Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54561.t1 | XP_013456290.1 | 97.7 | 264 | 6 | 0 | 1 | 264 | 1 | 264 | 9.60E-124 | 453 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54561.t1 | Q9LX31 | 59.3 | 189 | 70 | 2 | 79 | 264 | 81 | 265 | 1.3e-57 | 224.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54561.t1 | A0A072ULR7 | 97.7 | 264 | 6 | 0 | 1 | 264 | 1 | 264 | 6.9e-124 | 453.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene54561 | 0.851052 | 1.14E-60 | -1.69E-46 |
| MS.gene049171 | MS.gene54561 | 0.881482 | 2.31E-70 | -1.69E-46 |
| MS.gene049173 | MS.gene54561 | 0.862058 | 6.63E-64 | -1.69E-46 |
| MS.gene049217 | MS.gene54561 | 0.899443 | 1.97E-77 | -1.69E-46 |
| MS.gene049222 | MS.gene54561 | 0.881514 | 2.25E-70 | -1.69E-46 |
| MS.gene049232 | MS.gene54561 | 0.822669 | 2.09E-53 | -1.69E-46 |
| MS.gene049285 | MS.gene54561 | 0.907056 | 7.65E-81 | -1.69E-46 |
| MS.gene049320 | MS.gene54561 | 0.913783 | 4.12E-84 | -1.69E-46 |
| MS.gene04939 | MS.gene54561 | 0.811 | 8.71E-51 | -1.69E-46 |
| MS.gene049427 | MS.gene54561 | 0.8496 | 2.91E-60 | -1.69E-46 |
| MS.gene049609 | MS.gene54561 | 0.869777 | 2.40E-66 | -1.69E-46 |
| MS.gene049614 | MS.gene54561 | 0.802173 | 6.36E-49 | -1.69E-46 |
| MS.gene049615 | MS.gene54561 | 0.83343 | 5.36E-56 | -1.69E-46 |
| MS.gene049627 | MS.gene54561 | 0.822179 | 2.72E-53 | -1.69E-46 |
| MS.gene049633 | MS.gene54561 | 0.826356 | 2.84E-54 | -1.69E-46 |
| MS.gene049805 | MS.gene54561 | 0.891266 | 4.65E-74 | -1.69E-46 |
| MS.gene050076 | MS.gene54561 | 0.827218 | 1.77E-54 | -1.69E-46 |
| MS.gene05010 | MS.gene54561 | 0.846518 | 2.07E-59 | -1.69E-46 |
| MS.gene050163 | MS.gene54561 | 0.913736 | 4.35E-84 | -1.69E-46 |
| MS.gene050165 | MS.gene54561 | 0.889989 | 1.48E-73 | -1.69E-46 |
| MS.gene050333 | MS.gene54561 | 0.886355 | 3.68E-72 | -1.69E-46 |
| MS.gene050353 | MS.gene54561 | -0.811049 | 8.50E-51 | -1.69E-46 |
| MS.gene050432 | MS.gene54561 | 0.849563 | 2.98E-60 | -1.69E-46 |
| MS.gene050444 | MS.gene54561 | 0.817332 | 3.48E-52 | -1.69E-46 |
| MS.gene050475 | MS.gene54561 | -0.811431 | 7.02E-51 | -1.69E-46 |
| MS.gene050504 | MS.gene54561 | 0.889032 | 3.48E-73 | -1.69E-46 |
| MS.gene050518 | MS.gene54561 | 0.895258 | 1.14E-75 | -1.69E-46 |
| MS.gene050520 | MS.gene54561 | 0.812742 | 3.64E-51 | -1.69E-46 |
| MS.gene050538 | MS.gene54561 | 0.80915 | 2.18E-50 | -1.69E-46 |
| MS.gene050541 | MS.gene54561 | -0.80916 | 2.17E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene54561 | 0.863893 | 1.80E-64 | -1.69E-46 |
| MS.gene050593 | MS.gene54561 | 0.848536 | 5.76E-60 | -1.69E-46 |
| MS.gene050612 | MS.gene54561 | 0.887752 | 1.08E-72 | -1.69E-46 |
| MS.gene050662 | MS.gene54561 | 0.828361 | 9.38E-55 | -1.69E-46 |
| MS.gene050675 | MS.gene54561 | 0.868754 | 5.16E-66 | -1.69E-46 |
| MS.gene050686 | MS.gene54561 | 0.848403 | 6.27E-60 | -1.69E-46 |
| MS.gene050699 | MS.gene54561 | 0.900647 | 5.94E-78 | -1.69E-46 |
| MS.gene050747 | MS.gene54561 | 0.85552 | 5.97E-62 | -1.69E-46 |
| MS.gene050767 | MS.gene54561 | 0.883176 | 5.60E-71 | -1.69E-46 |
| MS.gene050770 | MS.gene54561 | 0.881957 | 1.56E-70 | -1.69E-46 |
| MS.gene050772 | MS.gene54561 | 0.89665 | 3.01E-76 | -1.69E-46 |
| MS.gene05080 | MS.gene54561 | 0.836171 | 1.09E-56 | -1.69E-46 |
| MS.gene050868 | MS.gene54561 | 0.806286 | 8.85E-50 | -1.69E-46 |
| MS.gene050871 | MS.gene54561 | 0.804626 | 1.97E-49 | -1.69E-46 |
| MS.gene050950 | MS.gene54561 | 0.844901 | 5.67E-59 | -1.69E-46 |
| MS.gene050986 | MS.gene54561 | 0.885172 | 1.02E-71 | -1.69E-46 |
| MS.gene05100 | MS.gene54561 | 0.905986 | 2.40E-80 | -1.69E-46 |
| MS.gene05101 | MS.gene54561 | 0.810538 | 1.10E-50 | -1.69E-46 |
| MS.gene05105 | MS.gene54561 | 0.813941 | 1.98E-51 | -1.69E-46 |
| MS.gene051167 | MS.gene54561 | -0.801056 | 1.08E-48 | -1.69E-46 |
| MS.gene051228 | MS.gene54561 | 0.853992 | 1.66E-61 | -1.69E-46 |
| MS.gene051317 | MS.gene54561 | 0.810341 | 1.21E-50 | -1.69E-46 |
| MS.gene051336 | MS.gene54561 | 0.803543 | 3.32E-49 | -1.69E-46 |
| MS.gene051387 | MS.gene54561 | 0.844654 | 6.61E-59 | -1.69E-46 |
| MS.gene051509 | MS.gene54561 | 0.805463 | 1.32E-49 | -1.69E-46 |
| MS.gene051551 | MS.gene54561 | 0.884224 | 2.30E-71 | -1.69E-46 |
| MS.gene051666 | MS.gene54561 | 0.882514 | 9.77E-71 | -1.69E-46 |
| MS.gene051692 | MS.gene54561 | 0.867981 | 9.16E-66 | -1.69E-46 |
| MS.gene051694 | MS.gene54561 | 0.847486 | 1.12E-59 | -1.69E-46 |
| MS.gene051810 | MS.gene54561 | 0.879665 | 1.04E-69 | -1.69E-46 |
| MS.gene051858 | MS.gene54561 | 0.853112 | 2.96E-61 | -1.69E-46 |
| MS.gene051949 | MS.gene54561 | 0.824475 | 7.91E-54 | -1.69E-46 |
| MS.gene052164 | MS.gene54561 | 0.850521 | 1.61E-60 | -1.69E-46 |
| MS.gene052271 | MS.gene54561 | 0.926159 | 6.87E-91 | -1.69E-46 |
| MS.gene052290 | MS.gene54561 | 0.839522 | 1.51E-57 | -1.69E-46 |
| MS.gene052322 | MS.gene54561 | 0.818113 | 2.32E-52 | -1.69E-46 |
| MS.gene052379 | MS.gene54561 | 0.859158 | 5.02E-63 | -1.69E-46 |
| MS.gene052421 | MS.gene54561 | 0.842471 | 2.53E-58 | -1.69E-46 |
| MS.gene052481 | MS.gene54561 | 0.823324 | 1.47E-53 | -1.69E-46 |
| MS.gene052482 | MS.gene54561 | 0.820941 | 5.26E-53 | -1.69E-46 |
| MS.gene052484 | MS.gene54561 | 0.843474 | 1.37E-58 | -1.69E-46 |
| MS.gene052485 | MS.gene54561 | 0.801986 | 6.95E-49 | -1.69E-46 |
| MS.gene052486 | MS.gene54561 | 0.824766 | 6.76E-54 | -1.69E-46 |
| MS.gene052501 | MS.gene54561 | 0.80536 | 1.39E-49 | -1.69E-46 |
| MS.gene052503 | MS.gene54561 | 0.838659 | 2.52E-57 | -1.69E-46 |
| MS.gene052506 | MS.gene54561 | 0.829771 | 4.27E-55 | -1.69E-46 |
| MS.gene052605 | MS.gene54561 | 0.801885 | 7.29E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene54561 | 0.882305 | 1.16E-70 | -1.69E-46 |
| MS.gene052670 | MS.gene54561 | 0.821306 | 4.33E-53 | -1.69E-46 |
| MS.gene052822 | MS.gene54561 | 0.834025 | 3.80E-56 | -1.69E-46 |
| MS.gene052823 | MS.gene54561 | 0.82725 | 1.74E-54 | -1.69E-46 |
| MS.gene052825 | MS.gene54561 | 0.821581 | 3.74E-53 | -1.69E-46 |
| MS.gene052916 | MS.gene54561 | 0.839902 | 1.20E-57 | -1.69E-46 |
| MS.gene052966 | MS.gene54561 | 0.815519 | 8.87E-52 | -1.69E-46 |
| MS.gene053009 | MS.gene54561 | 0.87855 | 2.57E-69 | -1.69E-46 |
| MS.gene053103 | MS.gene54561 | 0.849427 | 3.26E-60 | -1.69E-46 |
| MS.gene053104 | MS.gene54561 | 0.862648 | 4.37E-64 | -1.69E-46 |
| MS.gene053203 | MS.gene54561 | 0.835773 | 1.38E-56 | -1.69E-46 |
| MS.gene053207 | MS.gene54561 | 0.894997 | 1.46E-75 | -1.69E-46 |
| MS.gene053213 | MS.gene54561 | 0.917532 | 4.74E-86 | -1.69E-46 |
| MS.gene053286 | MS.gene54561 | 0.914235 | 2.43E-84 | -1.69E-46 |
| MS.gene053322 | MS.gene54561 | 0.906355 | 1.62E-80 | -1.69E-46 |
| MS.gene053436 | MS.gene54561 | 0.867962 | 9.29E-66 | -1.69E-46 |
| MS.gene053480 | MS.gene54561 | 0.800565 | 1.36E-48 | -1.69E-46 |
| MS.gene053574 | MS.gene54561 | 0.865019 | 8.00E-65 | -1.69E-46 |
| MS.gene053626 | MS.gene54561 | 0.82843 | 9.03E-55 | -1.69E-46 |
| MS.gene053632 | MS.gene54561 | 0.915175 | 8.04E-85 | -1.69E-46 |
| MS.gene053813 | MS.gene54561 | 0.843649 | 1.23E-58 | -1.69E-46 |
| MS.gene053824 | MS.gene54561 | 0.805122 | 1.55E-49 | -1.69E-46 |
| MS.gene053915 | MS.gene54561 | 0.820681 | 6.03E-53 | -1.69E-46 |
| MS.gene053916 | MS.gene54561 | 0.862396 | 5.22E-64 | -1.69E-46 |
| MS.gene054376 | MS.gene54561 | 0.865918 | 4.17E-65 | -1.69E-46 |
| MS.gene054408 | MS.gene54561 | 0.828297 | 9.72E-55 | -1.69E-46 |
| MS.gene054595 | MS.gene54561 | 0.878385 | 2.93E-69 | -1.69E-46 |
| MS.gene054600 | MS.gene54561 | 0.892679 | 1.27E-74 | -1.69E-46 |
| MS.gene054642 | MS.gene54561 | 0.918841 | 9.47E-87 | -1.69E-46 |
| MS.gene05470 | MS.gene54561 | 0.820315 | 7.32E-53 | -1.69E-46 |
| MS.gene054802 | MS.gene54561 | 0.853649 | 2.08E-61 | -1.69E-46 |
| MS.gene054803 | MS.gene54561 | 0.852088 | 5.81E-61 | -1.69E-46 |
| MS.gene054804 | MS.gene54561 | 0.857401 | 1.67E-62 | -1.69E-46 |
| MS.gene054927 | MS.gene54561 | 0.836429 | 9.41E-57 | -1.69E-46 |
| MS.gene054954 | MS.gene54561 | 0.880193 | 6.71E-70 | -1.69E-46 |
| MS.gene05505 | MS.gene54561 | 0.860403 | 2.12E-63 | -1.69E-46 |
| MS.gene055154 | MS.gene54561 | -0.812713 | 3.69E-51 | -1.69E-46 |
| MS.gene055206 | MS.gene54561 | 0.865077 | 7.67E-65 | -1.69E-46 |
| MS.gene055212 | MS.gene54561 | 0.823933 | 1.06E-53 | -1.69E-46 |
| MS.gene055254 | MS.gene54561 | 0.827697 | 1.36E-54 | -1.69E-46 |
| MS.gene055289 | MS.gene54561 | 0.814433 | 1.54E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene54561 | 0.911137 | 8.55E-83 | -1.69E-46 |
| MS.gene055397 | MS.gene54561 | 0.889079 | 3.34E-73 | -1.69E-46 |
| MS.gene055412 | MS.gene54561 | 0.833566 | 4.95E-56 | -1.69E-46 |
| MS.gene055499 | MS.gene54561 | 0.894237 | 2.98E-75 | -1.69E-46 |
| MS.gene055502 | MS.gene54561 | 0.885703 | 6.47E-72 | -1.69E-46 |
| MS.gene055577 | MS.gene54561 | 0.850575 | 1.55E-60 | -1.69E-46 |
| MS.gene055636 | MS.gene54561 | 0.860606 | 1.84E-63 | -1.69E-46 |
| MS.gene055638 | MS.gene54561 | 0.858293 | 9.10E-63 | -1.69E-46 |
| MS.gene055647 | MS.gene54561 | 0.907785 | 3.48E-81 | -1.69E-46 |
| MS.gene055722 | MS.gene54561 | 0.890984 | 6.01E-74 | -1.69E-46 |
| MS.gene055748 | MS.gene54561 | 0.831352 | 1.75E-55 | -1.69E-46 |
| MS.gene055750 | MS.gene54561 | 0.82544 | 4.68E-54 | -1.69E-46 |
| MS.gene055751 | MS.gene54561 | 0.822923 | 1.83E-53 | -1.69E-46 |
| MS.gene055776 | MS.gene54561 | 0.801041 | 1.09E-48 | -1.69E-46 |
| MS.gene05592 | MS.gene54561 | 0.887655 | 1.18E-72 | -1.69E-46 |
| MS.gene055941 | MS.gene54561 | 0.864345 | 1.30E-64 | -1.69E-46 |
| MS.gene055956 | MS.gene54561 | -0.827575 | 1.45E-54 | -1.69E-46 |
| MS.gene056083 | MS.gene54561 | 0.883972 | 2.85E-71 | -1.69E-46 |
| MS.gene056374 | MS.gene54561 | 0.963808 | 1.53E-122 | -1.69E-46 |
| MS.gene056409 | MS.gene54561 | 0.807128 | 5.88E-50 | -1.69E-46 |
| MS.gene056449 | MS.gene54561 | 0.819922 | 9.00E-53 | -1.69E-46 |
| MS.gene056487 | MS.gene54561 | 0.815046 | 1.13E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene54561 | 0.830282 | 3.21E-55 | -1.69E-46 |
| MS.gene056510 | MS.gene54561 | 0.869794 | 2.37E-66 | -1.69E-46 |
| MS.gene056549 | MS.gene54561 | 0.83561 | 1.52E-56 | -1.69E-46 |
| MS.gene056609 | MS.gene54561 | 0.809699 | 1.66E-50 | -1.69E-46 |
| MS.gene056610 | MS.gene54561 | 0.803504 | 3.38E-49 | -1.69E-46 |
| MS.gene05664 | MS.gene54561 | 0.805033 | 1.62E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene54561 | 0.913646 | 4.83E-84 | -1.69E-46 |
| MS.gene056692 | MS.gene54561 | 0.829708 | 4.42E-55 | -1.69E-46 |
| MS.gene056897 | MS.gene54561 | 0.805621 | 1.22E-49 | -1.69E-46 |
| MS.gene056942 | MS.gene54561 | 0.801899 | 7.24E-49 | -1.69E-46 |
| MS.gene056946 | MS.gene54561 | 0.80111 | 1.05E-48 | -1.69E-46 |
| MS.gene057011 | MS.gene54561 | 0.857366 | 1.71E-62 | -1.69E-46 |
| MS.gene057076 | MS.gene54561 | 0.829242 | 5.74E-55 | -1.69E-46 |
| MS.gene057086 | MS.gene54561 | 0.806916 | 6.52E-50 | -1.69E-46 |
| MS.gene057129 | MS.gene54561 | 0.921996 | 1.74E-88 | -1.69E-46 |
| MS.gene057146 | MS.gene54561 | 0.855311 | 6.87E-62 | -1.69E-46 |
| MS.gene057196 | MS.gene54561 | 0.805499 | 1.30E-49 | -1.69E-46 |
| MS.gene057246 | MS.gene54561 | 0.802623 | 5.14E-49 | -1.69E-46 |
| MS.gene057285 | MS.gene54561 | 0.815237 | 1.02E-51 | -1.69E-46 |
| MS.gene057295 | MS.gene54561 | 0.8392 | 1.83E-57 | -1.69E-46 |
| MS.gene057331 | MS.gene54561 | 0.874274 | 7.68E-68 | -1.69E-46 |
| MS.gene05735 | MS.gene54561 | 0.812993 | 3.21E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene54561 | 0.920841 | 7.67E-88 | -1.69E-46 |
| MS.gene057658 | MS.gene54561 | 0.82068 | 6.04E-53 | -1.69E-46 |
| MS.gene057734 | MS.gene54561 | 0.819817 | 9.52E-53 | -1.69E-46 |
| MS.gene057775 | MS.gene54561 | 0.808552 | 2.93E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene54561 | 0.840927 | 6.47E-58 | -1.69E-46 |
| MS.gene057856 | MS.gene54561 | 0.809108 | 2.23E-50 | -1.69E-46 |
| MS.gene057926 | MS.gene54561 | 0.830825 | 2.36E-55 | -1.69E-46 |
| MS.gene058006 | MS.gene54561 | 0.824372 | 8.37E-54 | -1.69E-46 |
| MS.gene058019 | MS.gene54561 | 0.893297 | 7.17E-75 | -1.69E-46 |
| MS.gene058130 | MS.gene54561 | 0.812245 | 4.67E-51 | -1.69E-46 |
| MS.gene058293 | MS.gene54561 | 0.844538 | 7.11E-59 | -1.69E-46 |
| MS.gene058323 | MS.gene54561 | 0.839328 | 1.69E-57 | -1.69E-46 |
| MS.gene05837 | MS.gene54561 | 0.810635 | 1.04E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene54561 | 0.924786 | 4.42E-90 | -1.69E-46 |
| MS.gene058544 | MS.gene54561 | 0.872958 | 2.13E-67 | -1.69E-46 |
| MS.gene058660 | MS.gene54561 | 0.827542 | 1.48E-54 | -1.69E-46 |
| MS.gene058723 | MS.gene54561 | 0.863255 | 2.84E-64 | -1.69E-46 |
| MS.gene058773 | MS.gene54561 | 0.870747 | 1.16E-66 | -1.69E-46 |
| MS.gene058838 | MS.gene54561 | 0.842203 | 2.98E-58 | -1.69E-46 |
| MS.gene05883 | MS.gene54561 | 0.833334 | 5.66E-56 | -1.69E-46 |
| MS.gene058903 | MS.gene54561 | 0.820825 | 5.59E-53 | -1.69E-46 |
| MS.gene058993 | MS.gene54561 | 0.808844 | 2.54E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene54561 | 0.893306 | 7.11E-75 | -1.69E-46 |
| MS.gene059023 | MS.gene54561 | 0.836108 | 1.13E-56 | -1.69E-46 |
| MS.gene059029 | MS.gene54561 | 0.873176 | 1.80E-67 | -1.69E-46 |
| MS.gene05913 | MS.gene54561 | 0.815779 | 7.76E-52 | -1.69E-46 |
| MS.gene05934 | MS.gene54561 | 0.834 | 3.86E-56 | -1.69E-46 |
| MS.gene059367 | MS.gene54561 | 0.845523 | 3.85E-59 | -1.69E-46 |
| MS.gene059368 | MS.gene54561 | 0.81842 | 1.98E-52 | -1.69E-46 |
| MS.gene059455 | MS.gene54561 | 0.813509 | 2.47E-51 | -1.69E-46 |
| MS.gene059536 | MS.gene54561 | 0.860439 | 2.06E-63 | -1.69E-46 |
| MS.gene059677 | MS.gene54561 | 0.896554 | 3.30E-76 | -1.69E-46 |
| MS.gene059688 | MS.gene54561 | 0.808346 | 3.24E-50 | -1.69E-46 |
| MS.gene059692 | MS.gene54561 | 0.802894 | 4.52E-49 | -1.69E-46 |
| MS.gene059695 | MS.gene54561 | 0.808372 | 3.20E-50 | -1.69E-46 |
| MS.gene059711 | MS.gene54561 | 0.822208 | 2.68E-53 | -1.69E-46 |
| MS.gene059718 | MS.gene54561 | 0.902597 | 8.24E-79 | -1.69E-46 |
| MS.gene059756 | MS.gene54561 | 0.865756 | 4.69E-65 | -1.69E-46 |
| MS.gene059801 | MS.gene54561 | 0.823581 | 1.28E-53 | -1.69E-46 |
| MS.gene059858 | MS.gene54561 | 0.814401 | 1.57E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene54561 | 0.847106 | 1.43E-59 | -1.69E-46 |
| MS.gene059902 | MS.gene54561 | 0.852068 | 5.88E-61 | -1.69E-46 |
| MS.gene059960 | MS.gene54561 | 0.888207 | 7.24E-73 | -1.69E-46 |
| MS.gene060193 | MS.gene54561 | 0.843713 | 1.18E-58 | -1.69E-46 |
| MS.gene060341 | MS.gene54561 | 0.830983 | 2.16E-55 | -1.69E-46 |
| MS.gene060356 | MS.gene54561 | 0.852181 | 5.46E-61 | -1.69E-46 |
| MS.gene060403 | MS.gene54561 | 0.801073 | 1.07E-48 | -1.69E-46 |
| MS.gene060482 | MS.gene54561 | 0.852597 | 4.16E-61 | -1.69E-46 |
| MS.gene060703 | MS.gene54561 | 0.831035 | 2.10E-55 | -1.69E-46 |
| MS.gene060727 | MS.gene54561 | 0.83528 | 1.84E-56 | -1.69E-46 |
| MS.gene060728 | MS.gene54561 | 0.846656 | 1.89E-59 | -1.69E-46 |
| MS.gene060762 | MS.gene54561 | 0.844472 | 7.40E-59 | -1.69E-46 |
| MS.gene06077 | MS.gene54561 | 0.854367 | 1.29E-61 | -1.69E-46 |
| MS.gene060804 | MS.gene54561 | 0.868804 | 4.97E-66 | -1.69E-46 |
| MS.gene060818 | MS.gene54561 | 0.85192 | 6.48E-61 | -1.69E-46 |
| MS.gene060835 | MS.gene54561 | 0.837761 | 4.29E-57 | -1.69E-46 |
| MS.gene060837 | MS.gene54561 | 0.823176 | 1.60E-53 | -1.69E-46 |
| MS.gene06092 | MS.gene54561 | 0.868724 | 5.28E-66 | -1.69E-46 |
| MS.gene060982 | MS.gene54561 | 0.818592 | 1.81E-52 | -1.69E-46 |
| MS.gene061041 | MS.gene54561 | 0.827479 | 1.53E-54 | -1.69E-46 |
| MS.gene061134 | MS.gene54561 | 0.844322 | 8.12E-59 | -1.69E-46 |
| MS.gene061150 | MS.gene54561 | 0.896037 | 5.42E-76 | -1.69E-46 |
| MS.gene061171 | MS.gene54561 | 0.848303 | 6.68E-60 | -1.69E-46 |
| MS.gene061200 | MS.gene54561 | 0.923941 | 1.37E-89 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54561.t1 | MTR_4g067150 | 97.727 | 264 | 6 | 0 | 1 | 264 | 1 | 264 | 0.0 | 529 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54561.t1 | AT3G59400 | 60.847 | 189 | 67 | 3 | 79 | 264 | 81 | 265 | 2.05e-75 | 230 |
Find 64 sgRNAs with CRISPR-Local
Find 71 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTGTTAAATAATTTCTTT+TGG | 0.283862 | 4.3:-37229508 | None:intergenic |
| GGTTATGTTGGTGGGGTTGA+TGG | 0.305251 | 4.3:-37229183 | None:intergenic |
| TTGTCTCTTCATCGGCTTCT+CGG | 0.317241 | 4.3:-37229337 | None:intergenic |
| TTGGTGGGGTTGATGGTAGT+TGG | 0.324435 | 4.3:-37229176 | None:intergenic |
| GTCAGAGGTAAATGACCTTC+TGG | 0.364131 | 4.3:-37229656 | None:intergenic |
| ATGGTGTGGATGATGTTGTT+TGG | 0.368599 | 4.3:-37229253 | None:intergenic |
| GACCATAGTGACAACAAGTT+TGG | 0.377134 | 4.3:+37229476 | MS.gene54561:CDS |
| GACGAAGTTGAAGTTTCATT+TGG | 0.378588 | 4.3:+37229746 | MS.gene54561:CDS |
| AGAAAATGTGACAGAGGAGT+TGG | 0.387476 | 4.3:-37229225 | None:intergenic |
| TTGAATTGAGTGAAGAGAAT+TGG | 0.413727 | 4.3:-37229072 | None:intergenic |
| TTTGGTGGCACTGAGGGAAA+TGG | 0.415272 | 4.3:+37229764 | MS.gene54561:CDS |
| TGGTGTGGATGATGTTGTTT+GGG | 0.423170 | 4.3:-37229252 | None:intergenic |
| TGGAAGAGGAAGAGTGGGAA+AGG | 0.433263 | 4.3:-37229205 | None:intergenic |
| AGGAGTTGGAAGAGGAAGAG+TGG | 0.435674 | 4.3:-37229211 | None:intergenic |
| TCAAAACAATTGACCAGCTC+TGG | 0.440096 | 4.3:+37229450 | MS.gene54561:CDS |
| ATCCAAACTTGTTGTCACTA+TGG | 0.441920 | 4.3:-37229478 | None:intergenic |
| GGTTGATGGTAGTTGGTTTG+AGG | 0.455669 | 4.3:-37229169 | None:intergenic |
| TCTGAGCTGCTTCGCCTGCT+AGG | 0.457028 | 4.3:-37229376 | None:intergenic |
| GGAGTTGGAAGAGGAAGAGT+GGG | 0.459383 | 4.3:-37229210 | None:intergenic |
| CTGGAGGAGTTCAAAGGAGC+TGG | 0.460854 | 4.3:-37229291 | None:intergenic |
| ATGAAACTTCAACTTCGTCT+TGG | 0.463961 | 4.3:-37229742 | None:intergenic |
| CGTCTTCTCATCGTCCTAGC+AGG | 0.467340 | 4.3:+37229362 | MS.gene54561:CDS |
| CACTATGGTCTCTCCAGAGC+TGG | 0.482449 | 4.3:-37229463 | None:intergenic |
| CTTCACCAAGTTCTTCATCA+AGG | 0.483845 | 4.3:+37229541 | MS.gene54561:CDS |
| GTGGGAAAGGGTTATGTTGG+TGG | 0.485083 | 4.3:-37229192 | None:intergenic |
| GTTTCATTTGGTGGCACTGA+GGG | 0.487844 | 4.3:+37229758 | MS.gene54561:CDS |
| TGTGACAGAGGAGTTGGAAG+AGG | 0.488011 | 4.3:-37229219 | None:intergenic |
| ACCAAGTTCTTCATCAAGGT+TGG | 0.494609 | 4.3:+37229545 | MS.gene54561:CDS |
| AAAAGATTCATCAAAACCAT+TGG | 0.496372 | 4.3:+37229802 | MS.gene54561:CDS |
| AGTTCTTCATCAAGGTTGGT+TGG | 0.506590 | 4.3:+37229549 | MS.gene54561:CDS |
| TCTTGGACTGCATCAAAAGC+TGG | 0.506697 | 4.3:-37229725 | None:intergenic |
| GGAAGAGGAAGAGTGGGAAA+GGG | 0.507715 | 4.3:-37229204 | None:intergenic |
| GGCGAAGCAGCTCAGAAGCG+TGG | 0.511684 | 4.3:+37229383 | MS.gene54561:CDS |
| CTGGTTTGAGAGGTTGATGA+TGG | 0.511778 | 4.3:-37229272 | None:intergenic |
| AAGACGTCTTGTCTCTTCAT+CGG | 0.512265 | 4.3:-37229345 | None:intergenic |
| AGATGGAACAATATAACTAT+AGG | 0.512780 | 4.3:+37229591 | MS.gene54561:CDS |
| TTGAAGATCTTGGTAGCCAA+TGG | 0.513830 | 4.3:-37229818 | None:intergenic |
| TGGGAAAGGGTTATGTTGGT+GGG | 0.515839 | 4.3:-37229191 | None:intergenic |
| AGAGTGGGAAAGGGTTATGT+TGG | 0.523394 | 4.3:-37229195 | None:intergenic |
| TTCAAAGGAGCTGGTTTGAG+AGG | 0.533319 | 4.3:-37229282 | None:intergenic |
| GAAGTTGAAGTTTCATTTGG+TGG | 0.538306 | 4.3:+37229749 | MS.gene54561:CDS |
| ACCAACCTTGATGAAGAACT+TGG | 0.545583 | 4.3:-37229546 | None:intergenic |
| CCAAAAGAAATTATTTAACA+AGG | 0.554192 | 4.3:+37229508 | MS.gene54561:CDS |
| TTGAGAGGTTGATGATGGTG+TGG | 0.562770 | 4.3:-37229267 | None:intergenic |
| CAGTTTCAGAAGGGTAGTAG+TGG | 0.564931 | 4.3:-37229115 | None:intergenic |
| GGGAAAGGGTTATGTTGGTG+GGG | 0.565442 | 4.3:-37229190 | None:intergenic |
| AGTGAGGATGAAAGTGTGGA+TGG | 0.569347 | 4.3:-37229143 | None:intergenic |
| TGGCTGAGAGATGCTGCTGG+AGG | 0.581059 | 4.3:-37229307 | None:intergenic |
| GAAGAAGCTTGACACTGAGA+TGG | 0.583534 | 4.3:+37229574 | MS.gene54561:CDS |
| GGAGATAGAAAATGTGACAG+AGG | 0.591660 | 4.3:-37229231 | None:intergenic |
| GATGGAGGAGCAGTTTCAGA+AGG | 0.592373 | 4.3:-37229125 | None:intergenic |
| GAGGGAAATGGAGCACTCAA+AGG | 0.594924 | 4.3:+37229776 | MS.gene54561:CDS |
| AATTGAGTGAAGAGAATTGG+TGG | 0.601375 | 4.3:-37229069 | None:intergenic |
| GAGGATGAAAGTGTGGATGG+AGG | 0.603905 | 4.3:-37229140 | None:intergenic |
| CCTCTGAGTGCATTTGTCAG+AGG | 0.605940 | 4.3:-37229671 | None:intergenic |
| ATGCTGCTGGAGGAGTTCAA+AGG | 0.611446 | 4.3:-37229297 | None:intergenic |
| GGACTGCATCAAAAGCTGGA+TGG | 0.636421 | 4.3:-37229721 | None:intergenic |
| GAAAAGTGAGGATGAAAGTG+TGG | 0.636789 | 4.3:-37229147 | None:intergenic |
| AGCTCCCATATAAACTCTGT+AGG | 0.639673 | 4.3:-37229620 | None:intergenic |
| CTCAATGATGACACTCCAGA+AGG | 0.645146 | 4.3:+37229641 | MS.gene54561:CDS |
| ATGGAGGAGCAGTTTCAGAA+GGG | 0.648881 | 4.3:-37229124 | None:intergenic |
| AGTTGGTTTGAGGAAAAGTG+AGG | 0.684896 | 4.3:-37229159 | None:intergenic |
| AGTTTCATTTGGTGGCACTG+AGG | 0.701247 | 4.3:+37229757 | MS.gene54561:CDS |
| CCTCTGACAAATGCACTCAG+AGG | 0.721539 | 4.3:+37229671 | MS.gene54561:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CCAAAAGAAATTATTTAACA+AGG | + | chr4.3:37229508-37229527 | MS.gene54561:CDS | 20.0% |
| !!! | CCTTGTTAAATAATTTCTTT+TGG | - | chr4.3:37229511-37229530 | None:intergenic | 20.0% |
| ! | AAAAGATTCATCAAAACCAT+TGG | + | chr4.3:37229802-37229821 | MS.gene54561:CDS | 25.0% |
| ! | AGATGGAACAATATAACTAT+AGG | + | chr4.3:37229591-37229610 | MS.gene54561:CDS | 25.0% |
| !! | TTTTCCTACAGAGTTTATAT+GGG | + | chr4.3:37229616-37229635 | MS.gene54561:CDS | 25.0% |
| TTGAATTGAGTGAAGAGAAT+TGG | - | chr4.3:37229075-37229094 | None:intergenic | 30.0% | |
| ! | CTTTTCCTACAGAGTTTATA+TGG | + | chr4.3:37229615-37229634 | MS.gene54561:CDS | 30.0% |
| !!! | ATAGTCTGTTTTGAAGATCT+TGG | - | chr4.3:37229831-37229850 | None:intergenic | 30.0% |
| AATTGAGTGAAGAGAATTGG+TGG | - | chr4.3:37229072-37229091 | None:intergenic | 35.0% | |
| ATGAAACTTCAACTTCGTCT+TGG | - | chr4.3:37229745-37229764 | None:intergenic | 35.0% | |
| GAAGTTGAAGTTTCATTTGG+TGG | + | chr4.3:37229749-37229768 | MS.gene54561:CDS | 35.0% | |
| GACGAAGTTGAAGTTTCATT+TGG | + | chr4.3:37229746-37229765 | MS.gene54561:CDS | 35.0% | |
| !! | ATCCAAACTTGTTGTCACTA+TGG | - | chr4.3:37229481-37229500 | None:intergenic | 35.0% |
| AAGACGTCTTGTCTCTTCAT+CGG | - | chr4.3:37229348-37229367 | None:intergenic | 40.0% | |
| ACCAACCTTGATGAAGAACT+TGG | - | chr4.3:37229549-37229568 | None:intergenic | 40.0% | |
| ACCAAGTTCTTCATCAAGGT+TGG | + | chr4.3:37229545-37229564 | MS.gene54561:CDS | 40.0% | |
| AGAAAATGTGACAGAGGAGT+TGG | - | chr4.3:37229228-37229247 | None:intergenic | 40.0% | |
| AGCTCCCATATAAACTCTGT+AGG | - | chr4.3:37229623-37229642 | None:intergenic | 40.0% | |
| ATGGTGTGGATGATGTTGTT+TGG | - | chr4.3:37229256-37229275 | None:intergenic | 40.0% | |
| CTTCACCAAGTTCTTCATCA+AGG | + | chr4.3:37229541-37229560 | MS.gene54561:CDS | 40.0% | |
| GAAAAGTGAGGATGAAAGTG+TGG | - | chr4.3:37229150-37229169 | None:intergenic | 40.0% | |
| GACCATAGTGACAACAAGTT+TGG | + | chr4.3:37229476-37229495 | MS.gene54561:CDS | 40.0% | |
| GGAGATAGAAAATGTGACAG+AGG | - | chr4.3:37229234-37229253 | None:intergenic | 40.0% | |
| TCAAAACAATTGACCAGCTC+TGG | + | chr4.3:37229450-37229469 | MS.gene54561:CDS | 40.0% | |
| ! | AGTTCTTCATCAAGGTTGGT+TGG | + | chr4.3:37229549-37229568 | MS.gene54561:CDS | 40.0% |
| ! | TGGCTATGTTTTCTTCTCAG+AGG | + | chr4.3:37229403-37229422 | MS.gene54561:CDS | 40.0% |
| ! | TGGTGTGGATGATGTTGTTT+GGG | - | chr4.3:37229255-37229274 | None:intergenic | 40.0% |
| ! | TTGAAGATCTTGGTAGCCAA+TGG | - | chr4.3:37229821-37229840 | None:intergenic | 40.0% |
| !! | AGAGCTGGTCAATTGTTTTG+AGG | - | chr4.3:37229451-37229470 | None:intergenic | 40.0% |
| !! | AGTTGGTTTGAGGAAAAGTG+AGG | - | chr4.3:37229162-37229181 | None:intergenic | 40.0% |
| AGAGTGGGAAAGGGTTATGT+TGG | - | chr4.3:37229198-37229217 | None:intergenic | 45.0% | |
| ATGGAGGAGCAGTTTCAGAA+GGG | - | chr4.3:37229127-37229146 | None:intergenic | 45.0% | |
| CAGTTTCAGAAGGGTAGTAG+TGG | - | chr4.3:37229118-37229137 | None:intergenic | 45.0% | |
| CTCAATGATGACACTCCAGA+AGG | + | chr4.3:37229641-37229660 | MS.gene54561:CDS | 45.0% | |
| GAAGAAGCTTGACACTGAGA+TGG | + | chr4.3:37229574-37229593 | MS.gene54561:CDS | 45.0% | |
| GTCAGAGGTAAATGACCTTC+TGG | - | chr4.3:37229659-37229678 | None:intergenic | 45.0% | |
| TCTTGGACTGCATCAAAAGC+TGG | - | chr4.3:37229728-37229747 | None:intergenic | 45.0% | |
| TGGGAAAGGGTTATGTTGGT+GGG | - | chr4.3:37229194-37229213 | None:intergenic | 45.0% | |
| ! | AGTGAGGATGAAAGTGTGGA+TGG | - | chr4.3:37229146-37229165 | None:intergenic | 45.0% |
| ! | AGTTTCATTTGGTGGCACTG+AGG | + | chr4.3:37229757-37229776 | MS.gene54561:CDS | 45.0% |
| ! | GTTTCATTTGGTGGCACTGA+GGG | + | chr4.3:37229758-37229777 | MS.gene54561:CDS | 45.0% |
| !! | ATCGGCTTCTCGGAAGTTTT+TGG | - | chr4.3:37229330-37229349 | None:intergenic | 45.0% |
| !! | CTGGTTTGAGAGGTTGATGA+TGG | - | chr4.3:37229275-37229294 | None:intergenic | 45.0% |
| !! | GGTTGATGGTAGTTGGTTTG+AGG | - | chr4.3:37229172-37229191 | None:intergenic | 45.0% |
| !! | TTCAAAGGAGCTGGTTTGAG+AGG | - | chr4.3:37229285-37229304 | None:intergenic | 45.0% |
| !! | TTGAGAGGTTGATGATGGTG+TGG | - | chr4.3:37229270-37229289 | None:intergenic | 45.0% |
| !! | TTGTCTCTTCATCGGCTTCT+CGG | - | chr4.3:37229340-37229359 | None:intergenic | 45.0% |
| AGGAGTTGGAAGAGGAAGAG+TGG | - | chr4.3:37229214-37229233 | None:intergenic | 50.0% | |
| ATGCTGCTGGAGGAGTTCAA+AGG | - | chr4.3:37229300-37229319 | None:intergenic | 50.0% | |
| CCTCTGACAAATGCACTCAG+AGG | + | chr4.3:37229671-37229690 | MS.gene54561:CDS | 50.0% | |
| CCTCTGAGTGCATTTGTCAG+AGG | - | chr4.3:37229674-37229693 | None:intergenic | 50.0% | |
| GATGGAGGAGCAGTTTCAGA+AGG | - | chr4.3:37229128-37229147 | None:intergenic | 50.0% | |
| GGAAGAGGAAGAGTGGGAAA+GGG | - | chr4.3:37229207-37229226 | None:intergenic | 50.0% | |
| GGACTGCATCAAAAGCTGGA+TGG | - | chr4.3:37229724-37229743 | None:intergenic | 50.0% | |
| GGAGTTGGAAGAGGAAGAGT+GGG | - | chr4.3:37229213-37229232 | None:intergenic | 50.0% | |
| GGGAAAGGGTTATGTTGGTG+GGG | - | chr4.3:37229193-37229212 | None:intergenic | 50.0% | |
| GTGGGAAAGGGTTATGTTGG+TGG | - | chr4.3:37229195-37229214 | None:intergenic | 50.0% | |
| TGGAAGAGGAAGAGTGGGAA+AGG | - | chr4.3:37229208-37229227 | None:intergenic | 50.0% | |
| TGTGACAGAGGAGTTGGAAG+AGG | - | chr4.3:37229222-37229241 | None:intergenic | 50.0% | |
| ! | GAGGATGAAAGTGTGGATGG+AGG | - | chr4.3:37229143-37229162 | None:intergenic | 50.0% |
| ! | GAGGGAAATGGAGCACTCAA+AGG | + | chr4.3:37229776-37229795 | MS.gene54561:CDS | 50.0% |
| ! | GGTTATGTTGGTGGGGTTGA+TGG | - | chr4.3:37229186-37229205 | None:intergenic | 50.0% |
| ! | TTTGGTGGCACTGAGGGAAA+TGG | + | chr4.3:37229764-37229783 | MS.gene54561:CDS | 50.0% |
| !! | TTGGTGGGGTTGATGGTAGT+TGG | - | chr4.3:37229179-37229198 | None:intergenic | 50.0% |
| !! | TTTTGGCTGAGAGATGCTGC+TGG | - | chr4.3:37229313-37229332 | None:intergenic | 50.0% |
| CACTATGGTCTCTCCAGAGC+TGG | - | chr4.3:37229466-37229485 | None:intergenic | 55.0% | |
| CGTCTTCTCATCGTCCTAGC+AGG | + | chr4.3:37229362-37229381 | MS.gene54561:CDS | 55.0% | |
| CTGGAGGAGTTCAAAGGAGC+TGG | - | chr4.3:37229294-37229313 | None:intergenic | 55.0% | |
| TCTGAGCTGCTTCGCCTGCT+AGG | - | chr4.3:37229379-37229398 | None:intergenic | 60.0% | |
| TGGCTGAGAGATGCTGCTGG+AGG | - | chr4.3:37229310-37229329 | None:intergenic | 60.0% | |
| GGCGAAGCAGCTCAGAAGCG+TGG | + | chr4.3:37229383-37229402 | MS.gene54561:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 37229065 | 37229859 | 37229065 | ID=MS.gene54561 |
| chr4.3 | mRNA | 37229065 | 37229859 | 37229065 | ID=MS.gene54561.t1;Parent=MS.gene54561 |
| chr4.3 | exon | 37229065 | 37229859 | 37229065 | ID=MS.gene54561.t1.exon1;Parent=MS.gene54561.t1 |
| chr4.3 | CDS | 37229065 | 37229859 | 37229065 | ID=cds.MS.gene54561.t1;Parent=MS.gene54561.t1 |
| Gene Sequence |
| Protein sequence |
