -1.69E-46 |
| MS.gene050772 | MS.gene061724 | 0.890269 | 1.15E-73 | -1.69E-46 |
| MS.gene050950 | MS.gene061724 | 0.825545 | 4.42E-54 | -1.69E-46 |
| MS.gene050986 | MS.gene061724 | 0.84862 | 5.46E-60 | -1.69E-46 |
| MS.gene05100 | MS.gene061724 | 0.864651 | 1.04E-64 | -1.69E-46 |
| MS.gene05105 | MS.gene061724 | 0.822338 | 2.50E-53 | -1.69E-46 |
| MS.gene051228 | MS.gene061724 | 0.835942 | 1.25E-56 | -1.69E-46 |
| MS.gene051387 | MS.gene061724 | 0.826155 | 3.17E-54 | -1.69E-46 |
| MS.gene051509 | MS.gene061724 | 0.864563 | 1.11E-64 | -1.69E-46 |
| MS.gene051551 | MS.gene061724 | 0.854415 | 1.25E-61 | -1.69E-46 |
| MS.gene051666 | MS.gene061724 | 0.825413 | 4.75E-54 | -1.69E-46 |
| MS.gene051692 | MS.gene061724 | 0.838916 | 2.16E-57 | -1.69E-46 |
| MS.gene051694 | MS.gene061724 | 0.802395 | 5.73E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene061724 | 0.832213 | 1.07E-55 | -1.69E-46 |
| MS.gene051858 | MS.gene061724 | 0.818852 | 1.58E-52 | -1.69E-46 |
| MS.gene051949 | MS.gene061724 | 0.80969 | 1.67E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene061724 | 0.807114 | 5.92E-50 | -1.69E-46 |
| MS.gene052271 | MS.gene061724 | 0.874771 | 5.21E-68 | -1.69E-46 |
| MS.gene052379 | MS.gene061724 | 0.815282 | 1.00E-51 | -1.69E-46 |
| MS.gene052421 | MS.gene061724 | 0.811484 | 6.84E-51 | -1.69E-46 |
| MS.gene052482 | MS.gene061724 | 0.805454 | 1.32E-49 | -1.69E-46 |
| MS.gene052484 | MS.gene061724 | 0.81385 | 2.08E-51 | -1.69E-46 |
| MS.gene052486 | MS.gene061724 | 0.821412 | 4.09E-53 | -1.69E-46 |
| MS.gene052503 | MS.gene061724 | 0.807016 | 6.21E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene061724 | 0.812363 | 4.40E-51 | -1.69E-46 |
| MS.gene052823 | MS.gene061724 | 0.800397 | 1.47E-48 | -1.69E-46 |
| MS.gene052916 | MS.gene061724 | 0.841894 | 3.60E-58 | -1.69E-46 |
| MS.gene052966 | MS.gene061724 | 0.837128 | 6.24E-57 | -1.69E-46 |
| MS.gene053018 | MS.gene061724 | 0.812028 | 5.21E-51 | -1.69E-46 |
| MS.gene053103 | MS.gene061724 | 0.806564 | 7.74E-50 | -1.69E-46 |
| MS.gene053104 | MS.gene061724 | 0.856927 | 2.31E-62 | -1.69E-46 |
| MS.gene053207 | MS.gene061724 | 0.835044 | 2.11E-56 | -1.69E-46 |
| MS.gene053213 | MS.gene061724 | 0.893289 | 7.22E-75 | -1.69E-46 |
| MS.gene053286 | MS.gene061724 | 0.891697 | 3.13E-74 | -1.69E-46 |
| MS.gene053322 | MS.gene061724 | 0.831836 | 1.33E-55 | -1.69E-46 |
| MS.gene053436 | MS.gene061724 | 0.846734 | 1.80E-59 | -1.69E-46 |
| MS.gene053449 | MS.gene061724 | 0.833704 | 4.58E-56 | -1.69E-46 |
| MS.gene053574 | MS.gene061724 | 0.872137 | 4.01E-67 | -1.69E-46 |
| MS.gene053626 | MS.gene061724 | 0.806934 | 6.46E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene061724 | 0.828039 | 1.12E-54 | -1.69E-46 |
| MS.gene053813 | MS.gene061724 | 0.844746 | 6.25E-59 | -1.69E-46 |
| MS.gene053824 | MS.gene061724 | 0.821689 | 3.53E-53 | -1.69E-46 |
| MS.gene053916 | MS.gene061724 | 0.83707 | 6.46E-57 | -1.69E-46 |
| MS.gene054376 | MS.gene061724 | 0.82137 | 4.19E-53 | -1.69E-46 |
| MS.gene054408 | MS.gene061724 | 0.813665 | 2.28E-51 | -1.69E-46 |
| MS.gene054595 | MS.gene061724 | 0.835432 | 1.68E-56 | -1.69E-46 |
| MS.gene054600 | MS.gene061724 | 0.868047 | 8.73E-66 | -1.69E-46 |
| MS.gene054642 | MS.gene061724 | 0.868521 | 6.14E-66 | -1.69E-46 |
| MS.gene054802 | MS.gene061724 | 0.804934 | 1.70E-49 | -1.69E-46 |
| MS.gene054803 | MS.gene061724 | 0.802701 | 4.95E-49 | -1.69E-46 |
| MS.gene054804 | MS.gene061724 | 0.807231 | 5.59E-50 | -1.69E-46 |
| MS.gene054954 | MS.gene061724 | 0.851446 | 8.83E-61 | -1.69E-46 |
| MS.gene05505 | MS.gene061724 | 0.855473 | 6.16E-62 | -1.69E-46 |
| MS.gene055206 | MS.gene061724 | 0.803463 | 3.44E-49 | -1.69E-46 |
| MS.gene055212 | MS.gene061724 | 0.881906 | 1.63E-70 | -1.69E-46 |
| MS.gene055224 | MS.gene061724 | 0.821311 | 4.32E-53 | -1.69E-46 |
| MS.gene055362 | MS.gene061724 | 0.872639 | 2.73E-67 | -1.69E-46 |
| MS.gene055397 | MS.gene061724 | 0.816871 | 4.42E-52 | -1.69E-46 |
| MS.gene055499 | MS.gene061724 | 0.832967 | 6.99E-56 | -1.69E-46 |
| MS.gene055502 | MS.gene061724 | 0.854303 | 1.35E-61 | -1.69E-46 |
| MS.gene055577 | MS.gene061724 | 0.828912 | 6.90E-55 | -1.69E-46 |
| MS.gene055634 | MS.gene061724 | 0.814738 | 1.32E-51 | -1.69E-46 |
| MS.gene055636 | MS.gene061724 | 0.868127 | 8.22E-66 | -1.69E-46 |
| MS.gene055638 | MS.gene061724 | 0.8667 | 2.35E-65 | -1.69E-46 |
| MS.gene055647 | MS.gene061724 | 0.864528 | 1.14E-64 | -1.69E-46 |
| MS.gene055722 | MS.gene061724 | 0.880132 | 7.06E-70 | -1.69E-46 |
| MS.gene055750 | MS.gene061724 | 0.845844 | 3.15E-59 | -1.69E-46 |
| MS.gene055751 | MS.gene061724 | 0.811268 | 7.62E-51 | -1.69E-46 |
| MS.gene055776 | MS.gene061724 | 0.801047 | 1.08E-48 | -1.69E-46 |
| MS.gene055802 | MS.gene061724 | 0.81392 | 2.01E-51 | -1.69E-46 |
| MS.gene05592 | MS.gene061724 | 0.858646 | 7.14E-63 | -1.69E-46 |
| MS.gene055941 | MS.gene061724 | 0.852002 | 6.14E-61 | -1.69E-46 |
| MS.gene056374 | MS.gene061724 | 0.871317 | 7.50E-67 | -1.69E-46 |
| MS.gene056410 | MS.gene061724 | 0.810782 | 9.71E-51 | -1.69E-46 |
| MS.gene056422 | MS.gene061724 | 0.85205 | 5.95E-61 | -1.69E-46 |
| MS.gene056446 | MS.gene061724 | 0.800936 | 1.14E-48 | -1.69E-46 |
| MS.gene056448 | MS.gene061724 | 0.801507 | 8.72E-49 | -1.69E-46 |
| MS.gene056449 | MS.gene061724 | 0.81381 | 2.12E-51 | -1.69E-46 |
| MS.gene056487 | MS.gene061724 | 0.827404 | 1.59E-54 | -1.69E-46 |
| MS.gene056504 | MS.gene061724 | 0.853582 | 2.17E-61 | -1.69E-46 |
| MS.gene056510 | MS.gene061724 | 0.846021 | 2.82E-59 | -1.69E-46 |
| MS.gene056549 | MS.gene061724 | 0.835384 | 1.73E-56 | -1.69E-46 |
| MS.gene05664 | MS.gene061724 | 0.803999 | 2.67E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene061724 | 0.900478 | 7.04E-78 | -1.69E-46 |
| MS.gene056692 | MS.gene061724 | 0.803908 | 2.79E-49 | -1.69E-46 |
| MS.gene056942 | MS.gene061724 | 0.805784 | 1.13E-49 | -1.69E-46 |
| MS.gene056947 | MS.gene061724 | 0.810893 | 9.19E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene061724 | 0.82356 | 1.30E-53 | -1.69E-46 |
| MS.gene057086 | MS.gene061724 | 0.813142 | 2.97E-51 | -1.69E-46 |
| MS.gene057129 | MS.gene061724 | 0.844444 | 7.53E-59 | -1.69E-46 |
| MS.gene057331 | MS.gene061724 | 0.863881 | 1.81E-64 | -1.69E-46 |
| MS.gene057416 | MS.gene061724 | 0.860135 | 2.55E-63 | -1.69E-46 |
| MS.gene057734 | MS.gene061724 | 0.816559 | 5.20E-52 | -1.69E-46 |
| MS.gene057831 | MS.gene061724 | 0.818898 | 1.54E-52 | -1.69E-46 |
| MS.gene05787 | MS.gene061724 | 0.800734 | 1.25E-48 | -1.69E-46 |
| MS.gene057926 | MS.gene061724 | 0.867653 | 1.17E-65 | -1.69E-46 |
| MS.gene058019 | MS.gene061724 | 0.888052 | 8.31E-73 | -1.69E-46 |
| MS.gene058293 | MS.gene061724 | 0.822486 | 2.31E-53 | -1.69E-46 |
| MS.gene058323 | MS.gene061724 | 0.834016 | 3.82E-56 | -1.69E-46 |
| MS.gene05837 | MS.gene061724 | 0.810144 | 1.33E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene061724 | 0.868307 | 7.20E-66 | -1.69E-46 |
| MS.gene058459 | MS.gene061724 | 0.824337 | 8.52E-54 | -1.69E-46 |
| MS.gene058544 | MS.gene061724 | 0.800512 | 1.39E-48 | -1.69E-46 |
| MS.gene058723 | MS.gene061724 | 0.826085 | 3.29E-54 | -1.69E-46 |
| MS.gene058773 | MS.gene061724 | 0.847525 | 1.09E-59 | -1.69E-46 |
| MS.gene058838 | MS.gene061724 | 0.800391 | 1.47E-48 | -1.69E-46 |
| MS.gene059022 | MS.gene061724 | 0.849539 | 3.03E-60 | -1.69E-46 |
| MS.gene059023 | MS.gene061724 | 0.80259 | 5.22E-49 | -1.69E-46 |
| MS.gene059029 | MS.gene061724 | 0.822773 | 1.98E-53 | -1.69E-46 |
| MS.gene05913 | MS.gene061724 | 0.874404 | 6.94E-68 | -1.69E-46 |
| MS.gene059305 | MS.gene061724 | 0.809762 | 1.61E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene061724 | 0.835899 | 1.28E-56 | -1.69E-46 |
| MS.gene059367 | MS.gene061724 | 0.869705 | 2.53E-66 | -1.69E-46 |
| MS.gene059368 | MS.gene061724 | 0.839547 | 1.48E-57 | -1.69E-46 |
| MS.gene059455 | MS.gene061724 | 0.818657 | 1.75E-52 | -1.69E-46 |
| MS.gene059536 | MS.gene061724 | 0.837479 | 5.07E-57 | -1.69E-46 |
| MS.gene059674 | MS.gene061724 | 0.806305 | 8.77E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene061724 | 0.84603 | 2.81E-59 | -1.69E-46 |
| MS.gene059680 | MS.gene061724 | 0.828045 | 1.12E-54 | -1.69E-46 |
| MS.gene059711 | MS.gene061724 | 0.84002 | 1.12E-57 | -1.69E-46 |
| MS.gene059718 | MS.gene061724 | 0.855122 | 7.80E-62 | -1.69E-46 |
| MS.gene059756 | MS.gene061724 | 0.804774 | 1.84E-49 | -1.69E-46 |
| MS.gene059801 | MS.gene061724 | 0.844997 | 5.34E-59 | -1.69E-46 |
| MS.gene059865 | MS.gene061724 | 0.845918 | 3.01E-59 | -1.69E-46 |
| MS.gene059902 | MS.gene061724 | 0.811445 | 6.97E-51 | -1.69E-46 |
| MS.gene059960 | MS.gene061724 | 0.849036 | 4.18E-60 | -1.69E-46 |
| MS.gene060193 | MS.gene061724 | 0.881236 | 2.84E-70 | -1.69E-46 |
| MS.gene060356 | MS.gene061724 | 0.836943 | 6.96E-57 | -1.69E-46 |
| MS.gene060482 | MS.gene061724 | 0.864686 | 1.02E-64 | -1.69E-46 |
| MS.gene060703 | MS.gene061724 | 0.855433 | 6.33E-62 | -1.69E-46 |
| MS.gene060762 | MS.gene061724 | 0.827833 | 1.26E-54 | -1.69E-46 |
| MS.gene060778 | MS.gene061724 | 0.811049 | 8.50E-51 | -1.69E-46 |
| MS.gene06077 | MS.gene061724 | 0.834084 | 3.68E-56 | -1.69E-46 |
| MS.gene060804 | MS.gene061724 | 0.868343 | 7.00E-66 | -1.69E-46 |
| MS.gene060818 | MS.gene061724 | 0.80861 | 2.85E-50 | -1.69E-46 |
| MS.gene060835 | MS.gene061724 | 0.846652 | 1.90E-59 | -1.69E-46 |
| MS.gene060837 | MS.gene061724 | 0.841952 | 3.48E-58 | -1.69E-46 |
| MS.gene06092 | MS.gene061724 | 0.810299 | 1.23E-50 | -1.69E-46 |
| MS.gene06097 | MS.gene061724 | 0.845989 | 2.88E-59 | -1.69E-46 |
| MS.gene060982 | MS.gene061724 | 0.820912 | 5.34E-53 | -1.69E-46 |
| MS.gene061041 | MS.gene061724 | 0.86272 | 4.15E-64 | -1.69E-46 |
| MS.gene061134 | MS.gene061724 | 0.845302 | 4.42E-59 | -1.69E-46 |
| MS.gene061150 | MS.gene061724 | 0.823585 | 1.28E-53 | -1.69E-46 |
| MS.gene061171 | MS.gene061724 | 0.817231 | 3.67E-52 | -1.69E-46 |
| MS.gene061200 | MS.gene061724 | 0.892032 | 2.31E-74 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061724.t1 | MTR_5g087700 | 62.700 | 437 | 154 | 4 | 27 | 460 | 18 | 448 | 0.0 | 562 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061724.t1 | AT1G74470 | 82.581 | 465 | 77 | 2 | 2 | 462 | 3 | 467 | 0.0 | 769 |
Find 156 sgRNAs with CRISPR-Local
Find 208 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATATGCTATTGCATTTC+AGG | 0.142330 | 8.1:+16675069 | MS.gene061724:CDS |
| CGGCGGTGGGTGGTGGGTTT+GGG | 0.159392 | 8.1:-16674479 | None:intergenic |
| CTTCGTGGCCTTGGATGTTC+TGG | 0.162681 | 8.1:-16675922 | None:intergenic |
| AGGGGATTTGAGGAAATATT+TGG | 0.198675 | 8.1:+16676095 | MS.gene061724:CDS |
| AAGGAGAATTGAGTGGTTTC+TGG | 0.213209 | 8.1:-16674452 | None:intergenic |
| GCGGCGGTGGGTGGTGGGTT+TGG | 0.226167 | 8.1:-16674480 | None:intergenic |
| CTTCCTCATCGAACGTAAAA+TGG | 0.256761 | 8.1:+16674631 | MS.gene061724:CDS |
| TTGGCCTACTTATAAGGTTT+TGG | 0.265070 | 8.1:+16676137 | MS.gene061724:CDS |
| GACATATTGGCCTACTTATA+AGG | 0.266128 | 8.1:+16676131 | MS.gene061724:CDS |
| TGAGGAAATATTTGGAGAAA+TGG | 0.276745 | 8.1:+16676103 | MS.gene061724:CDS |
| CAGCAACATGGTCACATTTC+GGG | 0.283311 | 8.1:-16675780 | None:intergenic |
| TTGATGATTATCTTAGAAAT+AGG | 0.295715 | 8.1:+16674837 | MS.gene061724:CDS |
| TTGGAAGTTGATGCTGTTAT+TGG | 0.299811 | 8.1:+16674995 | MS.gene061724:CDS |
| GAATTTGCGGCGGTGGGTGG+TGG | 0.301327 | 8.1:-16674486 | None:intergenic |
| AGAAATAGGGCTAAGGAAAA+TGG | 0.307503 | 8.1:+16674851 | MS.gene061724:CDS |
| CCTGACAATCTTCGTGGCCT+TGG | 0.325683 | 8.1:-16675931 | None:intergenic |
| TTCTCCTGATTTCTATGGTT+GGG | 0.332471 | 8.1:+16675753 | MS.gene061724:CDS |
| ACAGCAACATGGTCACATTT+CGG | 0.342019 | 8.1:-16675781 | None:intergenic |
| TCTTCTTATGATGGGAAAAC+TGG | 0.344602 | 8.1:+16674950 | MS.gene061724:CDS |
| AGAGCCGAGGACAAGATCTT+TGG | 0.344834 | 8.1:+16675865 | MS.gene061724:CDS |
| CTTCATTATTCTTCTTATGA+TGG | 0.346960 | 8.1:+16674941 | MS.gene061724:CDS |
| TCTGCTGCTGCACCTCCAGC+TGG | 0.361031 | 8.1:-16674581 | None:intergenic |
| TGCGCACATCCTCCCACTCT+TGG | 0.361852 | 8.1:-16676025 | None:intergenic |
| GAGCCGAGGACAAGATCTTT+GGG | 0.362772 | 8.1:+16675866 | MS.gene061724:CDS |
| ACACCATAGGGAGCTTGGTT+AGG | 0.364847 | 8.1:+16676316 | MS.gene061724:CDS |
| GAGGAAATATTTGGAGAAAT+GGG | 0.367293 | 8.1:+16676104 | MS.gene061724:CDS |
| TGATGATTATCTTAGAAATA+GGG | 0.374290 | 8.1:+16674838 | MS.gene061724:CDS |
| GATTCCTTCTCCGGAACATT+TGG | 0.376897 | 8.1:-16675992 | None:intergenic |
| GACGTTTCTCCTGATTTCTA+TGG | 0.377409 | 8.1:+16675748 | MS.gene061724:CDS |
| GTCAGGGAGGGTCGCGCTTG+TGG | 0.383632 | 8.1:+16675948 | MS.gene061724:CDS |
| CGACGGTGAATTTGCGGCGG+TGG | 0.386503 | 8.1:-16674493 | None:intergenic |
| GCGCTTGTGGGTGATGCTGC+TGG | 0.386839 | 8.1:+16675961 | MS.gene061724:CDS |
| TCAGGGAGGGTCGCGCTTGT+GGG | 0.399661 | 8.1:+16675949 | MS.gene061724:CDS |
| GGCGGTGGGTGGTGGGTTTG+GGG | 0.400190 | 8.1:-16674478 | None:intergenic |
| CTTAAGTCTCATGAGTATAT+TGG | 0.401506 | 8.1:+16674794 | MS.gene061724:CDS |
| CCAAGGCCACGAAGATTGTC+AGG | 0.407730 | 8.1:+16675931 | MS.gene061724:CDS |
| TGGTTAGGGCTAATGCTCTA+AGG | 0.419103 | 8.1:+16676331 | MS.gene061724:CDS |
| AGAGGCAATTGTGCAGGGTT+CGG | 0.420268 | 8.1:+16676047 | MS.gene061724:CDS |
| GTCATCGGCGGTGGTCCAGC+TGG | 0.420381 | 8.1:+16674566 | MS.gene061724:CDS |
| TCAACAAAAGCTTCCCTAGC+AGG | 0.436433 | 8.1:-16676192 | None:intergenic |
| AATTTGCGGCGGTGGGTGGT+GGG | 0.438343 | 8.1:-16674485 | None:intergenic |
| TTCATTATTCTTCTTATGAT+GGG | 0.438606 | 8.1:+16674942 | MS.gene061724:CDS |
| CTGTACAAGACTGTTGTGCC+TGG | 0.441769 | 8.1:+16676261 | MS.gene061724:CDS |
| GAAGAATAATGAAGAACATA+AGG | 0.446087 | 8.1:-16674932 | None:intergenic |
| GGCCTTGGATGTTCTGGGAT+AGG | 0.448676 | 8.1:-16675916 | None:intergenic |
| GGCTACGTGACCAAATGTTC+CGG | 0.451819 | 8.1:+16675982 | MS.gene061724:CDS |
| AAAAGCTTCCCTAGCAGGAT+TGG | 0.453043 | 8.1:-16676187 | None:intergenic |
| TGGTTGAAGAAGGGGATTTG+AGG | 0.453345 | 8.1:+16676085 | MS.gene061724:CDS |
| CACCATAGGGAGCTTGGTTA+GGG | 0.453641 | 8.1:+16676317 | MS.gene061724:CDS |
| TTCGTGGCCTTGGATGTTCT+GGG | 0.456103 | 8.1:-16675921 | None:intergenic |
| GGGAAGAGGATGGTTGAAGA+AGG | 0.458022 | 8.1:+16676075 | MS.gene061724:CDS |
| GATGGGAAAACTGGTGGGGT+TGG | 0.460324 | 8.1:+16674959 | MS.gene061724:CDS |
| GGAAGAGGATGGTTGAAGAA+GGG | 0.461222 | 8.1:+16676076 | MS.gene061724:CDS |
| GGTGGTGGGTTTGGGGCGGA+AGG | 0.462752 | 8.1:-16674471 | None:intergenic |
| GCCTTGGATGTTCTGGGATA+GGG | 0.465690 | 8.1:-16675915 | None:intergenic |
| AACCTCCGTGTCGCTGTCAT+CGG | 0.466562 | 8.1:+16674551 | MS.gene061724:CDS |
| AGAAATGGGACAAGACATAT+TGG | 0.468367 | 8.1:+16676118 | MS.gene061724:CDS |
| TTTCTCCTGATTTCTATGGT+TGG | 0.468942 | 8.1:+16675752 | MS.gene061724:CDS |
| CGGAGAAATCATCTTCATCT+TGG | 0.469756 | 8.1:-16674741 | None:intergenic |
| AATGGAGCGAATATTATCAA+TGG | 0.469785 | 8.1:+16674869 | MS.gene061724:CDS |
| GACCATGTTGCTGTCGGCAC+TGG | 0.473506 | 8.1:+16675790 | MS.gene061724:CDS |
| CGGCAACGACGGTGAATTTG+CGG | 0.479555 | 8.1:-16674499 | None:intergenic |
| AATACCCAACCATAGAAATC+AGG | 0.480281 | 8.1:-16675757 | None:intergenic |
| TTGTGCAGGGTTCGGCGAAT+GGG | 0.480844 | 8.1:+16676055 | MS.gene061724:CDS |
| GGTGGGTGGTGGGTTTGGGG+CGG | 0.481581 | 8.1:-16674475 | None:intergenic |
| TGCAAAATAGATTCCTTCTC+CGG | 0.483867 | 8.1:-16676001 | None:intergenic |
| GGAGGCCGAGGAAGGATTTG+AGG | 0.485174 | 8.1:-16674418 | None:intergenic |
| GTGCGCAGAGGCAATTGTGC+AGG | 0.486232 | 8.1:+16676041 | MS.gene061724:CDS |
| TGACAGCGACACGGAGGTTA+CGG | 0.488882 | 8.1:-16674547 | None:intergenic |
| ATTGTGCAGGGTTCGGCGAA+TGG | 0.489244 | 8.1:+16676054 | MS.gene061724:CDS |
| ACCCTCCCTGACAATCTTCG+TGG | 0.495621 | 8.1:-16675937 | None:intergenic |
| GTGAGGAAATGCGGAGGCCG+AGG | 0.498992 | 8.1:-16674430 | None:intergenic |
| GAAGAGGATGGTTGAAGAAG+GGG | 0.499187 | 8.1:+16676077 | MS.gene061724:CDS |
| TGATAAAATGGCTTATTATG+AGG | 0.503572 | 8.1:+16675699 | MS.gene061724:CDS |
| GCCATTCCTCTCTGCATGGT+TGG | 0.506344 | 8.1:+16674677 | MS.gene061724:CDS |
| TCGAATGTCGCCGTCGACAT+TGG | 0.508885 | 8.1:+16674764 | MS.gene061724:CDS |
| ATGGAGCGAATATTATCAAT+GGG | 0.512254 | 8.1:+16674870 | MS.gene061724:CDS |
| GGTGAATTTGCGGCGGTGGG+TGG | 0.515466 | 8.1:-16674489 | None:intergenic |
| TATCAACACCATAGGGAGCT+TGG | 0.521041 | 8.1:+16676311 | MS.gene061724:CDS |
| CGTGTCGCTGTCATCGGCGG+TGG | 0.524419 | 8.1:+16674557 | MS.gene061724:CDS |
| GAGGCCGAGGAAGGATTTGA+GGG | 0.525450 | 8.1:-16674417 | None:intergenic |
| TGTTGTGCCTGGGAGTCCAT+TGG | 0.531085 | 8.1:+16676272 | MS.gene061724:CDS |
| GATGCTGTTATTGGTGCTGA+TGG | 0.532399 | 8.1:+16675004 | MS.gene061724:CDS |
| AGCCCTAACCAAGCTCCCTA+TGG | 0.537896 | 8.1:-16676319 | None:intergenic |
| AAGTTGGCTATCAACACCAT+AGG | 0.539875 | 8.1:+16676303 | MS.gene061724:CDS |
| CTTATGATGGGAAAACTGGT+GGG | 0.540873 | 8.1:+16674954 | MS.gene061724:CDS |
| GCAGCAGAAACACTAGCAAA+AGG | 0.541139 | 8.1:+16674596 | MS.gene061724:CDS |
| TTTACAGGTCCAATCCTGCT+AGG | 0.541349 | 8.1:+16676178 | MS.gene061724:CDS |
| CTCCGTGTCGCTGTCATCGG+CGG | 0.543928 | 8.1:+16674554 | MS.gene061724:CDS |
| ATATCCTCCAATGGACTCCC+AGG | 0.545006 | 8.1:-16676279 | None:intergenic |
| TCTTATGATGGGAAAACTGG+TGG | 0.545852 | 8.1:+16674953 | MS.gene061724:CDS |
| ATATCCAAAACCTTATAAGT+AGG | 0.547753 | 8.1:-16676141 | None:intergenic |
| GGCTTATTATGAGGATCTTG+CGG | 0.547968 | 8.1:+16675708 | MS.gene061724:CDS |
| GTCTCATGAGTATATTGGTA+TGG | 0.549402 | 8.1:+16674799 | MS.gene061724:CDS |
| GTGACCAAATGTTCCGGAGA+AGG | 0.556989 | 8.1:+16675988 | MS.gene061724:CDS |
| CACTGGAACTGTGACACACA+AGG | 0.561378 | 8.1:+16675807 | MS.gene061724:CDS |
| TTACAGGTCCAATCCTGCTA+GGG | 0.562987 | 8.1:+16676179 | MS.gene061724:CDS |
| AGGGTTCGGCGAATGGGAAG+AGG | 0.563143 | 8.1:+16676061 | MS.gene061724:CDS |
| TTTGAGGGCAATGGAGCTCA+TGG | 0.565078 | 8.1:-16674402 | None:intergenic |
| AGGAGCCATTCCTCTCTGCA+TGG | 0.568282 | 8.1:+16674673 | MS.gene061724:CDS |
| GACGGTGAATTTGCGGCGGT+GGG | 0.568358 | 8.1:-16674492 | None:intergenic |
| GAGGAAGGATTTGAGGGCAA+TGG | 0.569467 | 8.1:-16674411 | None:intergenic |
| CGGCGGTCTATGATGTCTAG+TGG | 0.569593 | 8.1:-16674713 | None:intergenic |
| TGTGCCTGGGAGTCCATTGG+AGG | 0.571542 | 8.1:+16676275 | MS.gene061724:CDS |
| TCCATTGGAGGATATCAAGT+TGG | 0.576911 | 8.1:+16676287 | MS.gene061724:CDS |
| GTTGCTAAGTCTATTGATGC+TGG | 0.578907 | 8.1:+16675040 | MS.gene061724:CDS |
| ATGTCGCCGTCGACATTGGT+AGG | 0.579219 | 8.1:+16674768 | MS.gene061724:CDS |
| ATGTCGACGGCGACATTCGA+CGG | 0.582173 | 8.1:-16674761 | None:intergenic |
| ATCGGCGGTGGTCCAGCTGG+AGG | 0.583092 | 8.1:+16674569 | MS.gene061724:CDS |
| GAATTGAGTGGTTTCTGGTG+AGG | 0.584913 | 8.1:-16674447 | None:intergenic |
| ATTGCCCTCAAATCCTTCCT+CGG | 0.585608 | 8.1:+16674413 | MS.gene061724:CDS |
| GCTGGTTGCTGCGGCAACGA+CGG | 0.585712 | 8.1:-16674510 | None:intergenic |
| ACCCTATCCCAGAACATCCA+AGG | 0.590122 | 8.1:+16675914 | MS.gene061724:CDS |
| GCCACGAAGATTGTCAGGGA+GGG | 0.591898 | 8.1:+16675936 | MS.gene061724:CDS |
| GGGGCGGAAGGAGAATTGAG+TGG | 0.593658 | 8.1:-16674459 | None:intergenic |
| TTATCTTAGAAATAGGGCTA+AGG | 0.596386 | 8.1:+16674844 | MS.gene061724:CDS |
| GGAAATGCGGAGGCCGAGGA+AGG | 0.607962 | 8.1:-16674426 | None:intergenic |
| TTATGATGGGAAAACTGGTG+GGG | 0.607967 | 8.1:+16674955 | MS.gene061724:CDS |
| TGTACAAGACTGTTGTGCCT+GGG | 0.612477 | 8.1:+16676262 | MS.gene061724:CDS |
| TTAGGGCTAATGCTCTAAGG+AGG | 0.617977 | 8.1:+16676334 | MS.gene061724:CDS |
| TGCGCAGAGGCAATTGTGCA+GGG | 0.620081 | 8.1:+16676042 | MS.gene061724:CDS |
| GCCAACTTGATATCCTCCAA+TGG | 0.620794 | 8.1:-16676288 | None:intergenic |
| CACCGCCGATGACAGCGACA+CGG | 0.621764 | 8.1:-16674556 | None:intergenic |
| ACCAACCATGCAGAGAGGAA+TGG | 0.622279 | 8.1:-16674678 | None:intergenic |
| AGAGGAATGGCTCCTCCACA+TGG | 0.622376 | 8.1:-16674665 | None:intergenic |
| AGTTGGCTATCAACACCATA+GGG | 0.624989 | 8.1:+16676304 | MS.gene061724:CDS |
| TTCGGCGAATGGGAAGAGGA+TGG | 0.627116 | 8.1:+16676065 | MS.gene061724:CDS |
| TAATGCTCTAAGGAGGGAGA+TGG | 0.631923 | 8.1:+16676341 | MS.gene061724:CDS |
| TAGGGCTAATGCTCTAAGGA+GGG | 0.641569 | 8.1:+16676335 | MS.gene061724:CDS |
| GGATCTTGCGGAGATGTACG+TGG | 0.643983 | 8.1:+16675720 | MS.gene061724:CDS |
| TCATCTTCATCTTGGTAACA+CGG | 0.646038 | 8.1:-16674733 | None:intergenic |
| AGAAGTTCCAACTAGCAACA+AGG | 0.653441 | 8.1:+16675839 | MS.gene061724:CDS |
| TGGTTTCTGGTGAGGAAATG+CGG | 0.653993 | 8.1:-16674439 | None:intergenic |
| ATGAGTATATTGGTATGGTG+AGG | 0.657171 | 8.1:+16674804 | MS.gene061724:CDS |
| TTCCAGTGCCGACAGCAACA+TGG | 0.659892 | 8.1:-16675792 | None:intergenic |
| AGCCGAGGACAAGATCTTTG+GGG | 0.662521 | 8.1:+16675867 | MS.gene061724:CDS |
| GACAACTGCAAACCATGTGG+AGG | 0.664445 | 8.1:+16674653 | MS.gene061724:CDS |
| GGCCACGAAGATTGTCAGGG+AGG | 0.664448 | 8.1:+16675935 | MS.gene061724:CDS |
| CAACGACGGTGAATTTGCGG+CGG | 0.665671 | 8.1:-16674496 | None:intergenic |
| AGCAACAAGGAAAAGAGCCG+AGG | 0.665901 | 8.1:+16675852 | MS.gene061724:CDS |
| GCAGAAACACTAGCAAAAGG+TGG | 0.669744 | 8.1:+16674599 | MS.gene061724:CDS |
| AAATGTGACCATGTTGCTGT+CGG | 0.670974 | 8.1:+16675784 | MS.gene061724:CDS |
| CAAGGCCACGAAGATTGTCA+GGG | 0.673953 | 8.1:+16675932 | MS.gene061724:CDS |
| ACTGGAACTGTGACACACAA+GGG | 0.674007 | 8.1:+16675808 | MS.gene061724:CDS |
| AAGTGTCCTACCAATGTCGA+CGG | 0.676648 | 8.1:-16674774 | None:intergenic |
| GCCGAGGACAAGATCTTTGG+GGG | 0.677774 | 8.1:+16675868 | MS.gene061724:CDS |
| GGGCAAGATTATCCGCGTGG+AGG | 0.678096 | 8.1:+16675888 | MS.gene061724:CDS |
| GAGTGGGAGGATGTGCGCAG+AGG | 0.683072 | 8.1:+16676029 | MS.gene061724:CDS |
| ATGGACAACTGCAAACCATG+TGG | 0.691065 | 8.1:+16674650 | MS.gene061724:CDS |
| TATTGGTATGGTGAGGCGTG+AGG | 0.696798 | 8.1:+16674811 | MS.gene061724:CDS |
| AACTCACCAACCATGCAGAG+AGG | 0.710797 | 8.1:-16674683 | None:intergenic |
| GATCTTGCGGAGATGTACGT+GGG | 0.713124 | 8.1:+16675721 | MS.gene061724:CDS |
| CGCCGATGACAGCGACACGG+AGG | 0.724003 | 8.1:-16674553 | None:intergenic |
| TTTCTGGTGAGGAAATGCGG+AGG | 0.741612 | 8.1:-16674436 | None:intergenic |
| GGATAGGGTGAGCCTCCACG+CGG | 0.765358 | 8.1:-16675900 | None:intergenic |
| TCTTCATCTTGGTAACACGG+CGG | 0.788727 | 8.1:-16674730 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGTAAGATGTAACAATT+TGG | + | chr8.1:16675230-16675249 | MS.gene061724:intron | 20.0% |
| !! | CAAATTAATCTTGAAATAGT+AGG | - | chr8.1:16675546-16675565 | None:intergenic | 20.0% |
| !! | CTACTATTTCAAGATTAATT+TGG | + | chr8.1:16675544-16675563 | MS.gene061724:intron | 20.0% |
| !! | TGATGATTATCTTAGAAATA+GGG | + | chr8.1:16674838-16674857 | MS.gene061724:CDS | 20.0% |
| !! | TTCATTATTCTTCTTATGAT+GGG | + | chr8.1:16674942-16674961 | MS.gene061724:CDS | 20.0% |
| !!! | ACAATTTGGTCTTAAAATTA+AGG | + | chr8.1:16675244-16675263 | MS.gene061724:intron | 20.0% |
| !!! | CAATTTGGTCTTAAAATTAA+GGG | + | chr8.1:16675245-16675264 | MS.gene061724:intron | 20.0% |
| !!! | TCACATTAGTGTTAATATTT+TGG | + | chr8.1:16675288-16675307 | MS.gene061724:intron | 20.0% |
| !!! | TTATGGTTTCTATTTTTGAA+AGG | + | chr8.1:16675605-16675624 | MS.gene061724:intron | 20.0% |
| !!! | TTATGTGAATTAGCAATTTT+TGG | + | chr8.1:16675132-16675151 | MS.gene061724:intron | 20.0% |
| !!! | TTGATGATTATCTTAGAAAT+AGG | + | chr8.1:16674837-16674856 | MS.gene061724:CDS | 20.0% |
| ! | AAAAATCCCAGATGATAAAA+TGG | + | chr8.1:16675687-16675706 | MS.gene061724:CDS | 25.0% |
| ! | ATATCCAAAACCTTATAAGT+AGG | - | chr8.1:16676144-16676163 | None:intergenic | 25.0% |
| ! | ATATGAAACCTTCCTAAATA+CGG | - | chr8.1:16675351-16675370 | None:intergenic | 25.0% |
| ! | CTTCATTATTCTTCTTATGA+TGG | + | chr8.1:16674941-16674960 | MS.gene061724:CDS | 25.0% |
| ! | GAAGAATAATGAAGAACATA+AGG | - | chr8.1:16674935-16674954 | None:intergenic | 25.0% |
| ! | TGATAAAATGGCTTATTATG+AGG | + | chr8.1:16675699-16675718 | MS.gene061724:CDS | 25.0% |
| !! | ATAGTATGGTTAATTTTCTC+AGG | + | chr8.1:16675657-16675676 | MS.gene061724:intron | 25.0% |
| !! | ATCAAGTATTGTTCAATTCA+AGG | - | chr8.1:16675452-16675471 | None:intergenic | 25.0% |
| !! | TCAAGTATTGTTCAATTCAA+GGG | - | chr8.1:16675451-16675470 | None:intergenic | 25.0% |
| !!! | AATAAGCCATTTTATCATCT+GGG | - | chr8.1:16675696-16675715 | None:intergenic | 25.0% |
| !!! | CATGTTTCATTTTGATAGTA+TGG | + | chr8.1:16675643-16675662 | MS.gene061724:intron | 25.0% |
| !!! | TAATAAGCCATTTTATCATC+TGG | - | chr8.1:16675697-16675716 | None:intergenic | 25.0% |
| AATAGTAGGATTAGACAACT+TGG | - | chr8.1:16675532-16675551 | None:intergenic | 30.0% | |
| AATGGAGCGAATATTATCAA+TGG | + | chr8.1:16674869-16674888 | MS.gene061724:CDS | 30.0% | |
| AGGGTAAATACTCTATAACA+TGG | + | chr8.1:16675264-16675283 | MS.gene061724:intron | 30.0% | |
| ATGGAGCGAATATTATCAAT+GGG | + | chr8.1:16674870-16674889 | MS.gene061724:CDS | 30.0% | |
| CTTAAGTCTCATGAGTATAT+TGG | + | chr8.1:16674794-16674813 | MS.gene061724:CDS | 30.0% | |
| GAGGAAATATTTGGAGAAAT+GGG | + | chr8.1:16676104-16676123 | MS.gene061724:CDS | 30.0% | |
| TGAATATGCTATTGCATTTC+AGG | + | chr8.1:16675069-16675088 | MS.gene061724:CDS | 30.0% | |
| TGAGGAAATATTTGGAGAAA+TGG | + | chr8.1:16676103-16676122 | MS.gene061724:CDS | 30.0% | |
| TTATCTTAGAAATAGGGCTA+AGG | + | chr8.1:16674844-16674863 | MS.gene061724:CDS | 30.0% | |
| ! | TAGTTCATTGTGGTGTTTTA+TGG | + | chr8.1:16675588-16675607 | MS.gene061724:intron | 30.0% |
| ! | TGAGTTTGAAATCCGTATTT+AGG | + | chr8.1:16675336-16675355 | MS.gene061724:intron | 30.0% |
| ! | TTTGAAATCCGTATTTAGGA+AGG | + | chr8.1:16675340-16675359 | MS.gene061724:intron | 30.0% |
| !!! | CAATGGGTTGTTTTTGAAAA+TGG | + | chr8.1:16674886-16674905 | MS.gene061724:CDS | 30.0% |
| AATACCCAACCATAGAAATC+AGG | - | chr8.1:16675760-16675779 | None:intergenic | 35.0% | |
| AATGAGACCGATGACAAAAT+TGG | - | chr8.1:16675496-16675515 | None:intergenic | 35.0% | |
| ACAAAATTGGCATGCACAAA+AGG | - | chr8.1:16675483-16675502 | None:intergenic | 35.0% | |
| AGAAATAGGGCTAAGGAAAA+TGG | + | chr8.1:16674851-16674870 | MS.gene061724:CDS | 35.0% | |
| AGAAATGGGACAAGACATAT+TGG | + | chr8.1:16676118-16676137 | MS.gene061724:CDS | 35.0% | |
| AGGGGATTTGAGGAAATATT+TGG | + | chr8.1:16676095-16676114 | MS.gene061724:CDS | 35.0% | |
| ATGAGTATATTGGTATGGTG+AGG | + | chr8.1:16674804-16674823 | MS.gene061724:CDS | 35.0% | |
| ATGTCAACCGAGTCTTTAAT+CGG | + | chr8.1:16675161-16675180 | MS.gene061724:intron | 35.0% | |
| CGGTCTCATTTACTCATTTA+GGG | + | chr8.1:16675506-16675525 | MS.gene061724:intron | 35.0% | |
| GACTAAGATGTAGTTCATTG+TGG | + | chr8.1:16675578-16675597 | MS.gene061724:intron | 35.0% | |
| GTCTCATGAGTATATTGGTA+TGG | + | chr8.1:16674799-16674818 | MS.gene061724:CDS | 35.0% | |
| TCGGTCTCATTTACTCATTT+AGG | + | chr8.1:16675505-16675524 | MS.gene061724:intron | 35.0% | |
| TGCAAAATAGATTCCTTCTC+CGG | - | chr8.1:16676004-16676023 | None:intergenic | 35.0% | |
| TTCTCCTGATTTCTATGGTT+GGG | + | chr8.1:16675753-16675772 | MS.gene061724:CDS | 35.0% | |
| TTTCTCCTGATTTCTATGGT+TGG | + | chr8.1:16675752-16675771 | MS.gene061724:CDS | 35.0% | |
| ! | ATGGTTAATTTTCTCAGGAG+AGG | + | chr8.1:16675662-16675681 | MS.gene061724:intron | 35.0% |
| ! | GACATATTGGCCTACTTATA+AGG | + | chr8.1:16676131-16676150 | MS.gene061724:CDS | 35.0% |
| ! | TCATCTTCATCTTGGTAACA+CGG | - | chr8.1:16674736-16674755 | None:intergenic | 35.0% |
| ! | TCTTCTTATGATGGGAAAAC+TGG | + | chr8.1:16674950-16674969 | MS.gene061724:CDS | 35.0% |
| ! | TTGGCCTACTTATAAGGTTT+TGG | + | chr8.1:16676137-16676156 | MS.gene061724:CDS | 35.0% |
| !! | AATTTAGTCTTGTCTTGTGC+AGG | + | chr8.1:16675390-16675409 | MS.gene061724:intron | 35.0% |
| !! | ATTTAGTCTTGTCTTGTGCA+GGG | + | chr8.1:16675391-16675410 | MS.gene061724:intron | 35.0% |
| !! | GGTTGGTGAAAAAACTACTT+TGG | + | chr8.1:16674976-16674995 | MS.gene061724:CDS | 35.0% |
| !! | TAAGGCGCATTCTTTTGTTT+AGG | - | chr8.1:16674917-16674936 | None:intergenic | 35.0% |
| !! | TTGGAAGTTGATGCTGTTAT+TGG | + | chr8.1:16674995-16675014 | MS.gene061724:CDS | 35.0% |
| !!! | GGTTTTGGATATTCTTCAGA+AGG | + | chr8.1:16676152-16676171 | MS.gene061724:CDS | 35.0% |
| !!! | TTCTTCAGAAGGTGTTTTAC+AGG | + | chr8.1:16676163-16676182 | MS.gene061724:CDS | 35.0% |
| AAATGTGACCATGTTGCTGT+CGG | + | chr8.1:16675784-16675803 | MS.gene061724:CDS | 40.0% | |
| AAGGAGAATTGAGTGGTTTC+TGG | - | chr8.1:16674455-16674474 | None:intergenic | 40.0% | |
| AAGTTGGCTATCAACACCAT+AGG | + | chr8.1:16676303-16676322 | MS.gene061724:CDS | 40.0% | |
| ACAGCAACATGGTCACATTT+CGG | - | chr8.1:16675784-16675803 | None:intergenic | 40.0% | |
| AGAAGTTCCAACTAGCAACA+AGG | + | chr8.1:16675839-16675858 | MS.gene061724:CDS | 40.0% | |
| AGTTGGCTATCAACACCATA+GGG | + | chr8.1:16676304-16676323 | MS.gene061724:CDS | 40.0% | |
| CGGAGAAATCATCTTCATCT+TGG | - | chr8.1:16674744-16674763 | None:intergenic | 40.0% | |
| CTAGAACCCGATTAAAGACT+CGG | - | chr8.1:16675171-16675190 | None:intergenic | 40.0% | |
| CTTCCTCATCGAACGTAAAA+TGG | + | chr8.1:16674631-16674650 | MS.gene061724:CDS | 40.0% | |
| GACGTTTCTCCTGATTTCTA+TGG | + | chr8.1:16675748-16675767 | MS.gene061724:CDS | 40.0% | |
| GGCTTATTATGAGGATCTTG+CGG | + | chr8.1:16675708-16675727 | MS.gene061724:CDS | 40.0% | |
| GTTGCTAAGTCTATTGATGC+TGG | + | chr8.1:16675040-16675059 | MS.gene061724:CDS | 40.0% | |
| TCCATTGGAGGATATCAAGT+TGG | + | chr8.1:16676287-16676306 | MS.gene061724:CDS | 40.0% | |
| TGTCAACCGAGTCTTTAATC+GGG | + | chr8.1:16675162-16675181 | MS.gene061724:intron | 40.0% | |
| ! | ATCTATTTTGCAGCCAAGAG+TGG | + | chr8.1:16676012-16676031 | MS.gene061724:CDS | 40.0% |
| ! | CATTTTACGTTCGATGAGGA+AGG | - | chr8.1:16674633-16674652 | None:intergenic | 40.0% |
| ! | CTCTTTTCCTTGTTGCTAGT+TGG | - | chr8.1:16675849-16675868 | None:intergenic | 40.0% |
| ! | CTTATGATGGGAAAACTGGT+GGG | + | chr8.1:16674954-16674973 | MS.gene061724:CDS | 40.0% |
| ! | GTGCATGCCAATTTTGTCAT+CGG | + | chr8.1:16675486-16675505 | MS.gene061724:intron | 40.0% |
| ! | TCTATTTTGCAGCCAAGAGT+GGG | + | chr8.1:16676013-16676032 | MS.gene061724:CDS | 40.0% |
| ! | TCTTATGATGGGAAAACTGG+TGG | + | chr8.1:16674953-16674972 | MS.gene061724:CDS | 40.0% |
| ! | TGTCCATTTTACGTTCGATG+AGG | - | chr8.1:16674637-16674656 | None:intergenic | 40.0% |
| ! | TTATGATGGGAAAACTGGTG+GGG | + | chr8.1:16674955-16674974 | MS.gene061724:CDS | 40.0% |
| AAAAGCTTCCCTAGCAGGAT+TGG | - | chr8.1:16676190-16676209 | None:intergenic | 45.0% | |
| AAGTGTCCTACCAATGTCGA+CGG | - | chr8.1:16674777-16674796 | None:intergenic | 45.0% | |
| ACTGGAACTGTGACACACAA+GGG | + | chr8.1:16675808-16675827 | MS.gene061724:CDS | 45.0% | |
| ATGGACAACTGCAAACCATG+TGG | + | chr8.1:16674650-16674669 | MS.gene061724:CDS | 45.0% | |
| ATTGCCCTCAAATCCTTCCT+CGG | + | chr8.1:16674413-16674432 | MS.gene061724:CDS | 45.0% | |
| CAGCAACATGGTCACATTTC+GGG | - | chr8.1:16675783-16675802 | None:intergenic | 45.0% | |
| CGAGTCTTTAATCGGGTTCT+AGG | + | chr8.1:16675169-16675188 | MS.gene061724:intron | 45.0% | |
| GAAGAGGATGGTTGAAGAAG+GGG | + | chr8.1:16676077-16676096 | MS.gene061724:CDS | 45.0% | |
| GATTCCTTCTCCGGAACATT+TGG | - | chr8.1:16675995-16676014 | None:intergenic | 45.0% | |
| GCAGAAACACTAGCAAAAGG+TGG | + | chr8.1:16674599-16674618 | MS.gene061724:CDS | 45.0% | |
| GCAGCAGAAACACTAGCAAA+AGG | + | chr8.1:16674596-16674615 | MS.gene061724:CDS | 45.0% | |
| GCCAACTTGATATCCTCCAA+TGG | - | chr8.1:16676291-16676310 | None:intergenic | 45.0% | |
| GGAAGAGGATGGTTGAAGAA+GGG | + | chr8.1:16676076-16676095 | MS.gene061724:CDS | 45.0% | |
| TATCAACACCATAGGGAGCT+TGG | + | chr8.1:16676311-16676330 | MS.gene061724:CDS | 45.0% | |
| TCAACAAAAGCTTCCCTAGC+AGG | - | chr8.1:16676195-16676214 | None:intergenic | 45.0% | |
| TGGTTAGGGCTAATGCTCTA+AGG | + | chr8.1:16676331-16676350 | MS.gene061724:CDS | 45.0% | |
| TGGTTGAAGAAGGGGATTTG+AGG | + | chr8.1:16676085-16676104 | MS.gene061724:CDS | 45.0% | |
| TGTACAAGACTGTTGTGCCT+GGG | + | chr8.1:16676262-16676281 | MS.gene061724:CDS | 45.0% | |
| TTACAGGTCCAATCCTGCTA+GGG | + | chr8.1:16676179-16676198 | MS.gene061724:CDS | 45.0% | |
| TTTACAGGTCCAATCCTGCT+AGG | + | chr8.1:16676178-16676197 | MS.gene061724:CDS | 45.0% | |
| ! | TCTTCATCTTGGTAACACGG+CGG | - | chr8.1:16674733-16674752 | None:intergenic | 45.0% |
| !! | GAATTGAGTGGTTTCTGGTG+AGG | - | chr8.1:16674450-16674469 | None:intergenic | 45.0% |
| !! | GATGCTGTTATTGGTGCTGA+TGG | + | chr8.1:16675004-16675023 | MS.gene061724:CDS | 45.0% |
| !! | TAATGCTCTAAGGAGGGAGA+TGG | + | chr8.1:16676341-16676360 | MS.gene061724:CDS | 45.0% |
| !! | TAGGGCTAATGCTCTAAGGA+GGG | + | chr8.1:16676335-16676354 | MS.gene061724:CDS | 45.0% |
| !! | TGGTTTCTGGTGAGGAAATG+CGG | - | chr8.1:16674442-16674461 | None:intergenic | 45.0% |
| !! | TTAGGGCTAATGCTCTAAGG+AGG | + | chr8.1:16676334-16676353 | MS.gene061724:CDS | 45.0% |
| !!! | AGGTTACGGCCATCGATTTT+TGG | - | chr8.1:16674536-16674555 | None:intergenic | 45.0% |
| !!! | GGTTACGGCCATCGATTTTT+GGG | - | chr8.1:16674535-16674554 | None:intergenic | 45.0% |
| !!! | TTACAATTTTAAAATTAAAT+CGG | - | chr8.1:16675218-16675237 | None:intergenic | 5.0% |
| AACTCACCAACCATGCAGAG+AGG | - | chr8.1:16674686-16674705 | None:intergenic | 50.0% | |
| ACACCATAGGGAGCTTGGTT+AGG | + | chr8.1:16676316-16676335 | MS.gene061724:CDS | 50.0% | |
| ACCAACCATGCAGAGAGGAA+TGG | - | chr8.1:16674681-16674700 | None:intergenic | 50.0% | |
| ACCCTATCCCAGAACATCCA+AGG | + | chr8.1:16675914-16675933 | MS.gene061724:CDS | 50.0% | |
| AGAGCCGAGGACAAGATCTT+TGG | + | chr8.1:16675865-16675884 | MS.gene061724:CDS | 50.0% | |
| AGAGGCAATTGTGCAGGGTT+CGG | + | chr8.1:16676047-16676066 | MS.gene061724:CDS | 50.0% | |
| AGCAACAAGGAAAAGAGCCG+AGG | + | chr8.1:16675852-16675871 | MS.gene061724:CDS | 50.0% | |
| AGCCGAGGACAAGATCTTTG+GGG | + | chr8.1:16675867-16675886 | MS.gene061724:CDS | 50.0% | |
| CAAGGCCACGAAGATTGTCA+GGG | + | chr8.1:16675932-16675951 | MS.gene061724:CDS | 50.0% | |
| CACCATAGGGAGCTTGGTTA+GGG | + | chr8.1:16676317-16676336 | MS.gene061724:CDS | 50.0% | |
| CACTGGAACTGTGACACACA+AGG | + | chr8.1:16675807-16675826 | MS.gene061724:CDS | 50.0% | |
| CTGTACAAGACTGTTGTGCC+TGG | + | chr8.1:16676261-16676280 | MS.gene061724:CDS | 50.0% | |
| GACAACTGCAAACCATGTGG+AGG | + | chr8.1:16674653-16674672 | MS.gene061724:CDS | 50.0% | |
| GAGCCGAGGACAAGATCTTT+GGG | + | chr8.1:16675866-16675885 | MS.gene061724:CDS | 50.0% | |
| GAGGAAGGATTTGAGGGCAA+TGG | - | chr8.1:16674414-16674433 | None:intergenic | 50.0% | |
| GATCTTGCGGAGATGTACGT+GGG | + | chr8.1:16675721-16675740 | MS.gene061724:CDS | 50.0% | |
| GCAACCAGCCCAAAAATCGA+TGG | + | chr8.1:16674524-16674543 | MS.gene061724:CDS | 50.0% | |
| GGCTACGTGACCAAATGTTC+CGG | + | chr8.1:16675982-16676001 | MS.gene061724:CDS | 50.0% | |
| GGGAAGAGGATGGTTGAAGA+AGG | + | chr8.1:16676075-16676094 | MS.gene061724:CDS | 50.0% | |
| GTGACCAAATGTTCCGGAGA+AGG | + | chr8.1:16675988-16676007 | MS.gene061724:CDS | 50.0% | |
| TATTGGTATGGTGAGGCGTG+AGG | + | chr8.1:16674811-16674830 | MS.gene061724:CDS | 50.0% | |
| ! | ATATCCTCCAATGGACTCCC+AGG | - | chr8.1:16676282-16676301 | None:intergenic | 50.0% |
| ! | ATTTTGCAGCCAAGAGTGGG+AGG | + | chr8.1:16676016-16676035 | MS.gene061724:CDS | 50.0% |
| ! | TTCGTGGCCTTGGATGTTCT+GGG | - | chr8.1:16675924-16675943 | None:intergenic | 50.0% |
| ! | TTTCTGGTGAGGAAATGCGG+AGG | - | chr8.1:16674439-16674458 | None:intergenic | 50.0% |
| !! | GCCTTGGATGTTCTGGGATA+GGG | - | chr8.1:16675918-16675937 | None:intergenic | 50.0% |
| !!! | GATTTTTGGGCTGGTTGCTG+CGG | - | chr8.1:16674522-16674541 | None:intergenic | 50.0% |
| ACCCTCCCTGACAATCTTCG+TGG | - | chr8.1:16675940-16675959 | None:intergenic | 55.0% | |
| AGAGGAATGGCTCCTCCACA+TGG | - | chr8.1:16674668-16674687 | None:intergenic | 55.0% | |
| AGCCCTAACCAAGCTCCCTA+TGG | - | chr8.1:16676322-16676341 | None:intergenic | 55.0% | |
| AGGAGCCATTCCTCTCTGCA+TGG | + | chr8.1:16674673-16674692 | MS.gene061724:CDS | 55.0% | |
| ATGTCGACGGCGACATTCGA+CGG | - | chr8.1:16674764-16674783 | None:intergenic | 55.0% | |
| ATGTCGCCGTCGACATTGGT+AGG | + | chr8.1:16674768-16674787 | MS.gene061724:CDS | 55.0% | |
| ATTGTGCAGGGTTCGGCGAA+TGG | + | chr8.1:16676054-16676073 | MS.gene061724:CDS | 55.0% | |
| CAACGACGGTGAATTTGCGG+CGG | - | chr8.1:16674499-16674518 | None:intergenic | 55.0% | |
| CCAAGGCCACGAAGATTGTC+AGG | + | chr8.1:16675931-16675950 | MS.gene061724:CDS | 55.0% | |
| CCTGACAATCTTCGTGGCCT+TGG | - | chr8.1:16675934-16675953 | None:intergenic | 55.0% | |
| CGGCAACGACGGTGAATTTG+CGG | - | chr8.1:16674502-16674521 | None:intergenic | 55.0% | |
| CGGCGGTCTATGATGTCTAG+TGG | - | chr8.1:16674716-16674735 | None:intergenic | 55.0% | |
| GAGGCCGAGGAAGGATTTGA+GGG | - | chr8.1:16674420-16674439 | None:intergenic | 55.0% | |
| GATGGGAAAACTGGTGGGGT+TGG | + | chr8.1:16674959-16674978 | MS.gene061724:CDS | 55.0% | |
| GCCACGAAGATTGTCAGGGA+GGG | + | chr8.1:16675936-16675955 | MS.gene061724:CDS | 55.0% | |
| GCCATTCCTCTCTGCATGGT+TGG | + | chr8.1:16674677-16674696 | MS.gene061724:CDS | 55.0% | |
| GCCCCCAAAGATCTTGTCCT+CGG | - | chr8.1:16675872-16675891 | None:intergenic | 55.0% | |
| GCCGAGGACAAGATCTTTGG+GGG | + | chr8.1:16675868-16675887 | MS.gene061724:CDS | 55.0% | |
| GGATCTTGCGGAGATGTACG+TGG | + | chr8.1:16675720-16675739 | MS.gene061724:CDS | 55.0% | |
| TCGAATGTCGCCGTCGACAT+TGG | + | chr8.1:16674764-16674783 | MS.gene061724:CDS | 55.0% | |
| TGACAGCGACACGGAGGTTA+CGG | - | chr8.1:16674550-16674569 | None:intergenic | 55.0% | |
| TGCGCAGAGGCAATTGTGCA+GGG | + | chr8.1:16676042-16676061 | MS.gene061724:CDS | 55.0% | |
| TGTTGTGCCTGGGAGTCCAT+TGG | + | chr8.1:16676272-16676291 | MS.gene061724:CDS | 55.0% | |
| TTCGGCGAATGGGAAGAGGA+TGG | + | chr8.1:16676065-16676084 | MS.gene061724:CDS | 55.0% | |
| TTGTGCAGGGTTCGGCGAAT+GGG | + | chr8.1:16676055-16676074 | MS.gene061724:CDS | 55.0% | |
| ! | AACCTCCGTGTCGCTGTCAT+CGG | + | chr8.1:16674551-16674570 | MS.gene061724:CDS | 55.0% |
| ! | CTTCGTGGCCTTGGATGTTC+TGG | - | chr8.1:16675925-16675944 | None:intergenic | 55.0% |
| !! | GGCCTTGGATGTTCTGGGAT+AGG | - | chr8.1:16675919-16675938 | None:intergenic | 55.0% |
| !! | TTCCAGTGCCGACAGCAACA+TGG | - | chr8.1:16675795-16675814 | None:intergenic | 55.0% |
| !!! | ACGGCCATCGATTTTTGGGC+TGG | - | chr8.1:16674531-16674550 | None:intergenic | 55.0% |
| AATTTGCGGCGGTGGGTGGT+GGG | - | chr8.1:16674488-16674507 | None:intergenic | 60.0% | |
| AGGGTTCGGCGAATGGGAAG+AGG | + | chr8.1:16676061-16676080 | MS.gene061724:CDS | 60.0% | |
| GACCATGTTGCTGTCGGCAC+TGG | + | chr8.1:16675790-16675809 | MS.gene061724:CDS | 60.0% | |
| GACGGTGAATTTGCGGCGGT+GGG | - | chr8.1:16674495-16674514 | None:intergenic | 60.0% | |
| GGAGGCCGAGGAAGGATTTG+AGG | - | chr8.1:16674421-16674440 | None:intergenic | 60.0% | |
| GGCCACGAAGATTGTCAGGG+AGG | + | chr8.1:16675935-16675954 | MS.gene061724:CDS | 60.0% | |
| GGGCAAGATTATCCGCGTGG+AGG | + | chr8.1:16675888-16675907 | MS.gene061724:CDS | 60.0% | |
| GGGGCGGAAGGAGAATTGAG+TGG | - | chr8.1:16674462-16674481 | None:intergenic | 60.0% | |
| GTGCGCAGAGGCAATTGTGC+AGG | + | chr8.1:16676041-16676060 | MS.gene061724:CDS | 60.0% | |
| TGCGCACATCCTCCCACTCT+TGG | - | chr8.1:16676028-16676047 | None:intergenic | 60.0% | |
| TGGGGGCAAGATTATCCGCG+TGG | + | chr8.1:16675885-16675904 | MS.gene061724:CDS | 60.0% | |
| TGTGCCTGGGAGTCCATTGG+AGG | + | chr8.1:16676275-16676294 | MS.gene061724:CDS | 60.0% | |
| CACCGCCGATGACAGCGACA+CGG | - | chr8.1:16674559-16674578 | None:intergenic | 65.0% | |
| CGACGGTGAATTTGCGGCGG+TGG | - | chr8.1:16674496-16674515 | None:intergenic | 65.0% | |
| GAATTTGCGGCGGTGGGTGG+TGG | - | chr8.1:16674489-16674508 | None:intergenic | 65.0% | |
| GAGTGGGAGGATGTGCGCAG+AGG | + | chr8.1:16676029-16676048 | MS.gene061724:CDS | 65.0% | |
| GCGCTTGTGGGTGATGCTGC+TGG | + | chr8.1:16675961-16675980 | MS.gene061724:CDS | 65.0% | |
| GCTGGTTGCTGCGGCAACGA+CGG | - | chr8.1:16674513-16674532 | None:intergenic | 65.0% | |
| GGAAATGCGGAGGCCGAGGA+AGG | - | chr8.1:16674429-16674448 | None:intergenic | 65.0% | |
| GGATAGGGTGAGCCTCCACG+CGG | - | chr8.1:16675903-16675922 | None:intergenic | 65.0% | |
| GGTGAATTTGCGGCGGTGGG+TGG | - | chr8.1:16674492-16674511 | None:intergenic | 65.0% | |
| GTGAGGAAATGCGGAGGCCG+AGG | - | chr8.1:16674433-16674452 | None:intergenic | 65.0% | |
| TCAGGGAGGGTCGCGCTTGT+GGG | + | chr8.1:16675949-16675968 | MS.gene061724:CDS | 65.0% | |
| TCTGCTGCTGCACCTCCAGC+TGG | - | chr8.1:16674584-16674603 | None:intergenic | 65.0% | |
| ! | CTCCGTGTCGCTGTCATCGG+CGG | + | chr8.1:16674554-16674573 | MS.gene061724:CDS | 65.0% |
| ATCGGCGGTGGTCCAGCTGG+AGG | + | chr8.1:16674569-16674588 | MS.gene061724:CDS | 70.0% | |
| CGCCGATGACAGCGACACGG+AGG | - | chr8.1:16674556-16674575 | None:intergenic | 70.0% | |
| GTCAGGGAGGGTCGCGCTTG+TGG | + | chr8.1:16675948-16675967 | MS.gene061724:CDS | 70.0% | |
| GTCATCGGCGGTGGTCCAGC+TGG | + | chr8.1:16674566-16674585 | MS.gene061724:CDS | 70.0% | |
| ! | CGTGTCGCTGTCATCGGCGG+TGG | + | chr8.1:16674557-16674576 | MS.gene061724:CDS | 70.0% |
| !! | CGGCGGTGGGTGGTGGGTTT+GGG | - | chr8.1:16674482-16674501 | None:intergenic | 70.0% |
| !! | GGCGGTGGGTGGTGGGTTTG+GGG | - | chr8.1:16674481-16674500 | None:intergenic | 70.0% |
| !! | GGTGGGTGGTGGGTTTGGGG+CGG | - | chr8.1:16674478-16674497 | None:intergenic | 70.0% |
| !! | GGTGGTGGGTTTGGGGCGGA+AGG | - | chr8.1:16674474-16674493 | None:intergenic | 70.0% |
| !! | GCGGCGGTGGGTGGTGGGTT+TGG | - | chr8.1:16674483-16674502 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 16674404 | 16676380 | 16674404 | ID=MS.gene061724 |
| chr8.1 | mRNA | 16674404 | 16676380 | 16674404 | ID=MS.gene061724.t1;Parent=MS.gene061724 |
| chr8.1 | exon | 16674404 | 16675090 | 16674404 | ID=MS.gene061724.t1.exon1;Parent=MS.gene061724.t1 |
| chr8.1 | CDS | 16674404 | 16675090 | 16674404 | ID=cds.MS.gene061724.t1;Parent=MS.gene061724.t1 |
| chr8.1 | exon | 16675679 | 16676380 | 16675679 | ID=MS.gene061724.t1.exon2;Parent=MS.gene061724.t1 |
| chr8.1 | CDS | 16675679 | 16676380 | 16675679 | ID=cds.MS.gene061724.t1;Parent=MS.gene061724.t1 |
| Gene Sequence |
| Protein sequence |
