Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72856.t1 | XP_003612637.2 | 96.9 | 321 | 9 | 1 | 1 | 321 | 1 | 320 | 1.20E-173 | 619 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72856.t1 | Q8H0W0 | 25.0 | 296 | 176 | 12 | 57 | 318 | 35 | 318 | 2.4e-08 | 61.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72856.t1 | G7K855 | 96.9 | 321 | 9 | 1 | 1 | 321 | 1 | 320 | 8.9e-174 | 619.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene72856 | 0.82719 | 1.79E-54 | -1.69E-46 |
| MS.gene049171 | MS.gene72856 | 0.851235 | 1.01E-60 | -1.69E-46 |
| MS.gene049217 | MS.gene72856 | 0.838109 | 3.50E-57 | -1.69E-46 |
| MS.gene049222 | MS.gene72856 | 0.857048 | 2.13E-62 | -1.69E-46 |
| MS.gene049232 | MS.gene72856 | 0.807692 | 4.46E-50 | -1.69E-46 |
| MS.gene049285 | MS.gene72856 | 0.869409 | 3.16E-66 | -1.69E-46 |
| MS.gene049320 | MS.gene72856 | 0.878171 | 3.49E-69 | -1.69E-46 |
| MS.gene049609 | MS.gene72856 | 0.861632 | 8.95E-64 | -1.69E-46 |
| MS.gene049611 | MS.gene72856 | -0.81725 | 3.63E-52 | -1.69E-46 |
| MS.gene049627 | MS.gene72856 | 0.805655 | 1.20E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene72856 | 0.819103 | 1.38E-52 | -1.69E-46 |
| MS.gene049805 | MS.gene72856 | 0.839641 | 1.40E-57 | -1.69E-46 |
| MS.gene05010 | MS.gene72856 | 0.849409 | 3.29E-60 | -1.69E-46 |
| MS.gene050163 | MS.gene72856 | 0.844389 | 7.79E-59 | -1.69E-46 |
| MS.gene050165 | MS.gene72856 | 0.836255 | 1.04E-56 | -1.69E-46 |
| MS.gene050170 | MS.gene72856 | 0.827418 | 1.58E-54 | -1.69E-46 |
| MS.gene050323 | MS.gene72856 | 0.841273 | 5.25E-58 | -1.69E-46 |
| MS.gene050333 | MS.gene72856 | 0.814164 | 1.77E-51 | -1.69E-46 |
| MS.gene050381 | MS.gene72856 | -0.802004 | 6.89E-49 | -1.69E-46 |
| MS.gene050496 | MS.gene72856 | 0.816673 | 4.90E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene72856 | 0.87578 | 2.35E-68 | -1.69E-46 |
| MS.gene050518 | MS.gene72856 | 0.831672 | 1.46E-55 | -1.69E-46 |
| MS.gene050538 | MS.gene72856 | 0.82081 | 5.63E-53 | -1.69E-46 |
| MS.gene050577 | MS.gene72856 | 0.834181 | 3.48E-56 | -1.69E-46 |
| MS.gene050593 | MS.gene72856 | 0.805335 | 1.40E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene72856 | 0.865367 | 6.22E-65 | -1.69E-46 |
| MS.gene050675 | MS.gene72856 | 0.83113 | 1.99E-55 | -1.69E-46 |
| MS.gene050686 | MS.gene72856 | 0.807095 | 5.98E-50 | -1.69E-46 |
| MS.gene050699 | MS.gene72856 | 0.856125 | 3.97E-62 | -1.69E-46 |
| MS.gene050747 | MS.gene72856 | 0.842974 | 1.86E-58 | -1.69E-46 |
| MS.gene050772 | MS.gene72856 | 0.877932 | 4.23E-69 | -1.69E-46 |
| MS.gene05081 | MS.gene72856 | 0.804124 | 2.51E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene72856 | 0.8491 | 4.01E-60 | -1.69E-46 |
| MS.gene050871 | MS.gene72856 | 0.849694 | 2.74E-60 | -1.69E-46 |
| MS.gene050876 | MS.gene72856 | 0.814016 | 1.91E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene72856 | 0.842381 | 2.68E-58 | -1.69E-46 |
| MS.gene050986 | MS.gene72856 | 0.850171 | 2.02E-60 | -1.69E-46 |
| MS.gene05100 | MS.gene72856 | 0.823946 | 1.05E-53 | -1.69E-46 |
| MS.gene05104 | MS.gene72856 | -0.82072 | 5.91E-53 | -1.69E-46 |
| MS.gene051127 | MS.gene72856 | -0.801759 | 7.74E-49 | -1.69E-46 |
| MS.gene051317 | MS.gene72856 | 0.809673 | 1.68E-50 | -1.69E-46 |
| MS.gene051551 | MS.gene72856 | 0.840283 | 9.55E-58 | -1.69E-46 |
| MS.gene051666 | MS.gene72856 | 0.822391 | 2.43E-53 | -1.69E-46 |
| MS.gene051692 | MS.gene72856 | 0.842604 | 2.34E-58 | -1.69E-46 |
| MS.gene051694 | MS.gene72856 | 0.841755 | 3.92E-58 | -1.69E-46 |
| MS.gene051810 | MS.gene72856 | 0.875145 | 3.88E-68 | -1.69E-46 |
| MS.gene051838 | MS.gene72856 | 0.827805 | 1.28E-54 | -1.69E-46 |
| MS.gene051858 | MS.gene72856 | 0.860368 | 2.17E-63 | -1.69E-46 |
| MS.gene052164 | MS.gene72856 | 0.862231 | 5.87E-64 | -1.69E-46 |
| MS.gene052271 | MS.gene72856 | 0.811578 | 6.53E-51 | -1.69E-46 |
| MS.gene052322 | MS.gene72856 | 0.807498 | 4.91E-50 | -1.69E-46 |
| MS.gene052421 | MS.gene72856 | 0.801016 | 1.10E-48 | -1.69E-46 |
| MS.gene052482 | MS.gene72856 | 0.806393 | 8.41E-50 | -1.69E-46 |
| MS.gene052484 | MS.gene72856 | 0.802126 | 6.50E-49 | -1.69E-46 |
| MS.gene052486 | MS.gene72856 | 0.824853 | 6.44E-54 | -1.69E-46 |
| MS.gene052501 | MS.gene72856 | 0.802837 | 4.64E-49 | -1.69E-46 |
| MS.gene052503 | MS.gene72856 | 0.835552 | 1.57E-56 | -1.69E-46 |
| MS.gene052504 | MS.gene72856 | 0.810773 | 9.76E-51 | -1.69E-46 |
| MS.gene052506 | MS.gene72856 | 0.828742 | 7.59E-55 | -1.69E-46 |
| MS.gene052615 | MS.gene72856 | 0.880943 | 3.62E-70 | -1.69E-46 |
| MS.gene052822 | MS.gene72856 | 0.837345 | 5.49E-57 | -1.69E-46 |
| MS.gene052823 | MS.gene72856 | 0.835232 | 1.89E-56 | -1.69E-46 |
| MS.gene052825 | MS.gene72856 | 0.837193 | 6.01E-57 | -1.69E-46 |
| MS.gene052870 | MS.gene72856 | 0.800407 | 1.46E-48 | -1.69E-46 |
| MS.gene052872 | MS.gene72856 | 0.815351 | 9.67E-52 | -1.69E-46 |
| MS.gene052916 | MS.gene72856 | 0.828266 | 9.89E-55 | -1.69E-46 |
| MS.gene052966 | MS.gene72856 | 0.833579 | 4.92E-56 | -1.69E-46 |
| MS.gene052982 | MS.gene72856 | 0.803636 | 3.17E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene72856 | 0.843542 | 1.31E-58 | -1.69E-46 |
| MS.gene053207 | MS.gene72856 | 0.852711 | 3.86E-61 | -1.69E-46 |
| MS.gene053213 | MS.gene72856 | 0.878442 | 2.80E-69 | -1.69E-46 |
| MS.gene053286 | MS.gene72856 | 0.874519 | 6.34E-68 | -1.69E-46 |
| MS.gene053420 | MS.gene72856 | -0.822525 | 2.26E-53 | -1.69E-46 |
| MS.gene053436 | MS.gene72856 | 0.844478 | 7.37E-59 | -1.69E-46 |
| MS.gene053449 | MS.gene72856 | 0.800553 | 1.37E-48 | -1.69E-46 |
| MS.gene053479 | MS.gene72856 | 0.817821 | 2.70E-52 | -1.69E-46 |
| MS.gene053480 | MS.gene72856 | 0.825254 | 5.18E-54 | -1.69E-46 |
| MS.gene053561 | MS.gene72856 | -0.800439 | 1.44E-48 | -1.69E-46 |
| MS.gene053574 | MS.gene72856 | 0.858544 | 7.66E-63 | -1.69E-46 |
| MS.gene053626 | MS.gene72856 | 0.812564 | 3.98E-51 | -1.69E-46 |
| MS.gene053632 | MS.gene72856 | 0.855626 | 5.56E-62 | -1.69E-46 |
| MS.gene053824 | MS.gene72856 | 0.853153 | 2.88E-61 | -1.69E-46 |
| MS.gene053916 | MS.gene72856 | 0.83209 | 1.15E-55 | -1.69E-46 |
| MS.gene054408 | MS.gene72856 | 0.854447 | 1.22E-61 | -1.69E-46 |
| MS.gene054595 | MS.gene72856 | 0.818444 | 1.95E-52 | -1.69E-46 |
| MS.gene054600 | MS.gene72856 | 0.859222 | 4.80E-63 | -1.69E-46 |
| MS.gene054642 | MS.gene72856 | 0.871057 | 9.13E-67 | -1.69E-46 |
| MS.gene054706 | MS.gene72856 | -0.805796 | 1.12E-49 | -1.69E-46 |
| MS.gene054708 | MS.gene72856 | -0.806636 | 7.47E-50 | -1.69E-46 |
| MS.gene05470 | MS.gene72856 | 0.838241 | 3.23E-57 | -1.69E-46 |
| MS.gene05494 | MS.gene72856 | 0.835983 | 1.22E-56 | -1.69E-46 |
| MS.gene054954 | MS.gene72856 | 0.854755 | 9.96E-62 | -1.69E-46 |
| MS.gene05505 | MS.gene72856 | 0.842174 | 3.04E-58 | -1.69E-46 |
| MS.gene055154 | MS.gene72856 | -0.819249 | 1.28E-52 | -1.69E-46 |
| MS.gene055206 | MS.gene72856 | 0.835368 | 1.75E-56 | -1.69E-46 |
| MS.gene055224 | MS.gene72856 | 0.826557 | 2.54E-54 | -1.69E-46 |
| MS.gene055289 | MS.gene72856 | 0.825484 | 4.57E-54 | -1.69E-46 |
| MS.gene055362 | MS.gene72856 | 0.883831 | 3.22E-71 | -1.69E-46 |
| MS.gene055499 | MS.gene72856 | 0.812811 | 3.51E-51 | -1.69E-46 |
| MS.gene055502 | MS.gene72856 | 0.860059 | 2.69E-63 | -1.69E-46 |
| MS.gene055577 | MS.gene72856 | 0.881527 | 2.23E-70 | -1.69E-46 |
| MS.gene055722 | MS.gene72856 | 0.851288 | 9.79E-61 | -1.69E-46 |
| MS.gene055748 | MS.gene72856 | 0.811598 | 6.46E-51 | -1.69E-46 |
| MS.gene055750 | MS.gene72856 | 0.815801 | 7.67E-52 | -1.69E-46 |
| MS.gene055751 | MS.gene72856 | 0.8119 | 5.55E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene72856 | 0.837017 | 6.66E-57 | -1.69E-46 |
| MS.gene05592 | MS.gene72856 | 0.819564 | 1.09E-52 | -1.69E-46 |
| MS.gene055941 | MS.gene72856 | 0.838628 | 2.57E-57 | -1.69E-46 |
| MS.gene056046 | MS.gene72856 | 0.805058 | 1.60E-49 | -1.69E-46 |
| MS.gene056083 | MS.gene72856 | 0.809199 | 2.13E-50 | -1.69E-46 |
| MS.gene056374 | MS.gene72856 | 0.878644 | 2.38E-69 | -1.69E-46 |
| MS.gene056409 | MS.gene72856 | 0.834152 | 3.54E-56 | -1.69E-46 |
| MS.gene056448 | MS.gene72856 | 0.811857 | 5.68E-51 | -1.69E-46 |
| MS.gene056487 | MS.gene72856 | 0.807012 | 6.22E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene72856 | 0.861104 | 1.30E-63 | -1.69E-46 |
| MS.gene056510 | MS.gene72856 | 0.834275 | 3.29E-56 | -1.69E-46 |
| MS.gene056610 | MS.gene72856 | 0.830213 | 3.33E-55 | -1.69E-46 |
| MS.gene056657 | MS.gene72856 | 0.871731 | 5.46E-67 | -1.69E-46 |
| MS.gene05666 | MS.gene72856 | 0.819346 | 1.22E-52 | -1.69E-46 |
| MS.gene056692 | MS.gene72856 | 0.828974 | 6.67E-55 | -1.69E-46 |
| MS.gene056946 | MS.gene72856 | 0.82808 | 1.10E-54 | -1.69E-46 |
| MS.gene057048 | MS.gene72856 | 0.812485 | 4.14E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene72856 | 0.812885 | 3.38E-51 | -1.69E-46 |
| MS.gene057086 | MS.gene72856 | 0.820881 | 5.43E-53 | -1.69E-46 |
| MS.gene057129 | MS.gene72856 | 0.817176 | 3.78E-52 | -1.69E-46 |
| MS.gene057331 | MS.gene72856 | 0.831719 | 1.42E-55 | -1.69E-46 |
| MS.gene057416 | MS.gene72856 | 0.845454 | 4.02E-59 | -1.69E-46 |
| MS.gene057658 | MS.gene72856 | 0.819809 | 9.56E-53 | -1.69E-46 |
| MS.gene057831 | MS.gene72856 | 0.820697 | 5.98E-53 | -1.69E-46 |
| MS.gene057856 | MS.gene72856 | 0.814947 | 1.19E-51 | -1.69E-46 |
| MS.gene057857 | MS.gene72856 | 0.801206 | 1.00E-48 | -1.69E-46 |
| MS.gene057926 | MS.gene72856 | 0.826568 | 2.53E-54 | -1.69E-46 |
| MS.gene058006 | MS.gene72856 | 0.845054 | 5.16E-59 | -1.69E-46 |
| MS.gene058130 | MS.gene72856 | 0.841455 | 4.70E-58 | -1.69E-46 |
| MS.gene058157 | MS.gene72856 | 0.838311 | 3.10E-57 | -1.69E-46 |
| MS.gene058323 | MS.gene72856 | 0.833555 | 4.99E-56 | -1.69E-46 |
| MS.gene058338 | MS.gene72856 | 0.801255 | 9.81E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene72856 | 0.837125 | 6.25E-57 | -1.69E-46 |
| MS.gene058419 | MS.gene72856 | 0.869036 | 4.18E-66 | -1.69E-46 |
| MS.gene058544 | MS.gene72856 | 0.842433 | 2.59E-58 | -1.69E-46 |
| MS.gene058723 | MS.gene72856 | 0.853439 | 2.39E-61 | -1.69E-46 |
| MS.gene058773 | MS.gene72856 | 0.848718 | 5.13E-60 | -1.69E-46 |
| MS.gene058838 | MS.gene72856 | 0.874134 | 8.56E-68 | -1.69E-46 |
| MS.gene05883 | MS.gene72856 | 0.825035 | 5.84E-54 | -1.69E-46 |
| MS.gene059022 | MS.gene72856 | 0.886196 | 4.22E-72 | -1.69E-46 |
| MS.gene059023 | MS.gene72856 | 0.85978 | 3.26E-63 | -1.69E-46 |
| MS.gene05913 | MS.gene72856 | 0.805687 | 1.18E-49 | -1.69E-46 |
| MS.gene059305 | MS.gene72856 | 0.804003 | 2.66E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene72856 | 0.816673 | 4.90E-52 | -1.69E-46 |
| MS.gene059367 | MS.gene72856 | 0.822563 | 2.22E-53 | -1.69E-46 |
| MS.gene059536 | MS.gene72856 | 0.802797 | 4.73E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene72856 | 0.872087 | 4.16E-67 | -1.69E-46 |
| MS.gene059699 | MS.gene72856 | -0.803518 | 3.36E-49 | -1.69E-46 |
| MS.gene059718 | MS.gene72856 | 0.883761 | 3.41E-71 | -1.69E-46 |
| MS.gene059756 | MS.gene72856 | 0.811537 | 6.66E-51 | -1.69E-46 |
| MS.gene059801 | MS.gene72856 | 0.826371 | 2.81E-54 | -1.69E-46 |
| MS.gene059865 | MS.gene72856 | 0.854672 | 1.05E-61 | -1.69E-46 |
| MS.gene059902 | MS.gene72856 | 0.855857 | 4.76E-62 | -1.69E-46 |
| MS.gene06000 | MS.gene72856 | 0.815711 | 8.04E-52 | -1.69E-46 |
| MS.gene06046 | MS.gene72856 | 0.803275 | 3.77E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene72856 | 0.86154 | 9.55E-64 | -1.69E-46 |
| MS.gene060703 | MS.gene72856 | 0.83306 | 6.63E-56 | -1.69E-46 |
| MS.gene060728 | MS.gene72856 | 0.804655 | 1.95E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene72856 | 0.864024 | 1.64E-64 | -1.69E-46 |
| MS.gene060778 | MS.gene72856 | 0.839073 | 1.97E-57 | -1.69E-46 |
| MS.gene06077 | MS.gene72856 | 0.880066 | 7.45E-70 | -1.69E-46 |
| MS.gene060804 | MS.gene72856 | 0.813271 | 2.78E-51 | -1.69E-46 |
| MS.gene060835 | MS.gene72856 | 0.810421 | 1.16E-50 | -1.69E-46 |
| MS.gene060837 | MS.gene72856 | 0.810835 | 9.46E-51 | -1.69E-46 |
| MS.gene06092 | MS.gene72856 | 0.8476 | 1.04E-59 | -1.69E-46 |
| MS.gene060982 | MS.gene72856 | 0.858155 | 1.00E-62 | -1.69E-46 |
| MS.gene061134 | MS.gene72856 | 0.809048 | 2.29E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene72856 | 0.848914 | 4.52E-60 | -1.69E-46 |
| MS.gene061200 | MS.gene72856 | 0.806433 | 8.25E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72856.t1 | MTR_5g027220 | 96.885 | 321 | 9 | 1 | 1 | 321 | 1 | 320 | 0.0 | 635 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72856.t1 | AT5G48790 | 64.596 | 322 | 96 | 5 | 2 | 318 | 5 | 313 | 3.65e-146 | 414 |
| MS.gene72856.t1 | AT5G48790 | 61.224 | 245 | 78 | 4 | 2 | 241 | 5 | 237 | 1.57e-95 | 283 |
| MS.gene72856.t1 | AT5G48790 | 61.224 | 245 | 78 | 4 | 2 | 241 | 5 | 237 | 1.57e-95 | 283 |
Find 67 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTCTTCTGTTTCAGCTTC+TGG | 0.227839 | 5.1:-17731070 | MS.gene72856:CDS |
| AGGGAAGAGGGTGTTATTAT+TGG | 0.229518 | 5.1:+17731294 | None:intergenic |
| TAGCTGTTTGTTATCCTTCA+TGG | 0.246471 | 5.1:+17729030 | None:intergenic |
| CATTCTTCTCAGGACCTTCC+AGG | 0.258428 | 5.1:+17727168 | None:intergenic |
| CTACCGTTGACATTGAAATA+TGG | 0.280220 | 5.1:+17727892 | None:intergenic |
| AATGGTGGGTTTATCAGAAT+TGG | 0.317994 | 5.1:-17731142 | MS.gene72856:CDS |
| GGCTAAAGTTGCAGTGGAAT+TGG | 0.351634 | 5.1:-17729053 | MS.gene72856:CDS |
| AAGTCTACTTCGTTAGCTTC+TGG | 0.359116 | 5.1:+17728060 | None:intergenic |
| TTCGTAAGTTCAGCAAGCTT+TGG | 0.368606 | 5.1:+17727498 | None:intergenic |
| CTCAGGACCTTCCAGGGTCC+TGG | 0.401002 | 5.1:+17727175 | None:intergenic |
| TACTACTCCCCATTCTTCTC+AGG | 0.409708 | 5.1:+17727158 | None:intergenic |
| TGGAAGGTCCTGAGAAGAAT+GGG | 0.428971 | 5.1:-17727166 | MS.gene72856:CDS |
| GTTGTTAATACCGTTGAAGA+TGG | 0.430296 | 5.1:+17731270 | None:intergenic |
| GAAGGATAACAAACAGCTAA+TGG | 0.436771 | 5.1:-17729026 | MS.gene72856:intron |
| TCTGTTTCAGCTTCTGGCGA+TGG | 0.440053 | 5.1:-17731064 | MS.gene72856:CDS |
| CTACTTGTAGGTACCATTGA+AGG | 0.455960 | 5.1:+17731106 | None:intergenic |
| GAAGTCCTTTCTACCTTCCA+TGG | 0.456657 | 5.1:-17727478 | MS.gene72856:CDS |
| ACGAATCAATTGCATGCTTC+CGG | 0.458484 | 5.1:+17728736 | None:intergenic |
| GAAATTGACCGTATCAGATC+TGG | 0.465914 | 5.1:-17727714 | MS.gene72856:CDS |
| GAGATTGAGTTTCCCACAGC+TGG | 0.466925 | 5.1:-17728893 | MS.gene72856:CDS |
| TACCGTTGACATTGAAATAT+GGG | 0.469846 | 5.1:+17727893 | None:intergenic |
| TCAGAGTAATCAAAAGGAAA+AGG | 0.483879 | 5.1:+17731016 | None:intergenic |
| ATATGTCTGTCTACATCAGC+AGG | 0.485033 | 5.1:-17727134 | MS.gene72856:CDS |
| CTGGAAGGTCCTGAGAAGAA+TGG | 0.492934 | 5.1:-17727167 | MS.gene72856:CDS |
| AATTTCAAGGGTCGCGATAG+AGG | 0.494818 | 5.1:-17727435 | MS.gene72856:CDS |
| ATTCTTCTCAGGACCTTCCA+GGG | 0.499708 | 5.1:+17727169 | None:intergenic |
| TATTACATTCATAATTTCAA+GGG | 0.505529 | 5.1:-17727447 | MS.gene72856:CDS |
| AGTTTCCATGGAAGGTAGAA+AGG | 0.512868 | 5.1:+17727473 | None:intergenic |
| TGCAGTGGAATTGGCCATGA+AGG | 0.513837 | 5.1:-17729044 | MS.gene72856:CDS |
| AGGGATCACTGCTCCTTCAA+TGG | 0.515000 | 5.1:-17731119 | MS.gene72856:CDS |
| GTATTACATTCATAATTTCA+AGG | 0.518169 | 5.1:-17727448 | MS.gene72856:CDS |
| AGAAGCTCAGAGTAATCAAA+AGG | 0.518809 | 5.1:+17731010 | None:intergenic |
| AATGTAATACACAGTTTCCA+TGG | 0.519031 | 5.1:+17727461 | None:intergenic |
| CGTTGAAGATGGGAGGGAAG+AGG | 0.521616 | 5.1:+17731281 | None:intergenic |
| GGTGGGTTTATCAGAATTGG+AGG | 0.528447 | 5.1:-17731139 | MS.gene72856:CDS |
| AGTAGACTTTGCAAGACAAT+CGG | 0.535436 | 5.1:-17728046 | MS.gene72856:CDS |
| GATTCTCTAGGGTCTCAAGT+TGG | 0.545296 | 5.1:-17731182 | MS.gene72856:intron |
| GCTGGACTCGAATCCGTACC+AGG | 0.545971 | 5.1:-17728875 | MS.gene72856:intron |
| AGGGCAACTTCTTTGAGAGA+TGG | 0.550489 | 5.1:+17727103 | None:intergenic |
| GTTGAAGATGGGAGGGAAGA+GGG | 0.550698 | 5.1:+17731282 | None:intergenic |
| TTGTTAATACCGTTGAAGAT+GGG | 0.551534 | 5.1:+17731271 | None:intergenic |
| GCAAGACAATCGGCCTTCAG+TGG | 0.552335 | 5.1:-17728036 | MS.gene72856:CDS |
| ATCACAGGTGATGGTGAAGG+TGG | 0.566648 | 5.1:-17728770 | MS.gene72856:intron |
| GAAATATATAGGACCTGGTA+CGG | 0.572631 | 5.1:+17728862 | None:intergenic |
| CTCTTCCCTCCCATCTTCAA+CGG | 0.574000 | 5.1:-17731280 | MS.gene72856:intron |
| GGATACAGCCAGATCTGATA+CGG | 0.578864 | 5.1:+17727706 | None:intergenic |
| GAAGGTGGAATAGAGATGAC+CGG | 0.583492 | 5.1:-17728755 | MS.gene72856:CDS |
| TACGGATTCGAGTCCAGCTG+TGG | 0.585974 | 5.1:+17728880 | None:intergenic |
| TTAATACCGTTGAAGATGGG+AGG | 0.593151 | 5.1:+17731274 | None:intergenic |
| GCAAGCTTTGGATAAAAGAA+CGG | 0.596039 | 5.1:+17727510 | None:intergenic |
| CTTAAAAGAAGCTCCACTGA+AGG | 0.601180 | 5.1:+17728023 | None:intergenic |
| TACCCATATTTCAATGTCAA+CGG | 0.602169 | 5.1:-17727895 | MS.gene72856:intron |
| TAATACACAGTTTCCATGGA+AGG | 0.605202 | 5.1:+17727465 | None:intergenic |
| AAGCAGTCGTGAACACTGAA+CGG | 0.612733 | 5.1:-17727758 | MS.gene72856:CDS |
| TAATACCGTTGAAGATGGGA+GGG | 0.612856 | 5.1:+17731275 | None:intergenic |
| GTAGGTGCTATCCAGGACCC+TGG | 0.616080 | 5.1:-17727186 | MS.gene72856:intron |
| GTTGACATTGAAATATGGGT+AGG | 0.616675 | 5.1:+17727897 | None:intergenic |
| GTGCTATCCAGGACCCTGGA+AGG | 0.616742 | 5.1:-17727182 | MS.gene72856:CDS |
| TATTTCAGAAATGCTTGTTG+TGG | 0.620508 | 5.1:-17727796 | MS.gene72856:intron |
| TATATCACAGGTGATGGTGA+AGG | 0.621564 | 5.1:-17728773 | MS.gene72856:intron |
| CCGACAGGCTAAAGTTGCAG+TGG | 0.630703 | 5.1:-17729059 | MS.gene72856:intron |
| GTCGGACAGAGTGAAGGCAG+AGG | 0.640476 | 5.1:-17727938 | MS.gene72856:CDS |
| AGCTTTGGATAAAAGAACGG+TGG | 0.641177 | 5.1:+17727513 | None:intergenic |
| GTGGGTTTATCAGAATTGGA+GGG | 0.641413 | 5.1:-17731138 | MS.gene72856:CDS |
| GCTTTGGATAAAAGAACGGT+GGG | 0.642896 | 5.1:+17727514 | None:intergenic |
| ACGGATTCGAGTCCAGCTGT+GGG | 0.655887 | 5.1:+17728881 | None:intergenic |
| GGAAGGTCCTGAGAAGAATG+GGG | 0.693212 | 5.1:-17727165 | MS.gene72856:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAGTAATTATTTGTAT+AGG | - | chr5.1:17728171-17728190 | MS.gene72856:intron | 10.0% |
| !!! | ATTTTTTTATTGAAACATTT+TGG | - | chr5.1:17728831-17728850 | MS.gene72856:intron | 10.0% |
| !!! | TTTTGTCAAAAAAAAAATTA+TGG | + | chr5.1:17728041-17728060 | None:intergenic | 10.0% |
| !! | ACTAAAAAGTTTAAATTAGA+AGG | + | chr5.1:17728014-17728033 | None:intergenic | 15.0% |
| !! | ATCATATCATATAATTAAAG+GGG | - | chr5.1:17728097-17728116 | MS.gene72856:intron | 15.0% |
| !! | ATGAAATCAATCAATTTAAT+CGG | + | chr5.1:17727710-17727729 | None:intergenic | 15.0% |
| !! | CATCATATCATATAATTAAA+GGG | - | chr5.1:17728096-17728115 | MS.gene72856:intron | 15.0% |
| !! | CTAAAAAGTTTAAATTAGAA+GGG | + | chr5.1:17728013-17728032 | None:intergenic | 15.0% |
| !! | GTTATCTTTAATATAAACAA+TGG | - | chr5.1:17730536-17730555 | MS.gene72856:intron | 15.0% |
| !! | TATAACTTTATTGAACATTT+AGG | - | chr5.1:17727541-17727560 | MS.gene72856:intron | 15.0% |
| !! | TATTACATTCATAATTTCAA+GGG | - | chr5.1:17730943-17730962 | MS.gene72856:intron | 15.0% |
| !! | TCATCATATCATATAATTAA+AGG | - | chr5.1:17728095-17728114 | MS.gene72856:intron | 15.0% |
| !! | TTATACTATATACAGTATTA+TGG | + | chr5.1:17728072-17728091 | None:intergenic | 15.0% |
| !!! | TATATTCCTTTAAAGTATTA+GGG | + | chr5.1:17729100-17729119 | None:intergenic | 15.0% |
| !!! | TTATATTCCTTTAAAGTATT+AGG | + | chr5.1:17729101-17729120 | None:intergenic | 15.0% |
| !! | AATATACCCTAATACTTTAA+AGG | - | chr5.1:17729091-17729110 | MS.gene72856:intron | 20.0% |
| !! | ACTTATTTAAGCTTATATAG+TGG | + | chr5.1:17729064-17729083 | None:intergenic | 20.0% |
| !! | GAAATTGTATTATAAGCTAT+CGG | - | chr5.1:17728332-17728351 | MS.gene72856:intron | 20.0% |
| !! | GTATTACATTCATAATTTCA+AGG | - | chr5.1:17730942-17730961 | MS.gene72856:intron | 20.0% |
| !! | GTTTATATTAAAGATAACAG+AGG | + | chr5.1:17730534-17730553 | None:intergenic | 20.0% |
| !! | TCTTGATAAAAGTTTAAAAG+AGG | + | chr5.1:17728428-17728447 | None:intergenic | 20.0% |
| !! | TCTTTAATATAAACAATGGA+CGG | - | chr5.1:17730540-17730559 | MS.gene72856:intron | 20.0% |
| !!! | AAAGTTCTTTCTTTTAACTA+GGG | + | chr5.1:17727916-17727935 | None:intergenic | 20.0% |
| !!! | AGAAACTGATTTCTTTTTTT+AGG | - | chr5.1:17727782-17727801 | MS.gene72856:CDS | 20.0% |
| !!! | ATGTTGAGTTTTAATATTGA+TGG | - | chr5.1:17727459-17727478 | MS.gene72856:CDS | 20.0% |
| !!! | ATTTTTGAAGGAAAATAGTA+AGG | + | chr5.1:17727153-17727172 | None:intergenic | 20.0% |
| !!! | GAAACTTTTTCTCTTAAAAA+TGG | - | chr5.1:17727230-17727249 | MS.gene72856:intron | 20.0% |
| !!! | GTGTTTATCAAATTTTATGT+AGG | - | chr5.1:17731186-17731205 | MS.gene72856:intron | 20.0% |
| !!! | TAAAGTTCTTTCTTTTAACT+AGG | + | chr5.1:17727917-17727936 | None:intergenic | 20.0% |
| !!! | TCTTGAATTTTGAATTACTA+CGG | - | chr5.1:17727882-17727901 | MS.gene72856:intron | 20.0% |
| !!! | TTAAAGTATTAGGGTATATT+TGG | + | chr5.1:17729091-17729110 | None:intergenic | 20.0% |
| !!! | TTAAGATTGTTGTTCATTAT+AGG | + | chr5.1:17729473-17729492 | None:intergenic | 20.0% |
| !!! | TTTTGTCAACAAATAAAACA+TGG | + | chr5.1:17727760-17727779 | None:intergenic | 20.0% |
| !!! | TTTTTGAAGGAAAATAGTAA+GGG | + | chr5.1:17727152-17727171 | None:intergenic | 20.0% |
| ! | AATGAACAACAATCTTAAAC+AGG | - | chr5.1:17729475-17729494 | MS.gene72856:intron | 25.0% |
| ! | AGAAAATAGTAATCCTTGAA+TGG | - | chr5.1:17730843-17730862 | MS.gene72856:intron | 25.0% |
| ! | CCAAAATCTTGAAAAAATGA+AGG | + | chr5.1:17730411-17730430 | None:intergenic | 25.0% |
| ! | CTATATACAGTATTATGGTA+AGG | + | chr5.1:17728067-17728086 | None:intergenic | 25.0% |
| ! | TACTTCAAGAACTAAATTGA+TGG | - | chr5.1:17727731-17727750 | MS.gene72856:CDS | 25.0% |
| ! | TATTCCTTGATGAAATGAAA+AGG | - | chr5.1:17729772-17729791 | MS.gene72856:intron | 25.0% |
| ! | TGATAAAAGTTTAAAAGAGG+AGG | + | chr5.1:17728425-17728444 | None:intergenic | 25.0% |
| ! | TGTTGAGAAAGTAAAAATGT+CGG | - | chr5.1:17730434-17730453 | MS.gene72856:intron | 25.0% |
| ! | TTCTTGCATAAGTATTTGTT+TGG | - | chr5.1:17730744-17730763 | MS.gene72856:intron | 25.0% |
| !! | AAGGATTACTATTTTCTGAA+AGG | + | chr5.1:17730840-17730859 | None:intergenic | 25.0% |
| !! | ATAGCTAATTTTCTACTTGT+AGG | + | chr5.1:17727299-17727318 | None:intergenic | 25.0% |
| !! | ATGTGAGTGTTGTAAATATT+TGG | + | chr5.1:17730035-17730054 | None:intergenic | 25.0% |
| !! | CTTTTTCTCTTAAAAATGGT+GGG | - | chr5.1:17727234-17727253 | MS.gene72856:intron | 25.0% |
| !! | TACAATCTATAGTTAGTTTC+AGG | - | chr5.1:17729881-17729900 | MS.gene72856:intron | 25.0% |
| !! | TGCTAATAAAGCACTAAAAT+TGG | - | chr5.1:17729301-17729320 | MS.gene72856:intron | 25.0% |
| !! | TTTTTACAAGTAGTGAAGAT+AGG | + | chr5.1:17729801-17729820 | None:intergenic | 25.0% |
| !!! | ACTTTTTCTCTTAAAAATGG+TGG | - | chr5.1:17727233-17727252 | MS.gene72856:intron | 25.0% |
| !!! | CCTTCATTTTTTCAAGATTT+TGG | - | chr5.1:17730408-17730427 | MS.gene72856:intron | 25.0% |
| !!! | CTTAAATTGGAAGTTGATTT+TGG | - | chr5.1:17729849-17729868 | MS.gene72856:intron | 25.0% |
| !!! | GGAAAAAACTGATTTTTACA+AGG | + | chr5.1:17730312-17730331 | None:intergenic | 25.0% |
| !!! | TGAAACATTTTGGTCTTATT+TGG | - | chr5.1:17728841-17728860 | MS.gene72856:intron | 25.0% |
| !!! | TTTCTTTTTTTAGGCACAAA+TGG | - | chr5.1:17727791-17727810 | MS.gene72856:CDS | 25.0% |
| AAACTGAAATATATAGGACC+TGG | + | chr5.1:17729536-17729555 | None:intergenic | 30.0% | |
| AAGCTTATATAGTGGCATAA+AGG | + | chr5.1:17729056-17729075 | None:intergenic | 30.0% | |
| AATAAGCTGAAAACAGCTTA+TGG | - | chr5.1:17729003-17729022 | MS.gene72856:intron | 30.0% | |
| AATGTAATACACAGTTTCCA+TGG | + | chr5.1:17730932-17730951 | None:intergenic | 30.0% | |
| ACAGAAAATTGTGGTCAAAT+AGG | - | chr5.1:17729175-17729194 | MS.gene72856:intron | 30.0% | |
| ACCAGGAAACTGAAATATAT+AGG | + | chr5.1:17729542-17729561 | None:intergenic | 30.0% | |
| ACTAATTATATCACAGGTGA+TGG | - | chr5.1:17729611-17729630 | MS.gene72856:intron | 30.0% | |
| AGGTATCAAAGATGAGATAT+TGG | - | chr5.1:17730783-17730802 | MS.gene72856:intron | 30.0% | |
| ATAAAACAAGCCGAAGAAAA+TGG | - | chr5.1:17728371-17728390 | MS.gene72856:intron | 30.0% | |
| ATAAGCTGAAAACAGCTTAT+GGG | - | chr5.1:17729004-17729023 | MS.gene72856:intron | 30.0% | |
| ATACCGAATGAAAAGATAGT+GGG | - | chr5.1:17728223-17728242 | MS.gene72856:intron | 30.0% | |
| ATATGAGCATCCATTATGAT+CGG | - | chr5.1:17729938-17729957 | MS.gene72856:intron | 30.0% | |
| ATGCTTGTCATGTGATAATT+TGG | - | chr5.1:17731044-17731063 | MS.gene72856:CDS | 30.0% | |
| ATTTAAGTGAAAGAAAAGCG+AGG | + | chr5.1:17729836-17729855 | None:intergenic | 30.0% | |
| CATCTCACTAATTATATCAC+AGG | - | chr5.1:17729605-17729624 | MS.gene72856:intron | 30.0% | |
| GATATGTATGCAGTGAAATT+TGG | - | chr5.1:17731088-17731107 | MS.gene72856:CDS | 30.0% | |
| GGTATCAAAGATGAGATATT+GGG | - | chr5.1:17730784-17730803 | MS.gene72856:intron | 30.0% | |
| GTATTAGGGTATGTTTGAAT+TGG | + | chr5.1:17728631-17728650 | None:intergenic | 30.0% | |
| GTCAAATTGTGTATAAGCTA+TGG | - | chr5.1:17728965-17728984 | MS.gene72856:intron | 30.0% | |
| GTTTCATGAACATATCTTAC+TGG | - | chr5.1:17728393-17728412 | MS.gene72856:intron | 30.0% | |
| TAAAGATAACAGAGGAAGTT+TGG | + | chr5.1:17730526-17730545 | None:intergenic | 30.0% | |
| TACCCATATTTCAATGTCAA+CGG | - | chr5.1:17730495-17730514 | MS.gene72856:intron | 30.0% | |
| TACCGTTGACATTGAAATAT+GGG | + | chr5.1:17730500-17730519 | None:intergenic | 30.0% | |
| TATACCGAATGAAAAGATAG+TGG | - | chr5.1:17728222-17728241 | MS.gene72856:intron | 30.0% | |
| TCAGAGTAATCAAAAGGAAA+AGG | + | chr5.1:17727377-17727396 | None:intergenic | 30.0% | |
| TCATATCATATGCTATGAGT+AGG | + | chr5.1:17729924-17729943 | None:intergenic | 30.0% | |
| TCATTTCATCAAGGAATACT+GGG | + | chr5.1:17729770-17729789 | None:intergenic | 30.0% | |
| TCCTATATATTTCAGTTTCC+TGG | - | chr5.1:17729538-17729557 | MS.gene72856:intron | 30.0% | |
| TCGTATACTACAGAAAATTG+TGG | - | chr5.1:17729166-17729185 | MS.gene72856:intron | 30.0% | |
| TGCTTGTCATGTGATAATTT+GGG | - | chr5.1:17731045-17731064 | MS.gene72856:CDS | 30.0% | |
| TTCATTTCATCAAGGAATAC+TGG | + | chr5.1:17729771-17729790 | None:intergenic | 30.0% | |
| TTGCATAAGTATTTGTTTGG+TGG | - | chr5.1:17730747-17730766 | MS.gene72856:intron | 30.0% | |
| TTGTTAATACCGTTGAAGAT+GGG | + | chr5.1:17727122-17727141 | None:intergenic | 30.0% | |
| ! | AAAATTGGTTTATTTCCGAC+AGG | - | chr5.1:17729316-17729335 | MS.gene72856:intron | 30.0% |
| ! | AGAGTCTTATCTAATCAATG+TGG | - | chr5.1:17728445-17728464 | MS.gene72856:intron | 30.0% |
| ! | CGCTTTTCTTTCACTTAAAT+TGG | - | chr5.1:17729836-17729855 | MS.gene72856:intron | 30.0% |
| ! | CTGATTGAAGACATTTTTGA+AGG | + | chr5.1:17727165-17727184 | None:intergenic | 30.0% |
| ! | GAGTCTTATCTAATCAATGT+GGG | - | chr5.1:17728446-17728465 | MS.gene72856:intron | 30.0% |
| ! | GTTCATGAAACCATTTTCTT+CGG | + | chr5.1:17728384-17728403 | None:intergenic | 30.0% |
| ! | TAGCTGCATAATTTTGCAAA+AGG | + | chr5.1:17730708-17730727 | None:intergenic | 30.0% |
| ! | TATTTCAGAAATGCTTGTTG+TGG | - | chr5.1:17730594-17730613 | MS.gene72856:intron | 30.0% |
| ! | TCTGTCCAGATTTTAAATTG+CGG | - | chr5.1:17729130-17729149 | MS.gene72856:intron | 30.0% |
| ! | TTGAACATTTAGGTTCTCTT+TGG | - | chr5.1:17727551-17727570 | MS.gene72856:intron | 30.0% |
| !! | AATTTTTCGGAAGAATCTCA+AGG | + | chr5.1:17731310-17731329 | None:intergenic | 30.0% |
| !! | ATTGCTTTTCTGATTCTCTA+GGG | - | chr5.1:17727197-17727216 | MS.gene72856:intron | 30.0% |
| !! | ATTTTTCGGAAGAATCTCAA+GGG | + | chr5.1:17731309-17731328 | None:intergenic | 30.0% |
| !! | TATTGCTTTTCTGATTCTCT+AGG | - | chr5.1:17727196-17727215 | MS.gene72856:intron | 30.0% |
| !! | TGGAAATTCCGCTTTTATTA+TGG | + | chr5.1:17728551-17728570 | None:intergenic | 30.0% |
| !!! | CGAACTGTTTTTTAAAACCT+TGG | - | chr5.1:17729252-17729271 | MS.gene72856:intron | 30.0% |
| !!! | GTTTTTTGATTGCTACAGAT+TGG | - | chr5.1:17727970-17727989 | MS.gene72856:CDS | 30.0% |
| !!! | TTCAGTTTCCTGGTTTTTTA+GGG | - | chr5.1:17729548-17729567 | MS.gene72856:intron | 30.0% |
| !!! | TTTCAGTTTCCTGGTTTTTT+AGG | - | chr5.1:17729547-17729566 | MS.gene72856:intron | 30.0% |
| !!! | TTTGTCTAGTTTTGTAGAGA+TGG | - | chr5.1:17730224-17730243 | MS.gene72856:intron | 30.0% |
| AATTAAGTCCTTATAGCCAG+TGG | - | chr5.1:17727585-17727604 | MS.gene72856:intron | 35.0% | |
| ACATACCCTAATACTTGAAG+AGG | - | chr5.1:17728637-17728656 | MS.gene72856:intron | 35.0% | |
| AGAAGCTCAGAGTAATCAAA+AGG | + | chr5.1:17727383-17727402 | None:intergenic | 35.0% | |
| AGCTACGTTAAGTAGTATGT+GGG | + | chr5.1:17728257-17728276 | None:intergenic | 35.0% | |
| AGTAGACTTTGCAAGACAAT+CGG | - | chr5.1:17730344-17730363 | MS.gene72856:intron | 35.0% | |
| ATGATGAAATCTAGGCTTAG+GGG | + | chr5.1:17729980-17729999 | None:intergenic | 35.0% | |
| CAATTATGACCACAACATCA+TGG | + | chr5.1:17728706-17728725 | None:intergenic | 35.0% | |
| CAATTGTACCCTAAAAAACC+AGG | + | chr5.1:17729559-17729578 | None:intergenic | 35.0% | |
| CATACCCTAATACTTGAAGA+GGG | - | chr5.1:17728638-17728657 | MS.gene72856:intron | 35.0% | |
| CATTGAAAACCATGATGTTG+TGG | - | chr5.1:17728694-17728713 | MS.gene72856:CDS | 35.0% | |
| CTACCGTTGACATTGAAATA+TGG | + | chr5.1:17730501-17730520 | None:intergenic | 35.0% | |
| GAAATATATAGGACCTGGTA+CGG | + | chr5.1:17729531-17729550 | None:intergenic | 35.0% | |
| GAAGGATAACAAACAGCTAA+TGG | - | chr5.1:17729364-17729383 | MS.gene72856:intron | 35.0% | |
| GATGATGAAATCTAGGCTTA+GGG | + | chr5.1:17729981-17730000 | None:intergenic | 35.0% | |
| GCTTATTTAAGCTTACCTAG+AGG | + | chr5.1:17728609-17728628 | None:intergenic | 35.0% | |
| GGTGATATCTAGACTCTATT+TGG | - | chr5.1:17731109-17731128 | MS.gene72856:CDS | 35.0% | |
| GGTTGTACATCAATTACAAC+TGG | + | chr5.1:17730291-17730310 | None:intergenic | 35.0% | |
| GTTGACATTGAAATATGGGT+AGG | + | chr5.1:17730496-17730515 | None:intergenic | 35.0% | |
| GTTGTTAATACCGTTGAAGA+TGG | + | chr5.1:17727123-17727142 | None:intergenic | 35.0% | |
| TAATACACAGTTTCCATGGA+AGG | + | chr5.1:17730928-17730947 | None:intergenic | 35.0% | |
| TAATGCCTGATGTAGTAAGA+AGG | - | chr5.1:17729200-17729219 | MS.gene72856:intron | 35.0% | |
| TACCGAATGAAAAGATAGTG+GGG | - | chr5.1:17728224-17728243 | MS.gene72856:intron | 35.0% | |
| TAGTTGTATCAGTGTTGTGT+AGG | - | chr5.1:17727500-17727519 | MS.gene72856:CDS | 35.0% | |
| TCCTTGATGAAATGAAAAGG+AGG | - | chr5.1:17729775-17729794 | MS.gene72856:intron | 35.0% | |
| TTACAAGTGTTTATGCCTCT+AGG | - | chr5.1:17728591-17728610 | MS.gene72856:intron | 35.0% | |
| TTGCGAATCACTGAAAACAA+TGG | - | chr5.1:17730072-17730091 | MS.gene72856:intron | 35.0% | |
| ! | AGCCAGAAACTTTTAGTAGT+GGG | - | chr5.1:17727611-17727630 | MS.gene72856:intron | 35.0% |
| ! | CGGAAACTGATCATTTTCAA+TGG | - | chr5.1:17730652-17730671 | MS.gene72856:intron | 35.0% |
| ! | GTTTTATAGCTCTCAACGAT+AGG | + | chr5.1:17728358-17728377 | None:intergenic | 35.0% |
| ! | TATTGATGGACAAAAGCAGT+TGG | - | chr5.1:17727473-17727492 | MS.gene72856:CDS | 35.0% |
| !! | AATGGTGGGTTTATCAGAAT+TGG | - | chr5.1:17727248-17727267 | MS.gene72856:intron | 35.0% |
| !! | AGTTTCTGGTTCATGATTAC+TGG | - | chr5.1:17730564-17730583 | MS.gene72856:intron | 35.0% |
| !! | ATTTTATGTAGGTGCTATCC+AGG | - | chr5.1:17731197-17731216 | MS.gene72856:intron | 35.0% |
| !! | GCAAGCTTTGGATAAAAGAA+CGG | + | chr5.1:17730883-17730902 | None:intergenic | 35.0% |
| !! | TAGCTGTTTGTTATCCTTCA+TGG | + | chr5.1:17729363-17729382 | None:intergenic | 35.0% |
| !! | TTGGTGGTGATTAAGAAATG+AGG | - | chr5.1:17730763-17730782 | MS.gene72856:intron | 35.0% |
| !! | TTTTGATTACTCTGAGCTTC+TGG | - | chr5.1:17727382-17727401 | MS.gene72856:intron | 35.0% |
| !!! | GGAAGTTGATTTTGGTTACA+AGG | - | chr5.1:17729857-17729876 | MS.gene72856:intron | 35.0% |
| AAAAATGTCGGACAGAGTGA+AGG | - | chr5.1:17730446-17730465 | MS.gene72856:intron | 40.0% | |
| AAACAATGGACGGAAGTTTC+TGG | - | chr5.1:17730550-17730569 | MS.gene72856:intron | 40.0% | |
| AACACCAACTAAGATGTCGA+GGG | - | chr5.1:17728129-17728148 | MS.gene72856:intron | 40.0% | |
| AAGCCTAGATTTCATCATCG+AGG | - | chr5.1:17729982-17730001 | MS.gene72856:intron | 40.0% | |
| AAGCGCTAATGCTATAAGCA+GGG | + | chr5.1:17728283-17728302 | None:intergenic | 40.0% | |
| ACGAATCAATTGCATGCTTC+CGG | + | chr5.1:17729657-17729676 | None:intergenic | 40.0% | |
| AGTAGATTCACTCCTCAGTT+TGG | + | chr5.1:17729444-17729463 | None:intergenic | 40.0% | |
| AGTTTCCATGGAAGGTAGAA+AGG | + | chr5.1:17730920-17730939 | None:intergenic | 40.0% | |
| ATATGTCTGTCTACATCAGC+AGG | - | chr5.1:17731256-17731275 | MS.gene72856:intron | 40.0% | |
| CATCCTCGATGATGAAATCT+AGG | + | chr5.1:17729988-17730007 | None:intergenic | 40.0% | |
| CGATGATGAAATCTAGGCTT+AGG | + | chr5.1:17729982-17730001 | None:intergenic | 40.0% | |
| CTACTTGTAGGTACCATTGA+AGG | + | chr5.1:17727287-17727306 | None:intergenic | 40.0% | |
| CTTAAAAGAAGCTCCACTGA+AGG | + | chr5.1:17730370-17730389 | None:intergenic | 40.0% | |
| GAAATTGACCGTATCAGATC+TGG | - | chr5.1:17730676-17730695 | MS.gene72856:intron | 40.0% | |
| GAGCTACGTTAAGTAGTATG+TGG | + | chr5.1:17728258-17728277 | None:intergenic | 40.0% | |
| GAGGGTGGAATTTATAGTTG+TGG | - | chr5.1:17728656-17728675 | MS.gene72856:intron | 40.0% | |
| GGGTAATCTTGATCCATTCA+AGG | + | chr5.1:17730859-17730878 | None:intergenic | 40.0% | |
| GTGCACATGATAGAAAACCA+AGG | + | chr5.1:17729272-17729291 | None:intergenic | 40.0% | |
| GTGGGTTTATCAGAATTGGA+GGG | - | chr5.1:17727252-17727271 | MS.gene72856:intron | 40.0% | |
| TAAGCGCTAATGCTATAAGC+AGG | + | chr5.1:17728284-17728303 | None:intergenic | 40.0% | |
| TAATACCGTTGAAGATGGGA+GGG | + | chr5.1:17727118-17727137 | None:intergenic | 40.0% | |
| TCATGCCTTCTTACTACATC+AGG | + | chr5.1:17729208-17729227 | None:intergenic | 40.0% | |
| TCCACCCTCTTCAAGTATTA+GGG | + | chr5.1:17728645-17728664 | None:intergenic | 40.0% | |
| TGTTCTTCTGTTTCAGCTTC+TGG | - | chr5.1:17727320-17727339 | MS.gene72856:intron | 40.0% | |
| TTAATACCGTTGAAGATGGG+AGG | + | chr5.1:17727119-17727138 | None:intergenic | 40.0% | |
| TTCCACCCTCTTCAAGTATT+AGG | + | chr5.1:17728646-17728665 | None:intergenic | 40.0% | |
| TTCGTAAGTTCAGCAAGCTT+TGG | + | chr5.1:17730895-17730914 | None:intergenic | 40.0% | |
| ! | AAGTCTACTTCGTTAGCTTC+TGG | + | chr5.1:17730333-17730352 | None:intergenic | 40.0% |
| ! | ACCGAATGAAAAGATAGTGG+GGG | - | chr5.1:17728225-17728244 | MS.gene72856:intron | 40.0% |
| ! | ACTGGGAGCATAAAGAAGAA+TGG | + | chr5.1:17729753-17729772 | None:intergenic | 40.0% |
| ! | ATGTAGTGCACCGATCATAA+TGG | + | chr5.1:17729951-17729970 | None:intergenic | 40.0% |
| ! | CACAGCCGCAATTTAAAATC+TGG | + | chr5.1:17729138-17729157 | None:intergenic | 40.0% |
| ! | CCAGAAACTTTTAGTAGTGG+GGG | - | chr5.1:17727613-17727632 | MS.gene72856:intron | 40.0% |
| ! | CGTGATTTTCTCTGCAGAAA+TGG | + | chr5.1:17729696-17729715 | None:intergenic | 40.0% |
| ! | CGTGTAATAGAGCACTACAA+TGG | - | chr5.1:17728758-17728777 | MS.gene72856:CDS | 40.0% |
| ! | GAGCCAGAAACTTTTAGTAG+TGG | - | chr5.1:17727610-17727629 | MS.gene72856:intron | 40.0% |
| ! | GCCAGAAACTTTTAGTAGTG+GGG | - | chr5.1:17727612-17727631 | MS.gene72856:intron | 40.0% |
| ! | GCCTCCTTTTCATTTCATCA+AGG | + | chr5.1:17729779-17729798 | None:intergenic | 40.0% |
| ! | GCGATAGAGGAATACTTTTC+AGG | - | chr5.1:17730968-17730987 | MS.gene72856:intron | 40.0% |
| ! | GCTTTGGATAAAAGAACGGT+GGG | + | chr5.1:17730879-17730898 | None:intergenic | 40.0% |
| ! | GTAATAGAGCACTACAATGG+AGG | - | chr5.1:17728761-17728780 | MS.gene72856:CDS | 40.0% |
| ! | TACTCTTCGAAAGAGCATGT+TGG | + | chr5.1:17728571-17728590 | None:intergenic | 40.0% |
| ! | TATATCACAGGTGATGGTGA+AGG | - | chr5.1:17729617-17729636 | MS.gene72856:intron | 40.0% |
| ! | TTTTCTCTGCAGAAATGGAG+AGG | + | chr5.1:17729691-17729710 | None:intergenic | 40.0% |
| !! | AGCTTTGGATAAAAGAACGG+TGG | + | chr5.1:17730880-17730899 | None:intergenic | 40.0% |
| !! | AGGGAAGAGGGTGTTATTAT+TGG | + | chr5.1:17727099-17727118 | None:intergenic | 40.0% |
| !! | CAGTGGAGCTTCTTTTAAGT+TGG | - | chr5.1:17730371-17730390 | MS.gene72856:intron | 40.0% |
| AAGCAGTCGTGAACACTGAA+CGG | - | chr5.1:17730632-17730651 | MS.gene72856:intron | 45.0% | |
| AAGTTGCACACTCCAAACTG+AGG | - | chr5.1:17729429-17729448 | MS.gene72856:intron | 45.0% | |
| AATTTCAAGGGTCGCGATAG+AGG | - | chr5.1:17730955-17730974 | MS.gene72856:intron | 45.0% | |
| ACCCTAATACTTGAAGAGGG+TGG | - | chr5.1:17728641-17728660 | MS.gene72856:intron | 45.0% | |
| ACGTTAAGTAGTATGTGGGC+TGG | + | chr5.1:17728253-17728272 | None:intergenic | 45.0% | |
| ATTAAATCCACCCCCCTCAA+AGG | - | chr5.1:17728469-17728488 | MS.gene72856:intron | 45.0% | |
| ATTCTTCTCAGGACCTTCCA+GGG | + | chr5.1:17731224-17731243 | None:intergenic | 45.0% | |
| CAACACCAACTAAGATGTCG+AGG | - | chr5.1:17728128-17728147 | MS.gene72856:intron | 45.0% | |
| CCCCCACTACTAAAAGTTTC+TGG | + | chr5.1:17727616-17727635 | None:intergenic | 45.0% | |
| GAAAAACCTTGATGTCGCAG+TGG | - | chr5.1:17729226-17729245 | MS.gene72856:intron | 45.0% | |
| GAAGGTGGAATAGAGATGAC+CGG | - | chr5.1:17729635-17729654 | MS.gene72856:intron | 45.0% | |
| GAAGTCCTTTCTACCTTCCA+TGG | - | chr5.1:17730912-17730931 | MS.gene72856:intron | 45.0% | |
| GGATACAGCCAGATCTGATA+CGG | + | chr5.1:17730687-17730706 | None:intergenic | 45.0% | |
| GGCTAAAGTTGCAGTGGAAT+TGG | - | chr5.1:17729337-17729356 | MS.gene72856:intron | 45.0% | |
| TAAGTCCTTATAGCCAGTGG+CGG | - | chr5.1:17727588-17727607 | MS.gene72856:intron | 45.0% | |
| TACTACTCCCCATTCTTCTC+AGG | + | chr5.1:17731235-17731254 | None:intergenic | 45.0% | |
| TGGAAGGTCCTGAGAAGAAT+GGG | - | chr5.1:17731224-17731243 | MS.gene72856:intron | 45.0% | |
| TTGCCTTGTGTTGCCTTTGA+GGG | + | chr5.1:17728485-17728504 | None:intergenic | 45.0% | |
| ! | AGAGCACTACAATGGAGGTT+TGG | - | chr5.1:17728766-17728785 | MS.gene72856:CDS | 45.0% |
| ! | AGGGCAACTTCTTTGAGAGA+TGG | + | chr5.1:17731290-17731309 | None:intergenic | 45.0% |
| ! | CTCGACATCTTAGTTGGTGT+TGG | + | chr5.1:17728130-17728149 | None:intergenic | 45.0% |
| ! | GCCCCCACTATCTTTTCATT+CGG | + | chr5.1:17728229-17728248 | None:intergenic | 45.0% |
| ! | GGTGGGTTTATCAGAATTGG+AGG | - | chr5.1:17727251-17727270 | MS.gene72856:intron | 45.0% |
| ! | TTTTATTATGGTCCGCCCCT+AGG | + | chr5.1:17728539-17728558 | None:intergenic | 45.0% |
| !! | GATTCTCTAGGGTCTCAAGT+TGG | - | chr5.1:17727208-17727227 | MS.gene72856:intron | 45.0% |
| AACCCAATTCCACCCCTCAA+AGG | - | chr5.1:17728503-17728522 | MS.gene72856:intron | 50.0% | |
| AGGGATCACTGCTCCTTCAA+TGG | - | chr5.1:17727271-17727290 | MS.gene72856:intron | 50.0% | |
| CATTCTTCTCAGGACCTTCC+AGG | + | chr5.1:17731225-17731244 | None:intergenic | 50.0% | |
| CCACTGCAACTTTAGCCTGT+CGG | + | chr5.1:17729334-17729353 | None:intergenic | 50.0% | |
| CGCTAATGCTATAAGCAGGG+CGG | + | chr5.1:17728280-17728299 | None:intergenic | 50.0% | |
| CTCTTCCCTCCCATCTTCAA+CGG | - | chr5.1:17727110-17727129 | MS.gene72856:CDS | 50.0% | |
| CTGGAAGGTCCTGAGAAGAA+TGG | - | chr5.1:17731223-17731242 | MS.gene72856:intron | 50.0% | |
| GAGATTGAGTTTCCCACAGC+TGG | - | chr5.1:17729497-17729516 | MS.gene72856:intron | 50.0% | |
| GGAAGGTCCTGAGAAGAATG+GGG | - | chr5.1:17731225-17731244 | MS.gene72856:intron | 50.0% | |
| GGGGCGGACCATAATAAAAG+CGG | - | chr5.1:17728540-17728559 | MS.gene72856:intron | 50.0% | |
| GTTGAAGATGGGAGGGAAGA+GGG | + | chr5.1:17727111-17727130 | None:intergenic | 50.0% | |
| GTTGCCTTGTGTTGCCTTTG+AGG | + | chr5.1:17728486-17728505 | None:intergenic | 50.0% | |
| TCTGTTTCAGCTTCTGGCGA+TGG | - | chr5.1:17727326-17727345 | MS.gene72856:intron | 50.0% | |
| TGCAGTGGAATTGGCCATGA+AGG | - | chr5.1:17729346-17729365 | MS.gene72856:intron | 50.0% | |
| TGCCTTGTGTTGCCTTTGAG+GGG | + | chr5.1:17728484-17728503 | None:intergenic | 50.0% | |
| TTCGCAATTGACAACGCAGC+AGG | + | chr5.1:17730059-17730078 | None:intergenic | 50.0% | |
| ! | ATCACAGGTGATGGTGAAGG+TGG | - | chr5.1:17729620-17729639 | MS.gene72856:intron | 50.0% |
| ! | TGCCTTTGAGGGGTGGAATT+GGG | + | chr5.1:17728508-17728527 | None:intergenic | 50.0% |
| ! | TTGCCTTTGAGGGGTGGAAT+TGG | + | chr5.1:17728509-17728528 | None:intergenic | 50.0% |
| AAAGGCAACACAGGGCCTAG+GGG | - | chr5.1:17728521-17728540 | MS.gene72856:intron | 55.0% | |
| ACGGATTCGAGTCCAGCTGT+GGG | + | chr5.1:17729512-17729531 | None:intergenic | 55.0% | |
| AGGCCCTGTGTTGCCTTTGA+GGG | + | chr5.1:17728519-17728538 | None:intergenic | 55.0% | |
| CAAAGGCAACACAGGGCCTA+GGG | - | chr5.1:17728520-17728539 | MS.gene72856:intron | 55.0% | |
| CACCCCTCAAAGGCAACACA+GGG | - | chr5.1:17728513-17728532 | MS.gene72856:intron | 55.0% | |
| CCGACAGGCTAAAGTTGCAG+TGG | - | chr5.1:17729331-17729350 | MS.gene72856:intron | 55.0% | |
| CGTTGAAGATGGGAGGGAAG+AGG | + | chr5.1:17727112-17727131 | None:intergenic | 55.0% | |
| GCAAGACAATCGGCCTTCAG+TGG | - | chr5.1:17730354-17730373 | MS.gene72856:intron | 55.0% | |
| GCAGCCCTCGACATCTTAGT+TGG | + | chr5.1:17728136-17728155 | None:intergenic | 55.0% | |
| TACGGATTCGAGTCCAGCTG+TGG | + | chr5.1:17729513-17729532 | None:intergenic | 55.0% | |
| TAGGCCCTGTGTTGCCTTTG+AGG | + | chr5.1:17728520-17728539 | None:intergenic | 55.0% | |
| TCAAAGGCAACACAGGGCCT+AGG | - | chr5.1:17728519-17728538 | MS.gene72856:intron | 55.0% | |
| TCGCAACCACTGCGACATCA+AGG | + | chr5.1:17729235-17729254 | None:intergenic | 55.0% | |
| ! | CCTTGTGTTGCCTTTGAGGG+GGG | + | chr5.1:17728482-17728501 | None:intergenic | 55.0% |
| ! | GCCTTGTGTTGCCTTTGAGG+GGG | + | chr5.1:17728483-17728502 | None:intergenic | 55.0% |
| !! | AAAGTTTCTGGCTCCGCCAC+TGG | + | chr5.1:17727604-17727623 | None:intergenic | 55.0% |
| CCACCCCTCAAAGGCAACAC+AGG | - | chr5.1:17728512-17728531 | MS.gene72856:intron | 60.0% | |
| CCCCCCTCAAAGGCAACACA+AGG | - | chr5.1:17728479-17728498 | MS.gene72856:intron | 60.0% | |
| GCTGGACTCGAATCCGTACC+AGG | - | chr5.1:17729515-17729534 | MS.gene72856:intron | 60.0% | |
| GGCCCTGTGTTGCCTTTGAG+GGG | + | chr5.1:17728518-17728537 | None:intergenic | 60.0% | |
| GTCGGACAGAGTGAAGGCAG+AGG | - | chr5.1:17730452-17730471 | MS.gene72856:intron | 60.0% | |
| GTGCTATCCAGGACCCTGGA+AGG | - | chr5.1:17731208-17731227 | MS.gene72856:intron | 60.0% | |
| TGTCGAGGGCTGCAACTGCA+CGG | - | chr5.1:17728143-17728162 | MS.gene72856:intron | 60.0% | |
| ! | CCTGTGTTGCCTTTGAGGGG+TGG | + | chr5.1:17728515-17728534 | None:intergenic | 60.0% |
| ! | GTAGGTGCTATCCAGGACCC+TGG | - | chr5.1:17731204-17731223 | MS.gene72856:intron | 60.0% |
| ! | TGGCTCCGCCACTGGCTATA+AGG | + | chr5.1:17727596-17727615 | None:intergenic | 60.0% |
| ! | TGTGTTGCCTTTGAGGGGGG+TGG | + | chr5.1:17728479-17728498 | None:intergenic | 60.0% |
| CTCAGGACCTTCCAGGGTCC+TGG | + | chr5.1:17731218-17731237 | None:intergenic | 65.0% | |
| GGCAACACAGGGCCTAGGGG+CGG | - | chr5.1:17728524-17728543 | MS.gene72856:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 17727081 | 17731331 | 17727081 | ID=MS.gene72856 |
| chr5.1 | mRNA | 17727081 | 17731331 | 17727081 | ID=MS.gene72856.t1;Parent=MS.gene72856 |
| chr5.1 | exon | 17731281 | 17731331 | 17731281 | ID=MS.gene72856.t1.exon1;Parent=MS.gene72856.t1 |
| chr5.1 | CDS | 17731281 | 17731331 | 17731281 | ID=cds.MS.gene72856.t1;Parent=MS.gene72856.t1 |
| chr5.1 | exon | 17731003 | 17731194 | 17731003 | ID=MS.gene72856.t1.exon2;Parent=MS.gene72856.t1 |
| chr5.1 | CDS | 17731003 | 17731194 | 17731003 | ID=cds.MS.gene72856.t1;Parent=MS.gene72856.t1 |
| chr5.1 | exon | 17729027 | 17729074 | 17729027 | ID=MS.gene72856.t1.exon3;Parent=MS.gene72856.t1 |
| chr5.1 | CDS | 17729027 | 17729074 | 17729027 | ID=cds.MS.gene72856.t1;Parent=MS.gene72856.t1 |
| chr5.1 | exon | 17728876 | 17728915 | 17728876 | ID=MS.gene72856.t1.exon4;Parent=MS.gene72856.t1 |
| chr5.1 | CDS | 17728876 | 17728915 | 17728876 | ID=cds.MS.gene72856.t1;Parent=MS.gene72856.t1 |
| chr5.1 | exon | 17728685 | 17728785 | 17728685 | ID=MS.gene72856.t1.exon5;Parent=MS.gene72856.t1 |
| chr5.1 | CDS | 17728685 | 17728785 | 17728685 | ID=cds.MS.gene72856.t1;Parent=MS.gene72856.t1 |
| chr5.1 | exon | 17727896 | 17728088 | 17727896 | ID=MS.gene72856.t1.exon6;Parent=MS.gene72856.t1 |
| chr5.1 | CDS | 17727896 | 17728088 | 17727896 | ID=cds.MS.gene72856.t1;Parent=MS.gene72856.t1 |
| chr5.1 | exon | 17727712 | 17727810 | 17727712 | ID=MS.gene72856.t1.exon7;Parent=MS.gene72856.t1 |
| chr5.1 | CDS | 17727712 | 17727810 | 17727712 | ID=cds.MS.gene72856.t1;Parent=MS.gene72856.t1 |
| chr5.1 | exon | 17727423 | 17727540 | 17727423 | ID=MS.gene72856.t1.exon8;Parent=MS.gene72856.t1 |
| chr5.1 | CDS | 17727423 | 17727540 | 17727423 | ID=cds.MS.gene72856.t1;Parent=MS.gene72856.t1 |
| chr5.1 | exon | 17727081 | 17727204 | 17727081 | ID=MS.gene72856.t1.exon9;Parent=MS.gene72856.t1 |
| chr5.1 | CDS | 17727081 | 17727204 | 17727081 | ID=cds.MS.gene72856.t1;Parent=MS.gene72856.t1 |
| Gene Sequence |
| Protein sequence |
