Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1133000 | XP_024628067.1 | 98.974 | 390 | 4 | 0 | 1 | 390 | 1 | 390 | 0.0 | 807 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1133000 | sp|P0DI11|SP13B_ARATH | 48.084 | 287 | 123 | 9 | 1 | 268 | 1 | 280 | 5.51e-70 | 227 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1133000 | A0A072TVW9 | 98.974 | 390 | 4 | 0 | 1 | 390 | 1 | 390 | 0.0 | 807 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1133000 | TF | SBP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa1133000 | 0.832794 | 7.712763e-56 | -8.615850e-47 |
| Msa0002930 | Msa1133000 | 0.823119 | 1.644069e-53 | -8.615850e-47 |
| Msa0003700 | Msa1133000 | 0.820287 | 7.427615e-53 | -8.615850e-47 |
| Msa0004860 | Msa1133000 | 0.801257 | 9.804772e-49 | -8.615850e-47 |
| Msa0004920 | Msa1133000 | 0.821867 | 3.212845e-53 | -8.615850e-47 |
| Msa0016670 | Msa1133000 | 0.829808 | 4.185172e-55 | -8.615850e-47 |
| Msa0017510 | Msa1133000 | 0.853600 | 2.146388e-61 | -8.615850e-47 |
| Msa0028640 | Msa1133000 | 0.817348 | 3.455630e-52 | -8.615850e-47 |
| Msa0032840 | Msa1133000 | -0.820614 | 6.249415e-53 | -8.615850e-47 |
| Msa0034270 | Msa1133000 | 0.831562 | 1.556244e-55 | -8.615850e-47 |
| Msa0036430 | Msa1133000 | 0.825527 | 4.464922e-54 | -8.615850e-47 |
| Msa0036850 | Msa1133000 | 0.801530 | 8.622119e-49 | -8.615850e-47 |
| Msa0040450 | Msa1133000 | 0.826271 | 2.973707e-54 | -8.615850e-47 |
| Msa0044020 | Msa1133000 | 0.825089 | 5.667593e-54 | -8.615850e-47 |
| Msa0046100 | Msa1133000 | 0.813884 | 2.041591e-51 | -8.615850e-47 |
| Msa0046750 | Msa1133000 | 0.803940 | 2.742380e-49 | -8.615850e-47 |
| Msa0051770 | Msa1133000 | 0.811613 | 6.412526e-51 | -8.615850e-47 |
| Msa0053110 | Msa1133000 | 0.816771 | 4.658176e-52 | -8.615850e-47 |
| Msa0072370 | Msa1133000 | 0.817757 | 2.794519e-52 | -8.615850e-47 |
| Msa0072810 | Msa1133000 | 0.802520 | 5.394712e-49 | -8.615850e-47 |
| Msa0078650 | Msa1133000 | 0.807750 | 4.338693e-50 | -8.615850e-47 |
| Msa0081360 | Msa1133000 | 0.803970 | 2.703846e-49 | -8.615850e-47 |
| Msa0081480 | Msa1133000 | 0.800357 | 1.496654e-48 | -8.615850e-47 |
| Msa0084500 | Msa1133000 | 0.806958 | 6.388139e-50 | -8.615850e-47 |
| Msa0090590 | Msa1133000 | 0.803049 | 4.196353e-49 | -8.615850e-47 |
| Msa0094120 | Msa1133000 | 0.821055 | 4.949256e-53 | -8.615850e-47 |
| Msa0098440 | Msa1133000 | 0.827031 | 1.958552e-54 | -8.615850e-47 |
| Msa0103000 | Msa1133000 | 0.826747 | 2.288925e-54 | -8.615850e-47 |
| Msa0105420 | Msa1133000 | 0.816620 | 5.033274e-52 | -8.615850e-47 |
| Msa0106790 | Msa1133000 | 0.804702 | 1.902779e-49 | -8.615850e-47 |
| Msa0110970 | Msa1133000 | 0.868000 | 9.034641e-66 | -8.615850e-47 |
| Msa0114540 | Msa1133000 | -0.822804 | 1.947051e-53 | -8.615850e-47 |
| Msa0118400 | Msa1133000 | 0.816292 | 5.962465e-52 | -8.615850e-47 |
| Msa0118570 | Msa1133000 | 0.804491 | 2.105885e-49 | -8.615850e-47 |
| Msa0616220 | Msa1133000 | 0.822791 | 1.960527e-53 | -8.615850e-47 |
| Msa0618040 | Msa1133000 | 0.812682 | 3.749506e-51 | -8.615850e-47 |
| Msa0620240 | Msa1133000 | 0.998745 | 4.585392e-275 | -8.615850e-47 |
| Msa0620990 | Msa1133000 | 0.802753 | 4.831379e-49 | -8.615850e-47 |
| Msa0627450 | Msa1133000 | 0.800420 | 1.453300e-48 | -8.615850e-47 |
| Msa0631120 | Msa1133000 | 0.829676 | 4.504849e-55 | -8.615850e-47 |
| Msa0649980 | Msa1133000 | 0.801202 | 1.006216e-48 | -8.615850e-47 |
| Msa0650020 | Msa1133000 | 0.805303 | 1.425038e-49 | -8.615850e-47 |
| Msa0650090 | Msa1133000 | 0.802404 | 5.702372e-49 | -8.615850e-47 |
| Msa0657970 | Msa1133000 | 0.815674 | 8.189875e-52 | -8.615850e-47 |
| Msa0669340 | Msa1133000 | 0.808018 | 3.806600e-50 | -8.615850e-47 |
| Msa0677290 | Msa1133000 | 0.803985 | 2.684372e-49 | -8.615850e-47 |
| Msa0682330 | Msa1133000 | 0.820549 | 6.469755e-53 | -8.615850e-47 |
| Msa0683510 | Msa1133000 | 0.813451 | 2.542831e-51 | -8.615850e-47 |
| Msa0683570 | Msa1133000 | 0.810693 | 1.015225e-50 | -8.615850e-47 |
| Msa0684500 | Msa1133000 | 0.826292 | 2.938335e-54 | -8.615850e-47 |
| Msa0685330 | Msa1133000 | 0.800776 | 1.229877e-48 | -8.615850e-47 |
| Msa0692080 | Msa1133000 | 0.822013 | 2.972646e-53 | -8.615850e-47 |
| Msa0699550 | Msa1133000 | 0.825277 | 5.116352e-54 | -8.615850e-47 |
| Msa0701280 | Msa1133000 | 0.803222 | 3.863590e-49 | -8.615850e-47 |
| Msa0703230 | Msa1133000 | 0.805179 | 1.512287e-49 | -8.615850e-47 |
| Msa0704600 | Msa1133000 | 0.803118 | 4.060679e-49 | -8.615850e-47 |
| Msa0705870 | Msa1133000 | 0.805468 | 1.315634e-49 | -8.615850e-47 |
| Msa0707220 | Msa1133000 | 0.806997 | 6.266963e-50 | -8.615850e-47 |
| Msa0708520 | Msa1133000 | 0.825869 | 3.705226e-54 | -8.615850e-47 |
| Msa0716760 | Msa1133000 | 0.804106 | 2.532392e-49 | -8.615850e-47 |
| Msa0727710 | Msa1133000 | 0.802291 | 6.015866e-49 | -8.615850e-47 |
| Msa0741900 | Msa1133000 | 0.815410 | 9.379735e-52 | -8.615850e-47 |
| Msa0747780 | Msa1133000 | 0.809705 | 1.657765e-50 | -8.615850e-47 |
| Msa0749760 | Msa1133000 | 0.823576 | 1.286055e-53 | -8.615850e-47 |
| Msa0754720 | Msa1133000 | -0.807781 | 4.274573e-50 | -8.615850e-47 |
| Msa0756630 | Msa1133000 | -0.828251 | 9.974113e-55 | -8.615850e-47 |
| Msa0760380 | Msa1133000 | 0.835501 | 1.617398e-56 | -8.615850e-47 |
| Msa0780250 | Msa1133000 | 0.818137 | 2.292997e-52 | -8.615850e-47 |
| Msa0804680 | Msa1133000 | 0.811219 | 7.809798e-51 | -8.615850e-47 |
| Msa0822990 | Msa1133000 | 0.826594 | 2.490492e-54 | -8.615850e-47 |
| Msa0824660 | Msa1133000 | 0.838976 | 2.087673e-57 | -8.615850e-47 |
| Msa0124340 | Msa1133000 | 0.842353 | 2.723953e-58 | -8.615850e-47 |
| Msa0130570 | Msa1133000 | 0.825004 | 5.936604e-54 | -8.615850e-47 |
| Msa0140570 | Msa1133000 | 0.805524 | 1.280689e-49 | -8.615850e-47 |
| Msa0140780 | Msa1133000 | 0.816586 | 5.123080e-52 | -8.615850e-47 |
| Msa0141600 | Msa1133000 | 0.805906 | 1.064377e-49 | -8.615850e-47 |
| Msa0143430 | Msa1133000 | 0.800207 | 1.605737e-48 | -8.615850e-47 |
| Msa0146260 | Msa1133000 | 0.832406 | 9.624887e-56 | -8.615850e-47 |
| Msa0147560 | Msa1133000 | 0.816855 | 4.459859e-52 | -8.615850e-47 |
| Msa0150570 | Msa1133000 | 0.802829 | 4.658796e-49 | -8.615850e-47 |
| Msa0153420 | Msa1133000 | 0.821842 | 3.255995e-53 | -8.615850e-47 |
| Msa0157290 | Msa1133000 | 0.853313 | 2.594473e-61 | -8.615850e-47 |
| Msa0171290 | Msa1133000 | 0.811715 | 6.095053e-51 | -8.615850e-47 |
| Msa0172350 | Msa1133000 | 0.803267 | 3.782559e-49 | -8.615850e-47 |
| Msa0173660 | Msa1133000 | 0.806292 | 8.830633e-50 | -8.615850e-47 |
| Msa0173990 | Msa1133000 | 0.808450 | 3.078388e-50 | -8.615850e-47 |
| Msa0186890 | Msa1133000 | 0.801083 | 1.064300e-48 | -8.615850e-47 |
| Msa0197890 | Msa1133000 | 0.802409 | 5.688228e-49 | -8.615850e-47 |
| Msa0197930 | Msa1133000 | 0.812509 | 4.091365e-51 | -8.615850e-47 |
| Msa0200260 | Msa1133000 | 0.812115 | 4.987687e-51 | -8.615850e-47 |
| Msa0202950 | Msa1133000 | 0.816576 | 5.149472e-52 | -8.615850e-47 |
| Msa0203030 | Msa1133000 | 0.828516 | 8.607088e-55 | -8.615850e-47 |
| Msa0204980 | Msa1133000 | 0.800335 | 1.512300e-48 | -8.615850e-47 |
| Msa0219190 | Msa1133000 | 0.807148 | 5.824004e-50 | -8.615850e-47 |
| Msa0225740 | Msa1133000 | 0.824712 | 6.956563e-54 | -8.615850e-47 |
| Msa0230550 | Msa1133000 | -0.817427 | 3.316201e-52 | -8.615850e-47 |
| Msa0366240 | Msa1133000 | 0.802489 | 5.477000e-49 | -8.615850e-47 |
| Msa0369850 | Msa1133000 | 0.811112 | 8.241320e-51 | -8.615850e-47 |
| Msa0395870 | Msa1133000 | 0.822996 | 1.756228e-53 | -8.615850e-47 |
| Msa0402330 | Msa1133000 | 0.809353 | 1.973049e-50 | -8.615850e-47 |
| Msa0410500 | Msa1133000 | 0.838980 | 2.083311e-57 | -8.615850e-47 |
| Msa0410650 | Msa1133000 | 0.828522 | 8.578758e-55 | -8.615850e-47 |
| Msa0414170 | Msa1133000 | 0.807744 | 4.351275e-50 | -8.615850e-47 |
| Msa0414950 | Msa1133000 | -0.809308 | 2.017704e-50 | -8.615850e-47 |
| Msa0417880 | Msa1133000 | 0.836175 | 1.091738e-56 | -8.615850e-47 |
| Msa0419820 | Msa1133000 | 0.838625 | 2.573461e-57 | -8.615850e-47 |
| Msa0422850 | Msa1133000 | 0.801596 | 8.357068e-49 | -8.615850e-47 |
| Msa0423900 | Msa1133000 | 0.809529 | 1.808965e-50 | -8.615850e-47 |
| Msa0432770 | Msa1133000 | 0.805228 | 1.477192e-49 | -8.615850e-47 |
| Msa0433640 | Msa1133000 | 0.816023 | 6.846033e-52 | -8.615850e-47 |
| Msa0436280 | Msa1133000 | -0.814544 | 1.459308e-51 | -8.615850e-47 |
| Msa0436460 | Msa1133000 | 0.800919 | 1.150016e-48 | -8.615850e-47 |
| Msa0436500 | Msa1133000 | 0.824502 | 7.796592e-54 | -8.615850e-47 |
| Msa0461720 | Msa1133000 | 0.837665 | 4.544904e-57 | -8.615850e-47 |
| Msa0461730 | Msa1133000 | 0.803834 | 2.884691e-49 | -8.615850e-47 |
| Msa0469030 | Msa1133000 | 0.801243 | 9.869072e-49 | -8.615850e-47 |
| Msa0475790 | Msa1133000 | 0.816141 | 6.445257e-52 | -8.615850e-47 |
| Msa0480000 | Msa1133000 | 0.806213 | 9.173417e-50 | -8.615850e-47 |
| Msa0480980 | Msa1133000 | 0.806186 | 9.293542e-50 | -8.615850e-47 |
| Msa0481110 | Msa1133000 | 0.805823 | 1.108013e-49 | -8.615850e-47 |
| Msa1003750 | Msa1133000 | 0.822262 | 2.602657e-53 | -8.615850e-47 |
| Msa1009000 | Msa1133000 | 0.801665 | 8.088827e-49 | -8.615850e-47 |
| Msa1012810 | Msa1133000 | 0.823807 | 1.135030e-53 | -8.615850e-47 |
| Msa1013400 | Msa1133000 | 0.802014 | 6.859235e-49 | -8.615850e-47 |
| Msa1013770 | Msa1133000 | 0.819200 | 1.315939e-52 | -8.615850e-47 |
| Msa1019020 | Msa1133000 | 0.806103 | 9.675278e-50 | -8.615850e-47 |
| Msa1033560 | Msa1133000 | 0.801257 | 9.808225e-49 | -8.615850e-47 |
| Msa1037920 | Msa1133000 | 0.819748 | 9.869925e-53 | -8.615850e-47 |
| Msa1040830 | Msa1133000 | 0.807469 | 4.977517e-50 | -8.615850e-47 |
| Msa1041530 | Msa1133000 | 0.812477 | 4.156390e-51 | -8.615850e-47 |
| Msa1046470 | Msa1133000 | 0.802940 | 4.420172e-49 | -8.615850e-47 |
| Msa1054240 | Msa1133000 | 0.821770 | 3.384439e-53 | -8.615850e-47 |
| Msa1055260 | Msa1133000 | 0.809522 | 1.814868e-50 | -8.615850e-47 |
| Msa1055280 | Msa1133000 | 0.812782 | 3.565572e-51 | -8.615850e-47 |
| Msa1063950 | Msa1133000 | 0.820584 | 6.348604e-53 | -8.615850e-47 |
| Msa1066490 | Msa1133000 | 0.824083 | 9.782384e-54 | -8.615850e-47 |
| Msa1082700 | Msa1133000 | 0.819020 | 1.446256e-52 | -8.615850e-47 |
| Msa1085200 | Msa1133000 | 0.818545 | 1.853538e-52 | -8.615850e-47 |
| Msa1094420 | Msa1133000 | 0.810608 | 1.059437e-50 | -8.615850e-47 |
| Msa1097560 | Msa1133000 | 0.819314 | 1.239791e-52 | -8.615850e-47 |
| Msa1097640 | Msa1133000 | 0.847133 | 1.402081e-59 | -8.615850e-47 |
| Msa1098560 | Msa1133000 | 0.802997 | 4.302008e-49 | -8.615850e-47 |
| Msa1104000 | Msa1133000 | 0.807418 | 5.103260e-50 | -8.615850e-47 |
| Msa0238890 | Msa1133000 | 0.819013 | 1.450971e-52 | -8.615850e-47 |
| Msa0239570 | Msa1133000 | 0.805512 | 1.287915e-49 | -8.615850e-47 |
| Msa0243100 | Msa1133000 | 0.833829 | 4.258227e-56 | -8.615850e-47 |
| Msa0244860 | Msa1133000 | 0.802765 | 4.803078e-49 | -8.615850e-47 |
| Msa0261340 | Msa1133000 | 0.809620 | 1.729487e-50 | -8.615850e-47 |
| Msa0264150 | Msa1133000 | 0.804250 | 2.363803e-49 | -8.615850e-47 |
| Msa0264570 | Msa1133000 | 0.812865 | 3.418661e-51 | -8.615850e-47 |
| Msa0264870 | Msa1133000 | 0.807780 | 4.275396e-50 | -8.615850e-47 |
| Msa0267220 | Msa1133000 | 0.803747 | 3.007211e-49 | -8.615850e-47 |
| Msa0267760 | Msa1133000 | 0.804002 | 2.662829e-49 | -8.615850e-47 |
| Msa0280900 | Msa1133000 | 0.803794 | 2.941186e-49 | -8.615850e-47 |
| Msa0283450 | Msa1133000 | 0.804683 | 1.920033e-49 | -8.615850e-47 |
| Msa0283520 | Msa1133000 | 0.824591 | 7.430768e-54 | -8.615850e-47 |
| Msa0284420 | Msa1133000 | 0.813109 | 3.023399e-51 | -8.615850e-47 |
| Msa0287650 | Msa1133000 | 0.826201 | 3.088480e-54 | -8.615850e-47 |
| Msa0289890 | Msa1133000 | 0.804475 | 2.122362e-49 | -8.615850e-47 |
| Msa0292400 | Msa1133000 | 0.808722 | 2.693941e-50 | -8.615850e-47 |
| Msa0299890 | Msa1133000 | 0.830430 | 2.949594e-55 | -8.615850e-47 |
| Msa0300690 | Msa1133000 | 0.800115 | 1.677054e-48 | -8.615850e-47 |
| Msa0306300 | Msa1133000 | 0.826294 | 2.936276e-54 | -8.615850e-47 |
| Msa0308830 | Msa1133000 | 0.813810 | 2.119486e-51 | -8.615850e-47 |
| Msa0311860 | Msa1133000 | 0.826319 | 2.895292e-54 | -8.615850e-47 |
| Msa0316810 | Msa1133000 | 0.805531 | 1.276313e-49 | -8.615850e-47 |
| Msa0317250 | Msa1133000 | 0.817703 | 2.873976e-52 | -8.615850e-47 |
| Msa0317280 | Msa1133000 | 0.802991 | 4.313640e-49 | -8.615850e-47 |
| Msa0320100 | Msa1133000 | 0.813188 | 2.904199e-51 | -8.615850e-47 |
| Msa0321860 | Msa1133000 | 0.818283 | 2.125540e-52 | -8.615850e-47 |
| Msa0332000 | Msa1133000 | 0.814804 | 1.278653e-51 | -8.615850e-47 |
| Msa0334040 | Msa1133000 | 0.816007 | 6.905070e-52 | -8.615850e-47 |
| Msa0337330 | Msa1133000 | 0.817694 | 2.887638e-52 | -8.615850e-47 |
| Msa0337850 | Msa1133000 | 0.819695 | 1.014702e-52 | -8.615850e-47 |
| Msa0355270 | Msa1133000 | 0.809024 | 2.320679e-50 | -8.615850e-47 |
| Msa0362780 | Msa1133000 | 0.823513 | 1.330479e-53 | -8.615850e-47 |
| Msa0363350 | Msa1133000 | 0.814324 | 1.632805e-51 | -8.615850e-47 |
| Msa1108160 | Msa1133000 | 0.802430 | 5.632039e-49 | -8.615850e-47 |
| Msa1111110 | Msa1133000 | 0.818045 | 2.405196e-52 | -8.615850e-47 |
| Msa1127140 | Msa1133000 | 0.809448 | 1.882957e-50 | -8.615850e-47 |
| Msa1127890 | Msa1133000 | 0.821828 | 3.281068e-53 | -8.615850e-47 |
| Msa1127950 | Msa1133000 | 0.825039 | 5.825372e-54 | -8.615850e-47 |
| Msa1128710 | Msa1133000 | 0.830269 | 3.230077e-55 | -8.615850e-47 |
| Msa1129980 | Msa1133000 | 0.803195 | 3.914366e-49 | -8.615850e-47 |
| Msa1133000 | Msa1133710 | 0.800711 | 1.267837e-48 | -8.615850e-47 |
| Msa1133000 | Msa1134110 | 0.814416 | 1.558268e-51 | -8.615850e-47 |
| Msa1133000 | Msa1139810 | 0.835611 | 1.517230e-56 | -8.615850e-47 |
| Msa1133000 | Msa1140690 | 0.802757 | 4.820530e-49 | -8.615850e-47 |
| Msa1133000 | Msa1147570 | 0.810943 | 8.962089e-51 | -8.615850e-47 |
| Msa1133000 | Msa1147900 | 0.807846 | 4.141083e-50 | -8.615850e-47 |
| Msa1133000 | Msa1151910 | 0.823727 | 1.185217e-53 | -8.615850e-47 |
| Msa1133000 | Msa1165870 | 0.801679 | 8.036832e-49 | -8.615850e-47 |
| Msa1133000 | Msa1166400 | 0.803097 | 4.102122e-49 | -8.615850e-47 |
| Msa1133000 | Msa1172450 | 0.807998 | 3.842561e-50 | -8.615850e-47 |
| Msa1133000 | Msa1172670 | 0.813072 | 3.080493e-51 | -8.615850e-47 |
| Msa1133000 | Msa1179280 | 0.805636 | 1.213204e-49 | -8.615850e-47 |
| Msa1133000 | Msa1179940 | 0.805145 | 1.537661e-49 | -8.615850e-47 |
| Msa1133000 | Msa1203250 | 0.803040 | 4.213181e-49 | -8.615850e-47 |
| Msa1133000 | Msa1209460 | 0.823579 | 1.283484e-53 | -8.615850e-47 |
| Msa1133000 | Msa1214890 | 0.803427 | 3.504822e-49 | -8.615850e-47 |
| Msa1133000 | Msa1218600 | 0.804595 | 2.003746e-49 | -8.615850e-47 |
| Msa1133000 | Msa1221560 | 0.805791 | 1.125432e-49 | -8.615850e-47 |
| Msa1133000 | Msa1222970 | 0.817011 | 4.114767e-52 | -8.615850e-47 |
| Msa1133000 | Msa1222990 | 0.800735 | 1.253669e-48 | -8.615850e-47 |
| Msa1133000 | Msa1224840 | 0.800185 | 1.622378e-48 | -8.615850e-47 |
| Msa1133000 | Msa1236100 | 0.815946 | 7.123486e-52 | -8.615850e-47 |
| Msa1133000 | Msa1238930 | 0.810891 | 9.199792e-51 | -8.615850e-47 |
| Msa1133000 | Msa1240310 | 0.808088 | 3.677047e-50 | -8.615850e-47 |
| Msa1133000 | Msa1242240 | 0.802545 | 5.333444e-49 | -8.615850e-47 |
| Msa1133000 | Msa1261010 | 0.806243 | 9.043505e-50 | -8.615850e-47 |
| Msa1133000 | Msa1264020 | 0.832593 | 8.653874e-56 | -8.615850e-47 |
| Msa1133000 | Msa1269580 | -0.817651 | 2.952325e-52 | -8.615850e-47 |
| Msa1133000 | Msa1271300 | 0.819437 | 1.161781e-52 | -8.615850e-47 |
| Msa1133000 | Msa1272900 | 0.800134 | 1.661780e-48 | -8.615850e-47 |
| Msa1133000 | Msa1280420 | 0.821433 | 4.047672e-53 | -8.615850e-47 |
| Msa1133000 | Msa1283860 | 0.803006 | 4.282474e-49 | -8.615850e-47 |
| Msa1133000 | Msa1292830 | 0.807734 | 4.373383e-50 | -8.615850e-47 |
| Msa1133000 | Msa1300490 | 0.803356 | 3.624811e-49 | -8.615850e-47 |
| Msa1133000 | Msa1303250 | 0.817433 | 3.305680e-52 | -8.615850e-47 |
| Msa1133000 | Msa1308380 | 0.835943 | 1.250238e-56 | -8.615850e-47 |
| Msa1133000 | Msa1313150 | 0.802178 | 6.347396e-49 | -8.615850e-47 |
| Msa1133000 | Msa1319650 | 0.813805 | 2.125258e-51 | -8.615850e-47 |
| Msa1133000 | Msa1320740 | 0.831050 | 2.079038e-55 | -8.615850e-47 |
| Msa1133000 | Msa1351760 | 0.824892 | 6.309410e-54 | -8.615850e-47 |
| Msa1133000 | Msa1364470 | -0.819161 | 1.343188e-52 | -8.615850e-47 |
| Msa1133000 | Msa1366600 | 0.803170 | 3.961246e-49 | -8.615850e-47 |
| Msa1133000 | Msa1367080 | 0.804552 | 2.045251e-49 | -8.615850e-47 |
| Msa1133000 | Msa1371430 | 0.805749 | 1.148857e-49 | -8.615850e-47 |
| Msa1133000 | Msa1373330 | 0.815106 | 1.095457e-51 | -8.615850e-47 |
| Msa1133000 | Msa1374040 | 0.837407 | 5.295036e-57 | -8.615850e-47 |
| Msa1133000 | Msa1374550 | 0.823963 | 1.043815e-53 | -8.615850e-47 |
| Msa1133000 | Msa1382540 | 0.808800 | 2.592254e-50 | -8.615850e-47 |
| Msa1133000 | Msa1409870 | 0.803479 | 3.418445e-49 | -8.615850e-47 |
| Msa1133000 | Msa1415640 | 0.817180 | 3.770064e-52 | -8.615850e-47 |
| Msa1133000 | Msa1417870 | 0.804603 | 1.995807e-49 | -8.615850e-47 |
| Msa1133000 | Msa1420060 | 0.815243 | 1.021742e-51 | -8.615850e-47 |
| Msa1133000 | Msa1427760 | 0.813028 | 3.148498e-51 | -8.615850e-47 |
| Msa1133000 | Msa1429360 | -0.813868 | 2.058427e-51 | -8.615850e-47 |
| Msa1133000 | Msa1430280 | 0.806868 | 6.673652e-50 | -8.615850e-47 |
| Msa1133000 | Msa1452120 | 0.809709 | 1.654919e-50 | -8.615850e-47 |
| Msa1133000 | Msa1459380 | 0.814981 | 1.167687e-51 | -8.615850e-47 |
| Msa1133000 | Msa1460020 | 0.802619 | 5.147105e-49 | -8.615850e-47 |
| Msa0483860 | Msa1133000 | 0.814924 | 1.202747e-51 | -8.615850e-47 |
| Msa0484780 | Msa1133000 | 0.803838 | 2.880248e-49 | -8.615850e-47 |
| Msa0485990 | Msa1133000 | 0.813180 | 2.915759e-51 | -8.615850e-47 |
| Msa0500360 | Msa1133000 | 0.812201 | 4.776234e-51 | -8.615850e-47 |
| Msa0503580 | Msa1133000 | 0.843123 | 1.700463e-58 | -8.615850e-47 |
| Msa0507680 | Msa1133000 | 0.829470 | 5.056321e-55 | -8.615850e-47 |
| Msa0509610 | Msa1133000 | 0.806445 | 8.196565e-50 | -8.615850e-47 |
| Msa0516320 | Msa1133000 | 0.807816 | 4.202059e-50 | -8.615850e-47 |
| Msa0517330 | Msa1133000 | 0.804726 | 1.881265e-49 | -8.615850e-47 |
| Msa0521500 | Msa1133000 | 0.812725 | 3.669094e-51 | -8.615850e-47 |
| Msa0521540 | Msa1133000 | 0.820666 | 6.079714e-53 | -8.615850e-47 |
| Msa0526710 | Msa1133000 | 0.803323 | 3.682337e-49 | -8.615850e-47 |
| Msa0534590 | Msa1133000 | 0.806591 | 7.638403e-50 | -8.615850e-47 |
| Msa0541860 | Msa1133000 | 0.800089 | 1.697366e-48 | -8.615850e-47 |
| Msa0546680 | Msa1133000 | 0.803678 | 3.108717e-49 | -8.615850e-47 |
| Msa0547140 | Msa1133000 | 0.805766 | 1.139003e-49 | -8.615850e-47 |
| Msa0547720 | Msa1133000 | 0.808198 | 3.483759e-50 | -8.615850e-47 |
| Msa0548660 | Msa1133000 | 0.806815 | 6.848030e-50 | -8.615850e-47 |
| Msa0571140 | Msa1133000 | 0.920456 | 1.250329e-87 | -8.615850e-47 |
| Msa0574890 | Msa1133000 | 0.851252 | 1.001725e-60 | -8.615850e-47 |
| Msa0581760 | Msa1133000 | 0.810751 | 9.864972e-51 | -8.615850e-47 |
| Msa0590800 | Msa1133000 | 0.813625 | 2.328448e-51 | -8.615850e-47 |
| Msa0601850 | Msa1133000 | 0.809122 | 2.211627e-50 | -8.615850e-47 |
| Msa0843220 | Msa1133000 | 0.805208 | 1.491764e-49 | -8.615850e-47 |
| Msa0844240 | Msa1133000 | 0.809813 | 1.571749e-50 | -8.615850e-47 |
| Msa0850960 | Msa1133000 | 0.819716 | 1.003621e-52 | -8.615850e-47 |
| Msa0862100 | Msa1133000 | 0.825617 | 4.251933e-54 | -8.615850e-47 |
| Msa0863930 | Msa1133000 | 0.812131 | 4.945743e-51 | -8.615850e-47 |
| Msa0867890 | Msa1133000 | 0.809159 | 2.171302e-50 | -8.615850e-47 |
| Msa0872310 | Msa1133000 | 0.832811 | 7.640297e-56 | -8.615850e-47 |
| Msa0876200 | Msa1133000 | 0.809020 | 2.326250e-50 | -8.615850e-47 |
| Msa0878290 | Msa1133000 | 0.802646 | 5.082645e-49 | -8.615850e-47 |
| Msa0880140 | Msa1133000 | 0.853687 | 2.026146e-61 | -8.615850e-47 |
| Msa0880440 | Msa1133000 | 0.977560 | 5.013330e-144 | -8.615850e-47 |
| Msa0885060 | Msa1133000 | 0.828629 | 8.085852e-55 | -8.615850e-47 |
| Msa0895790 | Msa1133000 | 0.801833 | 7.472871e-49 | -8.615850e-47 |
| Msa0896750 | Msa1133000 | 0.802867 | 4.576532e-49 | -8.615850e-47 |
| Msa0896970 | Msa1133000 | 0.810154 | 1.327267e-50 | -8.615850e-47 |
| Msa0905550 | Msa1133000 | 0.808832 | 2.551398e-50 | -8.615850e-47 |
| Msa0908050 | Msa1133000 | 0.818826 | 1.600814e-52 | -8.615850e-47 |
| Msa0911990 | Msa1133000 | 0.818450 | 1.947840e-52 | -8.615850e-47 |
| Msa0930780 | Msa1133000 | 0.844435 | 7.574150e-59 | -8.615850e-47 |
| Msa0931720 | Msa1133000 | 0.810134 | 1.340522e-50 | -8.615850e-47 |
| Msa0936270 | Msa1133000 | 0.803112 | 4.072271e-49 | -8.615850e-47 |
| Msa0936410 | Msa1133000 | 0.816138 | 6.453734e-52 | -8.615850e-47 |
| Msa0961690 | Msa1133000 | 0.810140 | 1.336231e-50 | -8.615850e-47 |
| Msa0968590 | Msa1133000 | 0.800485 | 1.409710e-48 | -8.615850e-47 |
| Msa0973250 | Msa1133000 | 0.811754 | 5.976007e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1133000 | MtrunA17_Chr8g0386271 | 98.974 | 390 | 4 | 0 | 1 | 390 | 1 | 390 | 0.0 | 807 |
| Msa1133000 | MtrunA17_Chr3g0132091 | 59.631 | 379 | 99 | 20 | 33 | 390 | 6 | 351 | 2.43e-126 | 368 |
| Msa1133000 | MtrunA17_Chr7g0224821 | 44.068 | 236 | 107 | 8 | 1 | 234 | 1 | 213 | 8.15e-50 | 171 |
| Msa1133000 | MtrunA17_Chr2g0308321 | 59.231 | 130 | 48 | 2 | 45 | 174 | 122 | 246 | 1.37e-38 | 145 |
| Msa1133000 | MtrunA17_Chr8g0366211 | 87.912 | 91 | 11 | 0 | 49 | 139 | 39 | 129 | 2.11e-38 | 134 |
| Msa1133000 | MtrunA17_Chr4g0061651 | 54.887 | 133 | 48 | 4 | 45 | 174 | 75 | 198 | 3.29e-37 | 140 |
| Msa1133000 | MtrunA17_Chr5g0420051 | 47.712 | 153 | 75 | 3 | 45 | 196 | 131 | 279 | 2.31e-35 | 134 |
| Msa1133000 | MtrunA17_Chr1g0162871 | 67.901 | 81 | 26 | 0 | 99 | 179 | 104 | 184 | 6.94e-33 | 130 |
| Msa1133000 | MtrunA17_Chr2g0302791 | 52.252 | 111 | 52 | 1 | 66 | 176 | 107 | 216 | 1.17e-32 | 130 |
| Msa1133000 | MtrunA17_Chr3g0122411 | 56.311 | 103 | 42 | 2 | 98 | 197 | 164 | 266 | 1.23e-32 | 127 |
| Msa1133000 | MtrunA17_Chr7g0231911 | 56.842 | 95 | 41 | 0 | 89 | 183 | 139 | 233 | 1.63e-32 | 124 |
| Msa1133000 | MtrunA17_Chr7g0270541 | 48.837 | 129 | 63 | 2 | 58 | 183 | 101 | 229 | 2.53e-32 | 129 |
| Msa1133000 | MtrunA17_Chr1g0194121 | 58.163 | 98 | 41 | 0 | 85 | 182 | 133 | 230 | 3.16e-32 | 129 |
| Msa1133000 | MtrunA17_Chr8g0334671 | 54.867 | 113 | 47 | 1 | 66 | 174 | 150 | 262 | 5.14e-32 | 123 |
| Msa1133000 | MtrunA17_Chr7g0258471 | 34.138 | 290 | 136 | 9 | 94 | 372 | 137 | 382 | 1.95e-31 | 123 |
| Msa1133000 | MtrunA17_Chr8g0360361 | 62.353 | 85 | 32 | 0 | 99 | 183 | 65 | 149 | 3.23e-30 | 114 |
| Msa1133000 | MtrunA17_Chr4g0046991 | 67.568 | 74 | 24 | 0 | 99 | 172 | 73 | 146 | 2.08e-29 | 111 |
| Msa1133000 | MtrunA17_Chr2g0282521 | 61.905 | 84 | 32 | 0 | 93 | 176 | 58 | 141 | 6.04e-28 | 107 |
| Msa1133000 | MtrunA17_Chr8g0377421 | 45.614 | 114 | 59 | 1 | 99 | 209 | 132 | 245 | 3.60e-24 | 101 |
| Msa1133000 | MtrunA17_Chr2g0286661 | 52.703 | 74 | 35 | 0 | 99 | 172 | 103 | 176 | 8.43e-22 | 97.4 |
| Msa1133000 | MtrunA17_Chr8g0377401 | 57.534 | 73 | 31 | 0 | 99 | 171 | 162 | 234 | 2.84e-21 | 92.0 |
| Msa1133000 | MtrunA17_Chr2g0317041 | 61.702 | 47 | 18 | 0 | 99 | 145 | 99 | 145 | 9.62e-15 | 71.2 |
| Msa1133000 | MtrunA17_Chr8g0377431 | 44.286 | 70 | 39 | 0 | 85 | 154 | 137 | 206 | 8.11e-13 | 67.0 |
| Msa1133000 | MtrunA17_Chr1g0175031 | 57.447 | 47 | 20 | 0 | 99 | 145 | 74 | 120 | 9.01e-13 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1133000 | AT5G50570.1 | 48.084 | 287 | 123 | 9 | 1 | 268 | 1 | 280 | 5.60e-71 | 227 |
| Msa1133000 | AT5G50570.2 | 48.084 | 287 | 123 | 9 | 1 | 268 | 1 | 280 | 5.60e-71 | 227 |
| Msa1133000 | AT5G50670.1 | 48.084 | 287 | 123 | 9 | 1 | 268 | 1 | 280 | 5.60e-71 | 227 |
| Msa1133000 | AT5G50670.2 | 48.084 | 287 | 123 | 9 | 1 | 268 | 1 | 280 | 5.60e-71 | 227 |
| Msa1133000 | AT1G76580.2 | 65.591 | 93 | 32 | 0 | 99 | 191 | 114 | 206 | 5.58e-36 | 139 |
| Msa1133000 | AT1G76580.3 | 65.591 | 93 | 32 | 0 | 99 | 191 | 114 | 206 | 6.51e-36 | 139 |
| Msa1133000 | AT1G76580.1 | 65.591 | 93 | 32 | 0 | 99 | 191 | 114 | 206 | 1.19e-35 | 139 |
| Msa1133000 | AT3G60030.1 | 58.716 | 109 | 41 | 1 | 94 | 198 | 122 | 230 | 5.73e-35 | 137 |
| Msa1133000 | AT2G47070.1 | 72.152 | 79 | 22 | 0 | 99 | 177 | 106 | 184 | 1.05e-34 | 136 |
| Msa1133000 | AT1G20980.1 | 43.333 | 180 | 80 | 6 | 2 | 179 | 42 | 201 | 1.39e-33 | 133 |
| Msa1133000 | AT1G69170.1 | 64.444 | 90 | 32 | 0 | 84 | 173 | 109 | 198 | 3.40e-33 | 128 |
| Msa1133000 | AT1G27370.6 | 58.889 | 90 | 37 | 0 | 85 | 174 | 162 | 251 | 7.43e-33 | 126 |
| Msa1133000 | AT1G27370.1 | 58.889 | 90 | 37 | 0 | 85 | 174 | 162 | 251 | 1.17e-32 | 127 |
| Msa1133000 | AT1G27370.5 | 58.889 | 90 | 37 | 0 | 85 | 174 | 162 | 251 | 1.17e-32 | 127 |
| Msa1133000 | AT1G27370.3 | 58.889 | 90 | 37 | 0 | 85 | 174 | 162 | 251 | 1.17e-32 | 127 |
| Msa1133000 | AT1G27370.2 | 58.889 | 90 | 37 | 0 | 85 | 174 | 162 | 251 | 1.17e-32 | 127 |
| Msa1133000 | AT1G27370.4 | 58.889 | 90 | 37 | 0 | 85 | 174 | 162 | 251 | 1.17e-32 | 127 |
| Msa1133000 | AT1G27370.7 | 58.889 | 90 | 37 | 0 | 85 | 174 | 162 | 251 | 1.17e-32 | 127 |
| Msa1133000 | AT1G53160.3 | 60.227 | 88 | 35 | 0 | 89 | 176 | 44 | 131 | 6.62e-31 | 116 |
| Msa1133000 | AT1G53160.2 | 60.227 | 88 | 35 | 0 | 89 | 176 | 44 | 131 | 8.24e-31 | 116 |
| Msa1133000 | AT1G53160.1 | 60.227 | 88 | 35 | 0 | 89 | 176 | 44 | 131 | 8.24e-31 | 116 |
| Msa1133000 | AT2G42200.1 | 61.905 | 84 | 32 | 0 | 96 | 179 | 71 | 154 | 1.32e-30 | 120 |
| Msa1133000 | AT3G57920.1 | 52.885 | 104 | 49 | 0 | 72 | 175 | 32 | 135 | 1.48e-30 | 120 |
| Msa1133000 | AT1G27360.2 | 64.557 | 79 | 28 | 0 | 96 | 174 | 172 | 250 | 2.27e-30 | 120 |
| Msa1133000 | AT1G27360.1 | 64.557 | 79 | 28 | 0 | 96 | 174 | 172 | 250 | 2.27e-30 | 120 |
| Msa1133000 | AT1G27360.3 | 64.557 | 79 | 28 | 0 | 96 | 174 | 172 | 250 | 2.27e-30 | 120 |
| Msa1133000 | AT1G27360.4 | 64.557 | 79 | 28 | 0 | 96 | 174 | 172 | 250 | 2.27e-30 | 120 |
| Msa1133000 | AT1G02065.1 | 63.095 | 84 | 31 | 0 | 89 | 172 | 178 | 261 | 5.39e-30 | 118 |
| Msa1133000 | AT2G33810.1 | 66.216 | 74 | 25 | 0 | 99 | 172 | 54 | 127 | 1.37e-29 | 111 |
| Msa1133000 | AT5G43270.3 | 59.302 | 86 | 35 | 0 | 90 | 175 | 160 | 245 | 1.56e-29 | 118 |
| Msa1133000 | AT5G43270.1 | 59.302 | 86 | 35 | 0 | 90 | 175 | 160 | 245 | 1.56e-29 | 118 |
| Msa1133000 | AT5G43270.2 | 59.302 | 86 | 35 | 0 | 90 | 175 | 160 | 245 | 1.56e-29 | 118 |
| Msa1133000 | AT3G15270.1 | 62.162 | 74 | 28 | 0 | 99 | 172 | 63 | 136 | 4.30e-28 | 109 |
| Msa1133000 | AT5G18830.3 | 44.944 | 89 | 48 | 1 | 86 | 173 | 125 | 213 | 1.33e-21 | 97.4 |
| Msa1133000 | AT5G18830.1 | 44.944 | 89 | 48 | 1 | 86 | 173 | 125 | 213 | 1.36e-21 | 97.4 |
| Msa1133000 | AT5G18830.2 | 44.944 | 89 | 48 | 1 | 86 | 173 | 125 | 213 | 1.39e-21 | 97.4 |
| Msa1133000 | AT2G47070.2 | 72.727 | 55 | 15 | 0 | 123 | 177 | 1 | 55 | 4.93e-21 | 95.9 |
| Msa1133000 | AT1G02065.2 | 41.837 | 98 | 49 | 3 | 57 | 146 | 138 | 235 | 9.94e-16 | 76.6 |
Find 121 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGTTTCTATGTTGTTTA+AGG | 0.109263 | 7_3:-85926683 | None:intergenic |
| TTTAAACTAACCTTGGTAAT+TGG | 0.163177 | 7_3:-85927808 | None:intergenic |
| GGGGTCTGTGGACTCAGTTT+TGG | 0.232288 | 7_3:+85929650 | Msa1133000:CDS |
| ATCTTCCTCCTCTTCTTATA+AGG | 0.234994 | 7_3:+85929809 | Msa1133000:three_prime_UTR |
| ACAATTTCATCTTCATAATA+AGG | 0.257583 | 7_3:+85925864 | Msa1133000:five_prime_UTR |
| ACACATGATCATCCTGAAAA+TGG | 0.265481 | 7_3:+85929555 | Msa1133000:CDS |
| AAGATGAATGAAACTGAAAA+AGG | 0.280302 | 7_3:-85925765 | None:intergenic |
| GATCATCAGCAAACAAATTA+AGG | 0.283399 | 7_3:-85929838 | None:intergenic |
| TCTTCATCATCTTCAACTTC+AGG | 0.292841 | 7_3:+85926847 | Msa1133000:CDS |
| TTTCAATGGGATTAGATTAG+AGG | 0.294187 | 7_3:+85929774 | Msa1133000:exon |
| AGAAGATAATTGTCATAATA+AGG | 0.299682 | 7_3:-85925631 | None:intergenic |
| GGTAAATCCACCAACATCTT+TGG | 0.300549 | 7_3:-85926815 | None:intergenic |
| TCCCATTGAAAAGGAAATAA+TGG | 0.301322 | 7_3:-85929762 | None:intergenic |
| AAGCTACTACTTCGAGTAAT+AGG | 0.322521 | 7_3:-85927780 | None:intergenic |
| AATGAAGTTCACATACCTTA+TGG | 0.332097 | 7_3:-85926975 | None:intergenic |
| TTCATGGGATTTAACTGAAA+TGG | 0.342436 | 7_3:+85926651 | Msa1133000:CDS |
| AAGATGTTGTTCCAAGAAAA+AGG | 0.342659 | 7_3:-85929323 | None:intergenic |
| AGATGATGAAGATGTCATTT+TGG | 0.350943 | 7_3:-85926836 | None:intergenic |
| GGAAATTCTAGCACTGAATC+AGG | 0.359546 | 7_3:+85926781 | Msa1133000:CDS |
| GATGGTTCAATTAGGAGGTT+TGG | 0.365880 | 7_3:+85926706 | Msa1133000:CDS |
| AGTTTGCATGACCATAGCTT+GGG | 0.365920 | 7_3:+85929630 | Msa1133000:CDS |
| CTTGGGTTGGAGGAGATGTT+AGG | 0.371034 | 7_3:+85929247 | Msa1133000:CDS |
| AAACAATGGATGGTTCAATT+AGG | 0.371347 | 7_3:+85926698 | Msa1133000:CDS |
| TTGAGAAGCATCTTGTGTTA+TGG | 0.372893 | 7_3:+85926606 | Msa1133000:intron |
| GGGTTCATCATAGCAGTAGA+AGG | 0.377531 | 7_3:-85929222 | None:intergenic |
| CTGCTATGATGAACCCTACT+TGG | 0.380036 | 7_3:+85929229 | Msa1133000:CDS |
| CTACTTCGAGTAATAGGTTC+TGG | 0.389750 | 7_3:-85927774 | None:intergenic |
| TTTCCCTTCTTTGTAGCTGC+TGG | 0.392060 | 7_3:-85929349 | None:intergenic |
| TTGTTCCTCAATTTATAACT+TGG | 0.392942 | 7_3:+85929695 | Msa1133000:CDS |
| CATTATTATTCCCCTGAGAA+TGG | 0.393387 | 7_3:-85929731 | None:intergenic |
| TTCTAGTGAATCCCATTCTC+AGG | 0.405544 | 7_3:+85929719 | Msa1133000:CDS |
| TAAATTATTATTATATTACT+TGG | 0.408494 | 7_3:+85925718 | Msa1133000:five_prime_UTR |
| CAGTGGCTGCTGCTGTTGGC+TGG | 0.413457 | 7_3:-85929395 | None:intergenic |
| GTAATTTGAAAGCACCTTCA+TGG | 0.414407 | 7_3:+85926635 | Msa1133000:CDS |
| TTCACAGTGGCTGCTGCTGT+TGG | 0.415317 | 7_3:-85929399 | None:intergenic |
| AAAAGAACCTGCTACATTGC+TGG | 0.422583 | 7_3:-85927044 | None:intergenic |
| TGATCATGTGTTTGTGGTAC+TGG | 0.432050 | 7_3:-85929543 | None:intergenic |
| GTTGGTGTTGATTGTGGCTA+TGG | 0.432534 | 7_3:-85929272 | None:intergenic |
| TTTGGAGATTACAGAACAAA+AGG | 0.434418 | 7_3:+85926724 | Msa1133000:CDS |
| ATCGTTTAAGAAAATCATAT+TGG | 0.435628 | 7_3:+85929931 | Msa1133000:three_prime_UTR |
| CACTTTGTCTTAATGCATGA+AGG | 0.437853 | 7_3:+85929892 | Msa1133000:three_prime_UTR |
| CAACCAGATGGTGCATTTGT+TGG | 0.454409 | 7_3:-85929290 | None:intergenic |
| ATTATTATTCCCCTGAGAAT+GGG | 0.465602 | 7_3:-85929730 | None:intergenic |
| GAGTTTGCATGACCATAGCT+TGG | 0.466352 | 7_3:+85929629 | Msa1133000:CDS |
| CTAATCTAATCCCATTGAAA+AGG | 0.467134 | 7_3:-85929771 | None:intergenic |
| CCATGAGTCGCACGTTTAGC+AGG | 0.467652 | 7_3:+85929445 | Msa1133000:CDS |
| CTTCATCATCTTCAACTTCA+GGG | 0.469448 | 7_3:+85926848 | Msa1133000:CDS |
| AACTTGAGAATGGTAGCAAT+TGG | 0.470856 | 7_3:-85929188 | None:intergenic |
| AATTGTGACCTGTGCAGTCT+TGG | 0.471856 | 7_3:-85926998 | None:intergenic |
| CGAGTAATAGGTTCTGGTTG+TGG | 0.475165 | 7_3:-85927768 | None:intergenic |
| AAGACTGCACAGGTCACAAT+TGG | 0.475432 | 7_3:+85927000 | Msa1133000:CDS |
| GTCTTAATGCATGAAGGCAA+TGG | 0.485388 | 7_3:+85929898 | Msa1133000:three_prime_UTR |
| TGTTCCTCAATTTATAACTT+GGG | 0.485493 | 7_3:+85929696 | Msa1133000:CDS |
| ATGAACCCTACTTGGGTTGG+AGG | 0.486277 | 7_3:+85929237 | Msa1133000:CDS |
| ATGAAGGAAAGAGGAGCTGT+AGG | 0.487258 | 7_3:+85927709 | Msa1133000:CDS |
| GTAACTGTAGAGACTATCAT+AGG | 0.493095 | 7_3:+85926950 | Msa1133000:CDS |
| TGACCATAGCTTGGGGTCTG+TGG | 0.493672 | 7_3:+85929638 | Msa1133000:CDS |
| GTCATGCAAACTCAAGCCTA+AGG | 0.500554 | 7_3:-85929619 | None:intergenic |
| TCAGATAGTTTCATGTCTTG+TGG | 0.502100 | 7_3:+85926906 | Msa1133000:CDS |
| CCTGCTAAACGTGCGACTCA+TGG | 0.502871 | 7_3:-85929445 | None:intergenic |
| CAATGGATGGTTCAATTAGG+AGG | 0.503930 | 7_3:+85926701 | Msa1133000:CDS |
| TCAACCAGCAGCTACAAAGA+AGG | 0.503966 | 7_3:+85929345 | Msa1133000:CDS |
| ACTTGAGAATGGTAGCAATT+GGG | 0.507340 | 7_3:-85929187 | None:intergenic |
| GTGCGACTCATGGATGAAGC+TGG | 0.513016 | 7_3:-85929435 | None:intergenic |
| TAATTTGAAAGCACCTTCAT+GGG | 0.516062 | 7_3:+85926636 | Msa1133000:CDS |
| ACACCAACAAATGCACCATC+TGG | 0.516097 | 7_3:+85929287 | Msa1133000:CDS |
| ACATCTCCTCCAACCCAAGT+AGG | 0.516216 | 7_3:-85929243 | None:intergenic |
| TGAAAGTTGAAGCTAAAACT+TGG | 0.518290 | 7_3:-85925806 | None:intergenic |
| CTGTATATGTAGCTTGAGAA+AGG | 0.518416 | 7_3:-85925660 | None:intergenic |
| GAGCTAGAGCTATCAACAAT+GGG | 0.520984 | 7_3:+85926881 | Msa1133000:CDS |
| AGACTATCATAGGCGCCATA+AGG | 0.522041 | 7_3:+85926960 | Msa1133000:CDS |
| TCAGGATGATCATGTGTTTG+TGG | 0.524418 | 7_3:-85929549 | None:intergenic |
| GCATTTGTTGGTGTTGATTG+TGG | 0.524493 | 7_3:-85929278 | None:intergenic |
| GATGAAATTGTGGATTTGAA+AGG | 0.525997 | 7_3:-85925852 | None:intergenic |
| AGCTGTAGGAAACGCTTAGA+TGG | 0.526456 | 7_3:+85927723 | Msa1133000:CDS |
| ACTGCACAGGTCACAATTGG+TGG | 0.532124 | 7_3:+85927003 | Msa1133000:CDS |
| AGGAATTTGATGAAGGAAAG+AGG | 0.537908 | 7_3:+85927700 | Msa1133000:CDS |
| AGAACCCAAGTTATAAATTG+AGG | 0.540593 | 7_3:-85929700 | None:intergenic |
| GGTTCTGCCAGCAATGTAGC+AGG | 0.542918 | 7_3:+85927037 | Msa1133000:CDS |
| ATAATTGTCATAATAAGGAC+AGG | 0.547826 | 7_3:-85925626 | None:intergenic |
| ATAGTTTCATGTCTTGTGGA+TGG | 0.552133 | 7_3:+85926910 | Msa1133000:CDS |
| CATCTCCTCCAACCCAAGTA+GGG | 0.552239 | 7_3:-85929242 | None:intergenic |
| CTCATGGATGAAGCTGGAAG+AGG | 0.554579 | 7_3:-85929429 | None:intergenic |
| GATTTAACTGAAATGGATCA+AGG | 0.556449 | 7_3:+85926658 | Msa1133000:CDS |
| TATACATGTGAACTTGAGAA+TGG | 0.557360 | 7_3:-85929198 | None:intergenic |
| GCTCTAGAGGAATTTGATGA+AGG | 0.560175 | 7_3:+85927693 | Msa1133000:CDS |
| TCATAATAAGGACAGGCTGT+TGG | 0.561129 | 7_3:-85925619 | None:intergenic |
| ACAAAGTCCAAAGATGTTGG+TGG | 0.562124 | 7_3:+85926808 | Msa1133000:CDS |
| CATCAAATTCCTCTAGAGCA+TGG | 0.562487 | 7_3:-85927689 | None:intergenic |
| CTTAAACAACATAGAAACAA+TGG | 0.562677 | 7_3:+85926684 | Msa1133000:CDS |
| TTATTATGAAGATGAAATTG+TGG | 0.562818 | 7_3:-85925862 | None:intergenic |
| ATGATGAACCCTACTTGGGT+TGG | 0.564738 | 7_3:+85929234 | Msa1133000:CDS |
| ATTTCAGTTAAATCCCATGA+AGG | 0.568024 | 7_3:-85926649 | None:intergenic |
| CTTACAAAGTCCAAAGATGT+TGG | 0.572874 | 7_3:+85926805 | Msa1133000:CDS |
| CAACCAGCAGCTACAAAGAA+GGG | 0.573578 | 7_3:+85929346 | Msa1133000:CDS |
| GACAACCTTATAAGAAGAGG+AGG | 0.573731 | 7_3:-85929814 | None:intergenic |
| TGCTATGATGAACCCTACTT+GGG | 0.579124 | 7_3:+85929230 | Msa1133000:CDS |
| GGTCTTGTTTATCAACCAGA+TGG | 0.579275 | 7_3:-85929302 | None:intergenic |
| AGAGCTAGAGCTATCAACAA+TGG | 0.587150 | 7_3:+85926880 | Msa1133000:CDS |
| GAAATTCTAGCACTGAATCA+GGG | 0.589286 | 7_3:+85926782 | Msa1133000:CDS |
| AGTCCACAGACCCCAAGCTA+TGG | 0.589981 | 7_3:-85929641 | None:intergenic |
| GTTTGCATGACCATAGCTTG+GGG | 0.604245 | 7_3:+85929631 | Msa1133000:CDS |
| GATTTGAAGCTTGGCCATGT+TGG | 0.605175 | 7_3:+85926760 | Msa1133000:CDS |
| GGTGACAACCTTATAAGAAG+AGG | 0.605811 | 7_3:-85929817 | None:intergenic |
| GTGTAGGTTCCATGCTCTAG+AGG | 0.610810 | 7_3:+85927680 | Msa1133000:intron |
| TCTAGTGAATCCCATTCTCA+GGG | 0.611691 | 7_3:+85929720 | Msa1133000:CDS |
| GATTTGAAAGGACAATTGTG+TGG | 0.618328 | 7_3:-85925840 | None:intergenic |
| GCTTAGATGGTCACAACCGA+CGG | 0.619901 | 7_3:+85927736 | Msa1133000:CDS |
| TCATGCAAACTCAAGCCTAA+GGG | 0.620270 | 7_3:-85929618 | None:intergenic |
| GTTGAAGCTAAAACTTGGAG+AGG | 0.621827 | 7_3:-85925801 | None:intergenic |
| GGTTCATCATAGCAGTAGAA+GGG | 0.627296 | 7_3:-85929221 | None:intergenic |
| TGAAAATGGATTGAATCAGA+TGG | 0.631963 | 7_3:+85929569 | Msa1133000:CDS |
| CAGTGCTAGAATTTCCAACA+TGG | 0.635549 | 7_3:-85926774 | None:intergenic |
| AACAACATAGAAACAATGGA+TGG | 0.636248 | 7_3:+85926688 | Msa1133000:CDS |
| ACTTCATTCCAAGACTGCAC+AGG | 0.639272 | 7_3:+85926990 | Msa1133000:CDS |
| CAATTGGTGGACATAAGCAA+AGG | 0.658162 | 7_3:+85927016 | Msa1133000:CDS |
| AAGCATCTTGTGTTATGGAG+TGG | 0.679671 | 7_3:+85926611 | Msa1133000:intron |
| TTGGGTTCAAATGATCAGAG+TGG | 0.682356 | 7_3:+85929669 | Msa1133000:CDS |
| AAGAGGTTGGTTGTTCACAG+TGG | 0.701313 | 7_3:-85929412 | None:intergenic |
| TGGATGAAGCTGGAAGAGGT+TGG | 0.704527 | 7_3:-85929425 | None:intergenic |
| CTAGTGAATCCCATTCTCAG+GGG | 0.746099 | 7_3:+85929721 | Msa1133000:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATAAAAAAAAAAAAAAAA+AGG | - | chr7_3:85926149-85926168 | None:intergenic | 0.0% |
| !! | TAAATTTCAAGATATAAAAT+AGG | - | chr7_3:85926387-85926406 | None:intergenic | 10.0% |
| !!! | TCTTTTTTACTAAAAATAGA+GGG | - | chr7_3:85925693-85925712 | None:intergenic | 15.0% |
| !!! | TTCTTTTTTACTAAAAATAG+AGG | - | chr7_3:85925694-85925713 | None:intergenic | 15.0% |
| !! | TGTAAAACAAAATGTAAAAA+AGG | - | chr7_3:85926087-85926106 | None:intergenic | 15.0% |
| !!! | TTTAAAGTGATAATAAATAG+AGG | - | chr7_3:85926423-85926442 | None:intergenic | 15.0% |
| !! | AAATAAAGAGAAAATTATGA+AGG | - | chr7_3:85926572-85926591 | None:intergenic | 15.0% |
| !! | TAGATAAATATTTAGATCAA+AGG | - | chr7_3:85927542-85927561 | None:intergenic | 15.0% |
| !!! | ATCTAACATTTGAAATTTAA+GGG | - | chr7_3:85928703-85928722 | None:intergenic | 15.0% |
| !!! | TATCTAACATTTGAAATTTA+AGG | - | chr7_3:85928704-85928723 | None:intergenic | 15.0% |
| !! | AAATAACCATTTATAACTTA+AGG | + | chr7_3:85928895-85928914 | Msa1133000:intron | 15.0% |
| !! | AATAACCATTTATAACTTAA+GGG | + | chr7_3:85928896-85928915 | Msa1133000:intron | 15.0% |
| !!! | CAACAATATATTTTTTTATC+AGG | + | chr7_3:85929162-85929181 | Msa1133000:intron | 15.0% |
| !! | AGAAGATAATTGTCATAATA+AGG | - | chr7_3:85925634-85925653 | None:intergenic | 20.0% |
| !! | TTATTATGAAGATGAAATTG+TGG | - | chr7_3:85925865-85925884 | None:intergenic | 20.0% |
| !! | ACAATTTCATCTTCATAATA+AGG | + | chr7_3:85925864-85925883 | Msa1133000:five_prime_UTR | 20.0% |
| !!! | GATTTTATGTTATATAGAGA+AGG | - | chr7_3:85925915-85925934 | None:intergenic | 20.0% |
| !! | ACATAATTTAGAAGTTTACT+AGG | - | chr7_3:85927192-85927211 | None:intergenic | 20.0% |
| !!! | ATTAACAAGTGTTTTAGTAA+GGG | - | chr7_3:85927396-85927415 | None:intergenic | 20.0% |
| !!! | AATTAACAAGTGTTTTAGTA+AGG | - | chr7_3:85927397-85927416 | None:intergenic | 20.0% |
| !!! | ATTTTATCTGATTTTGCATA+TGG | + | chr7_3:85927508-85927527 | Msa1133000:intron | 20.0% |
| !! | TACAAATACAATACAATACA+AGG | - | chr7_3:85928258-85928277 | None:intergenic | 20.0% |
| !!! | GAAATATCACTTCTTTTTTT+GGG | - | chr7_3:85928365-85928384 | None:intergenic | 20.0% |
| !!! | AGAAATATCACTTCTTTTTT+TGG | - | chr7_3:85928366-85928385 | None:intergenic | 20.0% |
| !! | TTAATAAATTAAACCAAACC+AGG | + | chr7_3:85928414-85928433 | Msa1133000:intron | 20.0% |
| !! | CTCATATAAAGTAGTATATA+TGG | - | chr7_3:85928510-85928529 | None:intergenic | 20.0% |
| !! | ATTATTCATGATTGAAATTC+CGG | + | chr7_3:85928588-85928607 | Msa1133000:intron | 20.0% |
| !! | AACATAAATAAGAGAATAAC+CGG | - | chr7_3:85928610-85928629 | None:intergenic | 20.0% |
| !! | TCCTTCTTGTTAAAATATAA+TGG | - | chr7_3:85928833-85928852 | None:intergenic | 20.0% |
| !! | ATAACCATTTATAACTTAAG+GGG | + | chr7_3:85928897-85928916 | Msa1133000:intron | 20.0% |
| !! | GAGATCAAATAAAATGAAAA+AGG | + | chr7_3:85928966-85928985 | Msa1133000:intron | 20.0% |
| !!! | GTTTCTTTTTTAATCATGTT+GGG | - | chr7_3:85928998-85929017 | None:intergenic | 20.0% |
| !!! | AGTTTCTTTTTTAATCATGT+TGG | - | chr7_3:85928999-85929018 | None:intergenic | 20.0% |
| !! | ATGATTAAAAAAGAAACTTG+AGG | + | chr7_3:85929001-85929020 | Msa1133000:intron | 20.0% |
| !! | TGATTAAAAAAGAAACTTGA+GGG | + | chr7_3:85929002-85929021 | Msa1133000:intron | 20.0% |
| !! | CTTTATCAGTATTAATGATT+TGG | + | chr7_3:85929072-85929091 | Msa1133000:intron | 20.0% |
| !!! | ATTTTGTATCTTTCTGAAAA+AGG | - | chr7_3:85929477-85929496 | None:intergenic | 20.0% |
| !!! | AATATGATTTTCTTAAACGA+TGG | - | chr7_3:85929932-85929951 | None:intergenic | 20.0% |
| !! | ATCGTTTAAGAAAATCATAT+TGG | + | chr7_3:85929931-85929950 | Msa1133000:three_prime_UTR | 20.0% |
| ! | ATAATTGTCATAATAAGGAC+AGG | - | chr7_3:85925629-85925648 | None:intergenic | 25.0% |
| ! | AGATGAATGAAACTGAAAAA+GGG | - | chr7_3:85925767-85925786 | None:intergenic | 25.0% |
| ! | AAGATGAATGAAACTGAAAA+AGG | - | chr7_3:85925768-85925787 | None:intergenic | 25.0% |
| ! | TTTCATCTTCATAATAAGGT+AGG | + | chr7_3:85925868-85925887 | Msa1133000:intron | 25.0% |
| ! | TTCATCTTCATAATAAGGTA+GGG | + | chr7_3:85925869-85925888 | Msa1133000:intron | 25.0% |
| ! | CTGAAAGTTACAAATTAAGA+GGG | - | chr7_3:85926202-85926221 | None:intergenic | 25.0% |
| ! | ACTGAAAGTTACAAATTAAG+AGG | - | chr7_3:85926203-85926222 | None:intergenic | 25.0% |
| !!! | TGTTTTTTTTTAGCACTCTT+TGG | + | chr7_3:85926279-85926298 | Msa1133000:intron | 25.0% |
| ! | TATGCAAACATAATAGACAT+TGG | - | chr7_3:85926357-85926376 | None:intergenic | 25.0% |
| ! | AATGTCTATTATGTTTGCAT+AGG | + | chr7_3:85926356-85926375 | Msa1133000:intron | 25.0% |
| ! | AGAGAAATTAACAACAACAT+TGG | - | chr7_3:85926466-85926485 | None:intergenic | 25.0% |
| !!! | CATTGTTTCTATGTTGTTTA+AGG | - | chr7_3:85926686-85926705 | None:intergenic | 25.0% |
| ! | CTTAAACAACATAGAAACAA+TGG | + | chr7_3:85926684-85926703 | Msa1133000:CDS | 25.0% |
| ! | ATGAAGTTAGCATGAATAAT+GGG | - | chr7_3:85927224-85927243 | None:intergenic | 25.0% |
| ! | TATGAAGTTAGCATGAATAA+TGG | - | chr7_3:85927225-85927244 | None:intergenic | 25.0% |
| !!! | TTGAGATTCCTTTTTTGTTA+AGG | - | chr7_3:85927323-85927342 | None:intergenic | 25.0% |
| ! | TCTACTAGTAAGATTTAGAT+GGG | - | chr7_3:85927595-85927614 | None:intergenic | 25.0% |
| ! | ATCTACTAGTAAGATTTAGA+TGG | - | chr7_3:85927596-85927615 | None:intergenic | 25.0% |
| !!! | AGTAGATTCTGAAATTAAAG+TGG | + | chr7_3:85927609-85927628 | Msa1133000:intron | 25.0% |
| !! | TTTAAACTAACCTTGGTAAT+TGG | - | chr7_3:85927811-85927830 | None:intergenic | 25.0% |
| ! | CTATAACTTTAAACTAACCT+TGG | - | chr7_3:85927818-85927837 | None:intergenic | 25.0% |
| ! | TCCAAATCTAGACAATTATT+GGG | - | chr7_3:85927866-85927885 | None:intergenic | 25.0% |
| ! | CAAAAATTACATAATGCACT+TGG | + | chr7_3:85927947-85927966 | Msa1133000:intron | 25.0% |
| !!! | CATGTTTGTTGTTTTAGTAA+TGG | - | chr7_3:85928067-85928086 | None:intergenic | 25.0% |
| ! | TCAATAATTCTTGCATCATT+CGG | + | chr7_3:85928203-85928222 | Msa1133000:intron | 25.0% |
| ! | CAAACGAAAAATAGACAAAA+GGG | - | chr7_3:85928786-85928805 | None:intergenic | 25.0% |
| ! | TCAAACGAAAAATAGACAAA+AGG | - | chr7_3:85928787-85928806 | None:intergenic | 25.0% |
| ! | GTTAAAATATAATGGCACAT+AGG | - | chr7_3:85928825-85928844 | None:intergenic | 25.0% |
| !!! | GCCATTATATTTTAACAAGA+AGG | + | chr7_3:85928829-85928848 | Msa1133000:intron | 25.0% |
| !! | TTTTAACAAGAAGGAAAAGA+AGG | + | chr7_3:85928838-85928857 | Msa1133000:intron | 25.0% |
| ! | TAACCATTTATAACTTAAGG+GGG | + | chr7_3:85928898-85928917 | Msa1133000:intron | 25.0% |
| !!! | GTTTTGTTTTCGTTATGAAA+AGG | + | chr7_3:85929096-85929115 | Msa1133000:intron | 25.0% |
| ! | TTGTTCCTCAATTTATAACT+TGG | + | chr7_3:85929695-85929714 | Msa1133000:CDS | 25.0% |
| ! | TGTTCCTCAATTTATAACTT+GGG | + | chr7_3:85929696-85929715 | Msa1133000:CDS | 25.0% |
| !! | TCCATTATTTCCTTTTCAAT+GGG | + | chr7_3:85929761-85929780 | Msa1133000:CDS | 25.0% |
| TGAAAGTTGAAGCTAAAACT+TGG | - | chr7_3:85925809-85925828 | None:intergenic | 30.0% | |
| GATGAAATTGTGGATTTGAA+AGG | - | chr7_3:85925855-85925874 | None:intergenic | 30.0% | |
| AAAAAAAAAGGCAGAAAGAG+AGG | - | chr7_3:85925937-85925956 | None:intergenic | 30.0% | |
| !! | AGCTCTTTAATTTGACTATC+TGG | + | chr7_3:85926015-85926034 | Msa1133000:intron | 30.0% |
| TGAAAGATGAAGAAGTAAAC+AGG | - | chr7_3:85926051-85926070 | None:intergenic | 30.0% | |
| TTTGTAACTTTCAGTTTCCT+TGG | + | chr7_3:85926208-85926227 | Msa1133000:intron | 30.0% | |
| ! | ACTCTCTCTTTTCCTTAATA+AGG | + | chr7_3:85926326-85926345 | Msa1133000:intron | 30.0% |
| !! | ACATTGGTTTGTCCTTATTA+AGG | - | chr7_3:85926341-85926360 | None:intergenic | 30.0% |
| AACTAGACACTTGCAAAAAT+AGG | - | chr7_3:85926538-85926557 | None:intergenic | 30.0% | |
| !! | TAATTTGAAAGCACCTTCAT+GGG | + | chr7_3:85926636-85926655 | Msa1133000:CDS | 30.0% |
| ATTTCAGTTAAATCCCATGA+AGG | - | chr7_3:85926652-85926671 | None:intergenic | 30.0% | |
| TTCATGGGATTTAACTGAAA+TGG | + | chr7_3:85926651-85926670 | Msa1133000:CDS | 30.0% | |
| GATTTAACTGAAATGGATCA+AGG | + | chr7_3:85926658-85926677 | Msa1133000:CDS | 30.0% | |
| AACAACATAGAAACAATGGA+TGG | + | chr7_3:85926688-85926707 | Msa1133000:CDS | 30.0% | |
| AAACAATGGATGGTTCAATT+AGG | + | chr7_3:85926698-85926717 | Msa1133000:CDS | 30.0% | |
| TTTGGAGATTACAGAACAAA+AGG | + | chr7_3:85926724-85926743 | Msa1133000:CDS | 30.0% | |
| !!! | TTTTCTGTTGATTTGAAGCT+TGG | + | chr7_3:85926751-85926770 | Msa1133000:CDS | 30.0% |
| !! | AGATGATGAAGATGTCATTT+TGG | - | chr7_3:85926839-85926858 | None:intergenic | 30.0% |
| AATGAAGTTCACATACCTTA+TGG | - | chr7_3:85926978-85926997 | None:intergenic | 30.0% | |
| ! | AATTTAGCCTTCATTAGAAG+AGG | + | chr7_3:85927285-85927304 | Msa1133000:intron | 30.0% |
| AGCACAATCCTTAACAAAAA+AGG | + | chr7_3:85927312-85927331 | Msa1133000:intron | 30.0% | |
| TTGGTTATAAATTCTCAACG+AGG | + | chr7_3:85927477-85927496 | Msa1133000:intron | 30.0% | |
| CTACTAGTAAGATTTAGATG+GGG | - | chr7_3:85927594-85927613 | None:intergenic | 30.0% | |
| TGGTGAAAATGATATTCTCT+AGG | + | chr7_3:85927629-85927648 | Msa1133000:intron | 30.0% | |
| GTAAGTTTCCTTAATTGTGT+AGG | + | chr7_3:85927664-85927683 | Msa1133000:intron | 30.0% | |
| TAGCTAACATATTATCTGAG+TGG | + | chr7_3:85927839-85927858 | Msa1133000:intron | 30.0% | |
| ACCCAATAATTGTCTAGATT+TGG | + | chr7_3:85927862-85927881 | Msa1133000:intron | 30.0% | |
| CTCCAAATCTAGACAATTAT+TGG | - | chr7_3:85927867-85927886 | None:intergenic | 30.0% | |
| TAAGATGTTTGTACCTATGT+GGG | - | chr7_3:85927909-85927928 | None:intergenic | 30.0% | |
| TTAAGATGTTTGTACCTATG+TGG | - | chr7_3:85927910-85927929 | None:intergenic | 30.0% | |
| TCATAAACATGGCAAATAAG+TGG | - | chr7_3:85928033-85928052 | None:intergenic | 30.0% | |
| TTTGACTGTGTGTAGTTAAT+TGG | + | chr7_3:85928293-85928312 | Msa1133000:intron | 30.0% | |
| ATAGTGCAGTAGTTATCTAT+AGG | + | chr7_3:85928637-85928656 | Msa1133000:intron | 30.0% | |
| TCTACTGTATTACTACATGA+AGG | - | chr7_3:85929123-85929142 | None:intergenic | 30.0% | |
| TATACATGTGAACTTGAGAA+TGG | - | chr7_3:85929201-85929220 | None:intergenic | 30.0% | |
| ! | GATAAACAAGACCTTTTTCT+TGG | + | chr7_3:85929312-85929331 | Msa1133000:CDS | 30.0% |
| AAGATGTTGTTCCAAGAAAA+AGG | - | chr7_3:85929326-85929345 | None:intergenic | 30.0% | |
| ! | GTATCTTTCTGAAAAAGGAT+TGG | - | chr7_3:85929472-85929491 | None:intergenic | 30.0% |
| ! | ATCTGATTCAATCCATTTTC+AGG | - | chr7_3:85929570-85929589 | None:intergenic | 30.0% |
| !! | TGAAAATGGATTGAATCAGA+TGG | + | chr7_3:85929569-85929588 | Msa1133000:CDS | 30.0% |
| AGAACCCAAGTTATAAATTG+AGG | - | chr7_3:85929703-85929722 | None:intergenic | 30.0% | |
| ATTATTATTCCCCTGAGAAT+GGG | - | chr7_3:85929733-85929752 | None:intergenic | 30.0% | |
| ! | CTCCATTATTTCCTTTTCAA+TGG | + | chr7_3:85929760-85929779 | Msa1133000:CDS | 30.0% |
| TCCCATTGAAAAGGAAATAA+TGG | - | chr7_3:85929765-85929784 | None:intergenic | 30.0% | |
| CTAATCTAATCCCATTGAAA+AGG | - | chr7_3:85929774-85929793 | None:intergenic | 30.0% | |
| TTTCAATGGGATTAGATTAG+AGG | + | chr7_3:85929774-85929793 | Msa1133000:exon | 30.0% | |
| GATCATCAGCAAACAAATTA+AGG | - | chr7_3:85929841-85929860 | None:intergenic | 30.0% | |
| CTGTATATGTAGCTTGAGAA+AGG | - | chr7_3:85925663-85925682 | None:intergenic | 35.0% | |
| GATTTGAAAGGACAATTGTG+TGG | - | chr7_3:85925843-85925862 | None:intergenic | 35.0% | |
| ATTGGCACTTTAATTGAGCA+AGG | - | chr7_3:85926448-85926467 | None:intergenic | 35.0% | |
| !! | TTGAGAAGCATCTTGTGTTA+TGG | + | chr7_3:85926606-85926625 | Msa1133000:intron | 35.0% |
| !! | GTAATTTGAAAGCACCTTCA+TGG | + | chr7_3:85926635-85926654 | Msa1133000:CDS | 35.0% |
| ! | GAAATTCTAGCACTGAATCA+GGG | + | chr7_3:85926782-85926801 | Msa1133000:CDS | 35.0% |
| CTTACAAAGTCCAAAGATGT+TGG | + | chr7_3:85926805-85926824 | Msa1133000:CDS | 35.0% | |
| TCTTCATCATCTTCAACTTC+AGG | + | chr7_3:85926847-85926866 | Msa1133000:CDS | 35.0% | |
| CTTCATCATCTTCAACTTCA+GGG | + | chr7_3:85926848-85926867 | Msa1133000:CDS | 35.0% | |
| TCAGATAGTTTCATGTCTTG+TGG | + | chr7_3:85926906-85926925 | Msa1133000:CDS | 35.0% | |
| ATAGTTTCATGTCTTGTGGA+TGG | + | chr7_3:85926910-85926929 | Msa1133000:CDS | 35.0% | |
| GTAACTGTAGAGACTATCAT+AGG | + | chr7_3:85926950-85926969 | Msa1133000:CDS | 35.0% | |
| TGACAAAGCATAACACACAA+GGG | - | chr7_3:85927097-85927116 | None:intergenic | 35.0% | |
| ATGACAAAGCATAACACACA+AGG | - | chr7_3:85927098-85927117 | None:intergenic | 35.0% | |
| CATACACACATGTTGTAACT+TGG | + | chr7_3:85927458-85927477 | Msa1133000:intron | 35.0% | |
| AGGAATTTGATGAAGGAAAG+AGG | + | chr7_3:85927700-85927719 | Msa1133000:CDS | 35.0% | |
| AAGCTACTACTTCGAGTAAT+AGG | - | chr7_3:85927783-85927802 | None:intergenic | 35.0% | |
| ! | AGCTTTTTGTCCAATTACCA+AGG | + | chr7_3:85927798-85927817 | Msa1133000:CDS | 35.0% |
| AAGATGTTTGTACCTATGTG+GGG | - | chr7_3:85927908-85927927 | None:intergenic | 35.0% | |
| AATTACATAATGCACTTGGC+TGG | + | chr7_3:85927951-85927970 | Msa1133000:intron | 35.0% | |
| CAAATAAGTGGACCAAATCA+AGG | - | chr7_3:85928021-85928040 | None:intergenic | 35.0% | |
| CCACTAGATTGTCATAAACA+TGG | - | chr7_3:85928044-85928063 | None:intergenic | 35.0% | |
| CCATGTTTATGACAATCTAG+TGG | + | chr7_3:85928041-85928060 | Msa1133000:intron | 35.0% | |
| !! | ACTTTTCAGCTTTTGAGTGA+GGG | + | chr7_3:85928120-85928139 | Msa1133000:intron | 35.0% |
| ! | GTTATCTATAGGTTTTGCTC+TGG | + | chr7_3:85928648-85928667 | Msa1133000:intron | 35.0% |
| AATGGCACATAGGAAACATT+TGG | - | chr7_3:85928815-85928834 | None:intergenic | 35.0% | |
| TTGCCCCCTTAAGTTATAAA+TGG | - | chr7_3:85928904-85928923 | None:intergenic | 35.0% | |
| ACTTGAGAATGGTAGCAATT+GGG | - | chr7_3:85929190-85929209 | None:intergenic | 35.0% | |
| AACTTGAGAATGGTAGCAAT+TGG | - | chr7_3:85929191-85929210 | None:intergenic | 35.0% | |
| ACACATGATCATCCTGAAAA+TGG | + | chr7_3:85929555-85929574 | Msa1133000:CDS | 35.0% | |
| ! | TCATCTTTTATGCAACCCTT+AGG | + | chr7_3:85929603-85929622 | Msa1133000:CDS | 35.0% |
| CATTATTATTCCCCTGAGAA+TGG | - | chr7_3:85929734-85929753 | None:intergenic | 35.0% | |
| ATCTTCCTCCTCTTCTTATA+AGG | + | chr7_3:85929809-85929828 | Msa1133000:three_prime_UTR | 35.0% | |
| CACTTTGTCTTAATGCATGA+AGG | + | chr7_3:85929892-85929911 | Msa1133000:three_prime_UTR | 35.0% | |
| TCATAATAAGGACAGGCTGT+TGG | - | chr7_3:85925622-85925641 | None:intergenic | 40.0% | |
| GTTGAAGCTAAAACTTGGAG+AGG | - | chr7_3:85925804-85925823 | None:intergenic | 40.0% | |
| !! | TTTTTAGCACTCTTTGGTGC+AGG | + | chr7_3:85926285-85926304 | Msa1133000:intron | 40.0% |
| AAGCATCTTGTGTTATGGAG+TGG | + | chr7_3:85926611-85926630 | Msa1133000:intron | 40.0% | |
| CAATGGATGGTTCAATTAGG+AGG | + | chr7_3:85926701-85926720 | Msa1133000:CDS | 40.0% | |
| GATGGTTCAATTAGGAGGTT+TGG | + | chr7_3:85926706-85926725 | Msa1133000:CDS | 40.0% | |
| CAGTGCTAGAATTTCCAACA+TGG | - | chr7_3:85926777-85926796 | None:intergenic | 40.0% | |
| ! | GGAAATTCTAGCACTGAATC+AGG | + | chr7_3:85926781-85926800 | Msa1133000:CDS | 40.0% |
| ACAAAGTCCAAAGATGTTGG+TGG | + | chr7_3:85926808-85926827 | Msa1133000:CDS | 40.0% | |
| GGTAAATCCACCAACATCTT+TGG | - | chr7_3:85926818-85926837 | None:intergenic | 40.0% | |
| AGAGCTAGAGCTATCAACAA+TGG | + | chr7_3:85926880-85926899 | Msa1133000:CDS | 40.0% | |
| GAGCTAGAGCTATCAACAAT+GGG | + | chr7_3:85926881-85926900 | Msa1133000:CDS | 40.0% | |
| ! | CAATTGGTGGACATAAGCAA+AGG | + | chr7_3:85927016-85927035 | Msa1133000:CDS | 40.0% |
| AAAAGAACCTGCTACATTGC+TGG | - | chr7_3:85927047-85927066 | None:intergenic | 40.0% | |
| GGGGAAACACAAAAAGCTTA+TGG | - | chr7_3:85927077-85927096 | None:intergenic | 40.0% | |
| GACAAAGCATAACACACAAG+GGG | - | chr7_3:85927096-85927115 | None:intergenic | 40.0% | |
| GCTTCTACCTCTTCTAATGA+AGG | - | chr7_3:85927295-85927314 | None:intergenic | 40.0% | |
| GCATGGAACCTACACAATTA+AGG | - | chr7_3:85927675-85927694 | None:intergenic | 40.0% | |
| !! | CATCAAATTCCTCTAGAGCA+TGG | - | chr7_3:85927692-85927711 | None:intergenic | 40.0% |
| !! | GCTCTAGAGGAATTTGATGA+AGG | + | chr7_3:85927693-85927712 | Msa1133000:CDS | 40.0% |
| CTACTTCGAGTAATAGGTTC+TGG | - | chr7_3:85927777-85927796 | None:intergenic | 40.0% | |
| TAAGTGGACCAAATCAAGGA+TGG | - | chr7_3:85928017-85928036 | None:intergenic | 40.0% | |
| !! | GACTTTTCAGCTTTTGAGTG+AGG | + | chr7_3:85928119-85928138 | Msa1133000:intron | 40.0% |
| GGTTCATCATAGCAGTAGAA+GGG | - | chr7_3:85929224-85929243 | None:intergenic | 40.0% | |
| TGCTATGATGAACCCTACTT+GGG | + | chr7_3:85929230-85929249 | Msa1133000:CDS | 40.0% | |
| !! | GCATTTGTTGGTGTTGATTG+TGG | - | chr7_3:85929281-85929300 | None:intergenic | 40.0% |
| !! | GGTCTTGTTTATCAACCAGA+TGG | - | chr7_3:85929305-85929324 | None:intergenic | 40.0% |
| TGATCATGTGTTTGTGGTAC+TGG | - | chr7_3:85929546-85929565 | None:intergenic | 40.0% | |
| TCAGGATGATCATGTGTTTG+TGG | - | chr7_3:85929552-85929571 | None:intergenic | 40.0% | |
| TCATGCAAACTCAAGCCTAA+GGG | - | chr7_3:85929621-85929640 | None:intergenic | 40.0% | |
| AGTTTGCATGACCATAGCTT+GGG | + | chr7_3:85929630-85929649 | Msa1133000:CDS | 40.0% | |
| TTGGGTTCAAATGATCAGAG+TGG | + | chr7_3:85929669-85929688 | Msa1133000:CDS | 40.0% | |
| TTCTAGTGAATCCCATTCTC+AGG | + | chr7_3:85929719-85929738 | Msa1133000:CDS | 40.0% | |
| TCTAGTGAATCCCATTCTCA+GGG | + | chr7_3:85929720-85929739 | Msa1133000:CDS | 40.0% | |
| GACAACCTTATAAGAAGAGG+AGG | - | chr7_3:85929817-85929836 | None:intergenic | 40.0% | |
| GGTGACAACCTTATAAGAAG+AGG | - | chr7_3:85929820-85929839 | None:intergenic | 40.0% | |
| GTCTTAATGCATGAAGGCAA+TGG | + | chr7_3:85929898-85929917 | Msa1133000:three_prime_UTR | 40.0% | |
| ! | GATTTGAAGCTTGGCCATGT+TGG | + | chr7_3:85926760-85926779 | Msa1133000:CDS | 45.0% |
| AGACTATCATAGGCGCCATA+AGG | + | chr7_3:85926960-85926979 | Msa1133000:CDS | 45.0% | |
| ACTTCATTCCAAGACTGCAC+AGG | + | chr7_3:85926990-85927009 | Msa1133000:CDS | 45.0% | |
| AATTGTGACCTGTGCAGTCT+TGG | - | chr7_3:85927001-85927020 | None:intergenic | 45.0% | |
| AAGACTGCACAGGTCACAAT+TGG | + | chr7_3:85927000-85927019 | Msa1133000:CDS | 45.0% | |
| ATGAAGGAAAGAGGAGCTGT+AGG | + | chr7_3:85927709-85927728 | Msa1133000:CDS | 45.0% | |
| AGCTGTAGGAAACGCTTAGA+TGG | + | chr7_3:85927723-85927742 | Msa1133000:CDS | 45.0% | |
| ! | GTTGTGGTTTTCTTCTCCGT+CGG | - | chr7_3:85927755-85927774 | None:intergenic | 45.0% |
| ! | CGAGTAATAGGTTCTGGTTG+TGG | - | chr7_3:85927771-85927790 | None:intergenic | 45.0% |
| ! | TTTGGAGCAGACAATTGCTG+AGG | + | chr7_3:85927880-85927899 | Msa1133000:intron | 45.0% |
| TGGACCAAATCAAGGATGGT+GGG | - | chr7_3:85928013-85928032 | None:intergenic | 45.0% | |
| ACTAGATACGACACCTGGTT+TGG | - | chr7_3:85928430-85928449 | None:intergenic | 45.0% | |
| TAGACACTAGATACGACACC+TGG | - | chr7_3:85928435-85928454 | None:intergenic | 45.0% | |
| GGGTTCATCATAGCAGTAGA+AGG | - | chr7_3:85929225-85929244 | None:intergenic | 45.0% | |
| CTGCTATGATGAACCCTACT+TGG | + | chr7_3:85929229-85929248 | Msa1133000:CDS | 45.0% | |
| ATGATGAACCCTACTTGGGT+TGG | + | chr7_3:85929234-85929253 | Msa1133000:CDS | 45.0% | |
| !! | GTTGGTGTTGATTGTGGCTA+TGG | - | chr7_3:85929275-85929294 | None:intergenic | 45.0% |
| ACACCAACAAATGCACCATC+TGG | + | chr7_3:85929287-85929306 | Msa1133000:CDS | 45.0% | |
| CAACCAGATGGTGCATTTGT+TGG | - | chr7_3:85929293-85929312 | None:intergenic | 45.0% | |
| TCAACCAGCAGCTACAAAGA+AGG | + | chr7_3:85929345-85929364 | Msa1133000:CDS | 45.0% | |
| CAACCAGCAGCTACAAAGAA+GGG | + | chr7_3:85929346-85929365 | Msa1133000:CDS | 45.0% | |
| TTTCCCTTCTTTGTAGCTGC+TGG | - | chr7_3:85929352-85929371 | None:intergenic | 45.0% | |
| ! | AAGAGGTTGGTTGTTCACAG+TGG | - | chr7_3:85929415-85929434 | None:intergenic | 45.0% |
| GTCATGCAAACTCAAGCCTA+AGG | - | chr7_3:85929622-85929641 | None:intergenic | 45.0% | |
| GAGTTTGCATGACCATAGCT+TGG | + | chr7_3:85929629-85929648 | Msa1133000:CDS | 45.0% | |
| GTTTGCATGACCATAGCTTG+GGG | + | chr7_3:85929631-85929650 | Msa1133000:CDS | 45.0% | |
| CTAGTGAATCCCATTCTCAG+GGG | + | chr7_3:85929721-85929740 | Msa1133000:CDS | 45.0% | |
| !! | TAAATTATTATTATATTACT+TGG | + | chr7_3:85925718-85925737 | Msa1133000:five_prime_UTR | 5.0% |
| !! | AAAATAAAACAAAAAAAAAA+AGG | - | chr7_3:85925949-85925968 | None:intergenic | 5.0% |
| TCCTTGGAACTCTCTCAGCT+TGG | + | chr7_3:85926224-85926243 | Msa1133000:intron | 50.0% | |
| ACTGCACAGGTCACAATTGG+TGG | + | chr7_3:85927003-85927022 | Msa1133000:CDS | 50.0% | |
| GTGTAGGTTCCATGCTCTAG+AGG | + | chr7_3:85927680-85927699 | Msa1133000:intron | 50.0% | |
| GCTTAGATGGTCACAACCGA+CGG | + | chr7_3:85927736-85927755 | Msa1133000:CDS | 50.0% | |
| ATTGCTGAGGATCCCCACAT+AGG | + | chr7_3:85927893-85927912 | Msa1133000:intron | 50.0% | |
| ACATAATGCACTTGGCTGGC+TGG | + | chr7_3:85927955-85927974 | Msa1133000:intron | 50.0% | |
| GTGGACCAAATCAAGGATGG+TGG | - | chr7_3:85928014-85928033 | None:intergenic | 50.0% | |
| !! | ATGAACCCTACTTGGGTTGG+AGG | + | chr7_3:85929237-85929256 | Msa1133000:CDS | 50.0% |
| CATCTCCTCCAACCCAAGTA+GGG | - | chr7_3:85929245-85929264 | None:intergenic | 50.0% | |
| ACATCTCCTCCAACCCAAGT+AGG | - | chr7_3:85929246-85929265 | None:intergenic | 50.0% | |
| !! | CTTGGGTTGGAGGAGATGTT+AGG | + | chr7_3:85929247-85929266 | Msa1133000:CDS | 50.0% |
| TGGATGAAGCTGGAAGAGGT+TGG | - | chr7_3:85929428-85929447 | None:intergenic | 50.0% | |
| CTCATGGATGAAGCTGGAAG+AGG | - | chr7_3:85929432-85929451 | None:intergenic | 50.0% | |
| ! | GGGTCTGTGGACTCAGTTTT+GGG | + | chr7_3:85929651-85929670 | Msa1133000:CDS | 50.0% |
| GCCAAGCTGAGAGAGTTCCA+AGG | - | chr7_3:85926228-85926247 | None:intergenic | 55.0% | |
| GGTTCTGCCAGCAATGTAGC+AGG | + | chr7_3:85927037-85927056 | Msa1133000:CDS | 55.0% | |
| !! | ATCAAGGATGGTGGGCAGCA+TGG | - | chr7_3:85928005-85928024 | None:intergenic | 55.0% |
| GCTGCCCACCATCCTTGATT+TGG | + | chr7_3:85928006-85928025 | Msa1133000:intron | 55.0% | |
| TTCACAGTGGCTGCTGCTGT+TGG | - | chr7_3:85929402-85929421 | None:intergenic | 55.0% | |
| GTGCGACTCATGGATGAAGC+TGG | - | chr7_3:85929438-85929457 | None:intergenic | 55.0% | |
| CCTGCTAAACGTGCGACTCA+TGG | - | chr7_3:85929448-85929467 | None:intergenic | 55.0% | |
| CCATGAGTCGCACGTTTAGC+AGG | + | chr7_3:85929445-85929464 | Msa1133000:CDS | 55.0% | |
| TGACCATAGCTTGGGGTCTG+TGG | + | chr7_3:85929638-85929657 | Msa1133000:CDS | 55.0% | |
| AGTCCACAGACCCCAAGCTA+TGG | - | chr7_3:85929644-85929663 | None:intergenic | 55.0% | |
| ! | GGGGTCTGTGGACTCAGTTT+TGG | + | chr7_3:85929650-85929669 | Msa1133000:CDS | 55.0% |
| ! | AATGCACTTGGCTGGCTGGC+TGG | + | chr7_3:85927959-85927978 | Msa1133000:intron | 60.0% |
| GGTGGGCAGCATGGTGAGTG+AGG | - | chr7_3:85927996-85928015 | None:intergenic | 65.0% | |
| CAGTGGCTGCTGCTGTTGGC+TGG | - | chr7_3:85929398-85929417 | None:intergenic | 65.0% | |
| ! | CACTTGGCTGGCTGGCTGGC+TGG | + | chr7_3:85927963-85927982 | Msa1133000:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 85925596 | 85929954 | 85925596 | ID=Msa1133000;Name=Msa1133000 |
| chr7_3 | mRNA | 85925596 | 85929954 | 85925596 | ID=Msa1133000-mRNA-1;Parent=Msa1133000;Name=Msa1133000-mRNA-1;_AED=0.16;_eAED=0.16;_QI=301|1|1|1|0.66|0.5|4|166|390 |
| chr7_3 | exon | 85925596 | 85925885 | 85925596 | ID=Msa1133000-mRNA-1:exon:25817;Parent=Msa1133000-mRNA-1 |
| chr7_3 | exon | 85926614 | 85927058 | 85926614 | ID=Msa1133000-mRNA-1:exon:25818;Parent=Msa1133000-mRNA-1 |
| chr7_3 | exon | 85927686 | 85927819 | 85927686 | ID=Msa1133000-mRNA-1:exon:25819;Parent=Msa1133000-mRNA-1 |
| chr7_3 | exon | 85929184 | 85929954 | 85929184 | ID=Msa1133000-mRNA-1:exon:25820;Parent=Msa1133000-mRNA-1 |
| chr7_3 | five_prime_UTR | 85925596 | 85925885 | 85925596 | ID=Msa1133000-mRNA-1:five_prime_utr;Parent=Msa1133000-mRNA-1 |
| chr7_3 | five_prime_UTR | 85926614 | 85926624 | 85926614 | ID=Msa1133000-mRNA-1:five_prime_utr;Parent=Msa1133000-mRNA-1 |
| chr7_3 | CDS | 85926625 | 85927058 | 85926625 | ID=Msa1133000-mRNA-1:cds;Parent=Msa1133000-mRNA-1 |
| chr7_3 | CDS | 85927686 | 85927819 | 85927686 | ID=Msa1133000-mRNA-1:cds;Parent=Msa1133000-mRNA-1 |
| chr7_3 | CDS | 85929184 | 85929788 | 85929184 | ID=Msa1133000-mRNA-1:cds;Parent=Msa1133000-mRNA-1 |
| chr7_3 | three_prime_UTR | 85929789 | 85929954 | 85929789 | ID=Msa1133000-mRNA-1:three_prime_utr;Parent=Msa1133000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
