Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72106.t1 | AES90988.2 | 96.6 | 297 | 10 | 0 | 12 | 308 | 24 | 320 | 1.70E-159 | 572 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72106.t1 | Q9XJ36 | 64.9 | 285 | 94 | 4 | 24 | 308 | 1 | 279 | 2.0e-100 | 367.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72106.t1 | G7JK76 | 96.6 | 297 | 10 | 0 | 12 | 308 | 24 | 320 | 1.2e-159 | 572.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene72106 | 0.847401 | 1.18E-59 | -1.69E-46 |
| MS.gene049171 | MS.gene72106 | 0.909479 | 5.44E-82 | -1.69E-46 |
| MS.gene049173 | MS.gene72106 | 0.813615 | 2.34E-51 | -1.69E-46 |
| MS.gene049217 | MS.gene72106 | 0.869657 | 2.63E-66 | -1.69E-46 |
| MS.gene049222 | MS.gene72106 | 0.905094 | 6.17E-80 | -1.69E-46 |
| MS.gene049232 | MS.gene72106 | 0.844558 | 7.02E-59 | -1.69E-46 |
| MS.gene049285 | MS.gene72106 | 0.910924 | 1.09E-82 | -1.69E-46 |
| MS.gene049320 | MS.gene72106 | 0.907095 | 7.33E-81 | -1.69E-46 |
| MS.gene04939 | MS.gene72106 | 0.811348 | 7.32E-51 | -1.69E-46 |
| MS.gene049609 | MS.gene72106 | 0.859652 | 3.57E-63 | -1.69E-46 |
| MS.gene049615 | MS.gene72106 | 0.852102 | 5.75E-61 | -1.69E-46 |
| MS.gene049627 | MS.gene72106 | 0.894956 | 1.51E-75 | -1.69E-46 |
| MS.gene049633 | MS.gene72106 | 0.84481 | 6.00E-59 | -1.69E-46 |
| MS.gene049657 | MS.gene72106 | 0.803082 | 4.13E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene72106 | 0.834716 | 2.55E-56 | -1.69E-46 |
| MS.gene049865 | MS.gene72106 | 0.808231 | 3.43E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene72106 | 0.87859 | 2.48E-69 | -1.69E-46 |
| MS.gene050163 | MS.gene72106 | 0.917118 | 7.84E-86 | -1.69E-46 |
| MS.gene050165 | MS.gene72106 | 0.909684 | 4.34E-82 | -1.69E-46 |
| MS.gene050170 | MS.gene72106 | 0.873134 | 1.86E-67 | -1.69E-46 |
| MS.gene050323 | MS.gene72106 | 0.85595 | 4.47E-62 | -1.69E-46 |
| MS.gene050333 | MS.gene72106 | 0.872134 | 4.02E-67 | -1.69E-46 |
| MS.gene050444 | MS.gene72106 | 0.838609 | 2.60E-57 | -1.69E-46 |
| MS.gene050496 | MS.gene72106 | 0.846635 | 1.92E-59 | -1.69E-46 |
| MS.gene050504 | MS.gene72106 | 0.919738 | 3.09E-87 | -1.69E-46 |
| MS.gene050518 | MS.gene72106 | 0.919281 | 5.47E-87 | -1.69E-46 |
| MS.gene050538 | MS.gene72106 | 0.836744 | 7.82E-57 | -1.69E-46 |
| MS.gene050577 | MS.gene72106 | 0.917655 | 4.07E-86 | -1.69E-46 |
| MS.gene050593 | MS.gene72106 | 0.820573 | 6.39E-53 | -1.69E-46 |
| MS.gene050612 | MS.gene72106 | 0.904824 | 8.19E-80 | -1.69E-46 |
| MS.gene050675 | MS.gene72106 | 0.87444 | 6.74E-68 | -1.69E-46 |
| MS.gene050699 | MS.gene72106 | 0.911618 | 4.96E-83 | -1.69E-46 |
| MS.gene050747 | MS.gene72106 | 0.867642 | 1.18E-65 | -1.69E-46 |
| MS.gene050772 | MS.gene72106 | 0.878338 | 3.04E-69 | -1.69E-46 |
| MS.gene050781 | MS.gene72106 | 0.821132 | 4.75E-53 | -1.69E-46 |
| MS.gene05080 | MS.gene72106 | 0.842958 | 1.88E-58 | -1.69E-46 |
| MS.gene050868 | MS.gene72106 | 0.862083 | 6.51E-64 | -1.69E-46 |
| MS.gene050871 | MS.gene72106 | 0.85919 | 4.91E-63 | -1.69E-46 |
| MS.gene050876 | MS.gene72106 | 0.878422 | 2.84E-69 | -1.69E-46 |
| MS.gene05087 | MS.gene72106 | 0.852144 | 5.60E-61 | -1.69E-46 |
| MS.gene050883 | MS.gene72106 | -0.810042 | 1.40E-50 | -1.69E-46 |
| MS.gene050904 | MS.gene72106 | 0.889338 | 2.65E-73 | -1.69E-46 |
| MS.gene050950 | MS.gene72106 | 0.862513 | 4.81E-64 | -1.69E-46 |
| MS.gene050986 | MS.gene72106 | 0.89033 | 1.09E-73 | -1.69E-46 |
| MS.gene05100 | MS.gene72106 | 0.888665 | 4.83E-73 | -1.69E-46 |
| MS.gene051268 | MS.gene72106 | 0.813314 | 2.72E-51 | -1.69E-46 |
| MS.gene051317 | MS.gene72106 | 0.895845 | 6.50E-76 | -1.69E-46 |
| MS.gene051336 | MS.gene72106 | 0.801672 | 8.06E-49 | -1.69E-46 |
| MS.gene051364 | MS.gene72106 | -0.831412 | 1.69E-55 | -1.69E-46 |
| MS.gene051366 | MS.gene72106 | -0.826487 | 2.64E-54 | -1.69E-46 |
| MS.gene051367 | MS.gene72106 | -0.803679 | 3.11E-49 | -1.69E-46 |
| MS.gene051551 | MS.gene72106 | 0.871187 | 8.27E-67 | -1.69E-46 |
| MS.gene051666 | MS.gene72106 | 0.856125 | 3.98E-62 | -1.69E-46 |
| MS.gene051694 | MS.gene72106 | 0.860345 | 2.20E-63 | -1.69E-46 |
| MS.gene051810 | MS.gene72106 | 0.835526 | 1.59E-56 | -1.69E-46 |
| MS.gene051838 | MS.gene72106 | 0.808467 | 3.05E-50 | -1.69E-46 |
| MS.gene051858 | MS.gene72106 | 0.836012 | 1.20E-56 | -1.69E-46 |
| MS.gene051949 | MS.gene72106 | 0.83335 | 5.61E-56 | -1.69E-46 |
| MS.gene052164 | MS.gene72106 | 0.869105 | 3.97E-66 | -1.69E-46 |
| MS.gene052482 | MS.gene72106 | 0.87246 | 3.13E-67 | -1.69E-46 |
| MS.gene052486 | MS.gene72106 | 0.885396 | 8.43E-72 | -1.69E-46 |
| MS.gene052501 | MS.gene72106 | 0.80066 | 1.30E-48 | -1.69E-46 |
| MS.gene052503 | MS.gene72106 | 0.865188 | 7.08E-65 | -1.69E-46 |
| MS.gene052504 | MS.gene72106 | 0.830438 | 2.94E-55 | -1.69E-46 |
| MS.gene052506 | MS.gene72106 | 0.853182 | 2.83E-61 | -1.69E-46 |
| MS.gene052605 | MS.gene72106 | 0.806938 | 6.45E-50 | -1.69E-46 |
| MS.gene052606 | MS.gene72106 | -0.80694 | 6.44E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene72106 | 0.848132 | 7.45E-60 | -1.69E-46 |
| MS.gene052670 | MS.gene72106 | 0.80839 | 3.17E-50 | -1.69E-46 |
| MS.gene052820 | MS.gene72106 | 0.826035 | 3.38E-54 | -1.69E-46 |
| MS.gene052822 | MS.gene72106 | 0.858423 | 8.32E-63 | -1.69E-46 |
| MS.gene052823 | MS.gene72106 | 0.860375 | 2.16E-63 | -1.69E-46 |
| MS.gene052825 | MS.gene72106 | 0.860416 | 2.10E-63 | -1.69E-46 |
| MS.gene052916 | MS.gene72106 | 0.816263 | 6.05E-52 | -1.69E-46 |
| MS.gene052966 | MS.gene72106 | 0.865425 | 5.96E-65 | -1.69E-46 |
| MS.gene053117 | MS.gene72106 | 0.811124 | 8.19E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene72106 | 0.890172 | 1.25E-73 | -1.69E-46 |
| MS.gene053207 | MS.gene72106 | 0.839889 | 1.21E-57 | -1.69E-46 |
| MS.gene053213 | MS.gene72106 | 0.893139 | 8.30E-75 | -1.69E-46 |
| MS.gene053284 | MS.gene72106 | 0.832611 | 8.57E-56 | -1.69E-46 |
| MS.gene053285 | MS.gene72106 | 0.820845 | 5.53E-53 | -1.69E-46 |
| MS.gene053286 | MS.gene72106 | 0.890708 | 7.72E-74 | -1.69E-46 |
| MS.gene053421 | MS.gene72106 | -0.825575 | 4.35E-54 | -1.69E-46 |
| MS.gene053436 | MS.gene72106 | 0.859719 | 3.40E-63 | -1.69E-46 |
| MS.gene053479 | MS.gene72106 | 0.845788 | 3.26E-59 | -1.69E-46 |
| MS.gene053480 | MS.gene72106 | 0.845513 | 3.87E-59 | -1.69E-46 |
| MS.gene053549 | MS.gene72106 | -0.810507 | 1.11E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene72106 | 0.851718 | 7.39E-61 | -1.69E-46 |
| MS.gene053579 | MS.gene72106 | 0.815388 | 9.49E-52 | -1.69E-46 |
| MS.gene053626 | MS.gene72106 | 0.836283 | 1.02E-56 | -1.69E-46 |
| MS.gene053632 | MS.gene72106 | 0.864005 | 1.66E-64 | -1.69E-46 |
| MS.gene053633 | MS.gene72106 | 0.80391 | 2.78E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene72106 | 0.849793 | 2.57E-60 | -1.69E-46 |
| MS.gene053916 | MS.gene72106 | 0.830778 | 2.42E-55 | -1.69E-46 |
| MS.gene054003 | MS.gene72106 | 0.805894 | 1.07E-49 | -1.69E-46 |
| MS.gene054408 | MS.gene72106 | 0.846637 | 1.92E-59 | -1.69E-46 |
| MS.gene054595 | MS.gene72106 | 0.866222 | 3.34E-65 | -1.69E-46 |
| MS.gene054600 | MS.gene72106 | 0.88333 | 4.92E-71 | -1.69E-46 |
| MS.gene054638 | MS.gene72106 | 0.805842 | 1.10E-49 | -1.69E-46 |
| MS.gene054642 | MS.gene72106 | 0.886603 | 2.96E-72 | -1.69E-46 |
| MS.gene054706 | MS.gene72106 | -0.814664 | 1.37E-51 | -1.69E-46 |
| MS.gene05470 | MS.gene72106 | 0.907036 | 7.82E-81 | -1.69E-46 |
| MS.gene054927 | MS.gene72106 | 0.820686 | 6.02E-53 | -1.69E-46 |
| MS.gene054954 | MS.gene72106 | 0.903708 | 2.62E-79 | -1.69E-46 |
| MS.gene055154 | MS.gene72106 | -0.803862 | 2.85E-49 | -1.69E-46 |
| MS.gene055206 | MS.gene72106 | 0.833157 | 6.27E-56 | -1.69E-46 |
| MS.gene055224 | MS.gene72106 | 0.817604 | 3.03E-52 | -1.69E-46 |
| MS.gene055289 | MS.gene72106 | 0.805561 | 1.26E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene72106 | 0.914436 | 1.92E-84 | -1.69E-46 |
| MS.gene055502 | MS.gene72106 | 0.903218 | 4.35E-79 | -1.69E-46 |
| MS.gene055577 | MS.gene72106 | 0.909191 | 7.48E-82 | -1.69E-46 |
| MS.gene055638 | MS.gene72106 | 0.800236 | 1.58E-48 | -1.69E-46 |
| MS.gene055647 | MS.gene72106 | 0.805272 | 1.45E-49 | -1.69E-46 |
| MS.gene055722 | MS.gene72106 | 0.826592 | 2.49E-54 | -1.69E-46 |
| MS.gene055748 | MS.gene72106 | 0.890538 | 9.00E-74 | -1.69E-46 |
| MS.gene055750 | MS.gene72106 | 0.881859 | 1.69E-70 | -1.69E-46 |
| MS.gene055751 | MS.gene72106 | 0.887556 | 1.29E-72 | -1.69E-46 |
| MS.gene055776 | MS.gene72106 | 0.838763 | 2.37E-57 | -1.69E-46 |
| MS.gene055849 | MS.gene72106 | 0.838713 | 2.44E-57 | -1.69E-46 |
| MS.gene05589 | MS.gene72106 | 0.867003 | 1.88E-65 | -1.69E-46 |
| MS.gene055941 | MS.gene72106 | 0.862546 | 4.69E-64 | -1.69E-46 |
| MS.gene056040 | MS.gene72106 | 0.823577 | 1.29E-53 | -1.69E-46 |
| MS.gene056046 | MS.gene72106 | 0.813073 | 3.08E-51 | -1.69E-46 |
| MS.gene056083 | MS.gene72106 | 0.836198 | 1.08E-56 | -1.69E-46 |
| MS.gene056374 | MS.gene72106 | 0.865739 | 4.75E-65 | -1.69E-46 |
| MS.gene056409 | MS.gene72106 | 0.846772 | 1.76E-59 | -1.69E-46 |
| MS.gene056450 | MS.gene72106 | 0.830834 | 2.35E-55 | -1.69E-46 |
| MS.gene056504 | MS.gene72106 | 0.896975 | 2.20E-76 | -1.69E-46 |
| MS.gene056510 | MS.gene72106 | 0.888557 | 5.31E-73 | -1.69E-46 |
| MS.gene056549 | MS.gene72106 | 0.833726 | 4.52E-56 | -1.69E-46 |
| MS.gene056550 | MS.gene72106 | -0.832435 | 9.47E-56 | -1.69E-46 |
| MS.gene056610 | MS.gene72106 | 0.8803 | 6.15E-70 | -1.69E-46 |
| MS.gene056657 | MS.gene72106 | 0.894311 | 2.78E-75 | -1.69E-46 |
| MS.gene05666 | MS.gene72106 | 0.801296 | 9.63E-49 | -1.69E-46 |
| MS.gene056692 | MS.gene72106 | 0.905571 | 3.73E-80 | -1.69E-46 |
| MS.gene056878 | MS.gene72106 | 0.805465 | 1.32E-49 | -1.69E-46 |
| MS.gene056898 | MS.gene72106 | 0.822869 | 1.88E-53 | -1.69E-46 |
| MS.gene057129 | MS.gene72106 | 0.813601 | 2.36E-51 | -1.69E-46 |
| MS.gene057331 | MS.gene72106 | 0.820135 | 8.05E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene72106 | 0.869726 | 2.50E-66 | -1.69E-46 |
| MS.gene057658 | MS.gene72106 | 0.875192 | 3.74E-68 | -1.69E-46 |
| MS.gene057831 | MS.gene72106 | 0.908367 | 1.85E-81 | -1.69E-46 |
| MS.gene057857 | MS.gene72106 | 0.803659 | 3.14E-49 | -1.69E-46 |
| MS.gene05787 | MS.gene72106 | 0.821179 | 4.63E-53 | -1.69E-46 |
| MS.gene057986 | MS.gene72106 | 0.829073 | 6.31E-55 | -1.69E-46 |
| MS.gene058019 | MS.gene72106 | 0.835854 | 1.32E-56 | -1.69E-46 |
| MS.gene058111 | MS.gene72106 | -0.80751 | 4.88E-50 | -1.69E-46 |
| MS.gene058334 | MS.gene72106 | -0.860122 | 2.57E-63 | -1.69E-46 |
| MS.gene058335 | MS.gene72106 | 0.808135 | 3.59E-50 | -1.69E-46 |
| MS.gene058338 | MS.gene72106 | 0.812782 | 3.57E-51 | -1.69E-46 |
| MS.gene05837 | MS.gene72106 | 0.869541 | 2.87E-66 | -1.69E-46 |
| MS.gene058419 | MS.gene72106 | 0.912096 | 2.88E-83 | -1.69E-46 |
| MS.gene058544 | MS.gene72106 | 0.89478 | 1.79E-75 | -1.69E-46 |
| MS.gene058719 | MS.gene72106 | 0.814792 | 1.29E-51 | -1.69E-46 |
| MS.gene058723 | MS.gene72106 | 0.825905 | 3.63E-54 | -1.69E-46 |
| MS.gene058773 | MS.gene72106 | 0.894334 | 2.72E-75 | -1.69E-46 |
| MS.gene058838 | MS.gene72106 | 0.880833 | 3.96E-70 | -1.69E-46 |
| MS.gene05883 | MS.gene72106 | 0.819663 | 1.03E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene72106 | 0.902857 | 6.31E-79 | -1.69E-46 |
| MS.gene059023 | MS.gene72106 | 0.902178 | 1.26E-78 | -1.69E-46 |
| MS.gene059079 | MS.gene72106 | 0.812929 | 3.31E-51 | -1.69E-46 |
| MS.gene059103 | MS.gene72106 | -0.815152 | 1.07E-51 | -1.69E-46 |
| MS.gene05912 | MS.gene72106 | 0.84185 | 3.70E-58 | -1.69E-46 |
| MS.gene05914 | MS.gene72106 | 0.82602 | 3.41E-54 | -1.69E-46 |
| MS.gene05934 | MS.gene72106 | 0.840443 | 8.67E-58 | -1.69E-46 |
| MS.gene059479 | MS.gene72106 | -0.804506 | 2.09E-49 | -1.69E-46 |
| MS.gene059480 | MS.gene72106 | -0.813022 | 3.16E-51 | -1.69E-46 |
| MS.gene059526 | MS.gene72106 | -0.8178 | 2.73E-52 | -1.69E-46 |
| MS.gene059667 | MS.gene72106 | 0.811128 | 8.17E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene72106 | 0.918914 | 8.65E-87 | -1.69E-46 |
| MS.gene059718 | MS.gene72106 | 0.902356 | 1.05E-78 | -1.69E-46 |
| MS.gene059756 | MS.gene72106 | 0.879169 | 1.55E-69 | -1.69E-46 |
| MS.gene059801 | MS.gene72106 | 0.885441 | 8.11E-72 | -1.69E-46 |
| MS.gene059837 | MS.gene72106 | 0.853617 | 2.12E-61 | -1.69E-46 |
| MS.gene059865 | MS.gene72106 | 0.882733 | 8.13E-71 | -1.69E-46 |
| MS.gene059902 | MS.gene72106 | 0.833004 | 6.84E-56 | -1.69E-46 |
| MS.gene06000 | MS.gene72106 | 0.839844 | 1.24E-57 | -1.69E-46 |
| MS.gene060193 | MS.gene72106 | 0.822288 | 2.57E-53 | -1.69E-46 |
| MS.gene060482 | MS.gene72106 | 0.822419 | 2.39E-53 | -1.69E-46 |
| MS.gene060595 | MS.gene72106 | -0.831267 | 1.84E-55 | -1.69E-46 |
| MS.gene060703 | MS.gene72106 | 0.880649 | 4.61E-70 | -1.69E-46 |
| MS.gene060762 | MS.gene72106 | 0.901925 | 1.64E-78 | -1.69E-46 |
| MS.gene060778 | MS.gene72106 | 0.835317 | 1.80E-56 | -1.69E-46 |
| MS.gene06077 | MS.gene72106 | 0.912771 | 1.33E-83 | -1.69E-46 |
| MS.gene060823 | MS.gene72106 | -0.824668 | 7.13E-54 | -1.69E-46 |
| MS.gene06092 | MS.gene72106 | 0.878474 | 2.73E-69 | -1.69E-46 |
| MS.gene060982 | MS.gene72106 | 0.892371 | 1.69E-74 | -1.69E-46 |
| MS.gene061134 | MS.gene72106 | 0.804405 | 2.19E-49 | -1.69E-46 |
| MS.gene061150 | MS.gene72106 | 0.909636 | 4.57E-82 | -1.69E-46 |
| MS.gene061171 | MS.gene72106 | 0.817074 | 3.98E-52 | -1.69E-46 |
| MS.gene061200 | MS.gene72106 | 0.810845 | 9.41E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 84 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATCAATGGGTTGATTTA+TGG | 0.126424 | 8.4:+22949616 | MS.gene72106:CDS |
| TTTGTGCCCTTACTGGTTTC+TGG | 0.139154 | 8.4:-22949536 | None:intergenic |
| TTAACAAGGTTCTCAATTTC+AGG | 0.184827 | 8.4:+22948468 | MS.gene72106:CDS |
| TTTCAATCCGGAGTAGATTT+TGG | 0.262983 | 8.4:-22948294 | None:intergenic |
| GCACAAGAGGCCCTTGACTA+TGG | 0.268943 | 8.4:+22951598 | MS.gene72106:CDS |
| ATCCGAATTTGTGCCCTTAC+TGG | 0.280153 | 8.4:-22949543 | None:intergenic |
| AAGCTCTACTTGTACATTAA+TGG | 0.307990 | 8.4:+22949927 | MS.gene72106:CDS |
| TCCTTCACCAGGTGTTCTAT+AGG | 0.314306 | 8.4:-22949592 | None:intergenic |
| AGAATTTAGCAATCAAATAT+TGG | 0.329049 | 8.4:+22949866 | MS.gene72106:CDS |
| AATGTACAAGTAGAGCTTCT+TGG | 0.334034 | 8.4:-22949922 | None:intergenic |
| CCTTCACCAGGTGTTCTATA+GGG | 0.336685 | 8.4:-22949591 | None:intergenic |
| GGGGTTGAAACGGTCGTGTA+GGG | 0.363041 | 8.4:-22948159 | None:intergenic |
| CCTCGCAAGGATGCTGGCTC+AGG | 0.377210 | 8.4:+22951667 | MS.gene72106:CDS |
| CCTATATGCACCCATTGTAT+AGG | 0.399844 | 8.4:+22950124 | MS.gene72106:CDS |
| TCTGAGTTGGCTAACAAAAC+AGG | 0.406372 | 8.4:+22951170 | MS.gene72106:CDS |
| GAGCAGCTCCTGCTGGAGAT+TGG | 0.410929 | 8.4:-22950978 | None:intergenic |
| GATGCACCTCGCAAGGATGC+TGG | 0.413454 | 8.4:+22951661 | MS.gene72106:CDS |
| AGCAGGAGCTGCTCGTGGTC+GGG | 0.415509 | 8.4:+22950987 | MS.gene72106:CDS |
| AACCAGTAAGGGCACAAATT+CGG | 0.415853 | 8.4:+22949541 | MS.gene72106:CDS |
| CATTGTATAGGCCAAGCTTA+TGG | 0.426540 | 8.4:+22950136 | MS.gene72106:CDS |
| GGGTTGAAACGGTCGTGTAG+GGG | 0.428860 | 8.4:-22948158 | None:intergenic |
| CCTATACAATGGGTGCATAT+AGG | 0.431234 | 8.4:-22950124 | None:intergenic |
| AGATCACCGAAGACTTGAAA+AGG | 0.434233 | 8.4:+22951560 | MS.gene72106:intron |
| TGGGAGACAAACAGCGGATA+GGG | 0.447908 | 8.4:-22948098 | None:intergenic |
| AAAATGGCACACGTGAAGAT+TGG | 0.449027 | 8.4:-22948319 | None:intergenic |
| CGACCACGAGCAGCTCCTGC+TGG | 0.449924 | 8.4:-22950985 | None:intergenic |
| GGTTGAAACGGTCGTGTAGG+GGG | 0.450401 | 8.4:-22948157 | None:intergenic |
| CAGCAGGAGCTGCTCGTGGT+CGG | 0.460713 | 8.4:+22950986 | MS.gene72106:CDS |
| TACTTGTACATTAATGGTCC+TGG | 0.468494 | 8.4:+22949933 | MS.gene72106:CDS |
| GCAGCATTTCTACTTGCAGC+TGG | 0.472807 | 8.4:+22950163 | MS.gene72106:CDS |
| AGTGAACTGACCTTCTCAAC+AGG | 0.482520 | 8.4:-22951197 | None:intergenic |
| GTGAACGACGATGGAAGGAA+TGG | 0.484679 | 8.4:-22948118 | None:intergenic |
| AAGGATGCTGGCTCAGGCAT+TGG | 0.507073 | 8.4:+22951673 | MS.gene72106:CDS |
| ATAAGCTTGGCCTATACAAT+GGG | 0.511333 | 8.4:-22950134 | None:intergenic |
| CTGGTGAAGGAACTTATCAA+TGG | 0.511648 | 8.4:+22949604 | MS.gene72106:CDS |
| CACAAGAGGCCCTTGACTAT+GGG | 0.513257 | 8.4:+22951599 | MS.gene72106:CDS |
| GGTGTTCTATAGGGCACTCT+AGG | 0.519447 | 8.4:-22949582 | None:intergenic |
| GGCTCATTGACAGAATTGTC+AGG | 0.528948 | 8.4:+22951620 | MS.gene72106:CDS |
| TGAAGATTGGAGTTTCAATC+CGG | 0.529739 | 8.4:-22948306 | None:intergenic |
| CATAAGCTTGGCCTATACAA+TGG | 0.531992 | 8.4:-22950135 | None:intergenic |
| ATGGGAGACAAACAGCGGAT+AGG | 0.535058 | 8.4:-22948099 | None:intergenic |
| CAAATTCGGATGATGCCCAT+TGG | 0.537610 | 8.4:+22949555 | MS.gene72106:CDS |
| TGGTGAAGGAACTTATCAAT+GGG | 0.547080 | 8.4:+22949605 | MS.gene72106:CDS |
| TGAACGACGATGGAAGGAAT+GGG | 0.549143 | 8.4:-22948117 | None:intergenic |
| AACAGGCCAGCCTGTTGAGA+AGG | 0.549239 | 8.4:+22951187 | MS.gene72106:CDS |
| ATGCTAACCAGAAACCAGTA+AGG | 0.549654 | 8.4:+22949529 | MS.gene72106:CDS |
| CATTGATAAGTTCCTTCACC+AGG | 0.553758 | 8.4:-22949603 | None:intergenic |
| AAAAGCTGATGCACCTCGCA+AGG | 0.558743 | 8.4:+22951654 | MS.gene72106:CDS |
| TTGAGGTGAACGACGATGGA+AGG | 0.559153 | 8.4:-22948123 | None:intergenic |
| CGAGAACGTGTTATCTTCAT+CGG | 0.562508 | 8.4:+22949828 | MS.gene72106:CDS |
| AACTGACCTTCTCAACAGGC+TGG | 0.565578 | 8.4:-22951193 | None:intergenic |
| GGGCACTCTAGGAGTTCCAA+TGG | 0.565955 | 8.4:-22949571 | None:intergenic |
| TCTACTTGCAGCTGGAGAGA+AGG | 0.566048 | 8.4:+22950171 | MS.gene72106:CDS |
| CCCGTGTTTATTCTCCTCCT+AGG | 0.566421 | 8.4:+22948181 | MS.gene72106:CDS |
| CCCTATAGAACACCTGGTGA+AGG | 0.567690 | 8.4:+22949591 | MS.gene72106:CDS |
| GATCACCGAAGACTTGAAAA+GGG | 0.568998 | 8.4:+22951561 | MS.gene72106:intron |
| TGTCAATGAGCCCATAGTCA+AGG | 0.569550 | 8.4:-22951609 | None:intergenic |
| ATGCTGCAAGACCATAAGCT+TGG | 0.573039 | 8.4:-22950147 | None:intergenic |
| CATGTTGAGGTGAACGACGA+TGG | 0.577171 | 8.4:-22948127 | None:intergenic |
| CCTGAGCCAGCATCCTTGCG+AGG | 0.577721 | 8.4:-22951667 | None:intergenic |
| GTTTCCACCAAAATCTACTC+CGG | 0.585864 | 8.4:+22948287 | MS.gene72106:CDS |
| TCTCCAGCAGGAGCTGCTCG+TGG | 0.586081 | 8.4:+22950982 | MS.gene72106:CDS |
| TGGAGAACAATTCTTGCAAG+AGG | 0.588103 | 8.4:-22950958 | None:intergenic |
| GTCAATGAGCCCATAGTCAA+GGG | 0.588285 | 8.4:-22951608 | None:intergenic |
| TTGACAGAATTGTCAGGCCA+CGG | 0.588957 | 8.4:+22951626 | MS.gene72106:CDS |
| ATTGTTCTCCAATCTCCAGC+AGG | 0.591740 | 8.4:+22950970 | MS.gene72106:CDS |
| GGCACTCTAGGAGTTCCAAT+GGG | 0.595604 | 8.4:-22949570 | None:intergenic |
| TGTACATTAATGGTCCTGGT+GGG | 0.599482 | 8.4:+22949937 | MS.gene72106:CDS |
| AGAGTGCCCTATAGAACACC+TGG | 0.609227 | 8.4:+22949585 | MS.gene72106:CDS |
| AGGAGTCTGCAAGCTTTGCA+TGG | 0.619828 | 8.4:-22950104 | None:intergenic |
| ATTGTGTGAGATTACCTAGG+AGG | 0.620949 | 8.4:-22948195 | None:intergenic |
| AAAACGATTTGATGCACAAG+AGG | 0.623503 | 8.4:+22951585 | MS.gene72106:CDS |
| TTGTACATTAATGGTCCTGG+TGG | 0.642823 | 8.4:+22949936 | MS.gene72106:CDS |
| GTACATTAATGGTCCTGGTG+GGG | 0.651895 | 8.4:+22949938 | MS.gene72106:CDS |
| ACCTAGGAGGAGAATAAACA+CGG | 0.655551 | 8.4:-22948182 | None:intergenic |
| TCATTACTTACATCCCCACC+AGG | 0.676936 | 8.4:-22949951 | None:intergenic |
| TGCTAACCAGAAACCAGTAA+GGG | 0.683549 | 8.4:+22949530 | MS.gene72106:CDS |
| CGTCGTTCACCTCAACATGA+CGG | 0.689478 | 8.4:+22948131 | MS.gene72106:CDS |
| CCTAGGAGGAGAATAAACAC+GGG | 0.702649 | 8.4:-22948181 | None:intergenic |
| GTATCGTAGAGAGACATGCA+TGG | 0.715789 | 8.4:-22950082 | None:intergenic |
| CTAGGAGGAGAATAAACACG+GGG | 0.729198 | 8.4:-22948180 | None:intergenic |
| AGGAGGAGAATAAACACGGG+GGG | 0.747945 | 8.4:-22948178 | None:intergenic |
| AAGGAATGGGAGACAAACAG+CGG | 0.758063 | 8.4:-22948104 | None:intergenic |
| TAGGAGGAGAATAAACACGG+GGG | 0.826083 | 8.4:-22948179 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGTTCTTGAAAAATATT+TGG | + | chr8.4:22951323-22951342 | MS.gene72106:intron | 15.0% |
| !! | AAATTGAATTGAAAAATTTG+TGG | - | chr8.4:22948224-22948243 | None:intergenic | 15.0% |
| !! | AATTGAATTGAAAAATTTGT+GGG | - | chr8.4:22948223-22948242 | None:intergenic | 15.0% |
| !! | CTATAAATATAATACATGTT+AGG | - | chr8.4:22950567-22950586 | None:intergenic | 15.0% |
| !!! | ACTCATTTTTTTAGAAAAAA+TGG | + | chr8.4:22948765-22948784 | MS.gene72106:intron | 15.0% |
| !!! | TAGAAAAAATGGATTTTTAT+GGG | + | chr8.4:22948776-22948795 | MS.gene72106:intron | 15.0% |
| !!! | TTAGAAAAAATGGATTTTTA+TGG | + | chr8.4:22948775-22948794 | MS.gene72106:intron | 15.0% |
| !!! | TTATGATTGGTATTTTTTTA+AGG | + | chr8.4:22949120-22949139 | MS.gene72106:intron | 15.0% |
| !! | AATATTAAACTAGAAACAAG+AGG | - | chr8.4:22950007-22950026 | None:intergenic | 20.0% |
| !! | AATCATAATATTTAACACCA+CGG | - | chr8.4:22949108-22949127 | None:intergenic | 20.0% |
| !! | AGAATTTAGCAATCAAATAT+TGG | + | chr8.4:22949866-22949885 | MS.gene72106:CDS | 20.0% |
| !! | GAAGAATGAAATTAAGAAAA+TGG | - | chr8.4:22948338-22948357 | None:intergenic | 20.0% |
| !! | GTAATATTCTGTTGTATTAA+GGG | + | chr8.4:22950919-22950938 | MS.gene72106:intron | 20.0% |
| !! | GTATGTTAAAATGAAAAAGT+TGG | + | chr8.4:22950641-22950660 | MS.gene72106:intron | 20.0% |
| !! | TAAAAAGATTTCCTACATTA+CGG | + | chr8.4:22950290-22950309 | MS.gene72106:intron | 20.0% |
| !! | TAAGTAATGATTCTAATGTT+TGG | + | chr8.4:22949964-22949983 | MS.gene72106:intron | 20.0% |
| !! | TACCTAAAAACATAAAAGTT+TGG | - | chr8.4:22949510-22949529 | None:intergenic | 20.0% |
| !! | TGTAATATTCTGTTGTATTA+AGG | + | chr8.4:22950918-22950937 | MS.gene72106:intron | 20.0% |
| !! | TTATATATAACCACAAAAGA+AGG | + | chr8.4:22950499-22950518 | MS.gene72106:intron | 20.0% |
| !!! | ATCTATTTTTTTCAACAACA+AGG | + | chr8.4:22948719-22948738 | MS.gene72106:intron | 20.0% |
| !!! | ATTTTTTGTTAATTTCCTGT+TGG | + | chr8.4:22948962-22948981 | MS.gene72106:intron | 20.0% |
| !!! | TCATAATGAGTTTTATTTAC+TGG | + | chr8.4:22951511-22951530 | MS.gene72106:intron | 20.0% |
| !!! | TCATTTTTAAGTGTTTGTTT+TGG | + | chr8.4:22948618-22948637 | MS.gene72106:intron | 20.0% |
| ! | AAAAAGATTTCCTACATTAC+GGG | + | chr8.4:22950291-22950310 | MS.gene72106:intron | 25.0% |
| ! | ATCAGCAAGTAATTGATTAT+GGG | + | chr8.4:22948534-22948553 | MS.gene72106:intron | 25.0% |
| ! | ATGATCCTTAATCATATTTG+TGG | - | chr8.4:22950426-22950445 | None:intergenic | 25.0% |
| ! | ATTCTCAATATAATCAAGGA+TGG | + | chr8.4:22950335-22950354 | MS.gene72106:intron | 25.0% |
| ! | TATCAGCAAGTAATTGATTA+TGG | + | chr8.4:22948533-22948552 | MS.gene72106:intron | 25.0% |
| ! | TCCTAAAATGAAAAGCTATT+AGG | + | chr8.4:22948681-22948700 | MS.gene72106:intron | 25.0% |
| ! | TGTGACATTCATTTCTAAAT+TGG | + | chr8.4:22950805-22950824 | MS.gene72106:intron | 25.0% |
| ! | TTGCATTCTCAATATAATCA+AGG | + | chr8.4:22950331-22950350 | MS.gene72106:intron | 25.0% |
| ! | TTTCCATAATTTCAAACTAC+CGG | - | chr8.4:22950672-22950691 | None:intergenic | 25.0% |
| !! | AAAGTACCTGAAATTGAAAA+CGG | - | chr8.4:22948398-22948417 | None:intergenic | 25.0% |
| !! | GAATTTAACTTCATCTACAA+AGG | - | chr8.4:22951353-22951372 | None:intergenic | 25.0% |
| !! | GTGGTGTTAAATATTATGAT+TGG | + | chr8.4:22949107-22949126 | MS.gene72106:intron | 25.0% |
| !! | TATTTGGAATAAGATTGTGA+TGG | - | chr8.4:22950757-22950776 | None:intergenic | 25.0% |
| !! | TCCTAATAGCTTTTCATTTT+AGG | - | chr8.4:22948685-22948704 | None:intergenic | 25.0% |
| !! | TGAAAGTATGGATTAAAACA+TGG | + | chr8.4:22949377-22949396 | MS.gene72106:intron | 25.0% |
| !! | TGCCAAACTTTTATGTTTTT+AGG | + | chr8.4:22949505-22949524 | MS.gene72106:intron | 25.0% |
| !!! | AATGTAAACTCTCAGTTTTT+TGG | + | chr8.4:22948440-22948459 | MS.gene72106:CDS | 25.0% |
| !!! | ATTATTATTTTCGGATTAGC+AGG | + | chr8.4:22949046-22949065 | MS.gene72106:intron | 25.0% |
| !!! | GTTTTAATCCATACTTTCAT+TGG | - | chr8.4:22949376-22949395 | None:intergenic | 25.0% |
| !!! | GTTTTTTGGTAAAGTTAACA+AGG | + | chr8.4:22948454-22948473 | MS.gene72106:CDS | 25.0% |
| !!! | TATTTTTTTCAACAACAAGG+AGG | + | chr8.4:22948722-22948741 | MS.gene72106:intron | 25.0% |
| !!! | TCACTTTAAAATGGAATTCA+TGG | + | chr8.4:22951215-22951234 | MS.gene72106:intron | 25.0% |
| !!! | TCTTAGAGTTCATTTTTTCA+TGG | + | chr8.4:22951471-22951490 | MS.gene72106:intron | 25.0% |
| !!! | TTTTCAATTTCAGGTACTTT+TGG | + | chr8.4:22948398-22948417 | MS.gene72106:intron | 25.0% |
| AAAACATGGTTTATGTCACT+TGG | + | chr8.4:22949391-22949410 | MS.gene72106:intron | 30.0% | |
| AAAAGACGAAAATAAACTCG+AGG | - | chr8.4:22949763-22949782 | None:intergenic | 30.0% | |
| AACATTGTGAAAACTCTTTC+AGG | + | chr8.4:22951091-22951110 | MS.gene72106:intron | 30.0% | |
| AAGCTCTACTTGTACATTAA+TGG | + | chr8.4:22949927-22949946 | MS.gene72106:CDS | 30.0% | |
| AAGTTAAACTTGTCATAGCA+CGG | + | chr8.4:22950232-22950251 | MS.gene72106:intron | 30.0% | |
| AAGTTGTATTAACAGACAGT+GGG | - | chr8.4:22950208-22950227 | None:intergenic | 30.0% | |
| AATGAAGCTTAGATATCGAA+AGG | - | chr8.4:22951412-22951431 | None:intergenic | 30.0% | |
| ATCCTTAATCATATTTGTGG+TGG | - | chr8.4:22950423-22950442 | None:intergenic | 30.0% | |
| ATGATCATTCATGACAGTTA+AGG | - | chr8.4:22950595-22950614 | None:intergenic | 30.0% | |
| CAAGATGTAACAACTTACAA+GGG | - | chr8.4:22949646-22949665 | None:intergenic | 30.0% | |
| CATACAGAGAAGAAGTTATT+TGG | - | chr8.4:22951301-22951320 | None:intergenic | 30.0% | |
| GTAATGATTCTAATGTTTGG+TGG | + | chr8.4:22949967-22949986 | MS.gene72106:intron | 30.0% | |
| GTATAAAGTCCATTCAACAA+AGG | - | chr8.4:22950361-22950380 | None:intergenic | 30.0% | |
| GTTAAAATGAAAAAGTTGGC+AGG | + | chr8.4:22950645-22950664 | MS.gene72106:intron | 30.0% | |
| TACATAGATATCTCTTCTGT+AGG | - | chr8.4:22950387-22950406 | None:intergenic | 30.0% | |
| TCAAGATGTAACAACTTACA+AGG | - | chr8.4:22949647-22949666 | None:intergenic | 30.0% | |
| TCCTTAATCATATTTGTGGT+GGG | - | chr8.4:22950422-22950441 | None:intergenic | 30.0% | |
| TGACATCTATCTCAGAAAAA+AGG | - | chr8.4:22951021-22951040 | None:intergenic | 30.0% | |
| TGTATAATACCAGTGACATA+GGG | - | chr8.4:22948910-22948929 | None:intergenic | 30.0% | |
| TTAAATAGCTGATCGTCAAA+AGG | - | chr8.4:22950030-22950049 | None:intergenic | 30.0% | |
| TTAACAAGGTTCTCAATTTC+AGG | + | chr8.4:22948468-22948487 | MS.gene72106:CDS | 30.0% | |
| TTCTTTGACCAATGAAAGTA+TGG | + | chr8.4:22949365-22949384 | MS.gene72106:intron | 30.0% | |
| ! | AAACATGGTTTATGTCACTT+GGG | + | chr8.4:22949392-22949411 | MS.gene72106:intron | 30.0% |
| ! | AAACTCATTTCCTTCTTTTG+TGG | - | chr8.4:22950512-22950531 | None:intergenic | 30.0% |
| ! | AAGGTCAGTTCACTTTAAAA+TGG | + | chr8.4:22951206-22951225 | MS.gene72106:intron | 30.0% |
| ! | AGATTATCTTTTCTCTGAGT+TGG | + | chr8.4:22951157-22951176 | MS.gene72106:CDS | 30.0% |
| ! | ATCACAAATGTAATTTTGCG+AGG | + | chr8.4:22949327-22949346 | MS.gene72106:intron | 30.0% |
| !! | CTTATCAATGGGTTGATTTA+TGG | + | chr8.4:22949616-22949635 | MS.gene72106:CDS | 30.0% |
| !! | GAACTCTAAGATACACAAAA+TGG | - | chr8.4:22951462-22951481 | None:intergenic | 30.0% |
| !!! | TTTTACCCTTTTCAAGTCTT+CGG | - | chr8.4:22951569-22951588 | None:intergenic | 30.0% |
| AAAACGATTTGATGCACAAG+AGG | + | chr8.4:22951585-22951604 | MS.gene72106:CDS | 35.0% | |
| AATGTACAAGTAGAGCTTCT+TGG | - | chr8.4:22949925-22949944 | None:intergenic | 35.0% | |
| AATGTCACAACAAAGCAGAA+TGG | - | chr8.4:22950794-22950813 | None:intergenic | 35.0% | |
| AGTCAAAGACTCAATACTAC+AGG | - | chr8.4:22950854-22950873 | None:intergenic | 35.0% | |
| AGTTAAACTTGTCATAGCAC+GGG | + | chr8.4:22950233-22950252 | MS.gene72106:intron | 35.0% | |
| ATAAGCTTGGCCTATACAAT+GGG | - | chr8.4:22950137-22950156 | None:intergenic | 35.0% | |
| ATCTATCTCAGAAAAAAGGC+AGG | - | chr8.4:22951017-22951036 | None:intergenic | 35.0% | |
| ATGATATTTGTCGCGAGAAA+TGG | + | chr8.4:22949146-22949165 | MS.gene72106:intron | 35.0% | |
| CAAGTTGTATTAACAGACAG+TGG | - | chr8.4:22950209-22950228 | None:intergenic | 35.0% | |
| CCTTAATCATATTTGTGGTG+GGG | - | chr8.4:22950421-22950440 | None:intergenic | 35.0% | |
| GTGTATAATACCAGTGACAT+AGG | - | chr8.4:22948911-22948930 | None:intergenic | 35.0% | |
| TAACTGATTAAGATCTCTCC+TGG | - | chr8.4:22949245-22949264 | None:intergenic | 35.0% | |
| TAATTAGTTGCTTCCCAAGA+GGG | + | chr8.4:22949211-22949230 | MS.gene72106:intron | 35.0% | |
| TACTTGTACATTAATGGTCC+TGG | + | chr8.4:22949933-22949952 | MS.gene72106:CDS | 35.0% | |
| TGAAGATTGGAGTTTCAATC+CGG | - | chr8.4:22948309-22948328 | None:intergenic | 35.0% | |
| TGATATTTGTCGCGAGAAAT+GGG | + | chr8.4:22949147-22949166 | MS.gene72106:intron | 35.0% | |
| TGGTGAAGGAACATAGTAAT+GGG | + | chr8.4:22949703-22949722 | MS.gene72106:intron | 35.0% | |
| TGGTGAAGGAACTTATCAAT+GGG | + | chr8.4:22949605-22949624 | MS.gene72106:CDS | 35.0% | |
| TTGTACGCTTATCTAAGAAC+TGG | + | chr8.4:22949683-22949702 | MS.gene72106:intron | 35.0% | |
| ! | AGGTTCTCAATTTCAGGTAA+TGG | + | chr8.4:22948474-22948493 | MS.gene72106:intron | 35.0% |
| ! | CATTCACCGTTTTCAATTTC+AGG | + | chr8.4:22948389-22948408 | MS.gene72106:intron | 35.0% |
| ! | GATACATTTTTCCTAGATGC+TGG | + | chr8.4:22949009-22949028 | MS.gene72106:intron | 35.0% |
| ! | GGTTCTCAATTTCAGGTAAT+GGG | + | chr8.4:22948475-22948494 | MS.gene72106:intron | 35.0% |
| ! | GTTACTTTATGACGTAGTCA+TGG | + | chr8.4:22949725-22949744 | MS.gene72106:intron | 35.0% |
| ! | TTGAGTCTTTGACTTCTCTA+AGG | + | chr8.4:22950860-22950879 | MS.gene72106:intron | 35.0% |
| ! | TTTCAATCCGGAGTAGATTT+TGG | - | chr8.4:22948297-22948316 | None:intergenic | 35.0% |
| ! | TTTTGGTGGAAACACTGAAA+TGG | - | chr8.4:22948280-22948299 | None:intergenic | 35.0% |
| !! | AATTTCAGGTAATGGGTTGT+GGG | + | chr8.4:22948482-22948501 | MS.gene72106:intron | 35.0% |
| !! | CAATTGACTCTGCTTTTACA+AGG | + | chr8.4:22951372-22951391 | MS.gene72106:intron | 35.0% |
| !! | CTTTAATTTGTGAGTCCTTC+AGG | + | chr8.4:22949266-22949285 | MS.gene72106:intron | 35.0% |
| AAAATGGCACACGTGAAGAT+TGG | - | chr8.4:22948322-22948341 | None:intergenic | 40.0% | |
| AAGCAGAATGGAGTACAAAG+CGG | - | chr8.4:22950782-22950801 | None:intergenic | 40.0% | |
| AATGAAAAAGTTGGCAGGTC+CGG | + | chr8.4:22950650-22950669 | MS.gene72106:intron | 40.0% | |
| AATGATTGCTTCCAGCATCT+AGG | - | chr8.4:22949023-22949042 | None:intergenic | 40.0% | |
| ACATGTTAGGTACTCACCTT+TGG | - | chr8.4:22950554-22950573 | None:intergenic | 40.0% | |
| ACCTAGGAGGAGAATAAACA+CGG | - | chr8.4:22948185-22948204 | None:intergenic | 40.0% | |
| AGATCACCGAAGACTTGAAA+AGG | + | chr8.4:22951560-22951579 | MS.gene72106:intron | 40.0% | |
| ATGCTAACCAGAAACCAGTA+AGG | + | chr8.4:22949529-22949548 | MS.gene72106:CDS | 40.0% | |
| ATTGTGTGAGATTACCTAGG+AGG | - | chr8.4:22948198-22948217 | None:intergenic | 40.0% | |
| CATAAGCTTGGCCTATACAA+TGG | - | chr8.4:22950138-22950157 | None:intergenic | 40.0% | |
| CATTGATAAGTTCCTTCACC+AGG | - | chr8.4:22949606-22949625 | None:intergenic | 40.0% | |
| CATTGTATAGGCCAAGCTTA+TGG | + | chr8.4:22950136-22950155 | MS.gene72106:CDS | 40.0% | |
| CCCCACCACAAATATGATTA+AGG | + | chr8.4:22950418-22950437 | MS.gene72106:intron | 40.0% | |
| CCTATACAATGGGTGCATAT+AGG | - | chr8.4:22950127-22950146 | None:intergenic | 40.0% | |
| CCTATATGCACCCATTGTAT+AGG | + | chr8.4:22950124-22950143 | MS.gene72106:CDS | 40.0% | |
| CGAGAACGTGTTATCTTCAT+CGG | + | chr8.4:22949828-22949847 | MS.gene72106:CDS | 40.0% | |
| CTAATTAGTTGCTTCCCAAG+AGG | + | chr8.4:22949210-22949229 | MS.gene72106:intron | 40.0% | |
| CTGGTGAAGGAACATAGTAA+TGG | + | chr8.4:22949702-22949721 | MS.gene72106:intron | 40.0% | |
| CTGGTGAAGGAACTTATCAA+TGG | + | chr8.4:22949604-22949623 | MS.gene72106:CDS | 40.0% | |
| GAGATTGTGTGAGATTACCT+AGG | - | chr8.4:22948201-22948220 | None:intergenic | 40.0% | |
| GATCACCGAAGACTTGAAAA+GGG | + | chr8.4:22951561-22951580 | MS.gene72106:intron | 40.0% | |
| GCTTATCTAAGAACTGGTGA+AGG | + | chr8.4:22949689-22949708 | MS.gene72106:intron | 40.0% | |
| GGAGTACAAAGCGGAATATT+TGG | - | chr8.4:22950773-22950792 | None:intergenic | 40.0% | |
| GTTAAACTTGTCATAGCACG+GGG | + | chr8.4:22950234-22950253 | MS.gene72106:intron | 40.0% | |
| GTTTCCACCAAAATCTACTC+CGG | + | chr8.4:22948287-22948306 | MS.gene72106:CDS | 40.0% | |
| TCTTCGGTGATCTGAAGATA+TGG | - | chr8.4:22951553-22951572 | None:intergenic | 40.0% | |
| TGCTAACCAGAAACCAGTAA+GGG | + | chr8.4:22949530-22949549 | MS.gene72106:CDS | 40.0% | |
| TGGAGAACAATTCTTGCAAG+AGG | - | chr8.4:22950961-22950980 | None:intergenic | 40.0% | |
| TGTACATTAATGGTCCTGGT+GGG | + | chr8.4:22949937-22949956 | MS.gene72106:CDS | 40.0% | |
| TTGTACATTAATGGTCCTGG+TGG | + | chr8.4:22949936-22949955 | MS.gene72106:CDS | 40.0% | |
| ! | AACCAGTAAGGGCACAAATT+CGG | + | chr8.4:22949541-22949560 | MS.gene72106:CDS | 40.0% |
| ! | CAAAAGCATAAGTGGTAGCA+CGG | + | chr8.4:22949174-22949193 | MS.gene72106:intron | 40.0% |
| ! | CAATCGACAGTTGATATTGC+TGG | - | chr8.4:22950622-22950641 | None:intergenic | 40.0% |
| ! | GATTATGGGTGCGTTTGTTT+TGG | + | chr8.4:22948548-22948567 | MS.gene72106:intron | 40.0% |
| ! | GGTCCGGTAGTTTGAAATTA+TGG | + | chr8.4:22950666-22950685 | MS.gene72106:intron | 40.0% |
| ! | TCTGAGTTGGCTAACAAAAC+AGG | + | chr8.4:22951170-22951189 | MS.gene72106:CDS | 40.0% |
| !! | CAATTTCAGGTAATGGGTTG+TGG | + | chr8.4:22948481-22948500 | MS.gene72106:intron | 40.0% |
| AAGGAATGGGAGACAAACAG+CGG | - | chr8.4:22948107-22948126 | None:intergenic | 45.0% | |
| AGTGAACTGACCTTCTCAAC+AGG | - | chr8.4:22951200-22951219 | None:intergenic | 45.0% | |
| ATAAACACGGGGGGTTGAAA+CGG | - | chr8.4:22948172-22948191 | None:intergenic | 45.0% | |
| ATCCGAATTTGTGCCCTTAC+TGG | - | chr8.4:22949546-22949565 | None:intergenic | 45.0% | |
| ATGCTGCAAGACCATAAGCT+TGG | - | chr8.4:22950150-22950169 | None:intergenic | 45.0% | |
| ATTGTTCTCCAATCTCCAGC+AGG | + | chr8.4:22950970-22950989 | MS.gene72106:CDS | 45.0% | |
| CAAATTCGGATGATGCCCAT+TGG | + | chr8.4:22949555-22949574 | MS.gene72106:CDS | 45.0% | |
| CAAGGAGGTAACACATGTAC+AGG | + | chr8.4:22948737-22948756 | MS.gene72106:intron | 45.0% | |
| CAAGGATGGCCTTTGTTGAA+TGG | + | chr8.4:22950349-22950368 | MS.gene72106:intron | 45.0% | |
| CCATTGTGTTTGCATCCAAC+AGG | - | chr8.4:22948980-22948999 | None:intergenic | 45.0% | |
| CCTAGGAGGAGAATAAACAC+GGG | - | chr8.4:22948184-22948203 | None:intergenic | 45.0% | |
| CCTGTTGGATGCAAACACAA+TGG | + | chr8.4:22948977-22948996 | MS.gene72106:intron | 45.0% | |
| CCTTCACCAGGTGTTCTATA+GGG | - | chr8.4:22949594-22949613 | None:intergenic | 45.0% | |
| CTAGGAGGAGAATAAACACG+GGG | - | chr8.4:22948183-22948202 | None:intergenic | 45.0% | |
| GGCTCATTGACAGAATTGTC+AGG | + | chr8.4:22951620-22951639 | MS.gene72106:CDS | 45.0% | |
| GTACATTAATGGTCCTGGTG+GGG | + | chr8.4:22949938-22949957 | MS.gene72106:CDS | 45.0% | |
| GTATCGTAGAGAGACATGCA+TGG | - | chr8.4:22950085-22950104 | None:intergenic | 45.0% | |
| GTCAATGAGCCCATAGTCAA+GGG | - | chr8.4:22951611-22951630 | None:intergenic | 45.0% | |
| TAGGAGGAGAATAAACACGG+GGG | - | chr8.4:22948182-22948201 | None:intergenic | 45.0% | |
| TCATTACTTACATCCCCACC+AGG | - | chr8.4:22949954-22949973 | None:intergenic | 45.0% | |
| TCCTACATTACGGGACTGTA+CGG | + | chr8.4:22950300-22950319 | MS.gene72106:intron | 45.0% | |
| TCCTTCACCAGGTGTTCTAT+AGG | - | chr8.4:22949595-22949614 | None:intergenic | 45.0% | |
| TGAACGACGATGGAAGGAAT+GGG | - | chr8.4:22948120-22948139 | None:intergenic | 45.0% | |
| TGATTAAGATCTCTCCTGGC+CGG | - | chr8.4:22949241-22949260 | None:intergenic | 45.0% | |
| TGTCAATGAGCCCATAGTCA+AGG | - | chr8.4:22951612-22951631 | None:intergenic | 45.0% | |
| TTCTCTACTTCTGTCGCCAA+AGG | + | chr8.4:22950535-22950554 | MS.gene72106:intron | 45.0% | |
| TTGACAGAATTGTCAGGCCA+CGG | + | chr8.4:22951626-22951645 | MS.gene72106:CDS | 45.0% | |
| TTGTCATAGCACGGGGTTTA+AGG | + | chr8.4:22950241-22950260 | MS.gene72106:intron | 45.0% | |
| ! | CAATCCGGAGTAGATTTTGG+TGG | - | chr8.4:22948294-22948313 | None:intergenic | 45.0% |
| ! | TGGGATCGCAAAAGCATAAG+TGG | + | chr8.4:22949166-22949185 | MS.gene72106:intron | 45.0% |
| !! | TTTGTGCCCTTACTGGTTTC+TGG | - | chr8.4:22949539-22949558 | None:intergenic | 45.0% |
| !!! | ATCATTATTATTATTATTTT+CGG | + | chr8.4:22949037-22949056 | MS.gene72106:intron | 5.0% |
| AAAAGCTGATGCACCTCGCA+AGG | + | chr8.4:22951654-22951673 | MS.gene72106:CDS | 50.0% | |
| AACCACGATCGTGTTCGTAG+AGG | + | chr8.4:22949077-22949096 | MS.gene72106:intron | 50.0% | |
| AACTGACCTTCTCAACAGGC+TGG | - | chr8.4:22951196-22951215 | None:intergenic | 50.0% | |
| ACAAACGCACCCTATGTCAC+TGG | + | chr8.4:22948898-22948917 | MS.gene72106:intron | 50.0% | |
| ACCGTACAGTCCCGTAATGT+AGG | - | chr8.4:22950304-22950323 | None:intergenic | 50.0% | |
| AGGAGGAGAATAAACACGGG+GGG | - | chr8.4:22948181-22948200 | None:intergenic | 50.0% | |
| AGGAGTCTGCAAGCTTTGCA+TGG | - | chr8.4:22950107-22950126 | None:intergenic | 50.0% | |
| ATGGGAGACAAACAGCGGAT+AGG | - | chr8.4:22948102-22948121 | None:intergenic | 50.0% | |
| CACAAGAGGCCCTTGACTAT+GGG | + | chr8.4:22951599-22951618 | MS.gene72106:CDS | 50.0% | |
| CACGACAAACTGTCTCCTGA+AGG | - | chr8.4:22949284-22949303 | None:intergenic | 50.0% | |
| CATGTTGAGGTGAACGACGA+TGG | - | chr8.4:22948130-22948149 | None:intergenic | 50.0% | |
| CCCGTGTTTATTCTCCTCCT+AGG | + | chr8.4:22948181-22948200 | MS.gene72106:CDS | 50.0% | |
| CCCTATAGAACACCTGGTGA+AGG | + | chr8.4:22949591-22949610 | MS.gene72106:CDS | 50.0% | |
| CGTCGTTCACCTCAACATGA+CGG | + | chr8.4:22948131-22948150 | MS.gene72106:CDS | 50.0% | |
| GCAGCATTTCTACTTGCAGC+TGG | + | chr8.4:22950163-22950182 | MS.gene72106:CDS | 50.0% | |
| GTGAACGACGATGGAAGGAA+TGG | - | chr8.4:22948121-22948140 | None:intergenic | 50.0% | |
| TCTACTTGCAGCTGGAGAGA+AGG | + | chr8.4:22950171-22950190 | MS.gene72106:CDS | 50.0% | |
| TGGGAGACAAACAGCGGATA+GGG | - | chr8.4:22948101-22948120 | None:intergenic | 50.0% | |
| TGTTCGTAGAGGACAAACCG+TGG | + | chr8.4:22949088-22949107 | MS.gene72106:intron | 50.0% | |
| TTGAGGTGAACGACGATGGA+AGG | - | chr8.4:22948126-22948145 | None:intergenic | 50.0% | |
| ! | AGAGTGCCCTATAGAACACC+TGG | + | chr8.4:22949585-22949604 | MS.gene72106:CDS | 50.0% |
| ! | GGCACTCTAGGAGTTCCAAT+GGG | - | chr8.4:22949573-22949592 | None:intergenic | 50.0% |
| ! | GGTGTTCTATAGGGCACTCT+AGG | - | chr8.4:22949585-22949604 | None:intergenic | 50.0% |
| ! | TGCTTCCCAAGAGGGTTTTC+CGG | + | chr8.4:22949219-22949238 | MS.gene72106:intron | 50.0% |
| AACAGGCCAGCCTGTTGAGA+AGG | + | chr8.4:22951187-22951206 | MS.gene72106:CDS | 55.0% | |
| GCACAAGAGGCCCTTGACTA+TGG | + | chr8.4:22951598-22951617 | MS.gene72106:CDS | 55.0% | |
| GGGGTTGAAACGGTCGTGTA+GGG | - | chr8.4:22948162-22948181 | None:intergenic | 55.0% | |
| GGGTTGAAACGGTCGTGTAG+GGG | - | chr8.4:22948161-22948180 | None:intergenic | 55.0% | |
| GGTTGAAACGGTCGTGTAGG+GGG | - | chr8.4:22948160-22948179 | None:intergenic | 55.0% | |
| GTCCTCTACGAACACGATCG+TGG | - | chr8.4:22949082-22949101 | None:intergenic | 55.0% | |
| ! | GCATCAGCTTTTATGCGCCG+TGG | - | chr8.4:22951646-22951665 | None:intergenic | 55.0% |
| ! | GGGCACTCTAGGAGTTCCAA+TGG | - | chr8.4:22949574-22949593 | None:intergenic | 55.0% |
| !! | AAGGATGCTGGCTCAGGCAT+TGG | + | chr8.4:22951673-22951692 | MS.gene72106:CDS | 55.0% |
| CCTGGCCGGAAAACCCTCTT+GGG | - | chr8.4:22949227-22949246 | None:intergenic | 60.0% | |
| GAGCAGCTCCTGCTGGAGAT+TGG | - | chr8.4:22950981-22951000 | None:intergenic | 60.0% | |
| GATGCACCTCGCAAGGATGC+TGG | + | chr8.4:22951661-22951680 | MS.gene72106:CDS | 60.0% | |
| GGGGGTTGAAACGGTCGTGT+AGG | - | chr8.4:22948163-22948182 | None:intergenic | 60.0% | |
| TCCTGGCCGGAAAACCCTCT+TGG | - | chr8.4:22949228-22949247 | None:intergenic | 60.0% | |
| AGCAGGAGCTGCTCGTGGTC+GGG | + | chr8.4:22950987-22951006 | MS.gene72106:CDS | 65.0% | |
| AGGGGGCGACCGTCATGTTG+AGG | - | chr8.4:22948143-22948162 | None:intergenic | 65.0% | |
| CAGCAGGAGCTGCTCGTGGT+CGG | + | chr8.4:22950986-22951005 | MS.gene72106:CDS | 65.0% | |
| CCTGAGCCAGCATCCTTGCG+AGG | - | chr8.4:22951670-22951689 | None:intergenic | 65.0% | |
| TCTCCAGCAGGAGCTGCTCG+TGG | + | chr8.4:22950982-22951001 | MS.gene72106:CDS | 65.0% | |
| ! | CCCAAGAGGGTTTTCCGGCC+AGG | + | chr8.4:22949224-22949243 | MS.gene72106:intron | 65.0% |
| !! | CCTCGCAAGGATGCTGGCTC+AGG | + | chr8.4:22951667-22951686 | MS.gene72106:CDS | 65.0% |
| CGACCACGAGCAGCTCCTGC+TGG | - | chr8.4:22950988-22951007 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 22948076 | 22951699 | 22948076 | ID=MS.gene72106 |
| chr8.4 | mRNA | 22948076 | 22951699 | 22948076 | ID=MS.gene72106.t1;Parent=MS.gene72106 |
| chr8.4 | exon | 22948076 | 22948202 | 22948076 | ID=MS.gene72106.t1.exon1;Parent=MS.gene72106.t1 |
| chr8.4 | CDS | 22948076 | 22948202 | 22948076 | ID=cds.MS.gene72106.t1;Parent=MS.gene72106.t1 |
| chr8.4 | exon | 22948286 | 22948329 | 22948286 | ID=MS.gene72106.t1.exon2;Parent=MS.gene72106.t1 |
| chr8.4 | CDS | 22948286 | 22948329 | 22948286 | ID=cds.MS.gene72106.t1;Parent=MS.gene72106.t1 |
| chr8.4 | exon | 22948411 | 22948489 | 22948411 | ID=MS.gene72106.t1.exon3;Parent=MS.gene72106.t1 |
| chr8.4 | CDS | 22948411 | 22948489 | 22948411 | ID=cds.MS.gene72106.t1;Parent=MS.gene72106.t1 |
| chr8.4 | exon | 22949527 | 22949647 | 22949527 | ID=MS.gene72106.t1.exon4;Parent=MS.gene72106.t1 |
| chr8.4 | CDS | 22949527 | 22949647 | 22949527 | ID=cds.MS.gene72106.t1;Parent=MS.gene72106.t1 |
| chr8.4 | exon | 22949825 | 22949962 | 22949825 | ID=MS.gene72106.t1.exon5;Parent=MS.gene72106.t1 |
| chr8.4 | CDS | 22949825 | 22949962 | 22949825 | ID=cds.MS.gene72106.t1;Parent=MS.gene72106.t1 |
| chr8.4 | exon | 22950076 | 22950192 | 22950076 | ID=MS.gene72106.t1.exon6;Parent=MS.gene72106.t1 |
| chr8.4 | CDS | 22950076 | 22950192 | 22950076 | ID=cds.MS.gene72106.t1;Parent=MS.gene72106.t1 |
| chr8.4 | exon | 22950940 | 22951008 | 22950940 | ID=MS.gene72106.t1.exon7;Parent=MS.gene72106.t1 |
| chr8.4 | CDS | 22950940 | 22951008 | 22950940 | ID=cds.MS.gene72106.t1;Parent=MS.gene72106.t1 |
| chr8.4 | exon | 22951113 | 22951208 | 22951113 | ID=MS.gene72106.t1.exon8;Parent=MS.gene72106.t1 |
| chr8.4 | CDS | 22951113 | 22951208 | 22951113 | ID=cds.MS.gene72106.t1;Parent=MS.gene72106.t1 |
| chr8.4 | exon | 22951562 | 22951699 | 22951562 | ID=MS.gene72106.t1.exon9;Parent=MS.gene72106.t1 |
| chr8.4 | CDS | 22951562 | 22951699 | 22951562 | ID=cds.MS.gene72106.t1;Parent=MS.gene72106.t1 |
| Gene Sequence |
| Protein sequence |
