Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0141820 | XP_003602970.1 | 97.887 | 568 | 12 | 0 | 1 | 568 | 1 | 568 | 0.0 | 1151 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0141820 | sp|Q8VYE4|PTR12_ARATH | 45.304 | 543 | 279 | 7 | 16 | 549 | 27 | 560 | 2.16e-156 | 462 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0141820 | G7J5Q5 | 97.887 | 568 | 12 | 0 | 1 | 568 | 1 | 568 | 0.0 | 1151 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006080 | Msa0141820 | 0.816629 | 5.011686e-52 | -8.615850e-47 |
| Msa0013270 | Msa0141820 | 0.816698 | 4.837078e-52 | -8.615850e-47 |
| Msa0024650 | Msa0141820 | 0.819017 | 1.448236e-52 | -8.615850e-47 |
| Msa0025570 | Msa0141820 | 0.808556 | 2.922850e-50 | -8.615850e-47 |
| Msa0045810 | Msa0141820 | 0.825581 | 4.336360e-54 | -8.615850e-47 |
| Msa0046200 | Msa0141820 | 0.802206 | 6.262936e-49 | -8.615850e-47 |
| Msa0060410 | Msa0141820 | 0.804453 | 2.144643e-49 | -8.615850e-47 |
| Msa0062190 | Msa0141820 | 0.803055 | 4.184908e-49 | -8.615850e-47 |
| Msa0072180 | Msa0141820 | 0.805296 | 1.429291e-49 | -8.615850e-47 |
| Msa0073110 | Msa0141820 | 0.834537 | 2.831232e-56 | -8.615850e-47 |
| Msa0087900 | Msa0141820 | 0.811119 | 8.209589e-51 | -8.615850e-47 |
| Msa0092220 | Msa0141820 | 0.803952 | 2.726198e-49 | -8.615850e-47 |
| Msa0106540 | Msa0141820 | 0.812187 | 4.810622e-51 | -8.615850e-47 |
| Msa0120450 | Msa0141820 | 0.821584 | 3.736695e-53 | -8.615850e-47 |
| Msa0121320 | Msa0141820 | 0.812132 | 4.943906e-51 | -8.615850e-47 |
| Msa0141820 | Msa0163690 | 0.815053 | 1.125913e-51 | -8.615850e-47 |
| Msa0141820 | Msa0166180 | 0.800179 | 1.627566e-48 | -8.615850e-47 |
| Msa0141820 | Msa0189990 | 0.802253 | 6.125783e-49 | -8.615850e-47 |
| Msa0141820 | Msa0216150 | -0.808872 | 2.501577e-50 | -8.615850e-47 |
| Msa0141820 | Msa0218500 | 0.807426 | 5.084719e-50 | -8.615850e-47 |
| Msa0141820 | Msa0224870 | 0.822603 | 2.168981e-53 | -8.615850e-47 |
| Msa0141820 | Msa0232060 | 0.806470 | 8.098299e-50 | -8.615850e-47 |
| Msa0141820 | Msa0234150 | 0.817648 | 2.956882e-52 | -8.615850e-47 |
| Msa0141820 | Msa0242720 | 0.810757 | 9.834828e-51 | -8.615850e-47 |
| Msa0141820 | Msa0247780 | 0.804669 | 1.933515e-49 | -8.615850e-47 |
| Msa0141820 | Msa0248320 | 0.827012 | 1.978289e-54 | -8.615850e-47 |
| Msa0141820 | Msa0258260 | 0.800400 | 1.467424e-48 | -8.615850e-47 |
| Msa0141820 | Msa0265650 | 0.809755 | 1.617916e-50 | -8.615850e-47 |
| Msa0141820 | Msa0287480 | 0.815662 | 8.240276e-52 | -8.615850e-47 |
| Msa0141820 | Msa0294200 | 0.806310 | 8.755016e-50 | -8.615850e-47 |
| Msa0141820 | Msa0298000 | 0.821653 | 3.601363e-53 | -8.615850e-47 |
| Msa0141820 | Msa0303900 | 0.835300 | 1.818476e-56 | -8.615850e-47 |
| Msa0141820 | Msa0318490 | 0.830563 | 2.736684e-55 | -8.615850e-47 |
| Msa0141820 | Msa0325260 | 0.802020 | 6.838250e-49 | -8.615850e-47 |
| Msa0141820 | Msa0333770 | 0.860264 | 2.331423e-63 | -8.615850e-47 |
| Msa0141820 | Msa0354550 | 0.807881 | 4.069091e-50 | -8.615850e-47 |
| Msa0141820 | Msa0354600 | 0.812236 | 4.692323e-51 | -8.615850e-47 |
| Msa0141820 | Msa0358470 | 0.820967 | 5.183737e-53 | -8.615850e-47 |
| Msa0141820 | Msa0364030 | -0.802470 | 5.525292e-49 | -8.615850e-47 |
| Msa0141820 | Msa0374470 | 0.805079 | 1.586814e-49 | -8.615850e-47 |
| Msa0141820 | Msa0374600 | 0.804978 | 1.665998e-49 | -8.615850e-47 |
| Msa0141820 | Msa0380110 | 0.930480 | 1.539570e-93 | -8.615850e-47 |
| Msa0141820 | Msa0403740 | -0.803359 | 3.619542e-49 | -8.615850e-47 |
| Msa0141820 | Msa0412580 | -0.807000 | 6.259274e-50 | -8.615850e-47 |
| Msa0141820 | Msa0418230 | 0.833204 | 6.098642e-56 | -8.615850e-47 |
| Msa0141820 | Msa0429450 | 0.979933 | 4.539150e-149 | -8.615850e-47 |
| Msa0141820 | Msa0429600 | 0.993991 | 9.682584e-204 | -8.615850e-47 |
| Msa0141820 | Msa0448190 | 0.804324 | 2.281485e-49 | -8.615850e-47 |
| Msa0141820 | Msa0456450 | -0.804095 | 2.546676e-49 | -8.615850e-47 |
| Msa0141820 | Msa0457070 | -0.815823 | 7.588015e-52 | -8.615850e-47 |
| Msa0141820 | Msa0464620 | 0.828964 | 6.708738e-55 | -8.615850e-47 |
| Msa0141820 | Msa0490060 | 0.801171 | 1.021120e-48 | -8.615850e-47 |
| Msa0141820 | Msa0490100 | 0.820000 | 8.641949e-53 | -8.615850e-47 |
| Msa0141820 | Msa0491780 | 0.813980 | 1.944333e-51 | -8.615850e-47 |
| Msa0141820 | Msa0496070 | 0.822046 | 2.920124e-53 | -8.615850e-47 |
| Msa0141820 | Msa0501080 | 0.925711 | 1.266783e-90 | -8.615850e-47 |
| Msa0141820 | Msa0510050 | 0.822004 | 2.987586e-53 | -8.615850e-47 |
| Msa0141820 | Msa0531050 | 0.820681 | 6.033410e-53 | -8.615850e-47 |
| Msa0141820 | Msa0540640 | 0.807198 | 5.683405e-50 | -8.615850e-47 |
| Msa0141820 | Msa0545680 | 0.807168 | 5.766082e-50 | -8.615850e-47 |
| Msa0141820 | Msa0557250 | 0.814370 | 1.594660e-51 | -8.615850e-47 |
| Msa0141820 | Msa0561110 | 0.803455 | 3.457366e-49 | -8.615850e-47 |
| Msa0141820 | Msa0565180 | 0.800837 | 1.195071e-48 | -8.615850e-47 |
| Msa0141820 | Msa0565700 | 0.815931 | 7.180188e-52 | -8.615850e-47 |
| Msa0141820 | Msa0567330 | 0.831281 | 1.825001e-55 | -8.615850e-47 |
| Msa0141820 | Msa0567570 | 0.814609 | 1.411964e-51 | -8.615850e-47 |
| Msa0141820 | Msa0576320 | 0.825760 | 3.931728e-54 | -8.615850e-47 |
| Msa0141820 | Msa0583390 | 0.809376 | 1.950566e-50 | -8.615850e-47 |
| Msa0141820 | Msa0606600 | 0.842486 | 2.511055e-58 | -8.615850e-47 |
| Msa0141820 | Msa0614960 | 0.805839 | 1.099463e-49 | -8.615850e-47 |
| Msa0141820 | Msa0618680 | 0.825874 | 3.694934e-54 | -8.615850e-47 |
| Msa0141820 | Msa0618700 | 0.844252 | 8.479968e-59 | -8.615850e-47 |
| Msa0141820 | Msa0623420 | 0.965838 | 3.973819e-125 | -8.615850e-47 |
| Msa0141820 | Msa0647300 | 0.849335 | 3.454749e-60 | -8.615850e-47 |
| Msa0141820 | Msa0652600 | 0.800899 | 1.160496e-48 | -8.615850e-47 |
| Msa0141820 | Msa0658150 | 0.827300 | 1.688276e-54 | -8.615850e-47 |
| Msa0141820 | Msa0682110 | 0.817095 | 3.939808e-52 | -8.615850e-47 |
| Msa0141820 | Msa0682160 | 0.825805 | 3.837021e-54 | -8.615850e-47 |
| Msa0141820 | Msa0686830 | 0.857633 | 1.428651e-62 | -8.615850e-47 |
| Msa0141820 | Msa0698280 | 0.821828 | 3.280789e-53 | -8.615850e-47 |
| Msa0141820 | Msa0699170 | 0.820790 | 5.694265e-53 | -8.615850e-47 |
| Msa0141820 | Msa0703000 | 0.826590 | 2.495247e-54 | -8.615850e-47 |
| Msa0141820 | Msa0708680 | 0.831791 | 1.366257e-55 | -8.615850e-47 |
| Msa0141820 | Msa0733560 | 0.806395 | 8.399499e-50 | -8.615850e-47 |
| Msa0141820 | Msa0734080 | 0.804066 | 2.582503e-49 | -8.615850e-47 |
| Msa0141820 | Msa0761950 | 0.822150 | 2.763565e-53 | -8.615850e-47 |
| Msa0141820 | Msa0773030 | 0.825545 | 4.420835e-54 | -8.615850e-47 |
| Msa0141820 | Msa0775350 | 0.802100 | 6.584474e-49 | -8.615850e-47 |
| Msa0141820 | Msa0798840 | 0.832211 | 1.075613e-55 | -8.615850e-47 |
| Msa0141820 | Msa0803880 | 0.808094 | 3.666575e-50 | -8.615850e-47 |
| Msa0141820 | Msa0812720 | 0.824868 | 6.393810e-54 | -8.615850e-47 |
| Msa0141820 | Msa0838210 | 0.808518 | 2.977413e-50 | -8.615850e-47 |
| Msa0141820 | Msa0841930 | 0.808145 | 3.576976e-50 | -8.615850e-47 |
| Msa0141820 | Msa0853080 | 0.804675 | 1.927551e-49 | -8.615850e-47 |
| Msa0141820 | Msa0873880 | 0.802750 | 4.836503e-49 | -8.615850e-47 |
| Msa0141820 | Msa0873940 | 0.814455 | 1.527251e-51 | -8.615850e-47 |
| Msa0141820 | Msa0893220 | 0.802900 | 4.504391e-49 | -8.615850e-47 |
| Msa0141820 | Msa0896920 | 0.816091 | 6.611004e-52 | -8.615850e-47 |
| Msa0141820 | Msa0906680 | 0.810007 | 1.427680e-50 | -8.615850e-47 |
| Msa0141820 | Msa0910170 | 0.805363 | 1.383960e-49 | -8.615850e-47 |
| Msa0141820 | Msa0931680 | 0.820147 | 7.997977e-53 | -8.615850e-47 |
| Msa0141820 | Msa0940780 | 0.808806 | 2.584523e-50 | -8.615850e-47 |
| Msa0141820 | Msa0967780 | 0.800423 | 1.451136e-48 | -8.615850e-47 |
| Msa0141820 | Msa0975950 | 0.815195 | 1.047060e-51 | -8.615850e-47 |
| Msa0141820 | Msa1001120 | 0.813363 | 2.658435e-51 | -8.615850e-47 |
| Msa0141820 | Msa1002820 | 0.800476 | 1.415412e-48 | -8.615850e-47 |
| Msa0141820 | Msa1024480 | 0.812596 | 3.915788e-51 | -8.615850e-47 |
| Msa0141820 | Msa1029820 | 0.804608 | 1.991277e-49 | -8.615850e-47 |
| Msa0141820 | Msa1029860 | 0.814864 | 1.239766e-51 | -8.615850e-47 |
| Msa0141820 | Msa1034950 | 0.813311 | 2.729050e-51 | -8.615850e-47 |
| Msa0141820 | Msa1035050 | 0.809300 | 2.025693e-50 | -8.615850e-47 |
| Msa0141820 | Msa1041250 | 0.805544 | 1.268359e-49 | -8.615850e-47 |
| Msa0141820 | Msa1041910 | 0.821514 | 3.878607e-53 | -8.615850e-47 |
| Msa0141820 | Msa1047300 | 0.804150 | 2.480422e-49 | -8.615850e-47 |
| Msa0141820 | Msa1047340 | 0.804405 | 2.194125e-49 | -8.615850e-47 |
| Msa0141820 | Msa1049400 | 0.812672 | 3.769198e-51 | -8.615850e-47 |
| Msa0141820 | Msa1056890 | 0.811920 | 5.500250e-51 | -8.615850e-47 |
| Msa0141820 | Msa1063210 | 0.816779 | 4.637159e-52 | -8.615850e-47 |
| Msa0141820 | Msa1075010 | 0.813240 | 2.829607e-51 | -8.615850e-47 |
| Msa0141820 | Msa1075090 | 0.811129 | 8.170248e-51 | -8.615850e-47 |
| Msa0141820 | Msa1100330 | 0.827783 | 1.292553e-54 | -8.615850e-47 |
| Msa0141820 | Msa1108560 | 0.818605 | 1.796357e-52 | -8.615850e-47 |
| Msa0141820 | Msa1115980 | 0.810968 | 8.851936e-51 | -8.615850e-47 |
| Msa0141820 | Msa1136630 | 0.828929 | 6.841700e-55 | -8.615850e-47 |
| Msa0141820 | Msa1143250 | 0.827343 | 1.648454e-54 | -8.615850e-47 |
| Msa0141820 | Msa1147010 | 0.822261 | 2.604537e-53 | -8.615850e-47 |
| Msa0141820 | Msa1162430 | 0.817039 | 4.054091e-52 | -8.615850e-47 |
| Msa0141820 | Msa1165460 | 0.823717 | 1.191494e-53 | -8.615850e-47 |
| Msa0141820 | Msa1167960 | 0.825673 | 4.124483e-54 | -8.615850e-47 |
| Msa0141820 | Msa1170340 | 0.809943 | 1.474074e-50 | -8.615850e-47 |
| Msa0141820 | Msa1174280 | 0.806969 | 6.354430e-50 | -8.615850e-47 |
| Msa0141820 | Msa1184680 | 0.813058 | 3.101999e-51 | -8.615850e-47 |
| Msa0141820 | Msa1185270 | 0.800813 | 1.208336e-48 | -8.615850e-47 |
| Msa0141820 | Msa1191350 | 0.828948 | 6.766252e-55 | -8.615850e-47 |
| Msa0141820 | Msa1203650 | 0.815243 | 1.021586e-51 | -8.615850e-47 |
| Msa0141820 | Msa1205360 | 0.803447 | 3.470971e-49 | -8.615850e-47 |
| Msa0141820 | Msa1223960 | 0.829593 | 4.720484e-55 | -8.615850e-47 |
| Msa0141820 | Msa1223990 | 0.813532 | 2.440629e-51 | -8.615850e-47 |
| Msa0141820 | Msa1225890 | 0.805768 | 1.137869e-49 | -8.615850e-47 |
| Msa0141820 | Msa1238250 | 0.827728 | 1.332388e-54 | -8.615850e-47 |
| Msa0141820 | Msa1263110 | 0.830430 | 2.950723e-55 | -8.615850e-47 |
| Msa0141820 | Msa1263120 | 0.807956 | 3.923506e-50 | -8.615850e-47 |
| Msa0141820 | Msa1269200 | 0.800056 | 1.723406e-48 | -8.615850e-47 |
| Msa0141820 | Msa1269500 | 0.882193 | 1.278717e-70 | -8.615850e-47 |
| Msa0141820 | Msa1273320 | 0.800590 | 1.342208e-48 | -8.615850e-47 |
| Msa0141820 | Msa1281780 | 0.805501 | 1.294810e-49 | -8.615850e-47 |
| Msa0141820 | Msa1283600 | 0.801842 | 7.438697e-49 | -8.615850e-47 |
| Msa0141820 | Msa1284020 | 0.850104 | 2.106823e-60 | -8.615850e-47 |
| Msa0141820 | Msa1319030 | 0.832758 | 7.873766e-56 | -8.615850e-47 |
| Msa0141820 | Msa1319190 | 0.834338 | 3.174761e-56 | -8.615850e-47 |
| Msa0141820 | Msa1322500 | 0.819532 | 1.105718e-52 | -8.615850e-47 |
| Msa0141820 | Msa1323070 | 0.809580 | 1.764115e-50 | -8.615850e-47 |
| Msa0141820 | Msa1342360 | -0.804035 | 2.620399e-49 | -8.615850e-47 |
| Msa0141820 | Msa1357840 | 0.826880 | 2.127607e-54 | -8.615850e-47 |
| Msa0141820 | Msa1361980 | 0.810382 | 1.185403e-50 | -8.615850e-47 |
| Msa0141820 | Msa1366480 | 0.802793 | 4.740252e-49 | -8.615850e-47 |
| Msa0141820 | Msa1368930 | 0.802210 | 6.250255e-49 | -8.615850e-47 |
| Msa0141820 | Msa1376880 | 0.824607 | 7.365916e-54 | -8.615850e-47 |
| Msa0141820 | Msa1383220 | 0.802619 | 5.148608e-49 | -8.615850e-47 |
| Msa0141820 | Msa1384130 | 0.822123 | 2.803276e-53 | -8.615850e-47 |
| Msa0141820 | Msa1395080 | 0.825933 | 3.577023e-54 | -8.615850e-47 |
| Msa0141820 | Msa1403660 | 0.801589 | 8.385154e-49 | -8.615850e-47 |
| Msa0141820 | Msa1405830 | 0.807500 | 4.904918e-50 | -8.615850e-47 |
| Msa0141820 | Msa1407810 | 0.824303 | 8.684791e-54 | -8.615850e-47 |
| Msa0141820 | Msa1433040 | 0.811832 | 5.746829e-51 | -8.615850e-47 |
| Msa0141820 | Msa1433360 | 0.822139 | 2.779583e-53 | -8.615850e-47 |
| Msa0141820 | Msa1437780 | 0.823212 | 1.564470e-53 | -8.615850e-47 |
| Msa0141820 | Msa1455360 | 0.826828 | 2.190026e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0141820 | MtrunA17_Chr3g0133341 | 97.887 | 568 | 12 | 0 | 1 | 568 | 1 | 568 | 0.0 | 1151 |
| Msa0141820 | MtrunA17_Chr1g0193391 | 49.470 | 566 | 253 | 8 | 10 | 559 | 11 | 559 | 0.0 | 564 |
| Msa0141820 | MtrunA17_Chr7g0271221 | 50.181 | 552 | 249 | 6 | 14 | 556 | 17 | 551 | 0.0 | 547 |
| Msa0141820 | MtrunA17_Chr2g0284701 | 47.935 | 557 | 266 | 8 | 16 | 550 | 34 | 588 | 0.0 | 531 |
| Msa0141820 | MtrunA17_Chr4g0069581 | 49.432 | 528 | 244 | 4 | 32 | 550 | 4 | 517 | 1.84e-173 | 503 |
| Msa0141820 | MtrunA17_Chr8g0379971 | 44.541 | 577 | 277 | 9 | 13 | 550 | 19 | 591 | 1.82e-164 | 481 |
| Msa0141820 | MtrunA17_Chr8g0379991 | 44.876 | 566 | 260 | 7 | 35 | 550 | 1 | 564 | 5.04e-154 | 453 |
| Msa0141820 | MtrunA17_Chr5g0415961 | 41.103 | 562 | 301 | 7 | 10 | 550 | 20 | 572 | 8.03e-151 | 445 |
| Msa0141820 | MtrunA17_Chr8g0362711 | 41.404 | 570 | 299 | 7 | 10 | 556 | 20 | 577 | 1.51e-146 | 434 |
| Msa0141820 | MtrunA17_Chr2g0276751 | 40.942 | 552 | 293 | 8 | 10 | 550 | 34 | 563 | 6.47e-145 | 431 |
| Msa0141820 | MtrunA17_Chr5g0422881 | 39.539 | 564 | 323 | 6 | 14 | 564 | 20 | 578 | 1.66e-140 | 419 |
| Msa0141820 | MtrunA17_Chr8g0375311 | 37.545 | 554 | 326 | 5 | 10 | 550 | 36 | 582 | 2.24e-131 | 395 |
| Msa0141820 | MtrunA17_Chr4g0005901 | 39.029 | 556 | 316 | 8 | 10 | 552 | 28 | 573 | 1.29e-128 | 388 |
| Msa0141820 | MtrunA17_Chr8g0375291 | 38.321 | 548 | 318 | 5 | 10 | 544 | 36 | 576 | 1.64e-128 | 388 |
| Msa0141820 | MtrunA17_Chr5g0399061 | 36.814 | 565 | 331 | 9 | 11 | 559 | 24 | 578 | 3.39e-128 | 387 |
| Msa0141820 | MtrunA17_Chr7g0261811 | 38.686 | 548 | 324 | 6 | 10 | 549 | 23 | 566 | 7.81e-128 | 387 |
| Msa0141820 | MtrunA17_Chr7g0261881 | 38.251 | 549 | 327 | 6 | 10 | 550 | 23 | 567 | 8.12e-127 | 384 |
| Msa0141820 | MtrunA17_Chr7g0241741 | 38.530 | 558 | 316 | 10 | 10 | 552 | 18 | 563 | 1.18e-126 | 383 |
| Msa0141820 | MtrunA17_Chr8g0375341 | 37.276 | 558 | 328 | 6 | 10 | 553 | 36 | 585 | 3.11e-126 | 382 |
| Msa0141820 | MtrunA17_Chr7g0261791 | 36.984 | 557 | 340 | 6 | 10 | 558 | 25 | 578 | 5.07e-126 | 382 |
| Msa0141820 | MtrunA17_Chr3g0142101 | 36.861 | 567 | 329 | 11 | 14 | 567 | 35 | 585 | 2.15e-125 | 380 |
| Msa0141820 | MtrunA17_Chr5g0399071 | 37.589 | 564 | 330 | 7 | 10 | 559 | 21 | 576 | 5.97e-125 | 379 |
| Msa0141820 | MtrunA17_Chr8g0375351 | 36.804 | 557 | 332 | 5 | 10 | 553 | 36 | 585 | 7.69e-124 | 376 |
| Msa0141820 | MtrunA17_Chr8g0375321 | 37.004 | 554 | 331 | 5 | 10 | 551 | 33 | 580 | 1.36e-122 | 373 |
| Msa0141820 | MtrunA17_Chr4g0056431 | 37.986 | 566 | 328 | 8 | 10 | 559 | 21 | 579 | 8.24e-121 | 369 |
| Msa0141820 | MtrunA17_Chr1g0187241 | 35.624 | 553 | 344 | 4 | 6 | 550 | 18 | 566 | 1.01e-120 | 369 |
| Msa0141820 | MtrunA17_Chr3g0142091 | 36.590 | 563 | 332 | 9 | 14 | 564 | 26 | 575 | 1.26e-120 | 368 |
| Msa0141820 | MtrunA17_Chr7g0255621 | 35.602 | 573 | 350 | 7 | 6 | 564 | 12 | 579 | 1.56e-120 | 368 |
| Msa0141820 | MtrunA17_Chr3g0104011 | 35.676 | 555 | 334 | 8 | 10 | 550 | 18 | 563 | 2.08e-119 | 364 |
| Msa0141820 | MtrunA17_Chr7g0261771 | 36.131 | 548 | 340 | 5 | 10 | 550 | 27 | 571 | 3.29e-119 | 365 |
| Msa0141820 | MtrunA17_Chr7g0261851 | 36.918 | 558 | 342 | 5 | 6 | 556 | 20 | 574 | 3.18e-118 | 362 |
| Msa0141820 | MtrunA17_Chr8g0375331 | 36.643 | 554 | 331 | 5 | 10 | 550 | 20 | 566 | 5.19e-118 | 361 |
| Msa0141820 | MtrunA17_Chr8g0375361 | 36.347 | 553 | 328 | 6 | 13 | 550 | 38 | 581 | 1.60e-117 | 360 |
| Msa0141820 | MtrunA17_Chr7g0214731 | 36.252 | 571 | 340 | 11 | 16 | 568 | 63 | 627 | 3.33e-116 | 358 |
| Msa0141820 | MtrunA17_Chr7g0255611 | 35.192 | 574 | 347 | 10 | 9 | 564 | 26 | 592 | 5.78e-116 | 356 |
| Msa0141820 | MtrunA17_Chr4g0063591 | 37.702 | 557 | 314 | 9 | 11 | 550 | 19 | 559 | 1.64e-114 | 352 |
| Msa0141820 | MtrunA17_Chr7g0255601 | 35.519 | 549 | 335 | 7 | 16 | 550 | 29 | 572 | 1.98e-112 | 348 |
| Msa0141820 | MtrunA17_Chr1g0166711 | 35.766 | 548 | 341 | 5 | 10 | 550 | 21 | 564 | 1.83e-111 | 345 |
| Msa0141820 | MtrunA17_Chr1g0166791 | 32.605 | 549 | 358 | 5 | 10 | 550 | 20 | 564 | 8.10e-110 | 340 |
| Msa0141820 | MtrunA17_Chr7g0240381 | 35.357 | 560 | 333 | 9 | 6 | 553 | 19 | 561 | 1.43e-108 | 337 |
| Msa0141820 | MtrunA17_Chr7g0261661 | 40.749 | 454 | 257 | 6 | 104 | 549 | 3 | 452 | 1.45e-108 | 334 |
| Msa0141820 | MtrunA17_Chr3g0114501 | 36.823 | 554 | 327 | 9 | 10 | 550 | 18 | 561 | 1.51e-108 | 337 |
| Msa0141820 | MtrunA17_Chr4g0008651 | 34.234 | 555 | 344 | 8 | 18 | 562 | 38 | 581 | 1.52e-105 | 329 |
| Msa0141820 | MtrunA17_Chr3g0112611 | 34.426 | 549 | 339 | 7 | 18 | 555 | 36 | 574 | 1.13e-102 | 322 |
| Msa0141820 | MtrunA17_Chr8g0353031 | 35.053 | 562 | 313 | 10 | 16 | 553 | 20 | 553 | 3.18e-102 | 320 |
| Msa0141820 | MtrunA17_Chr5g0439381 | 34.103 | 563 | 346 | 7 | 10 | 564 | 24 | 569 | 6.03e-102 | 320 |
| Msa0141820 | MtrunA17_Chr1g0166771 | 34.816 | 517 | 315 | 8 | 27 | 533 | 3 | 507 | 7.85e-102 | 318 |
| Msa0141820 | MtrunA17_Chr5g0415791 | 35.125 | 558 | 340 | 8 | 14 | 554 | 29 | 581 | 4.72e-101 | 318 |
| Msa0141820 | MtrunA17_Chr3g0112671 | 33.757 | 551 | 334 | 8 | 22 | 562 | 41 | 570 | 7.73e-101 | 317 |
| Msa0141820 | MtrunA17_Chr4g0014871 | 33.635 | 553 | 330 | 10 | 10 | 550 | 26 | 553 | 2.15e-100 | 315 |
| Msa0141820 | MtrunA17_Chr1g0166741 | 33.586 | 527 | 331 | 6 | 13 | 531 | 26 | 541 | 4.31e-100 | 315 |
| Msa0141820 | MtrunA17_Chr7g0217461 | 32.230 | 574 | 362 | 7 | 10 | 564 | 20 | 585 | 9.55e-98 | 309 |
| Msa0141820 | MtrunA17_Chr4g0014801 | 34.601 | 552 | 325 | 10 | 10 | 550 | 25 | 551 | 2.91e-97 | 306 |
| Msa0141820 | MtrunA17_Chr1g0166731 | 36.543 | 457 | 279 | 5 | 101 | 550 | 9 | 461 | 4.66e-96 | 301 |
| Msa0141820 | MtrunA17_Chr4g0054891 | 31.634 | 569 | 360 | 8 | 10 | 562 | 106 | 661 | 7.84e-96 | 306 |
| Msa0141820 | MtrunA17_Chr4g0014791 | 34.182 | 550 | 328 | 10 | 10 | 550 | 25 | 549 | 1.60e-95 | 302 |
| Msa0141820 | MtrunA17_Chr4g0014781 | 32.909 | 550 | 337 | 8 | 10 | 550 | 25 | 551 | 5.91e-95 | 301 |
| Msa0141820 | MtrunA17_Chr5g0400371 | 30.071 | 562 | 371 | 7 | 10 | 555 | 108 | 663 | 1.72e-94 | 303 |
| Msa0141820 | MtrunA17_Chr3g0077151 | 33.996 | 553 | 320 | 9 | 10 | 550 | 24 | 543 | 3.45e-94 | 298 |
| Msa0141820 | MtrunA17_Chr1g0213711 | 30.404 | 569 | 365 | 11 | 14 | 566 | 21 | 574 | 1.01e-93 | 298 |
| Msa0141820 | MtrunA17_Chr4g0014841 | 33.091 | 550 | 334 | 10 | 10 | 550 | 25 | 549 | 1.03e-92 | 295 |
| Msa0141820 | MtrunA17_Chr4g0011471 | 32.844 | 545 | 333 | 8 | 24 | 548 | 26 | 557 | 3.53e-91 | 291 |
| Msa0141820 | MtrunA17_Chr7g0218851 | 30.672 | 551 | 354 | 11 | 13 | 548 | 45 | 582 | 4.16e-91 | 292 |
| Msa0141820 | MtrunA17_Chr7g0261751 | 34.958 | 472 | 267 | 4 | 10 | 443 | 27 | 496 | 6.26e-91 | 289 |
| Msa0141820 | MtrunA17_Chr4g0059991 | 30.957 | 575 | 348 | 13 | 12 | 554 | 20 | 577 | 1.30e-90 | 290 |
| Msa0141820 | MtrunA17_Chr4g0059971 | 31.041 | 567 | 351 | 8 | 10 | 550 | 32 | 584 | 6.22e-89 | 286 |
| Msa0141820 | MtrunA17_Chr7g0214461 | 29.982 | 547 | 357 | 10 | 15 | 548 | 79 | 612 | 8.64e-88 | 284 |
| Msa0141820 | MtrunA17_Chr3g0082631 | 35.682 | 440 | 259 | 7 | 140 | 559 | 30 | 465 | 1.11e-87 | 279 |
| Msa0141820 | MtrunA17_Chr4g0011041 | 29.875 | 559 | 361 | 8 | 10 | 548 | 32 | 579 | 1.75e-87 | 282 |
| Msa0141820 | MtrunA17_Chr4g0060071 | 51.210 | 248 | 116 | 1 | 309 | 551 | 52 | 299 | 5.84e-87 | 271 |
| Msa0141820 | MtrunA17_Chr4g0059981 | 30.517 | 580 | 360 | 13 | 11 | 563 | 30 | 593 | 1.34e-85 | 278 |
| Msa0141820 | MtrunA17_Chr1g0147631 | 32.860 | 563 | 343 | 12 | 14 | 556 | 25 | 572 | 6.46e-83 | 270 |
| Msa0141820 | MtrunA17_Chr4g0014861 | 34.824 | 425 | 259 | 7 | 136 | 550 | 12 | 428 | 8.42e-83 | 265 |
| Msa0141820 | MtrunA17_Chr2g0331521 | 30.590 | 559 | 358 | 13 | 14 | 553 | 22 | 569 | 1.03e-81 | 267 |
| Msa0141820 | MtrunA17_Chr2g0331481 | 31.349 | 571 | 357 | 12 | 5 | 554 | 16 | 572 | 2.29e-81 | 267 |
| Msa0141820 | MtrunA17_Chr4g0060001 | 31.588 | 554 | 344 | 11 | 15 | 547 | 30 | 569 | 3.74e-81 | 266 |
| Msa0141820 | MtrunA17_Chr4g0003761 | 30.915 | 579 | 364 | 15 | 9 | 566 | 26 | 589 | 4.42e-81 | 265 |
| Msa0141820 | MtrunA17_Chr8g0390331 | 30.357 | 560 | 359 | 11 | 12 | 554 | 13 | 558 | 5.67e-81 | 265 |
| Msa0141820 | MtrunA17_Chr2g0331511 | 31.944 | 576 | 358 | 15 | 7 | 562 | 16 | 577 | 7.67e-81 | 266 |
| Msa0141820 | MtrunA17_Chr7g0240271 | 28.727 | 550 | 364 | 8 | 14 | 544 | 24 | 564 | 2.49e-80 | 263 |
| Msa0141820 | MtrunA17_Chr8g0362781 | 28.371 | 571 | 380 | 8 | 7 | 555 | 23 | 586 | 8.01e-80 | 262 |
| Msa0141820 | MtrunA17_Chr2g0331471 | 31.634 | 569 | 352 | 15 | 7 | 554 | 83 | 635 | 2.29e-78 | 261 |
| Msa0141820 | MtrunA17_Chr7g0240281 | 29.730 | 555 | 360 | 10 | 14 | 547 | 24 | 569 | 1.13e-76 | 254 |
| Msa0141820 | MtrunA17_Chr8g0362801 | 32.409 | 469 | 295 | 10 | 113 | 565 | 12 | 474 | 9.41e-76 | 248 |
| Msa0141820 | MtrunA17_Chr7g0234151 | 34.735 | 452 | 254 | 10 | 101 | 547 | 3 | 418 | 2.02e-73 | 240 |
| Msa0141820 | MtrunA17_Chr7g0234381 | 34.513 | 452 | 255 | 9 | 101 | 547 | 3 | 418 | 6.00e-73 | 239 |
| Msa0141820 | MtrunA17_Chr1g0177591 | 30.877 | 570 | 346 | 14 | 2 | 554 | 32 | 570 | 6.01e-72 | 241 |
| Msa0141820 | MtrunA17_Chr7g0234181 | 33.259 | 448 | 260 | 7 | 104 | 547 | 1 | 413 | 1.29e-70 | 233 |
| Msa0141820 | MtrunA17_Chr7g0261731 | 36.061 | 330 | 208 | 2 | 10 | 338 | 27 | 354 | 1.31e-70 | 231 |
| Msa0141820 | MtrunA17_Chr7g0235521 | 30.065 | 459 | 293 | 8 | 105 | 544 | 4 | 453 | 9.20e-69 | 229 |
| Msa0141820 | MtrunA17_Chr1g0157611 | 29.189 | 555 | 360 | 13 | 12 | 547 | 14 | 554 | 2.33e-68 | 231 |
| Msa0141820 | MtrunA17_Chr7g0240211 | 30.065 | 459 | 293 | 8 | 105 | 544 | 4 | 453 | 4.38e-68 | 228 |
| Msa0141820 | MtrunA17_Chr7g0240181 | 30.065 | 459 | 293 | 8 | 105 | 544 | 4 | 453 | 5.29e-68 | 228 |
| Msa0141820 | MtrunA17_Chr7g0240131 | 29.847 | 459 | 294 | 8 | 105 | 544 | 4 | 453 | 1.09e-67 | 227 |
| Msa0141820 | MtrunA17_Chr1g0157601 | 28.678 | 537 | 354 | 11 | 18 | 537 | 19 | 543 | 1.69e-67 | 229 |
| Msa0141820 | MtrunA17_Chr2g0331461 | 30.427 | 562 | 358 | 12 | 5 | 546 | 16 | 564 | 1.89e-66 | 228 |
| Msa0141820 | MtrunA17_Chr2g0326211 | 28.214 | 560 | 351 | 15 | 14 | 552 | 20 | 549 | 3.05e-66 | 225 |
| Msa0141820 | MtrunA17_Chr2g0325951 | 27.957 | 558 | 354 | 14 | 17 | 552 | 18 | 549 | 3.87e-66 | 224 |
| Msa0141820 | MtrunA17_Chr2g0325961 | 28.417 | 556 | 355 | 13 | 17 | 552 | 18 | 550 | 1.49e-65 | 223 |
| Msa0141820 | MtrunA17_Chr7g0240151 | 30.044 | 456 | 279 | 8 | 105 | 544 | 4 | 435 | 1.84e-65 | 220 |
| Msa0141820 | MtrunA17_Chr5g0415841 | 29.274 | 468 | 310 | 7 | 104 | 554 | 3 | 466 | 1.05e-64 | 219 |
| Msa0141820 | MtrunA17_Chr1g0157621 | 29.691 | 485 | 311 | 14 | 74 | 541 | 40 | 511 | 4.31e-61 | 211 |
| Msa0141820 | MtrunA17_Chr3g0142121 | 38.869 | 283 | 154 | 7 | 292 | 564 | 11 | 284 | 3.51e-58 | 196 |
| Msa0141820 | MtrunA17_Chr1g0177611 | 31.767 | 447 | 266 | 12 | 131 | 554 | 11 | 441 | 7.94e-58 | 199 |
| Msa0141820 | MtrunA17_Chr3g0142111 | 36.111 | 288 | 174 | 4 | 14 | 298 | 46 | 326 | 5.93e-55 | 189 |
| Msa0141820 | MtrunA17_Chr1g0177631 | 31.544 | 447 | 267 | 12 | 131 | 554 | 11 | 441 | 1.26e-54 | 191 |
| Msa0141820 | MtrunA17_Chr6g0451841 | 26.678 | 566 | 356 | 15 | 15 | 554 | 8 | 540 | 1.58e-54 | 193 |
| Msa0141820 | MtrunA17_Chr3g0112631 | 36.678 | 289 | 165 | 8 | 291 | 567 | 3 | 285 | 4.14e-50 | 174 |
| Msa0141820 | MtrunA17_Chr7g0261721 | 37.441 | 211 | 124 | 3 | 358 | 561 | 5 | 214 | 3.63e-36 | 135 |
| Msa0141820 | MtrunA17_Chr4g0060061 | 44.715 | 123 | 68 | 0 | 128 | 250 | 6 | 128 | 6.07e-33 | 122 |
| Msa0141820 | MtrunA17_Chr7g0261831 | 43.333 | 150 | 80 | 3 | 247 | 392 | 1 | 149 | 6.48e-31 | 119 |
| Msa0141820 | MtrunA17_Chr3g0112651 | 34.731 | 167 | 108 | 1 | 126 | 292 | 38 | 203 | 3.59e-27 | 109 |
| Msa0141820 | MtrunA17_Chr1g0147591 | 30.693 | 202 | 123 | 3 | 143 | 332 | 5 | 201 | 3.13e-24 | 100 |
| Msa0141820 | MtrunA17_Chr2g0326221 | 29.333 | 225 | 133 | 6 | 329 | 552 | 26 | 225 | 5.56e-23 | 97.8 |
| Msa0141820 | MtrunA17_Chr4g0060051 | 40.217 | 92 | 55 | 0 | 9 | 100 | 17 | 108 | 4.56e-17 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0141820 | AT1G27040.1 | 45.304 | 543 | 279 | 7 | 16 | 549 | 27 | 560 | 2.20e-157 | 462 |
| Msa0141820 | AT1G27040.2 | 45.304 | 543 | 279 | 7 | 16 | 549 | 23 | 556 | 3.36e-157 | 461 |
| Msa0141820 | AT1G27040.3 | 45.009 | 531 | 274 | 7 | 28 | 549 | 7 | 528 | 5.25e-154 | 452 |
| Msa0141820 | AT1G69850.1 | 42.807 | 570 | 292 | 5 | 13 | 555 | 22 | 584 | 3.33e-153 | 452 |
| Msa0141820 | AT1G59740.1 | 40.619 | 549 | 304 | 6 | 10 | 546 | 35 | 573 | 9.74e-141 | 420 |
| Msa0141820 | AT1G33440.1 | 40.345 | 580 | 314 | 9 | 3 | 567 | 25 | 587 | 7.79e-137 | 410 |
| Msa0141820 | AT5G62730.1 | 39.318 | 557 | 305 | 6 | 9 | 551 | 49 | 586 | 2.35e-132 | 399 |
| Msa0141820 | AT1G68570.1 | 40.107 | 561 | 315 | 6 | 12 | 556 | 19 | 574 | 3.02e-130 | 394 |
| Msa0141820 | AT5G62730.2 | 39.522 | 544 | 296 | 6 | 22 | 551 | 3 | 527 | 8.03e-130 | 390 |
| Msa0141820 | AT1G68570.2 | 40.367 | 545 | 304 | 6 | 28 | 556 | 5 | 544 | 7.73e-128 | 386 |
| Msa0141820 | AT5G01180.2 | 38.739 | 555 | 316 | 9 | 10 | 550 | 19 | 563 | 1.06e-126 | 384 |
| Msa0141820 | AT5G01180.3 | 38.739 | 555 | 316 | 9 | 10 | 550 | 19 | 563 | 1.06e-126 | 384 |
| Msa0141820 | AT5G01180.1 | 38.739 | 555 | 316 | 9 | 10 | 550 | 19 | 563 | 1.06e-126 | 384 |
| Msa0141820 | AT2G02040.1 | 37.545 | 554 | 326 | 5 | 10 | 550 | 35 | 581 | 1.48e-126 | 384 |
| Msa0141820 | AT3G54140.1 | 36.937 | 555 | 327 | 8 | 10 | 550 | 18 | 563 | 3.17e-123 | 374 |
| Msa0141820 | AT3G54140.2 | 36.937 | 555 | 327 | 8 | 10 | 550 | 18 | 563 | 3.17e-123 | 374 |
| Msa0141820 | AT1G62200.1 | 37.097 | 558 | 323 | 8 | 10 | 552 | 46 | 590 | 5.78e-122 | 372 |
| Msa0141820 | AT3G25280.1 | 38.547 | 537 | 289 | 10 | 16 | 547 | 21 | 521 | 3.28e-121 | 368 |
| Msa0141820 | AT2G26690.1 | 38.324 | 561 | 314 | 8 | 10 | 554 | 18 | 562 | 6.06e-121 | 369 |
| Msa0141820 | AT2G26690.2 | 38.858 | 543 | 300 | 8 | 28 | 554 | 3 | 529 | 8.55e-119 | 362 |
| Msa0141820 | AT3G25260.1 | 39.147 | 539 | 289 | 12 | 10 | 547 | 15 | 515 | 1.40e-118 | 361 |
| Msa0141820 | AT1G12110.1 | 36.444 | 568 | 340 | 7 | 10 | 562 | 21 | 582 | 5.83e-118 | 362 |
| Msa0141820 | AT1G62200.2 | 35.495 | 586 | 323 | 8 | 10 | 552 | 46 | 619 | 9.87e-118 | 362 |
| Msa0141820 | AT2G26690.3 | 39.434 | 530 | 289 | 8 | 41 | 554 | 4 | 517 | 1.64e-117 | 358 |
| Msa0141820 | AT1G62200.3 | 35.495 | 586 | 323 | 8 | 10 | 552 | 60 | 633 | 1.66e-117 | 362 |
| Msa0141820 | AT2G02020.1 | 35.688 | 538 | 306 | 5 | 10 | 542 | 36 | 538 | 2.35e-114 | 351 |
| Msa0141820 | AT5G46050.1 | 37.011 | 562 | 339 | 9 | 13 | 565 | 23 | 578 | 1.58e-111 | 345 |
| Msa0141820 | AT5G46040.1 | 35.649 | 547 | 340 | 7 | 12 | 550 | 22 | 564 | 6.60e-110 | 341 |
| Msa0141820 | AT5G13400.1 | 35.125 | 558 | 341 | 9 | 16 | 556 | 64 | 617 | 1.29e-107 | 336 |
| Msa0141820 | AT3G54450.1 | 34.464 | 560 | 327 | 10 | 14 | 555 | 10 | 547 | 3.26e-105 | 327 |
| Msa0141820 | AT1G69870.1 | 35.060 | 579 | 351 | 9 | 6 | 565 | 41 | 613 | 6.11e-105 | 329 |
| Msa0141820 | AT3G21670.1 | 35.507 | 552 | 329 | 6 | 10 | 550 | 23 | 558 | 1.76e-104 | 327 |
| Msa0141820 | AT2G40460.1 | 35.199 | 554 | 338 | 10 | 10 | 554 | 18 | 559 | 1.64e-103 | 324 |
| Msa0141820 | AT2G37900.1 | 34.342 | 562 | 337 | 9 | 6 | 553 | 26 | 569 | 3.13e-103 | 323 |
| Msa0141820 | AT3G53960.1 | 33.573 | 557 | 340 | 11 | 13 | 553 | 34 | 576 | 5.79e-100 | 315 |
| Msa0141820 | AT1G32450.1 | 31.652 | 575 | 367 | 9 | 10 | 564 | 31 | 599 | 4.17e-97 | 308 |
| Msa0141820 | AT5G46050.2 | 38.085 | 470 | 277 | 8 | 104 | 565 | 3 | 466 | 2.42e-96 | 302 |
| Msa0141820 | AT1G72140.1 | 34.347 | 559 | 317 | 11 | 10 | 551 | 28 | 553 | 3.37e-96 | 304 |
| Msa0141820 | AT4G21680.1 | 31.851 | 562 | 358 | 7 | 10 | 553 | 22 | 576 | 6.49e-95 | 302 |
| Msa0141820 | AT2G37900.2 | 34.940 | 498 | 294 | 8 | 68 | 553 | 11 | 490 | 1.03e-94 | 298 |
| Msa0141820 | AT2G02020.2 | 32.288 | 542 | 298 | 8 | 10 | 542 | 36 | 517 | 4.87e-94 | 298 |
| Msa0141820 | AT1G22570.1 | 33.892 | 537 | 313 | 11 | 11 | 528 | 25 | 538 | 1.58e-92 | 295 |
| Msa0141820 | AT1G22550.1 | 32.270 | 564 | 337 | 9 | 11 | 554 | 25 | 563 | 2.18e-92 | 295 |
| Msa0141820 | AT1G72125.1 | 32.731 | 553 | 340 | 10 | 14 | 553 | 26 | 559 | 8.28e-92 | 293 |
| Msa0141820 | AT1G72120.1 | 33.394 | 548 | 330 | 8 | 18 | 553 | 31 | 555 | 3.20e-91 | 291 |
| Msa0141820 | AT1G22540.1 | 33.454 | 553 | 338 | 10 | 10 | 553 | 24 | 555 | 4.95e-90 | 288 |
| Msa0141820 | AT1G22570.2 | 33.846 | 520 | 302 | 11 | 28 | 528 | 5 | 501 | 5.16e-89 | 285 |
| Msa0141820 | AT5G62680.1 | 31.294 | 572 | 364 | 9 | 5 | 555 | 34 | 597 | 3.03e-88 | 285 |
| Msa0141820 | AT1G72130.1 | 32.721 | 544 | 318 | 10 | 18 | 550 | 27 | 533 | 2.10e-87 | 281 |
| Msa0141820 | AT1G27080.1 | 31.542 | 577 | 361 | 11 | 1 | 562 | 1 | 558 | 5.01e-87 | 281 |
| Msa0141820 | AT5G19640.1 | 30.275 | 545 | 343 | 10 | 18 | 548 | 61 | 582 | 4.06e-84 | 274 |
| Msa0141820 | AT3G47960.1 | 31.206 | 564 | 359 | 9 | 14 | 555 | 57 | 613 | 4.75e-83 | 272 |
| Msa0141820 | AT3G16180.1 | 30.070 | 572 | 371 | 11 | 10 | 561 | 16 | 578 | 3.23e-81 | 266 |
| Msa0141820 | AT1G27080.2 | 33.072 | 511 | 310 | 10 | 67 | 562 | 23 | 516 | 8.47e-81 | 263 |
| Msa0141820 | AT1G18880.1 | 29.772 | 571 | 364 | 11 | 19 | 567 | 22 | 577 | 1.99e-80 | 264 |
| Msa0141820 | AT1G52190.1 | 29.021 | 572 | 375 | 11 | 14 | 563 | 19 | 581 | 1.24e-78 | 259 |
| Msa0141820 | AT3G45660.1 | 29.821 | 560 | 355 | 14 | 15 | 561 | 20 | 554 | 4.20e-77 | 254 |
| Msa0141820 | AT3G45660.3 | 29.821 | 560 | 355 | 14 | 15 | 561 | 20 | 554 | 4.20e-77 | 254 |
| Msa0141820 | AT3G45660.2 | 29.821 | 560 | 355 | 14 | 15 | 561 | 41 | 575 | 5.03e-77 | 254 |
| Msa0141820 | AT3G45650.1 | 29.502 | 522 | 337 | 8 | 42 | 554 | 48 | 547 | 1.95e-76 | 253 |
| Msa0141820 | AT3G45720.1 | 30.280 | 535 | 334 | 12 | 42 | 563 | 45 | 553 | 7.98e-76 | 251 |
| Msa0141820 | AT1G69860.1 | 29.837 | 553 | 365 | 8 | 14 | 556 | 16 | 555 | 9.05e-76 | 251 |
| Msa0141820 | AT3G45710.1 | 29.923 | 518 | 328 | 13 | 59 | 563 | 63 | 558 | 1.80e-74 | 247 |
| Msa0141820 | AT3G45700.1 | 30.784 | 536 | 330 | 15 | 45 | 563 | 35 | 546 | 3.50e-73 | 244 |
| Msa0141820 | AT1G72130.2 | 33.716 | 436 | 255 | 8 | 125 | 549 | 2 | 414 | 1.01e-72 | 239 |
| Msa0141820 | AT1G72130.3 | 33.716 | 436 | 255 | 8 | 125 | 549 | 2 | 414 | 1.01e-72 | 239 |
| Msa0141820 | AT5G28470.2 | 27.965 | 565 | 380 | 9 | 6 | 555 | 7 | 559 | 1.29e-72 | 243 |
| Msa0141820 | AT3G45680.1 | 30.038 | 526 | 332 | 12 | 42 | 555 | 46 | 547 | 2.01e-72 | 242 |
| Msa0141820 | AT3G45650.2 | 28.233 | 549 | 337 | 9 | 42 | 555 | 48 | 574 | 1.56e-71 | 240 |
| Msa0141820 | AT5G28470.1 | 27.788 | 565 | 379 | 10 | 6 | 555 | 7 | 557 | 1.64e-69 | 234 |
| Msa0141820 | AT3G45690.1 | 29.084 | 557 | 327 | 17 | 5 | 554 | 8 | 503 | 7.53e-68 | 229 |
| Msa0141820 | AT5G14940.1 | 27.352 | 574 | 355 | 17 | 14 | 556 | 5 | 547 | 3.70e-60 | 209 |
| Msa0141820 | AT3G01350.1 | 26.279 | 567 | 364 | 12 | 14 | 548 | 5 | 549 | 1.96e-54 | 194 |
| Msa0141820 | AT2G38100.1 | 24.587 | 545 | 339 | 17 | 44 | 564 | 18 | 514 | 6.42e-31 | 127 |
| Msa0141820 | AT2G38100.2 | 24.587 | 545 | 339 | 17 | 44 | 564 | 2 | 498 | 7.21e-31 | 126 |
| Msa0141820 | AT2G38100.3 | 24.587 | 545 | 339 | 17 | 44 | 564 | 24 | 520 | 8.66e-31 | 126 |
| Msa0141820 | AT5G11570.1 | 22.684 | 529 | 329 | 12 | 25 | 547 | 22 | 476 | 1.33e-30 | 125 |
Find 116 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAGACATGTTTACACTTAT+TGG | 0.112396 | 1_4:-550968 | Msa0141820:CDS |
| AATATTGTGCTTAATATTAT+TGG | 0.168870 | 1_4:+551367 | None:intergenic |
| TTTACTTGGTTTGTGCTTCT+TGG | 0.185331 | 1_4:-550724 | Msa0141820:CDS |
| CTTCTGCATTCTCCGGAATT+TGG | 0.196390 | 1_4:+551683 | None:intergenic |
| CTTACCACAGGAGCAATATT+TGG | 0.237027 | 1_4:-552000 | Msa0141820:CDS |
| TTGGTGTTACTTTCATTAAT+TGG | 0.238023 | 1_4:-551981 | Msa0141820:CDS |
| AACAACCCTAACCAACTTAA+TGG | 0.251379 | 1_4:-553041 | Msa0141820:CDS |
| CACTTAGTACAGCAATTTCT+TGG | 0.276660 | 1_4:-550901 | Msa0141820:CDS |
| ACCTGTATGATTCTAATTAG+AGG | 0.292803 | 1_4:+551838 | None:intergenic |
| GAAAGTTGAGCTGCTTCCTT+TGG | 0.308304 | 1_4:+552051 | None:intergenic |
| CACCTTCAAAGAATTGGAAT+TGG | 0.309993 | 1_4:-551142 | Msa0141820:CDS |
| TTGGATCTTTATCATCAAAT+TGG | 0.315670 | 1_4:+552070 | None:intergenic |
| CCTAGTCTTCTTTGTACCCT+TGG | 0.318512 | 1_4:+553290 | None:intergenic |
| ATCTACCATATTATGTTCTA+TGG | 0.326060 | 1_4:+551054 | None:intergenic |
| CAGTTCCCATTAAGTTGGTT+AGG | 0.326657 | 1_4:+553035 | None:intergenic |
| ATCAGACACCTTCAAAGAAT+TGG | 0.327219 | 1_4:-551148 | Msa0141820:CDS |
| TCTTTGAAGGTGTCTGATTC+CGG | 0.339948 | 1_4:+551153 | None:intergenic |
| GCTATATCTTTGCAAGGAAT+TGG | 0.342659 | 1_4:+552219 | None:intergenic |
| TTAAAAGGACTGATCAATTC+AGG | 0.346244 | 1_4:-551612 | Msa0141820:intron |
| CACTTGTTCCTAATGCAAAA+AGG | 0.346610 | 1_4:+552127 | None:intergenic |
| ACAGTTATGAAATCCTTAAA+AGG | 0.349093 | 1_4:-551627 | Msa0141820:CDS |
| TCACATTGGTTCATATGAAT+TGG | 0.352432 | 1_4:+552195 | None:intergenic |
| GCTATATCAATGTTAGTTGC+TGG | 0.355294 | 1_4:-551106 | Msa0141820:CDS |
| CTCAATTCTCTCTATTTGCA+TGG | 0.360522 | 1_4:-551899 | Msa0141820:CDS |
| TGTAGCCATAGAACATAATA+TGG | 0.362955 | 1_4:-551059 | Msa0141820:CDS |
| AAATGATGTTGACATGGTTA+AGG | 0.368323 | 1_4:-550660 | Msa0141820:CDS |
| TGCATTTCTTCTGCATTCTC+CGG | 0.374049 | 1_4:+551676 | None:intergenic |
| AAGGAATTGGTCTTAATTGT+TGG | 0.385710 | 1_4:+552232 | None:intergenic |
| TCTTGGTGTTCTGTTGCATT+TGG | 0.392399 | 1_4:-550884 | Msa0141820:CDS |
| CTCGGTCGTATAGAGGAATT+AGG | 0.398446 | 1_4:+551215 | None:intergenic |
| CATTTATCTATATAAGTTCA+TGG | 0.398857 | 1_4:-553604 | Msa0141820:five_prime_UTR |
| ATGAACAATAGAGGGATTAC+TGG | 0.402130 | 1_4:+551244 | None:intergenic |
| ATCCAATTCCAATTCTTTGA+AGG | 0.403302 | 1_4:+551140 | None:intergenic |
| CTAATTAGAGGACTTCCCTT+TGG | 0.409783 | 1_4:+551850 | None:intergenic |
| CCAGGGAATCTGCAGAAGTA+TGG | 0.410219 | 1_4:-553321 | Msa0141820:intron |
| AGCTTAATAACTTATTTCAC+TGG | 0.415965 | 1_4:-553094 | Msa0141820:CDS |
| TTAATATTATTGGTAGCATT+CGG | 0.424737 | 1_4:+551377 | None:intergenic |
| AACCTTGGACACAAACATCT+TGG | 0.425740 | 1_4:-551293 | Msa0141820:CDS |
| ATCAAATTGGTCAGCTCCTA+AGG | 0.427585 | 1_4:+552083 | None:intergenic |
| TTGTGTTCTGTTTGCATGCA+TGG | 0.432835 | 1_4:-552951 | Msa0141820:CDS |
| AACCAATGTGAACCTGCTAA+TGG | 0.439088 | 1_4:-552183 | Msa0141820:CDS |
| ATTAGGAACAAGTGGTGTTA+AGG | 0.443046 | 1_4:-552118 | Msa0141820:CDS |
| TCAAAGAATTGGAATTGGAT+TGG | 0.444870 | 1_4:-551137 | Msa0141820:CDS |
| TTCTATGCAGAAAGTTCAGC+TGG | 0.449535 | 1_4:-550932 | Msa0141820:CDS |
| AAACAGAAAACTCCAAATTC+CGG | 0.450491 | 1_4:-551695 | Msa0141820:CDS |
| GAAGGTGTCTGATTCCGGTT+GGG | 0.453057 | 1_4:+551158 | None:intergenic |
| ACCTTGGACACAAACATCTT+GGG | 0.453201 | 1_4:-551292 | Msa0141820:CDS |
| ACAACCCTAACCAACTTAAT+GGG | 0.457460 | 1_4:-553040 | Msa0141820:CDS |
| CAAGCTGCTATACTTTATAC+AGG | 0.458105 | 1_4:-552156 | Msa0141820:CDS |
| GTACTAATCAAGGATGGTAT+TGG | 0.459784 | 1_4:-551954 | Msa0141820:CDS |
| GGAAACGTGCTTGAACTGTT+AGG | 0.460595 | 1_4:+552253 | None:intergenic |
| TAGTGTCTTCTTTGATCTGA+AGG | 0.461038 | 1_4:+553542 | None:intergenic |
| AGTTCCCATTAAGTTGGTTA+GGG | 0.462802 | 1_4:+553036 | None:intergenic |
| AAAAGCAGTTCCCATTAAGT+TGG | 0.463975 | 1_4:+553030 | None:intergenic |
| GCAGCTTGGCTTCCATTAGC+AGG | 0.464099 | 1_4:+552171 | None:intergenic |
| TTCTTAGATAGAGCAGCAGT+TGG | 0.471072 | 1_4:-551466 | Msa0141820:CDS |
| AGGACAAACATGAACAATAG+AGG | 0.473937 | 1_4:+551235 | None:intergenic |
| AATTGGATTAGTACTAATCA+AGG | 0.476446 | 1_4:-551964 | Msa0141820:CDS |
| GTTTGCATGCATGGAATTGT+TGG | 0.479572 | 1_4:-552942 | Msa0141820:intron |
| AAGGCAGCTTTACCAGCCTT+AGG | 0.482025 | 1_4:-552099 | Msa0141820:CDS |
| AGTTATTAAGCTCACTGCAT+TGG | 0.489046 | 1_4:+553105 | None:intergenic |
| TGAAGGTGTCTGATTCCGGT+TGG | 0.491653 | 1_4:+551157 | None:intergenic |
| TCCTCTAATTAGAATCATAC+AGG | 0.495772 | 1_4:-551839 | Msa0141820:intron |
| TACAGAAACAATACTCCAAA+GGG | 0.497381 | 1_4:-551865 | Msa0141820:CDS |
| GTTGAACTTTCAGGTGTTTG+TGG | 0.503430 | 1_4:-551728 | Msa0141820:intron |
| CAAATATTGCTCCTGTGGTA+AGG | 0.505900 | 1_4:+552001 | None:intergenic |
| TTTCTGATACATATTTGTCT+AGG | 0.508442 | 1_4:-552982 | Msa0141820:CDS |
| ATTACTGGGAGGGAGGGTCC+TGG | 0.515478 | 1_4:+551259 | None:intergenic |
| TTAGATAGAGCAGCAGTTGG+AGG | 0.517849 | 1_4:-551463 | Msa0141820:CDS |
| CTGTGATTCTTCGAATAAGC+GGG | 0.518290 | 1_4:+551185 | None:intergenic |
| TTATTGGTAGCATTCGGACT+AGG | 0.518823 | 1_4:+551383 | None:intergenic |
| ATCTTGGGATTCAAAATGCC+AGG | 0.520418 | 1_4:-551277 | Msa0141820:CDS |
| GAGGAAACAGTACAGGATCA+TGG | 0.528992 | 1_4:-551444 | Msa0141820:CDS |
| AGAATCACAGGAATCCCAAC+CGG | 0.532778 | 1_4:-551172 | Msa0141820:CDS |
| TCCCAAGATGTTTGTGTCCA+AGG | 0.533877 | 1_4:+551291 | None:intergenic |
| TCAATTCTCTCTATTTGCAT+GGG | 0.538564 | 1_4:-551898 | Msa0141820:CDS |
| TTCCATTAGCAGGTTCACAT+TGG | 0.538946 | 1_4:+552181 | None:intergenic |
| CCAAGGGTACAAAGAAGACT+AGG | 0.545747 | 1_4:-553290 | Msa0141820:CDS |
| CATACAACAAAGCACAACCT+TGG | 0.548442 | 1_4:-551308 | Msa0141820:CDS |
| GCAGTTGGAGGAAACAGTAC+AGG | 0.551246 | 1_4:-551451 | Msa0141820:CDS |
| AGAGGGATTACTGGGAGGGA+GGG | 0.552016 | 1_4:+551253 | None:intergenic |
| GATAAATGTGCCGCAAGTTG+TGG | 0.555661 | 1_4:+553619 | None:intergenic |
| CCGCTTATTCGAAGAATCAC+AGG | 0.558543 | 1_4:-551184 | Msa0141820:CDS |
| AATTGGTCAGCTCCTAAGGC+TGG | 0.558800 | 1_4:+552087 | None:intergenic |
| GCTTAATAACTTATTTCACT+GGG | 0.561279 | 1_4:-553093 | Msa0141820:CDS |
| TAGAGGGATTACTGGGAGGG+AGG | 0.563260 | 1_4:+551252 | None:intergenic |
| CAAAGTGAGTGGTGGTTGGT+TGG | 0.564096 | 1_4:-550825 | Msa0141820:CDS |
| CTTACTTCATCCACAACTTG+CGG | 0.568581 | 1_4:-553629 | Msa0141820:five_prime_UTR |
| CAATAGAGGGATTACTGGGA+GGG | 0.581806 | 1_4:+551249 | None:intergenic |
| CTACAGAAACAATACTCCAA+AGG | 0.582632 | 1_4:-551866 | Msa0141820:CDS |
| TTAACAAAGTGAGTGGTGGT+TGG | 0.583530 | 1_4:-550829 | Msa0141820:CDS |
| TATGGAAGGGTTAGAGAACA+TGG | 0.587825 | 1_4:-553137 | Msa0141820:CDS |
| AACACCAAATATTGCTCCTG+TGG | 0.591161 | 1_4:+551996 | None:intergenic |
| GGACAAACATGAACAATAGA+GGG | 0.591843 | 1_4:+551236 | None:intergenic |
| TACAAGCACAGTGGTTGTTG+AGG | 0.592321 | 1_4:-550855 | Msa0141820:CDS |
| ATTGGTGCTATATCTTTGCA+AGG | 0.603950 | 1_4:+552213 | None:intergenic |
| GGAGGAGAAAACAGAAACAT+AGG | 0.605577 | 1_4:-553721 | None:intergenic |
| ATTTGATGATAAAGATCCAA+AGG | 0.609608 | 1_4:-552067 | Msa0141820:CDS |
| CTGTATAAAGTATAGCAGCT+TGG | 0.610383 | 1_4:+552157 | None:intergenic |
| TGAACAATAGAGGGATTACT+GGG | 0.612071 | 1_4:+551245 | None:intergenic |
| TGATTTAAATGATGTTGACA+TGG | 0.624317 | 1_4:-550666 | Msa0141820:CDS |
| GAAGTATGGCAACACAACCA+AGG | 0.637959 | 1_4:-553307 | Msa0141820:CDS |
| CCTGTGATTCTTCGAATAAG+CGG | 0.644958 | 1_4:+551184 | None:intergenic |
| GGATTAGTACTAATCAAGGA+TGG | 0.648794 | 1_4:-551960 | Msa0141820:CDS |
| AAGTATGGCAACACAACCAA+GGG | 0.650795 | 1_4:-553306 | Msa0141820:CDS |
| ATCAAAGAAGACACTAACAA+TGG | 0.660539 | 1_4:-553535 | Msa0141820:intron |
| GAAATTAATCCACCTAGGAG+TGG | 0.661331 | 1_4:+553001 | None:intergenic |
| CAACATCATTTAAATCACCT+AGG | 0.666986 | 1_4:+550672 | None:intergenic |
| TTGGTATAGATACAAAACAG+TGG | 0.674197 | 1_4:-550705 | Msa0141820:CDS |
| TATCAGAAATTAATCCACCT+AGG | 0.677447 | 1_4:+552996 | None:intergenic |
| AGGGTACAAAGAAGACTAGG+AGG | 0.688134 | 1_4:-553287 | Msa0141820:CDS |
| GAGGTAGTTAACAAAGTGAG+TGG | 0.707459 | 1_4:-550836 | Msa0141820:CDS |
| ACAATAGAGGGATTACTGGG+AGG | 0.708379 | 1_4:+551248 | None:intergenic |
| ACAGTGGAAGACAAACACCT+AGG | 0.710549 | 1_4:-550689 | Msa0141820:CDS |
| GTAGTTAACAAAGTGAGTGG+TGG | 0.723635 | 1_4:-550833 | Msa0141820:CDS |
| TGGTTACTTTACAAGCACAG+TGG | 0.730755 | 1_4:-550864 | Msa0141820:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGACATTATAAAAATAAATT+TGG | + | chr1_4:550693-550712 | None:intergenic | 10.0% |
| !!! | AAACATTTTTAACATATAAA+AGG | + | chr1_4:551169-551188 | None:intergenic | 10.0% |
| !!! | ATTTTTAATGTTCTTCAAAA+TGG | - | chr1_4:550887-550906 | Msa0141820:CDS | 15.0% |
| !! | TCAATTTCTTAACTTATTAT+AGG | - | chr1_4:550929-550948 | Msa0141820:CDS | 15.0% |
| !! | TAACTTATTATAGGTTATAT+TGG | - | chr1_4:550938-550957 | Msa0141820:CDS | 15.0% |
| !!! | TAAATTGAAATTCCAATTTT+TGG | - | chr1_4:551202-551221 | Msa0141820:CDS | 15.0% |
| !! | TGTTTATAATGATTAATCAT+GGG | + | chr1_4:551818-551837 | None:intergenic | 15.0% |
| !! | TTGTTTATAATGATTAATCA+TGG | + | chr1_4:551819-551838 | None:intergenic | 15.0% |
| !!! | AACTAATTTTTTTAATTGCA+GGG | - | chr1_4:552084-552103 | Msa0141820:CDS | 15.0% |
| !! | AAAATGTTATTGTACTTTAA+AGG | - | chr1_4:552589-552608 | Msa0141820:intron | 15.0% |
| !! | AAATGTTATTGTACTTTAAA+GGG | - | chr1_4:552590-552609 | Msa0141820:intron | 15.0% |
| !! | AATATTGTGCTTAATATTAT+TGG | + | chr1_4:553005-553024 | None:intergenic | 15.0% |
| !!! | ATTTGGTTACATTTTTGTAA+GGG | + | chr1_4:550676-550695 | None:intergenic | 20.0% |
| !!! | AATTTGGTTACATTTTTGTA+AGG | + | chr1_4:550677-550696 | None:intergenic | 20.0% |
| !! | CATTTATCTATATAAGTTCA+TGG | - | chr1_4:550765-550784 | Msa0141820:CDS | 20.0% |
| !! | TGAAGATAGAATAAAAATGA+GGG | + | chr1_4:551651-551670 | None:intergenic | 20.0% |
| !!! | GCATATGAGATTTTTTTAAA+AGG | - | chr1_4:552047-552066 | Msa0141820:CDS | 20.0% |
| !!! | CAACTAATTTTTTTAATTGC+AGG | - | chr1_4:552083-552102 | Msa0141820:CDS | 20.0% |
| !!! | AACTTTCAAGCTTTTTTAAT+TGG | - | chr1_4:552334-552353 | Msa0141820:intron | 20.0% |
| !!! | ATTTAATTTGTTGAACTTTC+AGG | - | chr1_4:552632-552651 | Msa0141820:intron | 20.0% |
| !!! | TTAATATTATTGGTAGCATT+CGG | + | chr1_4:552995-553014 | None:intergenic | 20.0% |
| !!! | TGTAAACTTTGTATTTTACT+TGG | - | chr1_4:553631-553650 | Msa0141820:five_prime_UTR | 20.0% |
| ! | TGAAGAACATTAAAAATGTG+TGG | + | chr1_4:550884-550903 | None:intergenic | 25.0% |
| !! | ATTGAATCATTTTCCTTAAC+TGG | + | chr1_4:550914-550933 | None:intergenic | 25.0% |
| !! | TTTTGTATATGGTAAGAACT+TGG | - | chr1_4:551120-551139 | Msa0141820:CDS | 25.0% |
| ! | AGCTTAATAACTTATTTCAC+TGG | - | chr1_4:551275-551294 | Msa0141820:CDS | 25.0% |
| ! | GCTTAATAACTTATTTCACT+GGG | - | chr1_4:551276-551295 | Msa0141820:CDS | 25.0% |
| ! | TTTCTGATACATATTTGTCT+AGG | - | chr1_4:551387-551406 | Msa0141820:CDS | 25.0% |
| !! | TTGATTCTCAAATGTGTTTT+CGG | + | chr1_4:551535-551554 | None:intergenic | 25.0% |
| ! | GTGAAGATAGAATAAAAATG+AGG | + | chr1_4:551652-551671 | None:intergenic | 25.0% |
| ! | TAATTGAAGGTGAATGTTTA+AGG | - | chr1_4:551859-551878 | Msa0141820:CDS | 25.0% |
| ! | TAAAAAAATCTCATATGCGA+CGG | + | chr1_4:552045-552064 | None:intergenic | 25.0% |
| ! | TTGGATCTTTATCATCAAAT+TGG | + | chr1_4:552302-552321 | None:intergenic | 25.0% |
| !! | ATTTGATGATAAAGATCCAA+AGG | - | chr1_4:552302-552321 | Msa0141820:intron | 25.0% |
| !!! | TTGGTGTTACTTTCATTAAT+TGG | - | chr1_4:552388-552407 | Msa0141820:intron | 25.0% |
| !!! | AATTGGATTAGTACTAATCA+AGG | - | chr1_4:552405-552424 | Msa0141820:intron | 25.0% |
| ! | ACAGTTATGAAATCCTTAAA+AGG | - | chr1_4:552742-552761 | Msa0141820:intron | 25.0% |
| ! | ATCTACCATATTATGTTCTA+TGG | + | chr1_4:553318-553337 | None:intergenic | 25.0% |
| !!! | GGTTTTCAATATGCTATTTT+TGG | - | chr1_4:553374-553393 | Msa0141820:intron | 25.0% |
| !!! | ACAAGCTTAACTACTTTTAT+TGG | - | chr1_4:553588-553607 | Msa0141820:five_prime_UTR | 25.0% |
| ! | TGATTTAAATGATGTTGACA+TGG | - | chr1_4:553703-553722 | Msa0141820:five_prime_UTR | 25.0% |
| ATCAAAGAAGACACTAACAA+TGG | - | chr1_4:550834-550853 | Msa0141820:CDS | 30.0% | |
| ACATATAAAAGGACACACAT+GGG | + | chr1_4:551158-551177 | None:intergenic | 30.0% | |
| AACATATAAAAGGACACACA+TGG | + | chr1_4:551159-551178 | None:intergenic | 30.0% | |
| ! | TTTTGTTAAGCTGAAGTTCA+TGG | + | chr1_4:551303-551322 | None:intergenic | 30.0% |
| TATCAGAAATTAATCCACCT+AGG | + | chr1_4:551376-551395 | None:intergenic | 30.0% | |
| CATTCACCTTCAATTATTGA+AGG | + | chr1_4:551855-551874 | None:intergenic | 30.0% | |
| !! | AAGGAATTGGTCTTAATTGT+TGG | + | chr1_4:552140-552159 | None:intergenic | 30.0% |
| !! | TCACATTGGTTCATATGAAT+TGG | + | chr1_4:552177-552196 | None:intergenic | 30.0% |
| TCAATTCTCTCTATTTGCAT+GGG | - | chr1_4:552471-552490 | Msa0141820:intron | 30.0% | |
| TACAGAAACAATACTCCAAA+GGG | - | chr1_4:552504-552523 | Msa0141820:intron | 30.0% | |
| TCCTCTAATTAGAATCATAC+AGG | - | chr1_4:552530-552549 | Msa0141820:intron | 30.0% | |
| ACCTGTATGATTCTAATTAG+AGG | + | chr1_4:552534-552553 | None:intergenic | 30.0% | |
| GAAGCATGTAGAAAAAAATG+AGG | + | chr1_4:552569-552588 | None:intergenic | 30.0% | |
| AAACAGAAAACTCCAAATTC+CGG | - | chr1_4:552674-552693 | Msa0141820:intron | 30.0% | |
| ! | TGAATTGATCAGTCCTTTTA+AGG | + | chr1_4:552758-552777 | None:intergenic | 30.0% |
| TTAAAAGGACTGATCAATTC+AGG | - | chr1_4:552757-552776 | Msa0141820:intron | 30.0% | |
| ATCCAATTCCAATTCTTTGA+AGG | + | chr1_4:553232-553251 | None:intergenic | 30.0% | |
| TCAAAGAATTGGAATTGGAT+TGG | - | chr1_4:553232-553251 | Msa0141820:intron | 30.0% | |
| TGTAGCCATAGAACATAATA+TGG | - | chr1_4:553310-553329 | Msa0141820:CDS | 30.0% | |
| CAAAAAACACTCATTGGTAA+AGG | + | chr1_4:553350-553369 | None:intergenic | 30.0% | |
| !!! | CTTTACCAATGAGTGTTTTT+TGG | - | chr1_4:553348-553367 | Msa0141820:intron | 30.0% |
| TTGGTATAGATACAAAACAG+TGG | - | chr1_4:553664-553683 | Msa0141820:five_prime_UTR | 30.0% | |
| CAACATCATTTAAATCACCT+AGG | + | chr1_4:553700-553719 | None:intergenic | 30.0% | |
| AAATGATGTTGACATGGTTA+AGG | - | chr1_4:553709-553728 | Msa0141820:five_prime_UTR | 30.0% | |
| TAGTGTCTTCTTTGATCTGA+AGG | + | chr1_4:550830-550849 | None:intergenic | 35.0% | |
| TCTTCAAAATGGACCAGTTA+AGG | - | chr1_4:550898-550917 | Msa0141820:CDS | 35.0% | |
| !! | ATAGGTTATATTGGTGTCAC+TGG | - | chr1_4:550947-550966 | Msa0141820:CDS | 35.0% |
| ! | AGTGTTCTAAGCAGACAATT+CGG | + | chr1_4:551006-551025 | None:intergenic | 35.0% |
| ! | AACTTGTTTGATTACTTGCC+AGG | - | chr1_4:551030-551049 | Msa0141820:CDS | 35.0% |
| ACTTGTTTGATTACTTGCCA+GGG | - | chr1_4:551031-551050 | Msa0141820:CDS | 35.0% | |
| !! | AGAGCTGCACTTTTTGTATA+TGG | - | chr1_4:551109-551128 | Msa0141820:CDS | 35.0% |
| TATGGTAAGAACTTGGAACT+TGG | - | chr1_4:551127-551146 | Msa0141820:CDS | 35.0% | |
| AGTTATTAAGCTCACTGCAT+TGG | + | chr1_4:551267-551286 | None:intergenic | 35.0% | |
| AACAACCCTAACCAACTTAA+TGG | - | chr1_4:551328-551347 | Msa0141820:CDS | 35.0% | |
| ACAACCCTAACCAACTTAAT+GGG | - | chr1_4:551329-551348 | Msa0141820:CDS | 35.0% | |
| !! | AGTTCCCATTAAGTTGGTTA+GGG | + | chr1_4:551336-551355 | None:intergenic | 35.0% |
| AAAAGCAGTTCCCATTAAGT+TGG | + | chr1_4:551342-551361 | None:intergenic | 35.0% | |
| CTATCTTCACTTGCATTTCA+CGG | - | chr1_4:551662-551681 | Msa0141820:CDS | 35.0% | |
| TGAGAGCCTTCAATAATTGA+AGG | - | chr1_4:551846-551865 | Msa0141820:CDS | 35.0% | |
| CGGTTGTAAAATAATCGCTA+TGG | + | chr1_4:552025-552044 | None:intergenic | 35.0% | |
| GCTATATCTTTGCAAGGAAT+TGG | + | chr1_4:552153-552172 | None:intergenic | 35.0% | |
| !! | ATTGGTGCTATATCTTTGCA+AGG | + | chr1_4:552159-552178 | None:intergenic | 35.0% |
| CTGTATAAAGTATAGCAGCT+TGG | + | chr1_4:552215-552234 | None:intergenic | 35.0% | |
| CAAGCTGCTATACTTTATAC+AGG | - | chr1_4:552213-552232 | Msa0141820:CDS | 35.0% | |
| ! | GGTCTATACCTTTTTGCATT+AGG | - | chr1_4:552234-552253 | Msa0141820:CDS | 35.0% |
| CACTTGTTCCTAATGCAAAA+AGG | + | chr1_4:552245-552264 | None:intergenic | 35.0% | |
| ! | CTTTTTGCATTAGGAACAAG+TGG | - | chr1_4:552243-552262 | Msa0141820:CDS | 35.0% |
| ! | ATTAGGAACAAGTGGTGTTA+AGG | - | chr1_4:552251-552270 | Msa0141820:CDS | 35.0% |
| !!! | TTTTTACTTAGCCTTACCAC+AGG | - | chr1_4:552357-552376 | Msa0141820:intron | 35.0% |
| ! | GGATTAGTACTAATCAAGGA+TGG | - | chr1_4:552409-552428 | Msa0141820:intron | 35.0% |
| GTACTAATCAAGGATGGTAT+TGG | - | chr1_4:552415-552434 | Msa0141820:intron | 35.0% | |
| CTCAATTCTCTCTATTTGCA+TGG | - | chr1_4:552470-552489 | Msa0141820:intron | 35.0% | |
| CTACAGAAACAATACTCCAA+AGG | - | chr1_4:552503-552522 | Msa0141820:intron | 35.0% | |
| !!! | TTGGAGTTTTCTGTTTCTGA+AGG | + | chr1_4:552670-552689 | None:intergenic | 35.0% |
| GAGATCCATGAAAAAGAAAG+AGG | - | chr1_4:552717-552736 | Msa0141820:intron | 35.0% | |
| !! | TGTCTCCTCTTTCTTTTTCA+TGG | + | chr1_4:552725-552744 | None:intergenic | 35.0% |
| TGAACAATAGAGGGATTACT+GGG | + | chr1_4:553127-553146 | None:intergenic | 35.0% | |
| ATGAACAATAGAGGGATTAC+TGG | + | chr1_4:553128-553147 | None:intergenic | 35.0% | |
| GGACAAACATGAACAATAGA+GGG | + | chr1_4:553136-553155 | None:intergenic | 35.0% | |
| AGGACAAACATGAACAATAG+AGG | + | chr1_4:553137-553156 | None:intergenic | 35.0% | |
| ATCAGACACCTTCAAAGAAT+TGG | - | chr1_4:553221-553240 | Msa0141820:intron | 35.0% | |
| CACCTTCAAAGAATTGGAAT+TGG | - | chr1_4:553227-553246 | Msa0141820:intron | 35.0% | |
| GCTATATCAATGTTAGTTGC+TGG | - | chr1_4:553263-553282 | Msa0141820:CDS | 35.0% | |
| !!! | ACCAATGAGTGTTTTTTGGT+TGG | - | chr1_4:553352-553371 | Msa0141820:intron | 35.0% |
| !!! | CCAATGAGTGTTTTTTGGTT+GGG | - | chr1_4:553353-553372 | Msa0141820:intron | 35.0% |
| GCAGACATGTTTACACTTAT+TGG | - | chr1_4:553401-553420 | Msa0141820:intron | 35.0% | |
| CACTTAGTACAGCAATTTCT+TGG | - | chr1_4:553468-553487 | Msa0141820:intron | 35.0% | |
| !! | TTTACTTGGTTTGTGCTTCT+TGG | - | chr1_4:553645-553664 | Msa0141820:five_prime_UTR | 35.0% |
| CTTACTTCATCCACAACTTG+CGG | - | chr1_4:550740-550759 | Msa0141820:CDS | 40.0% | |
| TTCTAAGCAGACAATTCGGT+TGG | + | chr1_4:551002-551021 | None:intergenic | 40.0% | |
| AAGTATGGCAACACAACCAA+GGG | - | chr1_4:551063-551082 | Msa0141820:CDS | 40.0% | |
| CCATAGCTGCATCCAAAAAT+TGG | + | chr1_4:551217-551236 | None:intergenic | 40.0% | |
| !! | CCAATTTTTGGATGCAGCTA+TGG | - | chr1_4:551214-551233 | Msa0141820:CDS | 40.0% |
| ! | TTTTTGGATGCAGCTATGGA+AGG | - | chr1_4:551218-551237 | Msa0141820:CDS | 40.0% |
| ! | TTTTGGATGCAGCTATGGAA+GGG | - | chr1_4:551219-551238 | Msa0141820:CDS | 40.0% |
| TATGGAAGGGTTAGAGAACA+TGG | - | chr1_4:551232-551251 | Msa0141820:CDS | 40.0% | |
| !! | CAGTTCCCATTAAGTTGGTT+AGG | + | chr1_4:551337-551356 | None:intergenic | 40.0% |
| !!! | GCTTTTTTACTACCACTCCT+AGG | - | chr1_4:551356-551375 | Msa0141820:CDS | 40.0% |
| ! | TTTTTACTACCACTCCTAGG+TGG | - | chr1_4:551359-551378 | Msa0141820:CDS | 40.0% |
| GAAATTAATCCACCTAGGAG+TGG | + | chr1_4:551371-551390 | None:intergenic | 40.0% | |
| TTGTGTTCTGTTTGCATGCA+TGG | - | chr1_4:551418-551437 | Msa0141820:CDS | 40.0% | |
| GTTTGCATGCATGGAATTGT+TGG | - | chr1_4:551427-551446 | Msa0141820:CDS | 40.0% | |
| CTCCTACATTACCAACCATA+GGG | + | chr1_4:551708-551727 | None:intergenic | 40.0% | |
| AACCAATGTGAACCTGCTAA+TGG | - | chr1_4:552186-552205 | Msa0141820:CDS | 40.0% | |
| TTCCATTAGCAGGTTCACAT+TGG | + | chr1_4:552191-552210 | None:intergenic | 40.0% | |
| ATCAAATTGGTCAGCTCCTA+AGG | + | chr1_4:552289-552308 | None:intergenic | 40.0% | |
| CAAATATTGCTCCTGTGGTA+AGG | + | chr1_4:552371-552390 | None:intergenic | 40.0% | |
| CTTACCACAGGAGCAATATT+TGG | - | chr1_4:552369-552388 | Msa0141820:intron | 40.0% | |
| AACACCAAATATTGCTCCTG+TGG | + | chr1_4:552376-552395 | None:intergenic | 40.0% | |
| CTAATTAGAGGACTTCCCTT+TGG | + | chr1_4:552522-552541 | None:intergenic | 40.0% | |
| ! | GTTGAACTTTCAGGTGTTTG+TGG | - | chr1_4:552641-552660 | Msa0141820:intron | 40.0% |
| TGCATTTCTTCTGCATTCTC+CGG | + | chr1_4:552696-552715 | None:intergenic | 40.0% | |
| TTCTTAGATAGAGCAGCAGT+TGG | - | chr1_4:552903-552922 | Msa0141820:intron | 40.0% | |
| ! | TTATTGGTAGCATTCGGACT+AGG | + | chr1_4:552989-553008 | None:intergenic | 40.0% |
| CATACAACAAAGCACAACCT+TGG | - | chr1_4:553061-553080 | Msa0141820:CDS | 40.0% | |
| AACCTTGGACACAAACATCT+TGG | - | chr1_4:553076-553095 | Msa0141820:CDS | 40.0% | |
| ACCTTGGACACAAACATCTT+GGG | - | chr1_4:553077-553096 | Msa0141820:CDS | 40.0% | |
| ATCTTGGGATTCAAAATGCC+AGG | - | chr1_4:553092-553111 | Msa0141820:CDS | 40.0% | |
| ACAAAAACTCGGTCGTATAG+AGG | + | chr1_4:553164-553183 | None:intergenic | 40.0% | |
| GAATAAGCGGGACAAAAACT+CGG | + | chr1_4:553175-553194 | None:intergenic | 40.0% | |
| CTGTGATTCTTCGAATAAGC+GGG | + | chr1_4:553187-553206 | None:intergenic | 40.0% | |
| CCTGTGATTCTTCGAATAAG+CGG | + | chr1_4:553188-553207 | None:intergenic | 40.0% | |
| !! | TCTTTGAAGGTGTCTGATTC+CGG | + | chr1_4:553219-553238 | None:intergenic | 40.0% |
| CCCAACCAAAAAACACTCAT+TGG | + | chr1_4:553356-553375 | None:intergenic | 40.0% | |
| TTCTATGCAGAAAGTTCAGC+TGG | - | chr1_4:553437-553456 | Msa0141820:intron | 40.0% | |
| !! | TCTTGGTGTTCTGTTGCATT+TGG | - | chr1_4:553485-553504 | Msa0141820:intron | 40.0% |
| ! | TGGTTACTTTACAAGCACAG+TGG | - | chr1_4:553505-553524 | Msa0141820:intron | 40.0% |
| GAGGTAGTTAACAAAGTGAG+TGG | - | chr1_4:553533-553552 | Msa0141820:intron | 40.0% | |
| GTAGTTAACAAAGTGAGTGG+TGG | - | chr1_4:553536-553555 | Msa0141820:exon | 40.0% | |
| TTAACAAAGTGAGTGGTGGT+TGG | - | chr1_4:553540-553559 | Msa0141820:five_prime_UTR | 40.0% | |
| GATAAATGTGCCGCAAGTTG+TGG | + | chr1_4:550753-550772 | None:intergenic | 45.0% | |
| GAAGTATGGCAACACAACCA+AGG | - | chr1_4:551062-551081 | Msa0141820:CDS | 45.0% | |
| ! | CCTAGTCTTCTTTGTACCCT+TGG | + | chr1_4:551082-551101 | None:intergenic | 45.0% |
| ! | CCAAGGGTACAAAGAAGACT+AGG | - | chr1_4:551079-551098 | Msa0141820:CDS | 45.0% |
| AGGGTACAAAGAAGACTAGG+AGG | - | chr1_4:551082-551101 | Msa0141820:CDS | 45.0% | |
| TTGCATTTCACGGTACAGCA+AGG | - | chr1_4:551672-551691 | Msa0141820:CDS | 45.0% | |
| GCTCCTACATTACCAACCAT+AGG | + | chr1_4:551709-551728 | None:intergenic | 45.0% | |
| !! | TGGTTGGTAATGTAGGAGCT+AGG | - | chr1_4:551710-551729 | Msa0141820:CDS | 45.0% |
| !! | GGTTGGTAATGTAGGAGCTA+GGG | - | chr1_4:551711-551730 | Msa0141820:CDS | 45.0% |
| GTACTTTCAGCATCATGACG+TGG | - | chr1_4:551787-551806 | Msa0141820:intron | 45.0% | |
| GGAAACGTGCTTGAACTGTT+AGG | + | chr1_4:552119-552138 | None:intergenic | 45.0% | |
| GAAAGTTGAGCTGCTTCCTT+TGG | + | chr1_4:552321-552340 | None:intergenic | 45.0% | |
| CTTCTGCATTCTCCGGAATT+TGG | + | chr1_4:552689-552708 | None:intergenic | 45.0% | |
| TTAGATAGAGCAGCAGTTGG+AGG | - | chr1_4:552906-552925 | Msa0141820:intron | 45.0% | |
| GAGGAAACAGTACAGGATCA+TGG | - | chr1_4:552925-552944 | Msa0141820:intron | 45.0% | |
| TCCCAAGATGTTTGTGTCCA+AGG | + | chr1_4:553081-553100 | None:intergenic | 45.0% | |
| CAATAGAGGGATTACTGGGA+GGG | + | chr1_4:553123-553142 | None:intergenic | 45.0% | |
| ACAATAGAGGGATTACTGGG+AGG | + | chr1_4:553124-553143 | None:intergenic | 45.0% | |
| CTCGGTCGTATAGAGGAATT+AGG | + | chr1_4:553157-553176 | None:intergenic | 45.0% | |
| CCGCTTATTCGAAGAATCAC+AGG | - | chr1_4:553185-553204 | Msa0141820:intron | 45.0% | |
| AGAATCACAGGAATCCCAAC+CGG | - | chr1_4:553197-553216 | Msa0141820:intron | 45.0% | |
| TACAAGCACAGTGGTTGTTG+AGG | - | chr1_4:553514-553533 | Msa0141820:intron | 45.0% | |
| ACAGTGGAAGACAAACACCT+AGG | - | chr1_4:553680-553699 | Msa0141820:five_prime_UTR | 45.0% | |
| CCATACTTCTGCAGATTCCC+TGG | + | chr1_4:551051-551070 | None:intergenic | 50.0% | |
| CCAGGGAATCTGCAGAAGTA+TGG | - | chr1_4:551048-551067 | Msa0141820:CDS | 50.0% | |
| ACGGTACAGCAAGGTGAAGA+GGG | - | chr1_4:551681-551700 | Msa0141820:CDS | 50.0% | |
| !! | GGCCCTATGGTTGGTAATGT+AGG | - | chr1_4:551703-551722 | Msa0141820:CDS | 50.0% |
| AAGGCAGCTTTACCAGCCTT+AGG | - | chr1_4:552270-552289 | Msa0141820:intron | 50.0% | |
| AATTGGTCAGCTCCTAAGGC+TGG | + | chr1_4:552285-552304 | None:intergenic | 50.0% | |
| GCAGTTGGAGGAAACAGTAC+AGG | - | chr1_4:552918-552937 | Msa0141820:intron | 50.0% | |
| !! | GAAGGTGTCTGATTCCGGTT+GGG | + | chr1_4:553214-553233 | None:intergenic | 50.0% |
| !! | TGAAGGTGTCTGATTCCGGT+TGG | + | chr1_4:553215-553234 | None:intergenic | 50.0% |
| CAAAGTGAGTGGTGGTTGGT+TGG | - | chr1_4:553544-553563 | Msa0141820:five_prime_UTR | 50.0% | |
| CACGGTACAGCAAGGTGAAG+AGG | - | chr1_4:551680-551699 | Msa0141820:CDS | 55.0% | |
| CGGTACAGCAAGGTGAAGAG+GGG | - | chr1_4:551682-551701 | Msa0141820:CDS | 55.0% | |
| GCAGCTTGGCTTCCATTAGC+AGG | + | chr1_4:552201-552220 | None:intergenic | 55.0% | |
| AGAGGGATTACTGGGAGGGA+GGG | + | chr1_4:553119-553138 | None:intergenic | 55.0% | |
| TAGAGGGATTACTGGGAGGG+AGG | + | chr1_4:553120-553139 | None:intergenic | 55.0% | |
| CAAGGTGAAGAGGGGCCCTA+TGG | - | chr1_4:551690-551709 | Msa0141820:CDS | 60.0% | |
| GTGAAGAGGGGCCCTATGGT+TGG | - | chr1_4:551694-551713 | Msa0141820:CDS | 60.0% | |
| ATTACTGGGAGGGAGGGTCC+TGG | + | chr1_4:553113-553132 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 550655 | 553736 | 550655 | ID=Msa0141820;Name=Msa0141820 |
| chr1_4 | mRNA | 550655 | 553736 | 550655 | ID=Msa0141820-mRNA-1;Parent=Msa0141820;Name=Msa0141820-mRNA-1;_AED=0.07;_eAED=0.07;_QI=198|1|0.83|1|0.8|0.83|6|0|568 |
| chr1_4 | exon | 550655 | 551489 | 550655 | ID=Msa0141820-mRNA-1:exon:79;Parent=Msa0141820-mRNA-1 |
| chr1_4 | exon | 551613 | 551737 | 551613 | ID=Msa0141820-mRNA-1:exon:78;Parent=Msa0141820-mRNA-1 |
| chr1_4 | exon | 551840 | 552286 | 551840 | ID=Msa0141820-mRNA-1:exon:77;Parent=Msa0141820-mRNA-1 |
| chr1_4 | exon | 552943 | 553160 | 552943 | ID=Msa0141820-mRNA-1:exon:76;Parent=Msa0141820-mRNA-1 |
| chr1_4 | exon | 553261 | 553339 | 553261 | ID=Msa0141820-mRNA-1:exon:75;Parent=Msa0141820-mRNA-1 |
| chr1_4 | exon | 553536 | 553736 | 553536 | ID=Msa0141820-mRNA-1:exon:74;Parent=Msa0141820-mRNA-1 |
| chr1_4 | five_prime_UTR | 553539 | 553736 | 553539 | ID=Msa0141820-mRNA-1:five_prime_utr;Parent=Msa0141820-mRNA-1 |
| chr1_4 | CDS | 553536 | 553538 | 553536 | ID=Msa0141820-mRNA-1:cds;Parent=Msa0141820-mRNA-1 |
| chr1_4 | CDS | 553261 | 553339 | 553261 | ID=Msa0141820-mRNA-1:cds;Parent=Msa0141820-mRNA-1 |
| chr1_4 | CDS | 552943 | 553160 | 552943 | ID=Msa0141820-mRNA-1:cds;Parent=Msa0141820-mRNA-1 |
| chr1_4 | CDS | 551840 | 552286 | 551840 | ID=Msa0141820-mRNA-1:cds;Parent=Msa0141820-mRNA-1 |
| chr1_4 | CDS | 551613 | 551737 | 551613 | ID=Msa0141820-mRNA-1:cds;Parent=Msa0141820-mRNA-1 |
| chr1_4 | CDS | 550655 | 551489 | 550655 | ID=Msa0141820-mRNA-1:cds;Parent=Msa0141820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
