Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0620240 | XP_024628067.1 | 98.974 | 390 | 4 | 0 | 1 | 390 | 1 | 390 | 0.0 | 807 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0620240 | sp|P0DI11|SP13B_ARATH | 48.084 | 287 | 123 | 9 | 1 | 268 | 1 | 280 | 5.51e-70 | 227 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0620240 | A0A072TVW9 | 98.974 | 390 | 4 | 0 | 1 | 390 | 1 | 390 | 0.0 | 807 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0620240 | TF | SBP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa0620240 | 0.831252 | 1.855237e-55 | -8.615850e-47 |
| Msa0002930 | Msa0620240 | 0.824424 | 8.132633e-54 | -8.615850e-47 |
| Msa0003700 | Msa0620240 | 0.820355 | 7.166013e-53 | -8.615850e-47 |
| Msa0004920 | Msa0620240 | 0.820525 | 6.550484e-53 | -8.615850e-47 |
| Msa0016670 | Msa0620240 | 0.828623 | 8.110050e-55 | -8.615850e-47 |
| Msa0017510 | Msa0620240 | 0.854694 | 1.037898e-61 | -8.615850e-47 |
| Msa0028640 | Msa0620240 | 0.816153 | 6.403613e-52 | -8.615850e-47 |
| Msa0032840 | Msa0620240 | -0.819524 | 1.109943e-52 | -8.615850e-47 |
| Msa0034270 | Msa0620240 | 0.833055 | 6.642152e-56 | -8.615850e-47 |
| Msa0036430 | Msa0620240 | 0.827281 | 1.706136e-54 | -8.615850e-47 |
| Msa0036850 | Msa0620240 | 0.801604 | 8.325231e-49 | -8.615850e-47 |
| Msa0040450 | Msa0620240 | 0.827387 | 1.609391e-54 | -8.615850e-47 |
| Msa0044020 | Msa0620240 | 0.822340 | 2.495735e-53 | -8.615850e-47 |
| Msa0046100 | Msa0620240 | 0.812283 | 4.583441e-51 | -8.615850e-47 |
| Msa0046750 | Msa0620240 | 0.801608 | 8.309477e-49 | -8.615850e-47 |
| Msa0051770 | Msa0620240 | 0.810509 | 1.112496e-50 | -8.615850e-47 |
| Msa0053110 | Msa0620240 | 0.818302 | 2.104673e-52 | -8.615850e-47 |
| Msa0072370 | Msa0620240 | 0.815436 | 9.254254e-52 | -8.615850e-47 |
| Msa0072810 | Msa0620240 | 0.804274 | 2.337459e-49 | -8.615850e-47 |
| Msa0078650 | Msa0620240 | 0.806879 | 6.637202e-50 | -8.615850e-47 |
| Msa0081360 | Msa0620240 | 0.806750 | 7.069687e-50 | -8.615850e-47 |
| Msa0081480 | Msa0620240 | 0.800885 | 1.168030e-48 | -8.615850e-47 |
| Msa0084500 | Msa0620240 | 0.808359 | 3.220083e-50 | -8.615850e-47 |
| Msa0090590 | Msa0620240 | 0.801300 | 9.610083e-49 | -8.615850e-47 |
| Msa0094120 | Msa0620240 | 0.819280 | 1.262117e-52 | -8.615850e-47 |
| Msa0098440 | Msa0620240 | 0.828314 | 9.630663e-55 | -8.615850e-47 |
| Msa0103000 | Msa0620240 | 0.828377 | 9.299370e-55 | -8.615850e-47 |
| Msa0105420 | Msa0620240 | 0.817246 | 3.643215e-52 | -8.615850e-47 |
| Msa0106790 | Msa0620240 | 0.806235 | 9.078918e-50 | -8.615850e-47 |
| Msa0110970 | Msa0620240 | 0.868490 | 6.279762e-66 | -8.615850e-47 |
| Msa0114540 | Msa0620240 | -0.822291 | 2.561815e-53 | -8.615850e-47 |
| Msa0118400 | Msa0620240 | 0.817542 | 3.124821e-52 | -8.615850e-47 |
| Msa0118570 | Msa0620240 | 0.805109 | 1.564522e-49 | -8.615850e-47 |
| Msa0616220 | Msa0620240 | 0.825196 | 5.346729e-54 | -8.615850e-47 |
| Msa0618040 | Msa0620240 | 0.815040 | 1.133179e-51 | -8.615850e-47 |
| Msa0620240 | Msa0620990 | 0.804174 | 2.451427e-49 | -8.615850e-47 |
| Msa0620240 | Msa0631120 | 0.830123 | 3.506521e-55 | -8.615850e-47 |
| Msa0620240 | Msa0647130 | 0.802648 | 5.078218e-49 | -8.615850e-47 |
| Msa0620240 | Msa0649980 | 0.802154 | 6.418456e-49 | -8.615850e-47 |
| Msa0620240 | Msa0650020 | 0.804986 | 1.659642e-49 | -8.615850e-47 |
| Msa0620240 | Msa0650090 | 0.802701 | 4.951525e-49 | -8.615850e-47 |
| Msa0620240 | Msa0657970 | 0.816024 | 6.843310e-52 | -8.615850e-47 |
| Msa0620240 | Msa0669340 | 0.809058 | 2.282038e-50 | -8.615850e-47 |
| Msa0620240 | Msa0677290 | 0.804638 | 1.961976e-49 | -8.615850e-47 |
| Msa0620240 | Msa0682330 | 0.821856 | 3.232730e-53 | -8.615850e-47 |
| Msa0620240 | Msa0683510 | 0.812651 | 3.808704e-51 | -8.615850e-47 |
| Msa0620240 | Msa0683570 | 0.809864 | 1.532392e-50 | -8.615850e-47 |
| Msa0620240 | Msa0684500 | 0.827844 | 1.250091e-54 | -8.615850e-47 |
| Msa0620240 | Msa0685330 | 0.800463 | 1.424425e-48 | -8.615850e-47 |
| Msa0620240 | Msa0692080 | 0.821460 | 3.990814e-53 | -8.615850e-47 |
| Msa0620240 | Msa0699550 | 0.827651 | 1.390541e-54 | -8.615850e-47 |
| Msa0620240 | Msa0701280 | 0.804045 | 2.608416e-49 | -8.615850e-47 |
| Msa0620240 | Msa0703230 | 0.805482 | 1.307058e-49 | -8.615850e-47 |
| Msa0620240 | Msa0704600 | 0.803535 | 3.327637e-49 | -8.615850e-47 |
| Msa0620240 | Msa0705870 | 0.806868 | 6.674173e-50 | -8.615850e-47 |
| Msa0620240 | Msa0707220 | 0.806819 | 6.834380e-50 | -8.615850e-47 |
| Msa0620240 | Msa0708520 | 0.824890 | 6.314838e-54 | -8.615850e-47 |
| Msa0620240 | Msa0716760 | 0.801467 | 8.881371e-49 | -8.615850e-47 |
| Msa0620240 | Msa0727710 | 0.803186 | 3.930704e-49 | -8.615850e-47 |
| Msa0620240 | Msa0741900 | 0.816030 | 6.824096e-52 | -8.615850e-47 |
| Msa0620240 | Msa0747780 | 0.811123 | 8.193579e-51 | -8.615850e-47 |
| Msa0620240 | Msa0749760 | 0.819901 | 9.102397e-53 | -8.615850e-47 |
| Msa0620240 | Msa0754720 | -0.811097 | 8.301466e-51 | -8.615850e-47 |
| Msa0620240 | Msa0756630 | -0.830798 | 2.397433e-55 | -8.615850e-47 |
| Msa0620240 | Msa0760380 | 0.835085 | 2.060377e-56 | -8.615850e-47 |
| Msa0620240 | Msa0780250 | 0.819843 | 9.385093e-53 | -8.615850e-47 |
| Msa0620240 | Msa0804680 | 0.811718 | 6.085330e-51 | -8.615850e-47 |
| Msa0620240 | Msa0821760 | 0.801659 | 8.112411e-49 | -8.615850e-47 |
| Msa0620240 | Msa0822990 | 0.827725 | 1.334680e-54 | -8.615850e-47 |
| Msa0620240 | Msa0824660 | 0.841149 | 5.661697e-58 | -8.615850e-47 |
| Msa0620240 | Msa0829620 | 0.803041 | 4.213110e-49 | -8.615850e-47 |
| Msa0620240 | Msa0843220 | 0.803866 | 2.841661e-49 | -8.615850e-47 |
| Msa0620240 | Msa0844240 | 0.812267 | 4.620953e-51 | -8.615850e-47 |
| Msa0620240 | Msa0850960 | 0.821741 | 3.436790e-53 | -8.615850e-47 |
| Msa0620240 | Msa0862100 | 0.826929 | 2.071448e-54 | -8.615850e-47 |
| Msa0620240 | Msa0863930 | 0.814088 | 1.840862e-51 | -8.615850e-47 |
| Msa0620240 | Msa0867890 | 0.811955 | 5.403143e-51 | -8.615850e-47 |
| Msa0620240 | Msa0872310 | 0.834287 | 3.271078e-56 | -8.615850e-47 |
| Msa0620240 | Msa0876200 | 0.808448 | 3.082082e-50 | -8.615850e-47 |
| Msa0620240 | Msa0878290 | 0.801695 | 7.974673e-49 | -8.615850e-47 |
| Msa0620240 | Msa0880140 | 0.854843 | 9.395867e-62 | -8.615850e-47 |
| Msa0620240 | Msa0880440 | 0.978606 | 3.536486e-146 | -8.615850e-47 |
| Msa0620240 | Msa0885060 | 0.828626 | 8.098168e-55 | -8.615850e-47 |
| Msa0620240 | Msa0895790 | 0.802149 | 6.433107e-49 | -8.615850e-47 |
| Msa0620240 | Msa0896750 | 0.804850 | 1.772527e-49 | -8.615850e-47 |
| Msa0620240 | Msa0896970 | 0.811129 | 8.170852e-51 | -8.615850e-47 |
| Msa0620240 | Msa0905550 | 0.809897 | 1.507871e-50 | -8.615850e-47 |
| Msa0620240 | Msa0908050 | 0.818834 | 1.594128e-52 | -8.615850e-47 |
| Msa0620240 | Msa0911990 | 0.818914 | 1.528329e-52 | -8.615850e-47 |
| Msa0620240 | Msa0930780 | 0.846513 | 2.071572e-59 | -8.615850e-47 |
| Msa0620240 | Msa0931720 | 0.809363 | 1.963857e-50 | -8.615850e-47 |
| Msa0620240 | Msa0936270 | 0.804149 | 2.481769e-49 | -8.615850e-47 |
| Msa0620240 | Msa0936410 | 0.815834 | 7.543453e-52 | -8.615850e-47 |
| Msa0620240 | Msa0940460 | 0.800517 | 1.389060e-48 | -8.615850e-47 |
| Msa0620240 | Msa0961690 | 0.810351 | 1.203839e-50 | -8.615850e-47 |
| Msa0620240 | Msa0973250 | 0.810966 | 8.859740e-51 | -8.615850e-47 |
| Msa0620240 | Msa1003750 | 0.821259 | 4.439632e-53 | -8.615850e-47 |
| Msa0620240 | Msa1009000 | 0.803566 | 3.278615e-49 | -8.615850e-47 |
| Msa0620240 | Msa1012810 | 0.826681 | 2.374401e-54 | -8.615850e-47 |
| Msa0620240 | Msa1013400 | 0.800177 | 1.628693e-48 | -8.615850e-47 |
| Msa0620240 | Msa1013770 | 0.817573 | 3.075182e-52 | -8.615850e-47 |
| Msa0620240 | Msa1019020 | 0.809269 | 2.056777e-50 | -8.615850e-47 |
| Msa0620240 | Msa1033560 | 0.802636 | 5.106242e-49 | -8.615850e-47 |
| Msa0620240 | Msa1037920 | 0.818732 | 1.681288e-52 | -8.615850e-47 |
| Msa0620240 | Msa1040830 | 0.805181 | 1.510727e-49 | -8.615850e-47 |
| Msa0620240 | Msa1041530 | 0.813118 | 3.008635e-51 | -8.615850e-47 |
| Msa0620240 | Msa1046470 | 0.801963 | 7.025311e-49 | -8.615850e-47 |
| Msa0620240 | Msa1054240 | 0.825563 | 4.379725e-54 | -8.615850e-47 |
| Msa0620240 | Msa1055260 | 0.811947 | 5.424907e-51 | -8.615850e-47 |
| Msa0620240 | Msa1055280 | 0.813686 | 2.256901e-51 | -8.615850e-47 |
| Msa0620240 | Msa1063950 | 0.822137 | 2.781822e-53 | -8.615850e-47 |
| Msa0620240 | Msa1066490 | 0.822066 | 2.889813e-53 | -8.615850e-47 |
| Msa0620240 | Msa1082700 | 0.816560 | 5.192657e-52 | -8.615850e-47 |
| Msa0620240 | Msa1085200 | 0.818577 | 1.823115e-52 | -8.615850e-47 |
| Msa0620240 | Msa1085300 | 0.802411 | 5.682632e-49 | -8.615850e-47 |
| Msa0620240 | Msa1094420 | 0.810488 | 1.124260e-50 | -8.615850e-47 |
| Msa0620240 | Msa1097560 | 0.820691 | 6.000338e-53 | -8.615850e-47 |
| Msa0620240 | Msa1097640 | 0.849267 | 3.608748e-60 | -8.615850e-47 |
| Msa0620240 | Msa1098560 | 0.804993 | 1.654444e-49 | -8.615850e-47 |
| Msa0620240 | Msa1104000 | 0.809973 | 1.452197e-50 | -8.615850e-47 |
| Msa0620240 | Msa1108160 | 0.804150 | 2.480383e-49 | -8.615850e-47 |
| Msa0620240 | Msa1111110 | 0.820607 | 6.274412e-53 | -8.615850e-47 |
| Msa0620240 | Msa1127140 | 0.810293 | 1.238754e-50 | -8.615850e-47 |
| Msa0620240 | Msa1127890 | 0.820632 | 6.190469e-53 | -8.615850e-47 |
| Msa0620240 | Msa1127950 | 0.823992 | 1.027332e-53 | -8.615850e-47 |
| Msa0620240 | Msa1128710 | 0.830554 | 2.751522e-55 | -8.615850e-47 |
| Msa0620240 | Msa1129980 | 0.800544 | 1.371061e-48 | -8.615850e-47 |
| Msa0620240 | Msa1133000 | 0.998745 | 4.585392e-275 | -8.615850e-47 |
| Msa0620240 | Msa1133710 | 0.802878 | 4.551333e-49 | -8.615850e-47 |
| Msa0620240 | Msa1134110 | 0.812086 | 5.060242e-51 | -8.615850e-47 |
| Msa0620240 | Msa1139810 | 0.837372 | 5.403800e-57 | -8.615850e-47 |
| Msa0620240 | Msa1147570 | 0.813997 | 1.928189e-51 | -8.615850e-47 |
| Msa0620240 | Msa1147900 | 0.808669 | 2.764265e-50 | -8.615850e-47 |
| Msa0620240 | Msa1151910 | 0.824408 | 8.203522e-54 | -8.615850e-47 |
| Msa0620240 | Msa1166400 | 0.804011 | 2.650595e-49 | -8.615850e-47 |
| Msa0620240 | Msa1172450 | 0.805626 | 1.219027e-49 | -8.615850e-47 |
| Msa0620240 | Msa1172670 | 0.813709 | 2.230907e-51 | -8.615850e-47 |
| Msa0620240 | Msa1179280 | 0.805787 | 1.127587e-49 | -8.615850e-47 |
| Msa0620240 | Msa1179940 | 0.803601 | 3.224235e-49 | -8.615850e-47 |
| Msa0620240 | Msa1203250 | 0.801058 | 1.077069e-48 | -8.615850e-47 |
| Msa0620240 | Msa1209460 | 0.821317 | 4.304623e-53 | -8.615850e-47 |
| Msa0620240 | Msa1214890 | 0.801122 | 1.044987e-48 | -8.615850e-47 |
| Msa0620240 | Msa1218600 | 0.803045 | 4.203230e-49 | -8.615850e-47 |
| Msa0620240 | Msa1221560 | 0.808814 | 2.573936e-50 | -8.615850e-47 |
| Msa0620240 | Msa1222970 | 0.817831 | 2.688671e-52 | -8.615850e-47 |
| Msa0620240 | Msa1222990 | 0.800375 | 1.484162e-48 | -8.615850e-47 |
| Msa0620240 | Msa1236100 | 0.814598 | 1.420207e-51 | -8.615850e-47 |
| Msa0620240 | Msa1238930 | 0.812725 | 3.669856e-51 | -8.615850e-47 |
| Msa0620240 | Msa1240310 | 0.810375 | 1.189023e-50 | -8.615850e-47 |
| Msa0620240 | Msa1242240 | 0.803482 | 3.413769e-49 | -8.615850e-47 |
| Msa0620240 | Msa1261010 | 0.808878 | 2.494327e-50 | -8.615850e-47 |
| Msa0620240 | Msa1264020 | 0.833940 | 3.996191e-56 | -8.615850e-47 |
| Msa0620240 | Msa1269580 | -0.819851 | 9.347870e-53 | -8.615850e-47 |
| Msa0620240 | Msa1271300 | 0.819267 | 1.270459e-52 | -8.615850e-47 |
| Msa0620240 | Msa1280420 | 0.823994 | 1.026051e-53 | -8.615850e-47 |
| Msa0620240 | Msa1283860 | 0.803320 | 3.687585e-49 | -8.615850e-47 |
| Msa0620240 | Msa1284260 | 0.801444 | 8.976715e-49 | -8.615850e-47 |
| Msa0620240 | Msa1292830 | 0.805644 | 1.208412e-49 | -8.615850e-47 |
| Msa0620240 | Msa1300490 | 0.804283 | 2.326632e-49 | -8.615850e-47 |
| Msa0620240 | Msa1303250 | 0.816566 | 5.176206e-52 | -8.615850e-47 |
| Msa0620240 | Msa1308380 | 0.838063 | 3.592837e-57 | -8.615850e-47 |
| Msa0620240 | Msa1313150 | 0.804136 | 2.497082e-49 | -8.615850e-47 |
| Msa0620240 | Msa1319650 | 0.815040 | 1.132994e-51 | -8.615850e-47 |
| Msa0620240 | Msa1320740 | 0.833397 | 5.461202e-56 | -8.615850e-47 |
| Msa0620240 | Msa1351760 | 0.824621 | 7.309316e-54 | -8.615850e-47 |
| Msa0620240 | Msa1364470 | -0.823453 | 1.374092e-53 | -8.615850e-47 |
| Msa0620240 | Msa1366600 | 0.803392 | 3.562615e-49 | -8.615850e-47 |
| Msa0620240 | Msa1367080 | 0.807847 | 4.139046e-50 | -8.615850e-47 |
| Msa0620240 | Msa1371430 | 0.804398 | 2.201609e-49 | -8.615850e-47 |
| Msa0620240 | Msa1373330 | 0.815303 | 9.907066e-52 | -8.615850e-47 |
| Msa0620240 | Msa1374040 | 0.837823 | 4.140848e-57 | -8.615850e-47 |
| Msa0620240 | Msa1374550 | 0.824512 | 7.754042e-54 | -8.615850e-47 |
| Msa0620240 | Msa1382540 | 0.806730 | 7.136481e-50 | -8.615850e-47 |
| Msa0620240 | Msa1388820 | 0.802716 | 4.915763e-49 | -8.615850e-47 |
| Msa0620240 | Msa1390310 | 0.802371 | 5.789941e-49 | -8.615850e-47 |
| Msa0620240 | Msa1409870 | 0.806325 | 8.691029e-50 | -8.615850e-47 |
| Msa0620240 | Msa1415640 | 0.816145 | 6.430453e-52 | -8.615850e-47 |
| Msa0620240 | Msa1417870 | 0.803126 | 4.045109e-49 | -8.615850e-47 |
| Msa0620240 | Msa1420060 | 0.815741 | 7.912474e-52 | -8.615850e-47 |
| Msa0620240 | Msa1423880 | 0.801669 | 8.073816e-49 | -8.615850e-47 |
| Msa0620240 | Msa1427760 | 0.814294 | 1.657389e-51 | -8.615850e-47 |
| Msa0620240 | Msa1429360 | -0.816423 | 5.573821e-52 | -8.615850e-47 |
| Msa0620240 | Msa1430280 | 0.809331 | 1.994505e-50 | -8.615850e-47 |
| Msa0620240 | Msa1445080 | 0.802123 | 6.513175e-49 | -8.615850e-47 |
| Msa0620240 | Msa1452120 | 0.811063 | 8.443617e-51 | -8.615850e-47 |
| Msa0620240 | Msa1459180 | 0.801384 | 9.234941e-49 | -8.615850e-47 |
| Msa0620240 | Msa1459380 | 0.815518 | 8.873566e-52 | -8.615850e-47 |
| Msa0620240 | Msa1460020 | 0.801012 | 1.100613e-48 | -8.615850e-47 |
| Msa0124340 | Msa0620240 | 0.842557 | 2.403802e-58 | -8.615850e-47 |
| Msa0130570 | Msa0620240 | 0.826614 | 2.462910e-54 | -8.615850e-47 |
| Msa0140570 | Msa0620240 | 0.804024 | 2.634555e-49 | -8.615850e-47 |
| Msa0140780 | Msa0620240 | 0.816809 | 4.565388e-52 | -8.615850e-47 |
| Msa0141600 | Msa0620240 | 0.805461 | 1.320436e-49 | -8.615850e-47 |
| Msa0146260 | Msa0620240 | 0.832651 | 8.368797e-56 | -8.615850e-47 |
| Msa0147560 | Msa0620240 | 0.818363 | 2.038488e-52 | -8.615850e-47 |
| Msa0153420 | Msa0620240 | 0.823333 | 1.465408e-53 | -8.615850e-47 |
| Msa0157290 | Msa0620240 | 0.854441 | 1.228635e-61 | -8.615850e-47 |
| Msa0171290 | Msa0620240 | 0.810817 | 9.545204e-51 | -8.615850e-47 |
| Msa0172350 | Msa0620240 | 0.806431 | 8.254171e-50 | -8.615850e-47 |
| Msa0173660 | Msa0620240 | 0.805577 | 1.248080e-49 | -8.615850e-47 |
| Msa0173990 | Msa0620240 | 0.809661 | 1.694539e-50 | -8.615850e-47 |
| Msa0186890 | Msa0620240 | 0.801532 | 8.614409e-49 | -8.615850e-47 |
| Msa0191250 | Msa0620240 | 0.802252 | 6.125966e-49 | -8.615850e-47 |
| Msa0197890 | Msa0620240 | 0.803781 | 2.959092e-49 | -8.615850e-47 |
| Msa0197930 | Msa0620240 | 0.813170 | 2.931333e-51 | -8.615850e-47 |
| Msa0200260 | Msa0620240 | 0.812433 | 4.249482e-51 | -8.615850e-47 |
| Msa0202950 | Msa0620240 | 0.817452 | 3.272934e-52 | -8.615850e-47 |
| Msa0203030 | Msa0620240 | 0.828977 | 6.659799e-55 | -8.615850e-47 |
| Msa0204980 | Msa0620240 | 0.800236 | 1.584310e-48 | -8.615850e-47 |
| Msa0219190 | Msa0620240 | 0.807787 | 4.262174e-50 | -8.615850e-47 |
| Msa0225740 | Msa0620240 | 0.823016 | 1.737561e-53 | -8.615850e-47 |
| Msa0227400 | Msa0620240 | 0.800756 | 1.241493e-48 | -8.615850e-47 |
| Msa0230550 | Msa0620240 | -0.815852 | 7.474373e-52 | -8.615850e-47 |
| Msa0369850 | Msa0620240 | 0.809320 | 2.005785e-50 | -8.615850e-47 |
| Msa0395870 | Msa0620240 | 0.826680 | 2.375021e-54 | -8.615850e-47 |
| Msa0402330 | Msa0620240 | 0.808100 | 3.655347e-50 | -8.615850e-47 |
| Msa0410500 | Msa0620240 | 0.841503 | 4.569339e-58 | -8.615850e-47 |
| Msa0410650 | Msa0620240 | 0.829224 | 5.800343e-55 | -8.615850e-47 |
| Msa0414170 | Msa0620240 | 0.805518 | 1.284089e-49 | -8.615850e-47 |
| Msa0414950 | Msa0620240 | -0.810586 | 1.070714e-50 | -8.615850e-47 |
| Msa0417880 | Msa0620240 | 0.834418 | 3.032137e-56 | -8.615850e-47 |
| Msa0419820 | Msa0620240 | 0.836967 | 6.861367e-57 | -8.615850e-47 |
| Msa0422850 | Msa0620240 | 0.800890 | 1.165538e-48 | -8.615850e-47 |
| Msa0423900 | Msa0620240 | 0.810592 | 1.067819e-50 | -8.615850e-47 |
| Msa0432770 | Msa0620240 | 0.804556 | 2.040744e-49 | -8.615850e-47 |
| Msa0433640 | Msa0620240 | 0.814973 | 1.172970e-51 | -8.615850e-47 |
| Msa0436280 | Msa0620240 | -0.817075 | 3.980543e-52 | -8.615850e-47 |
| Msa0436460 | Msa0620240 | 0.801969 | 7.005787e-49 | -8.615850e-47 |
| Msa0436500 | Msa0620240 | 0.824630 | 7.274819e-54 | -8.615850e-47 |
| Msa0461720 | Msa0620240 | 0.831189 | 1.922485e-55 | -8.615850e-47 |
| Msa0461730 | Msa0620240 | 0.803114 | 4.067714e-49 | -8.615850e-47 |
| Msa0475790 | Msa0620240 | 0.818189 | 2.231839e-52 | -8.615850e-47 |
| Msa0480000 | Msa0620240 | 0.805872 | 1.082273e-49 | -8.615850e-47 |
| Msa0480980 | Msa0620240 | 0.809129 | 2.204293e-50 | -8.615850e-47 |
| Msa0481110 | Msa0620240 | 0.806989 | 6.291759e-50 | -8.615850e-47 |
| Msa0238890 | Msa0620240 | 0.818501 | 1.897122e-52 | -8.615850e-47 |
| Msa0239570 | Msa0620240 | 0.805491 | 1.301247e-49 | -8.615850e-47 |
| Msa0243100 | Msa0620240 | 0.833868 | 4.165564e-56 | -8.615850e-47 |
| Msa0244860 | Msa0620240 | 0.805554 | 1.262455e-49 | -8.615850e-47 |
| Msa0261340 | Msa0620240 | 0.811188 | 7.931278e-51 | -8.615850e-47 |
| Msa0264150 | Msa0620240 | 0.802525 | 5.384047e-49 | -8.615850e-47 |
| Msa0264570 | Msa0620240 | 0.808922 | 2.440761e-50 | -8.615850e-47 |
| Msa0264870 | Msa0620240 | 0.808689 | 2.737514e-50 | -8.615850e-47 |
| Msa0267760 | Msa0620240 | 0.807107 | 5.939153e-50 | -8.615850e-47 |
| Msa0280900 | Msa0620240 | 0.805337 | 1.401561e-49 | -8.615850e-47 |
| Msa0283450 | Msa0620240 | 0.807862 | 4.108660e-50 | -8.615850e-47 |
| Msa0283520 | Msa0620240 | 0.827891 | 1.217786e-54 | -8.615850e-47 |
| Msa0284420 | Msa0620240 | 0.814090 | 1.839009e-51 | -8.615850e-47 |
| Msa0287650 | Msa0620240 | 0.826462 | 2.677751e-54 | -8.615850e-47 |
| Msa0289890 | Msa0620240 | 0.805508 | 1.290466e-49 | -8.615850e-47 |
| Msa0292400 | Msa0620240 | 0.807246 | 5.550672e-50 | -8.615850e-47 |
| Msa0299890 | Msa0620240 | 0.831035 | 2.096668e-55 | -8.615850e-47 |
| Msa0306300 | Msa0620240 | 0.829074 | 6.307378e-55 | -8.615850e-47 |
| Msa0308830 | Msa0620240 | 0.812937 | 3.296345e-51 | -8.615850e-47 |
| Msa0311860 | Msa0620240 | 0.825027 | 5.863202e-54 | -8.615850e-47 |
| Msa0316810 | Msa0620240 | 0.804830 | 1.789152e-49 | -8.615850e-47 |
| Msa0316850 | Msa0620240 | 0.801337 | 9.444916e-49 | -8.615850e-47 |
| Msa0317250 | Msa0620240 | 0.818005 | 2.456184e-52 | -8.615850e-47 |
| Msa0317280 | Msa0620240 | 0.804655 | 1.946568e-49 | -8.615850e-47 |
| Msa0320100 | Msa0620240 | 0.816022 | 6.849898e-52 | -8.615850e-47 |
| Msa0321860 | Msa0620240 | 0.819674 | 1.026032e-52 | -8.615850e-47 |
| Msa0332000 | Msa0620240 | 0.817962 | 2.511516e-52 | -8.615850e-47 |
| Msa0334040 | Msa0620240 | 0.813926 | 1.999041e-51 | -8.615850e-47 |
| Msa0337330 | Msa0620240 | 0.818232 | 2.182055e-52 | -8.615850e-47 |
| Msa0337850 | Msa0620240 | 0.819526 | 1.108811e-52 | -8.615850e-47 |
| Msa0355270 | Msa0620240 | 0.807603 | 4.663964e-50 | -8.615850e-47 |
| Msa0362780 | Msa0620240 | 0.825321 | 4.995954e-54 | -8.615850e-47 |
| Msa0363350 | Msa0620240 | 0.811758 | 5.964410e-51 | -8.615850e-47 |
| Msa0483860 | Msa0620240 | 0.814297 | 1.655073e-51 | -8.615850e-47 |
| Msa0484780 | Msa0620240 | 0.804565 | 2.032457e-49 | -8.615850e-47 |
| Msa0485990 | Msa0620240 | 0.815383 | 9.510879e-52 | -8.615850e-47 |
| Msa0500360 | Msa0620240 | 0.813970 | 1.955017e-51 | -8.615850e-47 |
| Msa0503580 | Msa0620240 | 0.844130 | 9.145554e-59 | -8.615850e-47 |
| Msa0507680 | Msa0620240 | 0.828637 | 8.046903e-55 | -8.615850e-47 |
| Msa0509610 | Msa0620240 | 0.805071 | 1.593094e-49 | -8.615850e-47 |
| Msa0516320 | Msa0620240 | 0.805731 | 1.158668e-49 | -8.615850e-47 |
| Msa0517330 | Msa0620240 | 0.804617 | 1.982320e-49 | -8.615850e-47 |
| Msa0521500 | Msa0620240 | 0.812128 | 4.955317e-51 | -8.615850e-47 |
| Msa0521540 | Msa0620240 | 0.819020 | 1.445720e-52 | -8.615850e-47 |
| Msa0521880 | Msa0620240 | 0.802159 | 6.403935e-49 | -8.615850e-47 |
| Msa0526710 | Msa0620240 | 0.806653 | 7.411525e-50 | -8.615850e-47 |
| Msa0533070 | Msa0620240 | 0.800352 | 1.500510e-48 | -8.615850e-47 |
| Msa0534590 | Msa0620240 | 0.807658 | 4.538726e-50 | -8.615850e-47 |
| Msa0541860 | Msa0620240 | 0.800483 | 1.411156e-48 | -8.615850e-47 |
| Msa0546680 | Msa0620240 | 0.801121 | 1.045615e-48 | -8.615850e-47 |
| Msa0547140 | Msa0620240 | 0.807320 | 5.353821e-50 | -8.615850e-47 |
| Msa0547720 | Msa0620240 | 0.806924 | 6.495715e-50 | -8.615850e-47 |
| Msa0548660 | Msa0620240 | 0.808489 | 3.020275e-50 | -8.615850e-47 |
| Msa0571140 | Msa0620240 | 0.921770 | 2.335325e-88 | -8.615850e-47 |
| Msa0574890 | Msa0620240 | 0.853345 | 2.540297e-61 | -8.615850e-47 |
| Msa0581760 | Msa0620240 | 0.813750 | 2.185674e-51 | -8.615850e-47 |
| Msa0590800 | Msa0620240 | 0.814820 | 1.267743e-51 | -8.615850e-47 |
| Msa0601850 | Msa0620240 | 0.812707 | 3.703244e-51 | -8.615850e-47 |
| Msa0602250 | Msa0620240 | 0.800979 | 1.117607e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0620240 | MtrunA17_Chr8g0386271 | 98.974 | 390 | 4 | 0 | 1 | 390 | 1 | 390 | 0.0 | 807 |
| Msa0620240 | MtrunA17_Chr3g0132091 | 59.631 | 379 | 99 | 20 | 33 | 390 | 6 | 351 | 2.43e-126 | 368 |
| Msa0620240 | MtrunA17_Chr7g0224821 | 44.068 | 236 | 107 | 8 | 1 | 234 | 1 | 213 | 8.15e-50 | 171 |
| Msa0620240 | MtrunA17_Chr2g0308321 | 59.231 | 130 | 48 | 2 | 45 | 174 | 122 | 246 | 1.37e-38 | 145 |
| Msa0620240 | MtrunA17_Chr8g0366211 | 87.912 | 91 | 11 | 0 | 49 | 139 | 39 | 129 | 2.11e-38 | 134 |
| Msa0620240 | MtrunA17_Chr4g0061651 | 54.887 | 133 | 48 | 4 | 45 | 174 | 75 | 198 | 3.29e-37 | 140 |
| Msa0620240 | MtrunA17_Chr5g0420051 | 47.712 | 153 | 75 | 3 | 45 | 196 | 131 | 279 | 2.31e-35 | 134 |
| Msa0620240 | MtrunA17_Chr1g0162871 | 67.901 | 81 | 26 | 0 | 99 | 179 | 104 | 184 | 6.94e-33 | 130 |
| Msa0620240 | MtrunA17_Chr2g0302791 | 52.252 | 111 | 52 | 1 | 66 | 176 | 107 | 216 | 1.17e-32 | 130 |
| Msa0620240 | MtrunA17_Chr3g0122411 | 56.311 | 103 | 42 | 2 | 98 | 197 | 164 | 266 | 1.23e-32 | 127 |
| Msa0620240 | MtrunA17_Chr7g0231911 | 56.842 | 95 | 41 | 0 | 89 | 183 | 139 | 233 | 1.63e-32 | 124 |
| Msa0620240 | MtrunA17_Chr7g0270541 | 48.837 | 129 | 63 | 2 | 58 | 183 | 101 | 229 | 2.53e-32 | 129 |
| Msa0620240 | MtrunA17_Chr1g0194121 | 58.163 | 98 | 41 | 0 | 85 | 182 | 133 | 230 | 3.16e-32 | 129 |
| Msa0620240 | MtrunA17_Chr8g0334671 | 54.867 | 113 | 47 | 1 | 66 | 174 | 150 | 262 | 5.14e-32 | 123 |
| Msa0620240 | MtrunA17_Chr7g0258471 | 34.138 | 290 | 136 | 9 | 94 | 372 | 137 | 382 | 1.95e-31 | 123 |
| Msa0620240 | MtrunA17_Chr8g0360361 | 62.353 | 85 | 32 | 0 | 99 | 183 | 65 | 149 | 3.23e-30 | 114 |
| Msa0620240 | MtrunA17_Chr4g0046991 | 67.568 | 74 | 24 | 0 | 99 | 172 | 73 | 146 | 2.08e-29 | 111 |
| Msa0620240 | MtrunA17_Chr2g0282521 | 61.905 | 84 | 32 | 0 | 93 | 176 | 58 | 141 | 6.04e-28 | 107 |
| Msa0620240 | MtrunA17_Chr8g0377421 | 45.614 | 114 | 59 | 1 | 99 | 209 | 132 | 245 | 3.60e-24 | 101 |
| Msa0620240 | MtrunA17_Chr2g0286661 | 52.703 | 74 | 35 | 0 | 99 | 172 | 103 | 176 | 8.43e-22 | 97.4 |
| Msa0620240 | MtrunA17_Chr8g0377401 | 57.534 | 73 | 31 | 0 | 99 | 171 | 162 | 234 | 2.84e-21 | 92.0 |
| Msa0620240 | MtrunA17_Chr2g0317041 | 61.702 | 47 | 18 | 0 | 99 | 145 | 99 | 145 | 9.62e-15 | 71.2 |
| Msa0620240 | MtrunA17_Chr8g0377431 | 44.286 | 70 | 39 | 0 | 85 | 154 | 137 | 206 | 8.11e-13 | 67.0 |
| Msa0620240 | MtrunA17_Chr1g0175031 | 57.447 | 47 | 20 | 0 | 99 | 145 | 74 | 120 | 9.01e-13 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0620240 | AT5G50570.1 | 48.084 | 287 | 123 | 9 | 1 | 268 | 1 | 280 | 5.60e-71 | 227 |
| Msa0620240 | AT5G50570.2 | 48.084 | 287 | 123 | 9 | 1 | 268 | 1 | 280 | 5.60e-71 | 227 |
| Msa0620240 | AT5G50670.1 | 48.084 | 287 | 123 | 9 | 1 | 268 | 1 | 280 | 5.60e-71 | 227 |
| Msa0620240 | AT5G50670.2 | 48.084 | 287 | 123 | 9 | 1 | 268 | 1 | 280 | 5.60e-71 | 227 |
| Msa0620240 | AT1G76580.2 | 65.591 | 93 | 32 | 0 | 99 | 191 | 114 | 206 | 5.58e-36 | 139 |
| Msa0620240 | AT1G76580.3 | 65.591 | 93 | 32 | 0 | 99 | 191 | 114 | 206 | 6.51e-36 | 139 |
| Msa0620240 | AT1G76580.1 | 65.591 | 93 | 32 | 0 | 99 | 191 | 114 | 206 | 1.19e-35 | 139 |
| Msa0620240 | AT3G60030.1 | 58.716 | 109 | 41 | 1 | 94 | 198 | 122 | 230 | 5.73e-35 | 137 |
| Msa0620240 | AT2G47070.1 | 72.152 | 79 | 22 | 0 | 99 | 177 | 106 | 184 | 1.05e-34 | 136 |
| Msa0620240 | AT1G20980.1 | 43.333 | 180 | 80 | 6 | 2 | 179 | 42 | 201 | 1.39e-33 | 133 |
| Msa0620240 | AT1G69170.1 | 64.444 | 90 | 32 | 0 | 84 | 173 | 109 | 198 | 3.40e-33 | 128 |
| Msa0620240 | AT1G27370.6 | 58.889 | 90 | 37 | 0 | 85 | 174 | 162 | 251 | 7.43e-33 | 126 |
| Msa0620240 | AT1G27370.1 | 58.889 | 90 | 37 | 0 | 85 | 174 | 162 | 251 | 1.17e-32 | 127 |
| Msa0620240 | AT1G27370.5 | 58.889 | 90 | 37 | 0 | 85 | 174 | 162 | 251 | 1.17e-32 | 127 |
| Msa0620240 | AT1G27370.3 | 58.889 | 90 | 37 | 0 | 85 | 174 | 162 | 251 | 1.17e-32 | 127 |
| Msa0620240 | AT1G27370.2 | 58.889 | 90 | 37 | 0 | 85 | 174 | 162 | 251 | 1.17e-32 | 127 |
| Msa0620240 | AT1G27370.4 | 58.889 | 90 | 37 | 0 | 85 | 174 | 162 | 251 | 1.17e-32 | 127 |
| Msa0620240 | AT1G27370.7 | 58.889 | 90 | 37 | 0 | 85 | 174 | 162 | 251 | 1.17e-32 | 127 |
| Msa0620240 | AT1G53160.3 | 60.227 | 88 | 35 | 0 | 89 | 176 | 44 | 131 | 6.62e-31 | 116 |
| Msa0620240 | AT1G53160.2 | 60.227 | 88 | 35 | 0 | 89 | 176 | 44 | 131 | 8.24e-31 | 116 |
| Msa0620240 | AT1G53160.1 | 60.227 | 88 | 35 | 0 | 89 | 176 | 44 | 131 | 8.24e-31 | 116 |
| Msa0620240 | AT2G42200.1 | 61.905 | 84 | 32 | 0 | 96 | 179 | 71 | 154 | 1.32e-30 | 120 |
| Msa0620240 | AT3G57920.1 | 52.885 | 104 | 49 | 0 | 72 | 175 | 32 | 135 | 1.48e-30 | 120 |
| Msa0620240 | AT1G27360.2 | 64.557 | 79 | 28 | 0 | 96 | 174 | 172 | 250 | 2.27e-30 | 120 |
| Msa0620240 | AT1G27360.1 | 64.557 | 79 | 28 | 0 | 96 | 174 | 172 | 250 | 2.27e-30 | 120 |
| Msa0620240 | AT1G27360.3 | 64.557 | 79 | 28 | 0 | 96 | 174 | 172 | 250 | 2.27e-30 | 120 |
| Msa0620240 | AT1G27360.4 | 64.557 | 79 | 28 | 0 | 96 | 174 | 172 | 250 | 2.27e-30 | 120 |
| Msa0620240 | AT1G02065.1 | 63.095 | 84 | 31 | 0 | 89 | 172 | 178 | 261 | 5.39e-30 | 118 |
| Msa0620240 | AT2G33810.1 | 66.216 | 74 | 25 | 0 | 99 | 172 | 54 | 127 | 1.37e-29 | 111 |
| Msa0620240 | AT5G43270.3 | 59.302 | 86 | 35 | 0 | 90 | 175 | 160 | 245 | 1.56e-29 | 118 |
| Msa0620240 | AT5G43270.1 | 59.302 | 86 | 35 | 0 | 90 | 175 | 160 | 245 | 1.56e-29 | 118 |
| Msa0620240 | AT5G43270.2 | 59.302 | 86 | 35 | 0 | 90 | 175 | 160 | 245 | 1.56e-29 | 118 |
| Msa0620240 | AT3G15270.1 | 62.162 | 74 | 28 | 0 | 99 | 172 | 63 | 136 | 4.30e-28 | 109 |
| Msa0620240 | AT5G18830.3 | 44.944 | 89 | 48 | 1 | 86 | 173 | 125 | 213 | 1.33e-21 | 97.4 |
| Msa0620240 | AT5G18830.1 | 44.944 | 89 | 48 | 1 | 86 | 173 | 125 | 213 | 1.36e-21 | 97.4 |
| Msa0620240 | AT5G18830.2 | 44.944 | 89 | 48 | 1 | 86 | 173 | 125 | 213 | 1.39e-21 | 97.4 |
| Msa0620240 | AT2G47070.2 | 72.727 | 55 | 15 | 0 | 123 | 177 | 1 | 55 | 4.93e-21 | 95.9 |
| Msa0620240 | AT1G02065.2 | 41.837 | 98 | 49 | 3 | 57 | 146 | 138 | 235 | 9.94e-16 | 76.6 |
Find 121 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGTTTCTATGTTGTTTA+AGG | 0.109263 | 4_2:-71628289 | None:intergenic |
| TTTAAACTAACCTTGGTAAT+TGG | 0.163177 | 4_2:-71629414 | None:intergenic |
| GGGGTCTGTGGACTCAGTTT+TGG | 0.232288 | 4_2:+71631256 | Msa0620240:CDS |
| ATCTTCCTCCTCTTCTTATA+AGG | 0.234994 | 4_2:+71631415 | Msa0620240:three_prime_UTR |
| ACAATTTCATCTTCATAATA+AGG | 0.257583 | 4_2:+71627471 | Msa0620240:five_prime_UTR |
| ACACATGATCATCCTGAAAA+TGG | 0.265481 | 4_2:+71631161 | Msa0620240:CDS |
| AAGATGAATGAAACTGAAAA+AGG | 0.280302 | 4_2:-71627372 | None:intergenic |
| GATCATCAGCAAACAAATTA+AGG | 0.283399 | 4_2:-71631444 | None:intergenic |
| TCTTCATCATCTTCAACTTC+AGG | 0.292841 | 4_2:+71628453 | Msa0620240:CDS |
| TTTCAATGGGATTAGATTAG+AGG | 0.294187 | 4_2:+71631380 | Msa0620240:exon |
| AGAAGATAATTGTCATAATA+AGG | 0.299682 | 4_2:-71627238 | None:intergenic |
| GGTAAATCCACCAACATCTT+TGG | 0.300549 | 4_2:-71628421 | None:intergenic |
| TCCCATTGAAAAGGAAATAA+TGG | 0.301322 | 4_2:-71631368 | None:intergenic |
| AAGCTACTACTTCGAGTAAT+AGG | 0.322521 | 4_2:-71629386 | None:intergenic |
| AATGAAGTTCACATACCTTA+TGG | 0.332097 | 4_2:-71628581 | None:intergenic |
| TTCATGGGATTTAACTGAAA+TGG | 0.342436 | 4_2:+71628257 | Msa0620240:CDS |
| AAGATGTTGTTCCAAGAAAA+AGG | 0.342659 | 4_2:-71630929 | None:intergenic |
| AGATGATGAAGATGTCATTT+TGG | 0.350943 | 4_2:-71628442 | None:intergenic |
| GGAAATTCTAGCACTGAATC+AGG | 0.359546 | 4_2:+71628387 | Msa0620240:CDS |
| GATGGTTCAATTAGGAGGTT+TGG | 0.365880 | 4_2:+71628312 | Msa0620240:CDS |
| AGTTTGCATGACCATAGCTT+GGG | 0.365920 | 4_2:+71631236 | Msa0620240:CDS |
| CTTGGGTTGGAGGAGATGTT+AGG | 0.371034 | 4_2:+71630853 | Msa0620240:CDS |
| AAACAATGGATGGTTCAATT+AGG | 0.371347 | 4_2:+71628304 | Msa0620240:CDS |
| TTGAGAAGCATCTTGTGTTA+TGG | 0.372893 | 4_2:+71628212 | Msa0620240:intron |
| GGGTTCATCATAGCAGTAGA+AGG | 0.377531 | 4_2:-71630828 | None:intergenic |
| CTGCTATGATGAACCCTACT+TGG | 0.380036 | 4_2:+71630835 | Msa0620240:CDS |
| CTACTTCGAGTAATAGGTTC+TGG | 0.389750 | 4_2:-71629380 | None:intergenic |
| TTTCCCTTCTTTGTAGCTGC+TGG | 0.392060 | 4_2:-71630955 | None:intergenic |
| TTGTTCCTCAATTTATAACT+TGG | 0.392942 | 4_2:+71631301 | Msa0620240:CDS |
| CATTATTATTCCCCTGAGAA+TGG | 0.393387 | 4_2:-71631337 | None:intergenic |
| TTCTAGTGAATCCCATTCTC+AGG | 0.405544 | 4_2:+71631325 | Msa0620240:CDS |
| TAAATTATTATTATATTACT+TGG | 0.408494 | 4_2:+71627325 | Msa0620240:five_prime_UTR |
| CAGTGGCTGCTGCTGTTGGC+TGG | 0.413457 | 4_2:-71631001 | None:intergenic |
| GTAATTTGAAAGCACCTTCA+TGG | 0.414407 | 4_2:+71628241 | Msa0620240:CDS |
| TTCACAGTGGCTGCTGCTGT+TGG | 0.415317 | 4_2:-71631005 | None:intergenic |
| AAAAGAACCTGCTACATTGC+TGG | 0.422583 | 4_2:-71628650 | None:intergenic |
| TGATCATGTGTTTGTGGTAC+TGG | 0.432050 | 4_2:-71631149 | None:intergenic |
| GTTGGTGTTGATTGTGGCTA+TGG | 0.432534 | 4_2:-71630878 | None:intergenic |
| TTTGGAGATTACAGAACAAA+AGG | 0.434418 | 4_2:+71628330 | Msa0620240:CDS |
| ATCGTTTAAGAAAATCATAT+TGG | 0.435628 | 4_2:+71631537 | Msa0620240:three_prime_UTR |
| CACTTTGTCTTAATGCATGA+AGG | 0.437853 | 4_2:+71631498 | Msa0620240:three_prime_UTR |
| CAACCAGATGGTGCATTTGT+TGG | 0.454409 | 4_2:-71630896 | None:intergenic |
| ATTATTATTCCCCTGAGAAT+GGG | 0.465602 | 4_2:-71631336 | None:intergenic |
| GAGTTTGCATGACCATAGCT+TGG | 0.466352 | 4_2:+71631235 | Msa0620240:CDS |
| CTAATCTAATCCCATTGAAA+AGG | 0.467134 | 4_2:-71631377 | None:intergenic |
| CCATGAGTCGCACGTTTAGC+AGG | 0.467652 | 4_2:+71631051 | Msa0620240:CDS |
| CTTCATCATCTTCAACTTCA+GGG | 0.469448 | 4_2:+71628454 | Msa0620240:CDS |
| AACTTGAGAATGGTAGCAAT+TGG | 0.470856 | 4_2:-71630794 | None:intergenic |
| AATTGTGACCTGTGCAGTCT+TGG | 0.471856 | 4_2:-71628604 | None:intergenic |
| CGAGTAATAGGTTCTGGTTG+TGG | 0.475165 | 4_2:-71629374 | None:intergenic |
| AAGACTGCACAGGTCACAAT+TGG | 0.475432 | 4_2:+71628606 | Msa0620240:CDS |
| GTCTTAATGCATGAAGGCAA+TGG | 0.485388 | 4_2:+71631504 | Msa0620240:three_prime_UTR |
| TGTTCCTCAATTTATAACTT+GGG | 0.485493 | 4_2:+71631302 | Msa0620240:CDS |
| ATGAACCCTACTTGGGTTGG+AGG | 0.486277 | 4_2:+71630843 | Msa0620240:CDS |
| ATGAAGGAAAGAGGAGCTGT+AGG | 0.487258 | 4_2:+71629315 | Msa0620240:CDS |
| GTAACTGTAGAGACTATCAT+AGG | 0.493095 | 4_2:+71628556 | Msa0620240:CDS |
| TGACCATAGCTTGGGGTCTG+TGG | 0.493672 | 4_2:+71631244 | Msa0620240:CDS |
| GTCATGCAAACTCAAGCCTA+AGG | 0.500554 | 4_2:-71631225 | None:intergenic |
| TCAGATAGTTTCATGTCTTG+TGG | 0.502100 | 4_2:+71628512 | Msa0620240:CDS |
| CCTGCTAAACGTGCGACTCA+TGG | 0.502871 | 4_2:-71631051 | None:intergenic |
| CAATGGATGGTTCAATTAGG+AGG | 0.503930 | 4_2:+71628307 | Msa0620240:CDS |
| TCAACCAGCAGCTACAAAGA+AGG | 0.503966 | 4_2:+71630951 | Msa0620240:CDS |
| ACTTGAGAATGGTAGCAATT+GGG | 0.507340 | 4_2:-71630793 | None:intergenic |
| GTGCGACTCATGGATGAAGC+TGG | 0.513016 | 4_2:-71631041 | None:intergenic |
| TAATTTGAAAGCACCTTCAT+GGG | 0.516062 | 4_2:+71628242 | Msa0620240:CDS |
| ACACCAACAAATGCACCATC+TGG | 0.516097 | 4_2:+71630893 | Msa0620240:CDS |
| ACATCTCCTCCAACCCAAGT+AGG | 0.516216 | 4_2:-71630849 | None:intergenic |
| TGAAAGTTGAAGCTAAAACT+TGG | 0.518290 | 4_2:-71627413 | None:intergenic |
| CTGTATATGTAGCTTGAGAA+AGG | 0.518416 | 4_2:-71627267 | None:intergenic |
| GAGCTAGAGCTATCAACAAT+GGG | 0.520984 | 4_2:+71628487 | Msa0620240:CDS |
| AGACTATCATAGGCGCCATA+AGG | 0.522041 | 4_2:+71628566 | Msa0620240:CDS |
| TCAGGATGATCATGTGTTTG+TGG | 0.524418 | 4_2:-71631155 | None:intergenic |
| GCATTTGTTGGTGTTGATTG+TGG | 0.524493 | 4_2:-71630884 | None:intergenic |
| GATGAAATTGTGGATTTGAA+AGG | 0.525997 | 4_2:-71627459 | None:intergenic |
| AGCTGTAGGAAACGCTTAGA+TGG | 0.526456 | 4_2:+71629329 | Msa0620240:CDS |
| ACTGCACAGGTCACAATTGG+TGG | 0.532124 | 4_2:+71628609 | Msa0620240:CDS |
| AGGAATTTGATGAAGGAAAG+AGG | 0.537908 | 4_2:+71629306 | Msa0620240:CDS |
| AGAACCCAAGTTATAAATTG+AGG | 0.540593 | 4_2:-71631306 | None:intergenic |
| GGTTCTGCCAGCAATGTAGC+AGG | 0.542918 | 4_2:+71628643 | Msa0620240:CDS |
| ATAATTGTCATAATAAGGAC+AGG | 0.547826 | 4_2:-71627233 | None:intergenic |
| ATAGTTTCATGTCTTGTGGA+TGG | 0.552133 | 4_2:+71628516 | Msa0620240:CDS |
| CATCTCCTCCAACCCAAGTA+GGG | 0.552239 | 4_2:-71630848 | None:intergenic |
| CTCATGGATGAAGCTGGAAG+AGG | 0.554579 | 4_2:-71631035 | None:intergenic |
| GATTTAACTGAAATGGATCA+AGG | 0.556449 | 4_2:+71628264 | Msa0620240:CDS |
| TATACATGTGAACTTGAGAA+TGG | 0.557360 | 4_2:-71630804 | None:intergenic |
| GCTCTAGAGGAATTTGATGA+AGG | 0.560175 | 4_2:+71629299 | Msa0620240:CDS |
| TCATAATAAGGACAGGCTGT+TGG | 0.561129 | 4_2:-71627226 | None:intergenic |
| ACAAAGTCCAAAGATGTTGG+TGG | 0.562124 | 4_2:+71628414 | Msa0620240:CDS |
| CATCAAATTCCTCTAGAGCA+TGG | 0.562487 | 4_2:-71629295 | None:intergenic |
| CTTAAACAACATAGAAACAA+TGG | 0.562677 | 4_2:+71628290 | Msa0620240:CDS |
| TTATTATGAAGATGAAATTG+TGG | 0.562818 | 4_2:-71627469 | None:intergenic |
| ATGATGAACCCTACTTGGGT+TGG | 0.564738 | 4_2:+71630840 | Msa0620240:CDS |
| ATTTCAGTTAAATCCCATGA+AGG | 0.568024 | 4_2:-71628255 | None:intergenic |
| CTTACAAAGTCCAAAGATGT+TGG | 0.572874 | 4_2:+71628411 | Msa0620240:CDS |
| CAACCAGCAGCTACAAAGAA+GGG | 0.573578 | 4_2:+71630952 | Msa0620240:CDS |
| GACAACCTTATAAGAAGAGG+AGG | 0.573731 | 4_2:-71631420 | None:intergenic |
| TGCTATGATGAACCCTACTT+GGG | 0.579124 | 4_2:+71630836 | Msa0620240:CDS |
| GGTCTTGTTTATCAACCAGA+TGG | 0.579275 | 4_2:-71630908 | None:intergenic |
| AGAGCTAGAGCTATCAACAA+TGG | 0.587150 | 4_2:+71628486 | Msa0620240:CDS |
| GAAATTCTAGCACTGAATCA+GGG | 0.589286 | 4_2:+71628388 | Msa0620240:CDS |
| AGTCCACAGACCCCAAGCTA+TGG | 0.589981 | 4_2:-71631247 | None:intergenic |
| GTTTGCATGACCATAGCTTG+GGG | 0.604245 | 4_2:+71631237 | Msa0620240:CDS |
| GATTTGAAGCTTGGCCATGT+TGG | 0.605175 | 4_2:+71628366 | Msa0620240:CDS |
| GGTGACAACCTTATAAGAAG+AGG | 0.605811 | 4_2:-71631423 | None:intergenic |
| GTGTAGGTTCCATGCTCTAG+AGG | 0.610810 | 4_2:+71629286 | Msa0620240:intron |
| TCTAGTGAATCCCATTCTCA+GGG | 0.611691 | 4_2:+71631326 | Msa0620240:CDS |
| GATTTGAAAGGACAATTGTG+TGG | 0.618328 | 4_2:-71627447 | None:intergenic |
| GCTTAGATGGTCACAACCGA+CGG | 0.619901 | 4_2:+71629342 | Msa0620240:CDS |
| TCATGCAAACTCAAGCCTAA+GGG | 0.620270 | 4_2:-71631224 | None:intergenic |
| GTTGAAGCTAAAACTTGGAG+AGG | 0.621827 | 4_2:-71627408 | None:intergenic |
| GGTTCATCATAGCAGTAGAA+GGG | 0.627296 | 4_2:-71630827 | None:intergenic |
| TGAAAATGGATTGAATCAGA+TGG | 0.631963 | 4_2:+71631175 | Msa0620240:CDS |
| CAGTGCTAGAATTTCCAACA+TGG | 0.635549 | 4_2:-71628380 | None:intergenic |
| AACAACATAGAAACAATGGA+TGG | 0.636248 | 4_2:+71628294 | Msa0620240:CDS |
| ACTTCATTCCAAGACTGCAC+AGG | 0.639272 | 4_2:+71628596 | Msa0620240:CDS |
| CAATTGGTGGACATAAGCAA+AGG | 0.658162 | 4_2:+71628622 | Msa0620240:CDS |
| AAGCATCTTGTGTTATGGAG+TGG | 0.679671 | 4_2:+71628217 | Msa0620240:intron |
| TTGGGTTCAAATGATCAGAG+TGG | 0.682356 | 4_2:+71631275 | Msa0620240:CDS |
| AAGAGGTTGGTTGTTCACAG+TGG | 0.701313 | 4_2:-71631018 | None:intergenic |
| TGGATGAAGCTGGAAGAGGT+TGG | 0.704527 | 4_2:-71631031 | None:intergenic |
| CTAGTGAATCCCATTCTCAG+GGG | 0.746099 | 4_2:+71631327 | Msa0620240:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATAAAAAAAAAAAAAAAA+AGG | - | chr4_2:71627755-71627774 | None:intergenic | 0.0% |
| !! | TAAATTTCAAGATATAAAAT+AGG | - | chr4_2:71627993-71628012 | None:intergenic | 10.0% |
| !!! | TCTTTTTTACTAAAAATAGA+GGG | - | chr4_2:71627300-71627319 | None:intergenic | 15.0% |
| !!! | TTCTTTTTTACTAAAAATAG+AGG | - | chr4_2:71627301-71627320 | None:intergenic | 15.0% |
| !! | TGTAAAACAAAATGTAAAAA+AGG | - | chr4_2:71627693-71627712 | None:intergenic | 15.0% |
| !!! | TTTAAAGTGATAATAAATAG+AGG | - | chr4_2:71628029-71628048 | None:intergenic | 15.0% |
| !! | AAATAAAGAGAAAATTATGA+AGG | - | chr4_2:71628178-71628197 | None:intergenic | 15.0% |
| !! | TAGATAAATATTTAGATCAA+AGG | - | chr4_2:71629148-71629167 | None:intergenic | 15.0% |
| !!! | ATCTAACATTTGAAATTTAA+GGG | - | chr4_2:71630309-71630328 | None:intergenic | 15.0% |
| !!! | TATCTAACATTTGAAATTTA+AGG | - | chr4_2:71630310-71630329 | None:intergenic | 15.0% |
| !! | AAATAACCATTTATAACTTA+AGG | + | chr4_2:71630501-71630520 | Msa0620240:intron | 15.0% |
| !! | AATAACCATTTATAACTTAA+GGG | + | chr4_2:71630502-71630521 | Msa0620240:intron | 15.0% |
| !!! | CAACAATATATTTTTTTATC+AGG | + | chr4_2:71630768-71630787 | Msa0620240:intron | 15.0% |
| !! | AGAAGATAATTGTCATAATA+AGG | - | chr4_2:71627241-71627260 | None:intergenic | 20.0% |
| !! | TTATTATGAAGATGAAATTG+TGG | - | chr4_2:71627472-71627491 | None:intergenic | 20.0% |
| !! | ACAATTTCATCTTCATAATA+AGG | + | chr4_2:71627471-71627490 | Msa0620240:five_prime_UTR | 20.0% |
| !!! | GATTTTATGTTATATAGAGA+AGG | - | chr4_2:71627522-71627541 | None:intergenic | 20.0% |
| !! | ACATAATTTAGAAGTTTACT+AGG | - | chr4_2:71628798-71628817 | None:intergenic | 20.0% |
| !!! | ATTAACAAGTGTTTTAGTAA+GGG | - | chr4_2:71629002-71629021 | None:intergenic | 20.0% |
| !!! | AATTAACAAGTGTTTTAGTA+AGG | - | chr4_2:71629003-71629022 | None:intergenic | 20.0% |
| !!! | ATTTTATCTGATTTTGCATA+TGG | + | chr4_2:71629114-71629133 | Msa0620240:intron | 20.0% |
| !! | TACAAATACAATACAATACA+AGG | - | chr4_2:71629864-71629883 | None:intergenic | 20.0% |
| !!! | GAAATATCACTTCTTTTTTT+GGG | - | chr4_2:71629971-71629990 | None:intergenic | 20.0% |
| !!! | AGAAATATCACTTCTTTTTT+TGG | - | chr4_2:71629972-71629991 | None:intergenic | 20.0% |
| !! | TTAATAAATTAAACCAAACC+AGG | + | chr4_2:71630020-71630039 | Msa0620240:intron | 20.0% |
| !! | CTCATATAAAGTAGTATATA+TGG | - | chr4_2:71630116-71630135 | None:intergenic | 20.0% |
| !! | ATTATTCATGATTGAAATTC+CGG | + | chr4_2:71630194-71630213 | Msa0620240:intron | 20.0% |
| !! | AACATAAATAAGAGAATAAC+CGG | - | chr4_2:71630216-71630235 | None:intergenic | 20.0% |
| !! | TCCTTCTTGTTAAAATATAA+TGG | - | chr4_2:71630439-71630458 | None:intergenic | 20.0% |
| !! | ATAACCATTTATAACTTAAG+GGG | + | chr4_2:71630503-71630522 | Msa0620240:intron | 20.0% |
| !! | GAGATCAAATAAAATGAAAA+AGG | + | chr4_2:71630572-71630591 | Msa0620240:intron | 20.0% |
| !!! | GTTTCTTTTTTAATCATGTT+GGG | - | chr4_2:71630604-71630623 | None:intergenic | 20.0% |
| !!! | AGTTTCTTTTTTAATCATGT+TGG | - | chr4_2:71630605-71630624 | None:intergenic | 20.0% |
| !! | ATGATTAAAAAAGAAACTTG+AGG | + | chr4_2:71630607-71630626 | Msa0620240:intron | 20.0% |
| !! | TGATTAAAAAAGAAACTTGA+GGG | + | chr4_2:71630608-71630627 | Msa0620240:intron | 20.0% |
| !! | CTTTATCAGTATTAATGATT+TGG | + | chr4_2:71630678-71630697 | Msa0620240:intron | 20.0% |
| !!! | ATTTTGTATCTTTCTGAAAA+AGG | - | chr4_2:71631083-71631102 | None:intergenic | 20.0% |
| !!! | AATATGATTTTCTTAAACGA+TGG | - | chr4_2:71631538-71631557 | None:intergenic | 20.0% |
| !! | ATCGTTTAAGAAAATCATAT+TGG | + | chr4_2:71631537-71631556 | Msa0620240:three_prime_UTR | 20.0% |
| ! | ATAATTGTCATAATAAGGAC+AGG | - | chr4_2:71627236-71627255 | None:intergenic | 25.0% |
| ! | AGATGAATGAAACTGAAAAA+GGG | - | chr4_2:71627374-71627393 | None:intergenic | 25.0% |
| ! | AAGATGAATGAAACTGAAAA+AGG | - | chr4_2:71627375-71627394 | None:intergenic | 25.0% |
| ! | TTTCATCTTCATAATAAGGT+AGG | + | chr4_2:71627475-71627494 | Msa0620240:intron | 25.0% |
| ! | TTCATCTTCATAATAAGGTA+GGG | + | chr4_2:71627476-71627495 | Msa0620240:intron | 25.0% |
| ! | CTGAAAGTTACAAATTAAGA+GGG | - | chr4_2:71627808-71627827 | None:intergenic | 25.0% |
| ! | ACTGAAAGTTACAAATTAAG+AGG | - | chr4_2:71627809-71627828 | None:intergenic | 25.0% |
| !!! | TGTTTTTTTTTAGCACTCTT+TGG | + | chr4_2:71627885-71627904 | Msa0620240:intron | 25.0% |
| ! | TATGCAAACATAATAGACAT+TGG | - | chr4_2:71627963-71627982 | None:intergenic | 25.0% |
| ! | AATGTCTATTATGTTTGCAT+AGG | + | chr4_2:71627962-71627981 | Msa0620240:intron | 25.0% |
| ! | AGAGAAATTAACAACAACAT+TGG | - | chr4_2:71628072-71628091 | None:intergenic | 25.0% |
| !!! | CATTGTTTCTATGTTGTTTA+AGG | - | chr4_2:71628292-71628311 | None:intergenic | 25.0% |
| ! | CTTAAACAACATAGAAACAA+TGG | + | chr4_2:71628290-71628309 | Msa0620240:CDS | 25.0% |
| ! | ATGAAGTTAGCATGAATAAT+GGG | - | chr4_2:71628830-71628849 | None:intergenic | 25.0% |
| ! | TATGAAGTTAGCATGAATAA+TGG | - | chr4_2:71628831-71628850 | None:intergenic | 25.0% |
| !!! | TTGAGATTCCTTTTTTGTTA+AGG | - | chr4_2:71628929-71628948 | None:intergenic | 25.0% |
| ! | TCTACTAGTAAGATTTAGAT+GGG | - | chr4_2:71629201-71629220 | None:intergenic | 25.0% |
| ! | ATCTACTAGTAAGATTTAGA+TGG | - | chr4_2:71629202-71629221 | None:intergenic | 25.0% |
| !!! | AGTAGATTCTGAAATTAAAG+TGG | + | chr4_2:71629215-71629234 | Msa0620240:intron | 25.0% |
| !! | TTTAAACTAACCTTGGTAAT+TGG | - | chr4_2:71629417-71629436 | None:intergenic | 25.0% |
| ! | CTATAACTTTAAACTAACCT+TGG | - | chr4_2:71629424-71629443 | None:intergenic | 25.0% |
| ! | TCCAAATCTAGACAATTATT+GGG | - | chr4_2:71629472-71629491 | None:intergenic | 25.0% |
| ! | CAAAAATTACATAATGCACT+TGG | + | chr4_2:71629553-71629572 | Msa0620240:intron | 25.0% |
| !!! | CATGTTTGTTGTTTTAGTAA+TGG | - | chr4_2:71629673-71629692 | None:intergenic | 25.0% |
| ! | TCAATAATTCTTGCATCATT+CGG | + | chr4_2:71629809-71629828 | Msa0620240:intron | 25.0% |
| ! | CAAACGAAAAATAGACAAAA+GGG | - | chr4_2:71630392-71630411 | None:intergenic | 25.0% |
| ! | TCAAACGAAAAATAGACAAA+AGG | - | chr4_2:71630393-71630412 | None:intergenic | 25.0% |
| ! | GTTAAAATATAATGGCACAT+AGG | - | chr4_2:71630431-71630450 | None:intergenic | 25.0% |
| !!! | GCCATTATATTTTAACAAGA+AGG | + | chr4_2:71630435-71630454 | Msa0620240:intron | 25.0% |
| !! | TTTTAACAAGAAGGAAAAGA+AGG | + | chr4_2:71630444-71630463 | Msa0620240:intron | 25.0% |
| ! | TAACCATTTATAACTTAAGG+GGG | + | chr4_2:71630504-71630523 | Msa0620240:intron | 25.0% |
| !!! | GTTTTGTTTTCGTTATGAAA+AGG | + | chr4_2:71630702-71630721 | Msa0620240:intron | 25.0% |
| ! | TTGTTCCTCAATTTATAACT+TGG | + | chr4_2:71631301-71631320 | Msa0620240:CDS | 25.0% |
| ! | TGTTCCTCAATTTATAACTT+GGG | + | chr4_2:71631302-71631321 | Msa0620240:CDS | 25.0% |
| !! | TCCATTATTTCCTTTTCAAT+GGG | + | chr4_2:71631367-71631386 | Msa0620240:CDS | 25.0% |
| TGAAAGTTGAAGCTAAAACT+TGG | - | chr4_2:71627416-71627435 | None:intergenic | 30.0% | |
| GATGAAATTGTGGATTTGAA+AGG | - | chr4_2:71627462-71627481 | None:intergenic | 30.0% | |
| AAAAAAAAAGGCAGAAAGAG+AGG | - | chr4_2:71627544-71627563 | None:intergenic | 30.0% | |
| !! | AGCTCTTTAATTTGACTATC+TGG | + | chr4_2:71627621-71627640 | Msa0620240:intron | 30.0% |
| TGAAAGATGAAGAAGTAAAC+AGG | - | chr4_2:71627657-71627676 | None:intergenic | 30.0% | |
| TTTGTAACTTTCAGTTTCCT+TGG | + | chr4_2:71627814-71627833 | Msa0620240:intron | 30.0% | |
| ! | ACTCTCTCTTTTCCTTAATA+AGG | + | chr4_2:71627932-71627951 | Msa0620240:intron | 30.0% |
| !! | ACATTGGTTTGTCCTTATTA+AGG | - | chr4_2:71627947-71627966 | None:intergenic | 30.0% |
| AACTAGACACTTGCAAAAAT+AGG | - | chr4_2:71628144-71628163 | None:intergenic | 30.0% | |
| !! | TAATTTGAAAGCACCTTCAT+GGG | + | chr4_2:71628242-71628261 | Msa0620240:CDS | 30.0% |
| ATTTCAGTTAAATCCCATGA+AGG | - | chr4_2:71628258-71628277 | None:intergenic | 30.0% | |
| TTCATGGGATTTAACTGAAA+TGG | + | chr4_2:71628257-71628276 | Msa0620240:CDS | 30.0% | |
| GATTTAACTGAAATGGATCA+AGG | + | chr4_2:71628264-71628283 | Msa0620240:CDS | 30.0% | |
| AACAACATAGAAACAATGGA+TGG | + | chr4_2:71628294-71628313 | Msa0620240:CDS | 30.0% | |
| AAACAATGGATGGTTCAATT+AGG | + | chr4_2:71628304-71628323 | Msa0620240:CDS | 30.0% | |
| TTTGGAGATTACAGAACAAA+AGG | + | chr4_2:71628330-71628349 | Msa0620240:CDS | 30.0% | |
| !!! | TTTTCTGTTGATTTGAAGCT+TGG | + | chr4_2:71628357-71628376 | Msa0620240:CDS | 30.0% |
| !! | AGATGATGAAGATGTCATTT+TGG | - | chr4_2:71628445-71628464 | None:intergenic | 30.0% |
| AATGAAGTTCACATACCTTA+TGG | - | chr4_2:71628584-71628603 | None:intergenic | 30.0% | |
| ! | AATTTAGCCTTCATTAGAAG+AGG | + | chr4_2:71628891-71628910 | Msa0620240:intron | 30.0% |
| AGCACAATCCTTAACAAAAA+AGG | + | chr4_2:71628918-71628937 | Msa0620240:intron | 30.0% | |
| TTGGTTATAAATTCTCAACG+AGG | + | chr4_2:71629083-71629102 | Msa0620240:intron | 30.0% | |
| CTACTAGTAAGATTTAGATG+GGG | - | chr4_2:71629200-71629219 | None:intergenic | 30.0% | |
| TGGTGAAAATGATATTCTCT+AGG | + | chr4_2:71629235-71629254 | Msa0620240:intron | 30.0% | |
| GTAAGTTTCCTTAATTGTGT+AGG | + | chr4_2:71629270-71629289 | Msa0620240:intron | 30.0% | |
| TAGCTAACATATTATCTGAG+TGG | + | chr4_2:71629445-71629464 | Msa0620240:intron | 30.0% | |
| ACCCAATAATTGTCTAGATT+TGG | + | chr4_2:71629468-71629487 | Msa0620240:intron | 30.0% | |
| CTCCAAATCTAGACAATTAT+TGG | - | chr4_2:71629473-71629492 | None:intergenic | 30.0% | |
| TAAGATGTTTGTACCTATGT+GGG | - | chr4_2:71629515-71629534 | None:intergenic | 30.0% | |
| TTAAGATGTTTGTACCTATG+TGG | - | chr4_2:71629516-71629535 | None:intergenic | 30.0% | |
| TCATAAACATGGCAAATAAG+TGG | - | chr4_2:71629639-71629658 | None:intergenic | 30.0% | |
| TTTGACTGTGTGTAGTTAAT+TGG | + | chr4_2:71629899-71629918 | Msa0620240:intron | 30.0% | |
| ATAGTGCAGTAGTTATCTAT+AGG | + | chr4_2:71630243-71630262 | Msa0620240:intron | 30.0% | |
| TCTACTGTATTACTACATGA+AGG | - | chr4_2:71630729-71630748 | None:intergenic | 30.0% | |
| TATACATGTGAACTTGAGAA+TGG | - | chr4_2:71630807-71630826 | None:intergenic | 30.0% | |
| ! | GATAAACAAGACCTTTTTCT+TGG | + | chr4_2:71630918-71630937 | Msa0620240:CDS | 30.0% |
| AAGATGTTGTTCCAAGAAAA+AGG | - | chr4_2:71630932-71630951 | None:intergenic | 30.0% | |
| ! | GTATCTTTCTGAAAAAGGAT+TGG | - | chr4_2:71631078-71631097 | None:intergenic | 30.0% |
| ! | ATCTGATTCAATCCATTTTC+AGG | - | chr4_2:71631176-71631195 | None:intergenic | 30.0% |
| !! | TGAAAATGGATTGAATCAGA+TGG | + | chr4_2:71631175-71631194 | Msa0620240:CDS | 30.0% |
| AGAACCCAAGTTATAAATTG+AGG | - | chr4_2:71631309-71631328 | None:intergenic | 30.0% | |
| ATTATTATTCCCCTGAGAAT+GGG | - | chr4_2:71631339-71631358 | None:intergenic | 30.0% | |
| ! | CTCCATTATTTCCTTTTCAA+TGG | + | chr4_2:71631366-71631385 | Msa0620240:CDS | 30.0% |
| TCCCATTGAAAAGGAAATAA+TGG | - | chr4_2:71631371-71631390 | None:intergenic | 30.0% | |
| CTAATCTAATCCCATTGAAA+AGG | - | chr4_2:71631380-71631399 | None:intergenic | 30.0% | |
| TTTCAATGGGATTAGATTAG+AGG | + | chr4_2:71631380-71631399 | Msa0620240:exon | 30.0% | |
| GATCATCAGCAAACAAATTA+AGG | - | chr4_2:71631447-71631466 | None:intergenic | 30.0% | |
| CTGTATATGTAGCTTGAGAA+AGG | - | chr4_2:71627270-71627289 | None:intergenic | 35.0% | |
| GATTTGAAAGGACAATTGTG+TGG | - | chr4_2:71627450-71627469 | None:intergenic | 35.0% | |
| ATTGGCACTTTAATTGAGCA+AGG | - | chr4_2:71628054-71628073 | None:intergenic | 35.0% | |
| !! | TTGAGAAGCATCTTGTGTTA+TGG | + | chr4_2:71628212-71628231 | Msa0620240:intron | 35.0% |
| !! | GTAATTTGAAAGCACCTTCA+TGG | + | chr4_2:71628241-71628260 | Msa0620240:CDS | 35.0% |
| ! | GAAATTCTAGCACTGAATCA+GGG | + | chr4_2:71628388-71628407 | Msa0620240:CDS | 35.0% |
| CTTACAAAGTCCAAAGATGT+TGG | + | chr4_2:71628411-71628430 | Msa0620240:CDS | 35.0% | |
| TCTTCATCATCTTCAACTTC+AGG | + | chr4_2:71628453-71628472 | Msa0620240:CDS | 35.0% | |
| CTTCATCATCTTCAACTTCA+GGG | + | chr4_2:71628454-71628473 | Msa0620240:CDS | 35.0% | |
| TCAGATAGTTTCATGTCTTG+TGG | + | chr4_2:71628512-71628531 | Msa0620240:CDS | 35.0% | |
| ATAGTTTCATGTCTTGTGGA+TGG | + | chr4_2:71628516-71628535 | Msa0620240:CDS | 35.0% | |
| GTAACTGTAGAGACTATCAT+AGG | + | chr4_2:71628556-71628575 | Msa0620240:CDS | 35.0% | |
| TGACAAAGCATAACACACAA+GGG | - | chr4_2:71628703-71628722 | None:intergenic | 35.0% | |
| ATGACAAAGCATAACACACA+AGG | - | chr4_2:71628704-71628723 | None:intergenic | 35.0% | |
| CATACACACATGTTGTAACT+TGG | + | chr4_2:71629064-71629083 | Msa0620240:intron | 35.0% | |
| AGGAATTTGATGAAGGAAAG+AGG | + | chr4_2:71629306-71629325 | Msa0620240:CDS | 35.0% | |
| AAGCTACTACTTCGAGTAAT+AGG | - | chr4_2:71629389-71629408 | None:intergenic | 35.0% | |
| ! | AGCTTTTTGTCCAATTACCA+AGG | + | chr4_2:71629404-71629423 | Msa0620240:CDS | 35.0% |
| AAGATGTTTGTACCTATGTG+GGG | - | chr4_2:71629514-71629533 | None:intergenic | 35.0% | |
| AATTACATAATGCACTTGGC+TGG | + | chr4_2:71629557-71629576 | Msa0620240:intron | 35.0% | |
| CAAATAAGTGGACCAAATCA+AGG | - | chr4_2:71629627-71629646 | None:intergenic | 35.0% | |
| CCACTAGATTGTCATAAACA+TGG | - | chr4_2:71629650-71629669 | None:intergenic | 35.0% | |
| CCATGTTTATGACAATCTAG+TGG | + | chr4_2:71629647-71629666 | Msa0620240:intron | 35.0% | |
| !! | ACTTTTCAGCTTTTGAGTGA+GGG | + | chr4_2:71629726-71629745 | Msa0620240:intron | 35.0% |
| ! | GTTATCTATAGGTTTTGCTC+TGG | + | chr4_2:71630254-71630273 | Msa0620240:intron | 35.0% |
| AATGGCACATAGGAAACATT+TGG | - | chr4_2:71630421-71630440 | None:intergenic | 35.0% | |
| TTGCCCCCTTAAGTTATAAA+TGG | - | chr4_2:71630510-71630529 | None:intergenic | 35.0% | |
| ACTTGAGAATGGTAGCAATT+GGG | - | chr4_2:71630796-71630815 | None:intergenic | 35.0% | |
| AACTTGAGAATGGTAGCAAT+TGG | - | chr4_2:71630797-71630816 | None:intergenic | 35.0% | |
| ACACATGATCATCCTGAAAA+TGG | + | chr4_2:71631161-71631180 | Msa0620240:CDS | 35.0% | |
| ! | TCATCTTTTATGCAACCCTT+AGG | + | chr4_2:71631209-71631228 | Msa0620240:CDS | 35.0% |
| CATTATTATTCCCCTGAGAA+TGG | - | chr4_2:71631340-71631359 | None:intergenic | 35.0% | |
| ATCTTCCTCCTCTTCTTATA+AGG | + | chr4_2:71631415-71631434 | Msa0620240:three_prime_UTR | 35.0% | |
| CACTTTGTCTTAATGCATGA+AGG | + | chr4_2:71631498-71631517 | Msa0620240:three_prime_UTR | 35.0% | |
| TCATAATAAGGACAGGCTGT+TGG | - | chr4_2:71627229-71627248 | None:intergenic | 40.0% | |
| GTTGAAGCTAAAACTTGGAG+AGG | - | chr4_2:71627411-71627430 | None:intergenic | 40.0% | |
| !! | TTTTTAGCACTCTTTGGTGC+AGG | + | chr4_2:71627891-71627910 | Msa0620240:intron | 40.0% |
| AAGCATCTTGTGTTATGGAG+TGG | + | chr4_2:71628217-71628236 | Msa0620240:intron | 40.0% | |
| CAATGGATGGTTCAATTAGG+AGG | + | chr4_2:71628307-71628326 | Msa0620240:CDS | 40.0% | |
| GATGGTTCAATTAGGAGGTT+TGG | + | chr4_2:71628312-71628331 | Msa0620240:CDS | 40.0% | |
| CAGTGCTAGAATTTCCAACA+TGG | - | chr4_2:71628383-71628402 | None:intergenic | 40.0% | |
| ! | GGAAATTCTAGCACTGAATC+AGG | + | chr4_2:71628387-71628406 | Msa0620240:CDS | 40.0% |
| ACAAAGTCCAAAGATGTTGG+TGG | + | chr4_2:71628414-71628433 | Msa0620240:CDS | 40.0% | |
| GGTAAATCCACCAACATCTT+TGG | - | chr4_2:71628424-71628443 | None:intergenic | 40.0% | |
| AGAGCTAGAGCTATCAACAA+TGG | + | chr4_2:71628486-71628505 | Msa0620240:CDS | 40.0% | |
| GAGCTAGAGCTATCAACAAT+GGG | + | chr4_2:71628487-71628506 | Msa0620240:CDS | 40.0% | |
| ! | CAATTGGTGGACATAAGCAA+AGG | + | chr4_2:71628622-71628641 | Msa0620240:CDS | 40.0% |
| AAAAGAACCTGCTACATTGC+TGG | - | chr4_2:71628653-71628672 | None:intergenic | 40.0% | |
| GGGGAAACACAAAAAGCTTA+TGG | - | chr4_2:71628683-71628702 | None:intergenic | 40.0% | |
| GACAAAGCATAACACACAAG+GGG | - | chr4_2:71628702-71628721 | None:intergenic | 40.0% | |
| GCTTCTACCTCTTCTAATGA+AGG | - | chr4_2:71628901-71628920 | None:intergenic | 40.0% | |
| GCATGGAACCTACACAATTA+AGG | - | chr4_2:71629281-71629300 | None:intergenic | 40.0% | |
| !! | CATCAAATTCCTCTAGAGCA+TGG | - | chr4_2:71629298-71629317 | None:intergenic | 40.0% |
| !! | GCTCTAGAGGAATTTGATGA+AGG | + | chr4_2:71629299-71629318 | Msa0620240:CDS | 40.0% |
| CTACTTCGAGTAATAGGTTC+TGG | - | chr4_2:71629383-71629402 | None:intergenic | 40.0% | |
| TAAGTGGACCAAATCAAGGA+TGG | - | chr4_2:71629623-71629642 | None:intergenic | 40.0% | |
| !! | GACTTTTCAGCTTTTGAGTG+AGG | + | chr4_2:71629725-71629744 | Msa0620240:intron | 40.0% |
| GGTTCATCATAGCAGTAGAA+GGG | - | chr4_2:71630830-71630849 | None:intergenic | 40.0% | |
| TGCTATGATGAACCCTACTT+GGG | + | chr4_2:71630836-71630855 | Msa0620240:CDS | 40.0% | |
| !! | GCATTTGTTGGTGTTGATTG+TGG | - | chr4_2:71630887-71630906 | None:intergenic | 40.0% |
| !! | GGTCTTGTTTATCAACCAGA+TGG | - | chr4_2:71630911-71630930 | None:intergenic | 40.0% |
| TGATCATGTGTTTGTGGTAC+TGG | - | chr4_2:71631152-71631171 | None:intergenic | 40.0% | |
| TCAGGATGATCATGTGTTTG+TGG | - | chr4_2:71631158-71631177 | None:intergenic | 40.0% | |
| TCATGCAAACTCAAGCCTAA+GGG | - | chr4_2:71631227-71631246 | None:intergenic | 40.0% | |
| AGTTTGCATGACCATAGCTT+GGG | + | chr4_2:71631236-71631255 | Msa0620240:CDS | 40.0% | |
| TTGGGTTCAAATGATCAGAG+TGG | + | chr4_2:71631275-71631294 | Msa0620240:CDS | 40.0% | |
| TTCTAGTGAATCCCATTCTC+AGG | + | chr4_2:71631325-71631344 | Msa0620240:CDS | 40.0% | |
| TCTAGTGAATCCCATTCTCA+GGG | + | chr4_2:71631326-71631345 | Msa0620240:CDS | 40.0% | |
| GACAACCTTATAAGAAGAGG+AGG | - | chr4_2:71631423-71631442 | None:intergenic | 40.0% | |
| GGTGACAACCTTATAAGAAG+AGG | - | chr4_2:71631426-71631445 | None:intergenic | 40.0% | |
| GTCTTAATGCATGAAGGCAA+TGG | + | chr4_2:71631504-71631523 | Msa0620240:three_prime_UTR | 40.0% | |
| ! | GATTTGAAGCTTGGCCATGT+TGG | + | chr4_2:71628366-71628385 | Msa0620240:CDS | 45.0% |
| AGACTATCATAGGCGCCATA+AGG | + | chr4_2:71628566-71628585 | Msa0620240:CDS | 45.0% | |
| ACTTCATTCCAAGACTGCAC+AGG | + | chr4_2:71628596-71628615 | Msa0620240:CDS | 45.0% | |
| AATTGTGACCTGTGCAGTCT+TGG | - | chr4_2:71628607-71628626 | None:intergenic | 45.0% | |
| AAGACTGCACAGGTCACAAT+TGG | + | chr4_2:71628606-71628625 | Msa0620240:CDS | 45.0% | |
| ATGAAGGAAAGAGGAGCTGT+AGG | + | chr4_2:71629315-71629334 | Msa0620240:CDS | 45.0% | |
| AGCTGTAGGAAACGCTTAGA+TGG | + | chr4_2:71629329-71629348 | Msa0620240:CDS | 45.0% | |
| ! | GTTGTGGTTTTCTTCTCCGT+CGG | - | chr4_2:71629361-71629380 | None:intergenic | 45.0% |
| ! | CGAGTAATAGGTTCTGGTTG+TGG | - | chr4_2:71629377-71629396 | None:intergenic | 45.0% |
| ! | TTTGGAGCAGACAATTGCTG+AGG | + | chr4_2:71629486-71629505 | Msa0620240:intron | 45.0% |
| TGGACCAAATCAAGGATGGT+GGG | - | chr4_2:71629619-71629638 | None:intergenic | 45.0% | |
| ACTAGATACGACACCTGGTT+TGG | - | chr4_2:71630036-71630055 | None:intergenic | 45.0% | |
| TAGACACTAGATACGACACC+TGG | - | chr4_2:71630041-71630060 | None:intergenic | 45.0% | |
| GGGTTCATCATAGCAGTAGA+AGG | - | chr4_2:71630831-71630850 | None:intergenic | 45.0% | |
| CTGCTATGATGAACCCTACT+TGG | + | chr4_2:71630835-71630854 | Msa0620240:CDS | 45.0% | |
| ATGATGAACCCTACTTGGGT+TGG | + | chr4_2:71630840-71630859 | Msa0620240:CDS | 45.0% | |
| !! | GTTGGTGTTGATTGTGGCTA+TGG | - | chr4_2:71630881-71630900 | None:intergenic | 45.0% |
| ACACCAACAAATGCACCATC+TGG | + | chr4_2:71630893-71630912 | Msa0620240:CDS | 45.0% | |
| CAACCAGATGGTGCATTTGT+TGG | - | chr4_2:71630899-71630918 | None:intergenic | 45.0% | |
| TCAACCAGCAGCTACAAAGA+AGG | + | chr4_2:71630951-71630970 | Msa0620240:CDS | 45.0% | |
| CAACCAGCAGCTACAAAGAA+GGG | + | chr4_2:71630952-71630971 | Msa0620240:CDS | 45.0% | |
| TTTCCCTTCTTTGTAGCTGC+TGG | - | chr4_2:71630958-71630977 | None:intergenic | 45.0% | |
| ! | AAGAGGTTGGTTGTTCACAG+TGG | - | chr4_2:71631021-71631040 | None:intergenic | 45.0% |
| GTCATGCAAACTCAAGCCTA+AGG | - | chr4_2:71631228-71631247 | None:intergenic | 45.0% | |
| GAGTTTGCATGACCATAGCT+TGG | + | chr4_2:71631235-71631254 | Msa0620240:CDS | 45.0% | |
| GTTTGCATGACCATAGCTTG+GGG | + | chr4_2:71631237-71631256 | Msa0620240:CDS | 45.0% | |
| CTAGTGAATCCCATTCTCAG+GGG | + | chr4_2:71631327-71631346 | Msa0620240:CDS | 45.0% | |
| !! | TAAATTATTATTATATTACT+TGG | + | chr4_2:71627325-71627344 | Msa0620240:five_prime_UTR | 5.0% |
| !! | TAAAATAAAACAAAAAAAAA+AGG | - | chr4_2:71627556-71627575 | None:intergenic | 5.0% |
| TCCTTGGAACTCTCTCAGCT+TGG | + | chr4_2:71627830-71627849 | Msa0620240:intron | 50.0% | |
| ACTGCACAGGTCACAATTGG+TGG | + | chr4_2:71628609-71628628 | Msa0620240:CDS | 50.0% | |
| GTGTAGGTTCCATGCTCTAG+AGG | + | chr4_2:71629286-71629305 | Msa0620240:intron | 50.0% | |
| GCTTAGATGGTCACAACCGA+CGG | + | chr4_2:71629342-71629361 | Msa0620240:CDS | 50.0% | |
| ATTGCTGAGGATCCCCACAT+AGG | + | chr4_2:71629499-71629518 | Msa0620240:intron | 50.0% | |
| ACATAATGCACTTGGCTGGC+TGG | + | chr4_2:71629561-71629580 | Msa0620240:intron | 50.0% | |
| GTGGACCAAATCAAGGATGG+TGG | - | chr4_2:71629620-71629639 | None:intergenic | 50.0% | |
| !! | ATGAACCCTACTTGGGTTGG+AGG | + | chr4_2:71630843-71630862 | Msa0620240:CDS | 50.0% |
| CATCTCCTCCAACCCAAGTA+GGG | - | chr4_2:71630851-71630870 | None:intergenic | 50.0% | |
| ACATCTCCTCCAACCCAAGT+AGG | - | chr4_2:71630852-71630871 | None:intergenic | 50.0% | |
| !! | CTTGGGTTGGAGGAGATGTT+AGG | + | chr4_2:71630853-71630872 | Msa0620240:CDS | 50.0% |
| TGGATGAAGCTGGAAGAGGT+TGG | - | chr4_2:71631034-71631053 | None:intergenic | 50.0% | |
| CTCATGGATGAAGCTGGAAG+AGG | - | chr4_2:71631038-71631057 | None:intergenic | 50.0% | |
| ! | GGGTCTGTGGACTCAGTTTT+GGG | + | chr4_2:71631257-71631276 | Msa0620240:CDS | 50.0% |
| GCCAAGCTGAGAGAGTTCCA+AGG | - | chr4_2:71627834-71627853 | None:intergenic | 55.0% | |
| GGTTCTGCCAGCAATGTAGC+AGG | + | chr4_2:71628643-71628662 | Msa0620240:CDS | 55.0% | |
| !! | ATCAAGGATGGTGGGCAGCA+TGG | - | chr4_2:71629611-71629630 | None:intergenic | 55.0% |
| GCTGCCCACCATCCTTGATT+TGG | + | chr4_2:71629612-71629631 | Msa0620240:intron | 55.0% | |
| TTCACAGTGGCTGCTGCTGT+TGG | - | chr4_2:71631008-71631027 | None:intergenic | 55.0% | |
| GTGCGACTCATGGATGAAGC+TGG | - | chr4_2:71631044-71631063 | None:intergenic | 55.0% | |
| CCTGCTAAACGTGCGACTCA+TGG | - | chr4_2:71631054-71631073 | None:intergenic | 55.0% | |
| CCATGAGTCGCACGTTTAGC+AGG | + | chr4_2:71631051-71631070 | Msa0620240:CDS | 55.0% | |
| TGACCATAGCTTGGGGTCTG+TGG | + | chr4_2:71631244-71631263 | Msa0620240:CDS | 55.0% | |
| AGTCCACAGACCCCAAGCTA+TGG | - | chr4_2:71631250-71631269 | None:intergenic | 55.0% | |
| ! | GGGGTCTGTGGACTCAGTTT+TGG | + | chr4_2:71631256-71631275 | Msa0620240:CDS | 55.0% |
| ! | AATGCACTTGGCTGGCTGGC+TGG | + | chr4_2:71629565-71629584 | Msa0620240:intron | 60.0% |
| GGTGGGCAGCATGGTGAGTG+AGG | - | chr4_2:71629602-71629621 | None:intergenic | 65.0% | |
| CAGTGGCTGCTGCTGTTGGC+TGG | - | chr4_2:71631004-71631023 | None:intergenic | 65.0% | |
| ! | CACTTGGCTGGCTGGCTGGC+TGG | + | chr4_2:71629569-71629588 | Msa0620240:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 71627203 | 71631560 | 71627203 | ID=Msa0620240;Name=Msa0620240 |
| chr4_2 | mRNA | 71627203 | 71631560 | 71627203 | ID=Msa0620240-mRNA-1;Parent=Msa0620240;Name=Msa0620240-mRNA-1;_AED=0.16;_eAED=0.16;_QI=301|1|1|1|0.66|0.5|4|166|390 |
| chr4_2 | exon | 71627203 | 71627492 | 71627203 | ID=Msa0620240-mRNA-1:exon:21197;Parent=Msa0620240-mRNA-1 |
| chr4_2 | exon | 71628220 | 71628664 | 71628220 | ID=Msa0620240-mRNA-1:exon:21198;Parent=Msa0620240-mRNA-1 |
| chr4_2 | exon | 71629292 | 71629425 | 71629292 | ID=Msa0620240-mRNA-1:exon:21199;Parent=Msa0620240-mRNA-1 |
| chr4_2 | exon | 71630790 | 71631560 | 71630790 | ID=Msa0620240-mRNA-1:exon:21200;Parent=Msa0620240-mRNA-1 |
| chr4_2 | five_prime_UTR | 71627203 | 71627492 | 71627203 | ID=Msa0620240-mRNA-1:five_prime_utr;Parent=Msa0620240-mRNA-1 |
| chr4_2 | five_prime_UTR | 71628220 | 71628230 | 71628220 | ID=Msa0620240-mRNA-1:five_prime_utr;Parent=Msa0620240-mRNA-1 |
| chr4_2 | CDS | 71628231 | 71628664 | 71628231 | ID=Msa0620240-mRNA-1:cds;Parent=Msa0620240-mRNA-1 |
| chr4_2 | CDS | 71629292 | 71629425 | 71629292 | ID=Msa0620240-mRNA-1:cds;Parent=Msa0620240-mRNA-1 |
| chr4_2 | CDS | 71630790 | 71631394 | 71630790 | ID=Msa0620240-mRNA-1:cds;Parent=Msa0620240-mRNA-1 |
| chr4_2 | three_prime_UTR | 71631395 | 71631560 | 71631395 | ID=Msa0620240-mRNA-1:three_prime_utr;Parent=Msa0620240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
