Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62850.t1 | AES90988.2 | 97.2 | 285 | 8 | 0 | 1 | 285 | 36 | 320 | 5.60E-154 | 553.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62850.t1 | Q9XJ36 | 64.9 | 285 | 94 | 4 | 1 | 285 | 1 | 279 | 2.4e-100 | 366.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62850.t1 | G7JK76 | 97.2 | 285 | 8 | 0 | 1 | 285 | 36 | 320 | 4.1e-154 | 553.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene62850 | 0.846776 | 1.76E-59 | -1.69E-46 |
| MS.gene049171 | MS.gene62850 | 0.908024 | 2.68E-81 | -1.69E-46 |
| MS.gene049173 | MS.gene62850 | 0.81053 | 1.10E-50 | -1.69E-46 |
| MS.gene049217 | MS.gene62850 | 0.869791 | 2.38E-66 | -1.69E-46 |
| MS.gene049222 | MS.gene62850 | 0.90681 | 9.96E-81 | -1.69E-46 |
| MS.gene049232 | MS.gene62850 | 0.845766 | 3.31E-59 | -1.69E-46 |
| MS.gene049285 | MS.gene62850 | 0.908496 | 1.60E-81 | -1.69E-46 |
| MS.gene049320 | MS.gene62850 | 0.906265 | 1.78E-80 | -1.69E-46 |
| MS.gene04939 | MS.gene62850 | 0.810782 | 9.71E-51 | -1.69E-46 |
| MS.gene049609 | MS.gene62850 | 0.858591 | 7.42E-63 | -1.69E-46 |
| MS.gene049615 | MS.gene62850 | 0.851113 | 1.10E-60 | -1.69E-46 |
| MS.gene049627 | MS.gene62850 | 0.894277 | 2.87E-75 | -1.69E-46 |
| MS.gene049633 | MS.gene62850 | 0.847166 | 1.37E-59 | -1.69E-46 |
| MS.gene049657 | MS.gene62850 | 0.808874 | 2.50E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene62850 | 0.833657 | 4.70E-56 | -1.69E-46 |
| MS.gene049865 | MS.gene62850 | 0.807798 | 4.24E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene62850 | 0.877245 | 7.33E-69 | -1.69E-46 |
| MS.gene050163 | MS.gene62850 | 0.915304 | 6.90E-85 | -1.69E-46 |
| MS.gene050165 | MS.gene62850 | 0.907582 | 4.34E-81 | -1.69E-46 |
| MS.gene050170 | MS.gene62850 | 0.874564 | 6.12E-68 | -1.69E-46 |
| MS.gene050323 | MS.gene62850 | 0.857334 | 1.75E-62 | -1.69E-46 |
| MS.gene050333 | MS.gene62850 | 0.868499 | 6.24E-66 | -1.69E-46 |
| MS.gene050444 | MS.gene62850 | 0.838506 | 2.76E-57 | -1.69E-46 |
| MS.gene050496 | MS.gene62850 | 0.847226 | 1.32E-59 | -1.69E-46 |
| MS.gene050504 | MS.gene62850 | 0.919442 | 4.48E-87 | -1.69E-46 |
| MS.gene050518 | MS.gene62850 | 0.918276 | 1.90E-86 | -1.69E-46 |
| MS.gene050538 | MS.gene62850 | 0.838623 | 2.58E-57 | -1.69E-46 |
| MS.gene050577 | MS.gene62850 | 0.921524 | 3.20E-88 | -1.69E-46 |
| MS.gene050593 | MS.gene62850 | 0.820736 | 5.86E-53 | -1.69E-46 |
| MS.gene050612 | MS.gene62850 | 0.904173 | 1.62E-79 | -1.69E-46 |
| MS.gene050675 | MS.gene62850 | 0.874387 | 7.03E-68 | -1.69E-46 |
| MS.gene050699 | MS.gene62850 | 0.911422 | 6.19E-83 | -1.69E-46 |
| MS.gene050747 | MS.gene62850 | 0.869217 | 3.65E-66 | -1.69E-46 |
| MS.gene050772 | MS.gene62850 | 0.875724 | 2.46E-68 | -1.69E-46 |
| MS.gene050781 | MS.gene62850 | 0.822433 | 2.38E-53 | -1.69E-46 |
| MS.gene05080 | MS.gene62850 | 0.844994 | 5.36E-59 | -1.69E-46 |
| MS.gene050868 | MS.gene62850 | 0.865058 | 7.78E-65 | -1.69E-46 |
| MS.gene050871 | MS.gene62850 | 0.862261 | 5.74E-64 | -1.69E-46 |
| MS.gene050876 | MS.gene62850 | 0.876168 | 1.73E-68 | -1.69E-46 |
| MS.gene05087 | MS.gene62850 | 0.850264 | 1.90E-60 | -1.69E-46 |
| MS.gene050883 | MS.gene62850 | -0.810973 | 8.83E-51 | -1.69E-46 |
| MS.gene050904 | MS.gene62850 | 0.891135 | 5.24E-74 | -1.69E-46 |
| MS.gene050950 | MS.gene62850 | 0.863557 | 2.29E-64 | -1.69E-46 |
| MS.gene050986 | MS.gene62850 | 0.890429 | 9.94E-74 | -1.69E-46 |
| MS.gene05100 | MS.gene62850 | 0.885935 | 5.29E-72 | -1.69E-46 |
| MS.gene051268 | MS.gene62850 | 0.814443 | 1.54E-51 | -1.69E-46 |
| MS.gene051317 | MS.gene62850 | 0.896242 | 4.45E-76 | -1.69E-46 |
| MS.gene051336 | MS.gene62850 | 0.804928 | 1.71E-49 | -1.69E-46 |
| MS.gene051364 | MS.gene62850 | -0.828166 | 1.05E-54 | -1.69E-46 |
| MS.gene051366 | MS.gene62850 | -0.821746 | 3.43E-53 | -1.69E-46 |
| MS.gene051367 | MS.gene62850 | -0.800283 | 1.55E-48 | -1.69E-46 |
| MS.gene051551 | MS.gene62850 | 0.87286 | 2.30E-67 | -1.69E-46 |
| MS.gene051666 | MS.gene62850 | 0.855952 | 4.47E-62 | -1.69E-46 |
| MS.gene051694 | MS.gene62850 | 0.860084 | 2.64E-63 | -1.69E-46 |
| MS.gene051810 | MS.gene62850 | 0.832924 | 7.16E-56 | -1.69E-46 |
| MS.gene051838 | MS.gene62850 | 0.81127 | 7.61E-51 | -1.69E-46 |
| MS.gene051858 | MS.gene62850 | 0.835391 | 1.72E-56 | -1.69E-46 |
| MS.gene051949 | MS.gene62850 | 0.831136 | 1.98E-55 | -1.69E-46 |
| MS.gene052015 | MS.gene62850 | -0.802545 | 5.33E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene62850 | 0.871364 | 7.23E-67 | -1.69E-46 |
| MS.gene052482 | MS.gene62850 | 0.875923 | 2.10E-68 | -1.69E-46 |
| MS.gene052486 | MS.gene62850 | 0.888692 | 4.71E-73 | -1.69E-46 |
| MS.gene052501 | MS.gene62850 | 0.802671 | 5.02E-49 | -1.69E-46 |
| MS.gene052503 | MS.gene62850 | 0.866248 | 3.28E-65 | -1.69E-46 |
| MS.gene052504 | MS.gene62850 | 0.83177 | 1.38E-55 | -1.69E-46 |
| MS.gene052506 | MS.gene62850 | 0.855207 | 7.36E-62 | -1.69E-46 |
| MS.gene052605 | MS.gene62850 | 0.80323 | 3.85E-49 | -1.69E-46 |
| MS.gene052606 | MS.gene62850 | -0.808417 | 3.13E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene62850 | 0.84864 | 5.39E-60 | -1.69E-46 |
| MS.gene052670 | MS.gene62850 | 0.807491 | 4.93E-50 | -1.69E-46 |
| MS.gene052820 | MS.gene62850 | 0.826933 | 2.07E-54 | -1.69E-46 |
| MS.gene052822 | MS.gene62850 | 0.858786 | 6.48E-63 | -1.69E-46 |
| MS.gene052823 | MS.gene62850 | 0.862048 | 6.68E-64 | -1.69E-46 |
| MS.gene052825 | MS.gene62850 | 0.86261 | 4.49E-64 | -1.69E-46 |
| MS.gene052916 | MS.gene62850 | 0.813037 | 3.13E-51 | -1.69E-46 |
| MS.gene052966 | MS.gene62850 | 0.864921 | 8.59E-65 | -1.69E-46 |
| MS.gene053117 | MS.gene62850 | 0.811514 | 6.74E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene62850 | 0.892753 | 1.19E-74 | -1.69E-46 |
| MS.gene053207 | MS.gene62850 | 0.839861 | 1.23E-57 | -1.69E-46 |
| MS.gene053213 | MS.gene62850 | 0.891618 | 3.37E-74 | -1.69E-46 |
| MS.gene053284 | MS.gene62850 | 0.82798 | 1.16E-54 | -1.69E-46 |
| MS.gene053285 | MS.gene62850 | 0.816331 | 5.84E-52 | -1.69E-46 |
| MS.gene053286 | MS.gene62850 | 0.889608 | 2.08E-73 | -1.69E-46 |
| MS.gene053421 | MS.gene62850 | -0.829937 | 3.89E-55 | -1.69E-46 |
| MS.gene053436 | MS.gene62850 | 0.862052 | 6.66E-64 | -1.69E-46 |
| MS.gene053479 | MS.gene62850 | 0.846534 | 2.05E-59 | -1.69E-46 |
| MS.gene053480 | MS.gene62850 | 0.848017 | 8.01E-60 | -1.69E-46 |
| MS.gene053549 | MS.gene62850 | -0.812011 | 5.25E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene62850 | 0.852903 | 3.40E-61 | -1.69E-46 |
| MS.gene053579 | MS.gene62850 | 0.819922 | 9.01E-53 | -1.69E-46 |
| MS.gene053626 | MS.gene62850 | 0.840088 | 1.07E-57 | -1.69E-46 |
| MS.gene053632 | MS.gene62850 | 0.864685 | 1.02E-64 | -1.69E-46 |
| MS.gene053633 | MS.gene62850 | 0.80706 | 6.08E-50 | -1.69E-46 |
| MS.gene053824 | MS.gene62850 | 0.849813 | 2.54E-60 | -1.69E-46 |
| MS.gene053916 | MS.gene62850 | 0.82919 | 5.91E-55 | -1.69E-46 |
| MS.gene054003 | MS.gene62850 | 0.809487 | 1.85E-50 | -1.69E-46 |
| MS.gene054408 | MS.gene62850 | 0.847215 | 1.33E-59 | -1.69E-46 |
| MS.gene054595 | MS.gene62850 | 0.869534 | 2.88E-66 | -1.69E-46 |
| MS.gene054600 | MS.gene62850 | 0.882955 | 6.75E-71 | -1.69E-46 |
| MS.gene054638 | MS.gene62850 | 0.803299 | 3.72E-49 | -1.69E-46 |
| MS.gene054642 | MS.gene62850 | 0.884568 | 1.72E-71 | -1.69E-46 |
| MS.gene054706 | MS.gene62850 | -0.816305 | 5.92E-52 | -1.69E-46 |
| MS.gene05470 | MS.gene62850 | 0.90908 | 8.46E-82 | -1.69E-46 |
| MS.gene054927 | MS.gene62850 | 0.823097 | 1.66E-53 | -1.69E-46 |
| MS.gene054954 | MS.gene62850 | 0.902035 | 1.46E-78 | -1.69E-46 |
| MS.gene055154 | MS.gene62850 | -0.805243 | 1.47E-49 | -1.69E-46 |
| MS.gene055206 | MS.gene62850 | 0.83454 | 2.83E-56 | -1.69E-46 |
| MS.gene055224 | MS.gene62850 | 0.817468 | 3.25E-52 | -1.69E-46 |
| MS.gene055289 | MS.gene62850 | 0.806406 | 8.35E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene62850 | 0.912599 | 1.62E-83 | -1.69E-46 |
| MS.gene055502 | MS.gene62850 | 0.903471 | 3.35E-79 | -1.69E-46 |
| MS.gene055577 | MS.gene62850 | 0.909853 | 3.59E-82 | -1.69E-46 |
| MS.gene055647 | MS.gene62850 | 0.805497 | 1.30E-49 | -1.69E-46 |
| MS.gene055722 | MS.gene62850 | 0.82499 | 5.98E-54 | -1.69E-46 |
| MS.gene055748 | MS.gene62850 | 0.891391 | 4.15E-74 | -1.69E-46 |
| MS.gene055750 | MS.gene62850 | 0.885057 | 1.13E-71 | -1.69E-46 |
| MS.gene055751 | MS.gene62850 | 0.888194 | 7.33E-73 | -1.69E-46 |
| MS.gene055776 | MS.gene62850 | 0.837361 | 5.44E-57 | -1.69E-46 |
| MS.gene055849 | MS.gene62850 | 0.834577 | 2.77E-56 | -1.69E-46 |
| MS.gene05589 | MS.gene62850 | 0.868665 | 5.52E-66 | -1.69E-46 |
| MS.gene055941 | MS.gene62850 | 0.864409 | 1.24E-64 | -1.69E-46 |
| MS.gene056040 | MS.gene62850 | 0.827907 | 1.21E-54 | -1.69E-46 |
| MS.gene056046 | MS.gene62850 | 0.8125 | 4.11E-51 | -1.69E-46 |
| MS.gene056083 | MS.gene62850 | 0.834764 | 2.48E-56 | -1.69E-46 |
| MS.gene056374 | MS.gene62850 | 0.8644 | 1.25E-64 | -1.69E-46 |
| MS.gene056409 | MS.gene62850 | 0.846421 | 2.20E-59 | -1.69E-46 |
| MS.gene056450 | MS.gene62850 | 0.833286 | 5.82E-56 | -1.69E-46 |
| MS.gene056504 | MS.gene62850 | 0.898197 | 6.72E-77 | -1.69E-46 |
| MS.gene056510 | MS.gene62850 | 0.889377 | 2.56E-73 | -1.69E-46 |
| MS.gene056549 | MS.gene62850 | 0.834604 | 2.72E-56 | -1.69E-46 |
| MS.gene056550 | MS.gene62850 | -0.831438 | 1.67E-55 | -1.69E-46 |
| MS.gene056610 | MS.gene62850 | 0.878377 | 2.95E-69 | -1.69E-46 |
| MS.gene05664 | MS.gene62850 | 0.800947 | 1.13E-48 | -1.69E-46 |
| MS.gene056657 | MS.gene62850 | 0.893515 | 5.85E-75 | -1.69E-46 |
| MS.gene05666 | MS.gene62850 | 0.805072 | 1.59E-49 | -1.69E-46 |
| MS.gene056692 | MS.gene62850 | 0.904106 | 1.73E-79 | -1.69E-46 |
| MS.gene056878 | MS.gene62850 | 0.807593 | 4.69E-50 | -1.69E-46 |
| MS.gene056898 | MS.gene62850 | 0.821719 | 3.48E-53 | -1.69E-46 |
| MS.gene057086 | MS.gene62850 | 0.800136 | 1.66E-48 | -1.69E-46 |
| MS.gene057129 | MS.gene62850 | 0.810531 | 1.10E-50 | -1.69E-46 |
| MS.gene057331 | MS.gene62850 | 0.817165 | 3.80E-52 | -1.69E-46 |
| MS.gene057416 | MS.gene62850 | 0.868372 | 6.86E-66 | -1.69E-46 |
| MS.gene057658 | MS.gene62850 | 0.874848 | 4.90E-68 | -1.69E-46 |
| MS.gene057831 | MS.gene62850 | 0.910027 | 2.96E-82 | -1.69E-46 |
| MS.gene057857 | MS.gene62850 | 0.805422 | 1.34E-49 | -1.69E-46 |
| MS.gene05787 | MS.gene62850 | 0.825085 | 5.68E-54 | -1.69E-46 |
| MS.gene057986 | MS.gene62850 | 0.824519 | 7.73E-54 | -1.69E-46 |
| MS.gene058019 | MS.gene62850 | 0.835916 | 1.27E-56 | -1.69E-46 |
| MS.gene058111 | MS.gene62850 | -0.809833 | 1.56E-50 | -1.69E-46 |
| MS.gene058334 | MS.gene62850 | -0.862164 | 6.15E-64 | -1.69E-46 |
| MS.gene058335 | MS.gene62850 | 0.806346 | 8.60E-50 | -1.69E-46 |
| MS.gene058338 | MS.gene62850 | 0.815088 | 1.11E-51 | -1.69E-46 |
| MS.gene05837 | MS.gene62850 | 0.8703 | 1.62E-66 | -1.69E-46 |
| MS.gene058419 | MS.gene62850 | 0.911079 | 9.12E-83 | -1.69E-46 |
| MS.gene058544 | MS.gene62850 | 0.894436 | 2.47E-75 | -1.69E-46 |
| MS.gene058719 | MS.gene62850 | 0.816361 | 5.75E-52 | -1.69E-46 |
| MS.gene058723 | MS.gene62850 | 0.823623 | 1.25E-53 | -1.69E-46 |
| MS.gene058773 | MS.gene62850 | 0.890655 | 8.09E-74 | -1.69E-46 |
| MS.gene058838 | MS.gene62850 | 0.879338 | 1.35E-69 | -1.69E-46 |
| MS.gene05883 | MS.gene62850 | 0.821043 | 4.98E-53 | -1.69E-46 |
| MS.gene059022 | MS.gene62850 | 0.900776 | 5.22E-78 | -1.69E-46 |
| MS.gene059023 | MS.gene62850 | 0.900487 | 6.97E-78 | -1.69E-46 |
| MS.gene059079 | MS.gene62850 | 0.810658 | 1.03E-50 | -1.69E-46 |
| MS.gene059103 | MS.gene62850 | -0.817933 | 2.55E-52 | -1.69E-46 |
| MS.gene05912 | MS.gene62850 | 0.841272 | 5.25E-58 | -1.69E-46 |
| MS.gene05914 | MS.gene62850 | 0.826687 | 2.37E-54 | -1.69E-46 |
| MS.gene05934 | MS.gene62850 | 0.842008 | 3.36E-58 | -1.69E-46 |
| MS.gene059367 | MS.gene62850 | 0.802729 | 4.89E-49 | -1.69E-46 |
| MS.gene059479 | MS.gene62850 | -0.804634 | 1.97E-49 | -1.69E-46 |
| MS.gene059480 | MS.gene62850 | -0.815954 | 7.09E-52 | -1.69E-46 |
| MS.gene059526 | MS.gene62850 | -0.81964 | 1.04E-52 | -1.69E-46 |
| MS.gene059667 | MS.gene62850 | 0.814451 | 1.53E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene62850 | 0.916254 | 2.22E-85 | -1.69E-46 |
| MS.gene059718 | MS.gene62850 | 0.900844 | 4.87E-78 | -1.69E-46 |
| MS.gene059756 | MS.gene62850 | 0.879746 | 9.69E-70 | -1.69E-46 |
| MS.gene059801 | MS.gene62850 | 0.883546 | 4.10E-71 | -1.69E-46 |
| MS.gene059837 | MS.gene62850 | 0.853727 | 1.97E-61 | -1.69E-46 |
| MS.gene059865 | MS.gene62850 | 0.88446 | 1.88E-71 | -1.69E-46 |
| MS.gene059902 | MS.gene62850 | 0.832487 | 9.19E-56 | -1.69E-46 |
| MS.gene06000 | MS.gene62850 | 0.842279 | 2.85E-58 | -1.69E-46 |
| MS.gene060193 | MS.gene62850 | 0.821214 | 4.55E-53 | -1.69E-46 |
| MS.gene060482 | MS.gene62850 | 0.823515 | 1.33E-53 | -1.69E-46 |
| MS.gene060595 | MS.gene62850 | -0.833624 | 4.79E-56 | -1.69E-46 |
| MS.gene060703 | MS.gene62850 | 0.879806 | 9.22E-70 | -1.69E-46 |
| MS.gene060762 | MS.gene62850 | 0.902335 | 1.08E-78 | -1.69E-46 |
| MS.gene060778 | MS.gene62850 | 0.83897 | 2.09E-57 | -1.69E-46 |
| MS.gene06077 | MS.gene62850 | 0.913398 | 6.44E-84 | -1.69E-46 |
| MS.gene060823 | MS.gene62850 | -0.82279 | 1.96E-53 | -1.69E-46 |
| MS.gene06092 | MS.gene62850 | 0.877043 | 8.62E-69 | -1.69E-46 |
| MS.gene060982 | MS.gene62850 | 0.894044 | 3.57E-75 | -1.69E-46 |
| MS.gene061134 | MS.gene62850 | 0.804675 | 1.93E-49 | -1.69E-46 |
| MS.gene061150 | MS.gene62850 | 0.906854 | 9.50E-81 | -1.69E-46 |
| MS.gene061171 | MS.gene62850 | 0.813706 | 2.23E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene62850 | 0.808158 | 3.55E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62850.t1 | MTR_4g102000 | 97.193 | 285 | 8 | 0 | 1 | 285 | 36 | 320 | 0.0 | 575 |
| MS.gene62850.t1 | MTR_0002s0730 | 43.005 | 193 | 109 | 1 | 74 | 265 | 1 | 193 | 3.79e-51 | 167 |
| MS.gene62850.t1 | MTR_4g034690 | 37.306 | 193 | 120 | 1 | 74 | 265 | 1 | 193 | 1.45e-47 | 157 |
| MS.gene62850.t1 | MTR_7g109610 | 37.113 | 194 | 117 | 1 | 78 | 266 | 86 | 279 | 3.38e-41 | 144 |
| MS.gene62850.t1 | MTR_4g075100 | 33.333 | 240 | 148 | 5 | 49 | 282 | 4 | 237 | 3.62e-40 | 140 |
| MS.gene62850.t1 | MTR_1g086940 | 36.683 | 199 | 118 | 2 | 76 | 266 | 84 | 282 | 5.78e-40 | 141 |
| MS.gene62850.t1 | MTR_7g082980 | 36.126 | 191 | 122 | 0 | 91 | 281 | 75 | 265 | 1.05e-38 | 137 |
| MS.gene62850.t1 | MTR_5g026840 | 29.740 | 269 | 173 | 5 | 1 | 266 | 4 | 259 | 2.00e-36 | 132 |
| MS.gene62850.t1 | MTR_4g069800 | 33.333 | 183 | 118 | 1 | 85 | 267 | 93 | 271 | 7.87e-32 | 119 |
| MS.gene62850.t1 | MTR_4g069800 | 33.133 | 166 | 111 | 0 | 102 | 267 | 74 | 239 | 3.00e-29 | 111 |
| MS.gene62850.t1 | MTR_4g099360 | 35.638 | 188 | 113 | 1 | 95 | 274 | 104 | 291 | 3.54e-27 | 107 |
| MS.gene62850.t1 | MTR_4g069800 | 34.228 | 149 | 92 | 2 | 85 | 231 | 93 | 237 | 3.15e-24 | 98.2 |
| MS.gene62850.t1 | MTR_7g112640 | 31.746 | 189 | 116 | 4 | 104 | 279 | 119 | 307 | 6.03e-21 | 90.9 |
| MS.gene62850.t1 | MTR_1g106550 | 31.148 | 183 | 116 | 2 | 95 | 267 | 155 | 337 | 8.38e-21 | 91.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62850.t1 | AT1G12410 | 64.912 | 285 | 94 | 4 | 1 | 285 | 1 | 279 | 1.85e-135 | 384 |
| MS.gene62850.t1 | ATCG00670 | 41.451 | 193 | 112 | 1 | 74 | 265 | 1 | 193 | 4.71e-54 | 174 |
| MS.gene62850.t1 | AT5G23140 | 36.041 | 197 | 121 | 2 | 81 | 275 | 37 | 230 | 2.04e-42 | 145 |
| MS.gene62850.t1 | AT1G02560 | 41.916 | 167 | 97 | 0 | 100 | 266 | 119 | 285 | 7.51e-42 | 146 |
| MS.gene62850.t1 | AT5G45390 | 36.628 | 172 | 109 | 0 | 95 | 266 | 79 | 250 | 1.91e-36 | 132 |
| MS.gene62850.t1 | AT1G66670 | 34.031 | 191 | 111 | 4 | 82 | 266 | 75 | 256 | 4.84e-36 | 131 |
| MS.gene62850.t1 | AT4G17040 | 33.186 | 226 | 135 | 3 | 57 | 274 | 75 | 292 | 6.21e-36 | 130 |
| MS.gene62850.t1 | AT1G11750 | 34.682 | 173 | 113 | 0 | 94 | 266 | 95 | 267 | 1.99e-34 | 126 |
| MS.gene62850.t1 | AT1G11750 | 34.483 | 174 | 114 | 0 | 94 | 267 | 113 | 286 | 2.82e-34 | 126 |
| MS.gene62850.t1 | AT1G09130 | 32.787 | 183 | 112 | 2 | 95 | 266 | 121 | 303 | 4.35e-26 | 105 |
| MS.gene62850.t1 | AT1G09130 | 32.787 | 183 | 112 | 2 | 95 | 266 | 121 | 303 | 4.35e-26 | 105 |
| MS.gene62850.t1 | AT1G09130 | 32.787 | 183 | 112 | 2 | 95 | 266 | 121 | 303 | 1.18e-25 | 104 |
| MS.gene62850.t1 | AT1G49970 | 34.066 | 182 | 110 | 2 | 95 | 266 | 171 | 352 | 8.46e-23 | 97.1 |
Find 76 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATCAATGGGTTGATTTA+TGG | 0.126424 | 8.4:+22964131 | MS.gene62850:CDS |
| TTTGTGCCCTTACTGGTTTC+TGG | 0.139154 | 8.4:-22964051 | None:intergenic |
| TTAACAAGGTTCTCAATTTC+AGG | 0.184827 | 8.4:+22962978 | MS.gene62850:CDS |
| TTTCAATCCGGAGTAGATTT+TGG | 0.262983 | 8.4:-22962803 | None:intergenic |
| GCACAAGAGGCCCTTGACTA+TGG | 0.268943 | 8.4:+22966114 | MS.gene62850:CDS |
| ATCCGAATTTGTGCCCTTAC+TGG | 0.280153 | 8.4:-22964058 | None:intergenic |
| AAGCTCTACTTGTACATTAA+TGG | 0.307990 | 8.4:+22964442 | MS.gene62850:CDS |
| TCCTTCACCAGGTGTTCTAT+AGG | 0.314306 | 8.4:-22964107 | None:intergenic |
| AGAATTTAGCAATCAAATAT+TGG | 0.329049 | 8.4:+22964381 | MS.gene62850:CDS |
| AATGTACAAGTAGAGCTTCT+TGG | 0.334034 | 8.4:-22964437 | None:intergenic |
| CCTTCACCAGGTGTTCTATA+GGG | 0.336685 | 8.4:-22964106 | None:intergenic |
| GGGGTTGAAACGGTCGTGTA+GGG | 0.363041 | 8.4:-22962668 | None:intergenic |
| CCTCGCAAGGATGCTGGCTC+AGG | 0.377210 | 8.4:+22966183 | MS.gene62850:CDS |
| CCTATATGCACCCATTGTAT+AGG | 0.399844 | 8.4:+22964639 | MS.gene62850:CDS |
| TCTGAGTTGGCTAACAAAAC+AGG | 0.406372 | 8.4:+22965685 | MS.gene62850:CDS |
| GAGCAGCTCCTGCTGGAGAT+TGG | 0.410929 | 8.4:-22965493 | None:intergenic |
| GATGCACCTCGCAAGGATGC+TGG | 0.413454 | 8.4:+22966177 | MS.gene62850:CDS |
| AGCAGGAGCTGCTCGTGGTC+GGG | 0.415509 | 8.4:+22965502 | MS.gene62850:CDS |
| AACCAGTAAGGGCACAAATT+CGG | 0.415853 | 8.4:+22964056 | MS.gene62850:CDS |
| CATTGTATAGGCCAAGCTTA+TGG | 0.426540 | 8.4:+22964651 | MS.gene62850:CDS |
| GGGTTGAAACGGTCGTGTAG+GGG | 0.428860 | 8.4:-22962667 | None:intergenic |
| CCTATACAATGGGTGCATAT+AGG | 0.431234 | 8.4:-22964639 | None:intergenic |
| AGATCACCGAAGACTTGAAA+AGG | 0.434233 | 8.4:+22966076 | MS.gene62850:intron |
| AAATGGGCACACGTGAAGAT+TGG | 0.447978 | 8.4:-22962828 | None:intergenic |
| CGACCACGAGCAGCTCCTGC+TGG | 0.449924 | 8.4:-22965500 | None:intergenic |
| GGTTGAAACGGTCGTGTAGG+GGG | 0.450401 | 8.4:-22962666 | None:intergenic |
| CAGCAGGAGCTGCTCGTGGT+CGG | 0.460713 | 8.4:+22965501 | MS.gene62850:CDS |
| TACTTGTACATTAATGGTCC+TGG | 0.468494 | 8.4:+22964448 | MS.gene62850:CDS |
| GCAGCATTTCTACTTGCAGC+TGG | 0.472807 | 8.4:+22964678 | MS.gene62850:CDS |
| AGTGAACTGACCTTCTCAAC+AGG | 0.482520 | 8.4:-22965712 | None:intergenic |
| AAGGATGCTGGCTCAGGCAT+TGG | 0.507073 | 8.4:+22966189 | MS.gene62850:CDS |
| ATAAGCTTGGCCTATACAAT+GGG | 0.511333 | 8.4:-22964649 | None:intergenic |
| CTGGTGAAGGAACTTATCAA+TGG | 0.511648 | 8.4:+22964119 | MS.gene62850:CDS |
| CACAAGAGGCCCTTGACTAT+GGG | 0.513257 | 8.4:+22966115 | MS.gene62850:CDS |
| GGTGTTCTATAGGGCACTCT+AGG | 0.519447 | 8.4:-22964097 | None:intergenic |
| GGCTCATTGACAGAATTGTC+AGG | 0.528948 | 8.4:+22966136 | MS.gene62850:CDS |
| TGAAGATTGGAGTTTCAATC+CGG | 0.529739 | 8.4:-22962815 | None:intergenic |
| CATAAGCTTGGCCTATACAA+TGG | 0.531992 | 8.4:-22964650 | None:intergenic |
| CAAATTCGGATGATGCCCAT+TGG | 0.537610 | 8.4:+22964070 | MS.gene62850:CDS |
| TGGTGAAGGAACTTATCAAT+GGG | 0.547080 | 8.4:+22964120 | MS.gene62850:CDS |
| AACAGGCCAGCCTGTTGAGA+AGG | 0.549239 | 8.4:+22965702 | MS.gene62850:CDS |
| ATGCTAACCAGAAACCAGTA+AGG | 0.549654 | 8.4:+22964044 | MS.gene62850:CDS |
| CATTGATAAGTTCCTTCACC+AGG | 0.553758 | 8.4:-22964118 | None:intergenic |
| AAAAGCTGATGCACCTCGCA+AGG | 0.558743 | 8.4:+22966170 | MS.gene62850:CDS |
| CGAGAACGTGTTATCTTCAT+CGG | 0.562508 | 8.4:+22964343 | MS.gene62850:CDS |
| AACTGACCTTCTCAACAGGC+TGG | 0.565578 | 8.4:-22965708 | None:intergenic |
| GGGCACTCTAGGAGTTCCAA+TGG | 0.565955 | 8.4:-22964086 | None:intergenic |
| TCTACTTGCAGCTGGAGAGA+AGG | 0.566048 | 8.4:+22964686 | MS.gene62850:CDS |
| CCCGTGTTTATTCTCCTCCT+AGG | 0.566421 | 8.4:+22962690 | MS.gene62850:CDS |
| CCCTATAGAACACCTGGTGA+AGG | 0.567690 | 8.4:+22964106 | MS.gene62850:CDS |
| GATCACCGAAGACTTGAAAA+GGG | 0.568998 | 8.4:+22966077 | MS.gene62850:intron |
| TGTCAATGAGCCCATAGTCA+AGG | 0.569550 | 8.4:-22966125 | None:intergenic |
| ATGCTGCAAGACCATAAGCT+TGG | 0.573039 | 8.4:-22964662 | None:intergenic |
| CCTGAGCCAGCATCCTTGCG+AGG | 0.577721 | 8.4:-22966183 | None:intergenic |
| GTTTCCACCAAAATCTACTC+CGG | 0.585864 | 8.4:+22962796 | MS.gene62850:CDS |
| TCTCCAGCAGGAGCTGCTCG+TGG | 0.586081 | 8.4:+22965497 | MS.gene62850:CDS |
| TGGAGAACAATTCTTGCAAG+AGG | 0.588103 | 8.4:-22965473 | None:intergenic |
| GTCAATGAGCCCATAGTCAA+GGG | 0.588285 | 8.4:-22966124 | None:intergenic |
| TTGACAGAATTGTCAGGCCA+CGG | 0.588957 | 8.4:+22966142 | MS.gene62850:CDS |
| ATTGTTCTCCAATCTCCAGC+AGG | 0.591740 | 8.4:+22965485 | MS.gene62850:CDS |
| GGCACTCTAGGAGTTCCAAT+GGG | 0.595604 | 8.4:-22964085 | None:intergenic |
| TGTACATTAATGGTCCTGGT+GGG | 0.599482 | 8.4:+22964452 | MS.gene62850:CDS |
| AGAGTGCCCTATAGAACACC+TGG | 0.609227 | 8.4:+22964100 | MS.gene62850:CDS |
| AGGAGTCTGCAAGCTTTGCA+TGG | 0.619828 | 8.4:-22964619 | None:intergenic |
| ATTGTGTGAGATTACCTAGG+AGG | 0.620949 | 8.4:-22962704 | None:intergenic |
| AAAACGATTTGATGCACAAG+AGG | 0.623503 | 8.4:+22966101 | MS.gene62850:CDS |
| TTGTACATTAATGGTCCTGG+TGG | 0.642823 | 8.4:+22964451 | MS.gene62850:CDS |
| GTACATTAATGGTCCTGGTG+GGG | 0.651895 | 8.4:+22964453 | MS.gene62850:CDS |
| ACCTAGGAGGAGAATAAACA+CGG | 0.655551 | 8.4:-22962691 | None:intergenic |
| TCATTACTTACATCCCCACC+AGG | 0.676936 | 8.4:-22964466 | None:intergenic |
| TGCTAACCAGAAACCAGTAA+GGG | 0.683549 | 8.4:+22964045 | MS.gene62850:CDS |
| CCTAGGAGGAGAATAAACAC+GGG | 0.702649 | 8.4:-22962690 | None:intergenic |
| GTATCGTAGAGAGACATGCA+TGG | 0.715789 | 8.4:-22964597 | None:intergenic |
| CTAGGAGGAGAATAAACACG+GGG | 0.729198 | 8.4:-22962689 | None:intergenic |
| AGGAGGAGAATAAACACGGG+GGG | 0.747945 | 8.4:-22962687 | None:intergenic |
| TAGGAGGAGAATAAACACGG+GGG | 0.826083 | 8.4:-22962688 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGTTCTTGAAAAATATT+TGG | + | chr8.4:22965839-22965858 | MS.gene62850:intron | 15.0% |
| !! | AAATTGAATTGAAAAATTTG+TGG | - | chr8.4:22962733-22962752 | None:intergenic | 15.0% |
| !! | AAGAATGAAATTAAGAAAAT+GGG | - | chr8.4:22962847-22962866 | None:intergenic | 15.0% |
| !! | AATTGAATTGAAAAATTTGT+GGG | - | chr8.4:22962732-22962751 | None:intergenic | 15.0% |
| !! | CTATAAATATAATACATGTT+AGG | - | chr8.4:22965082-22965101 | None:intergenic | 15.0% |
| !!! | ACTCATTTTTTTAGAAAAAA+TGG | + | chr8.4:22963277-22963296 | MS.gene62850:intron | 15.0% |
| !!! | TAGAAAAAATGGATTTTTAT+GGG | + | chr8.4:22963288-22963307 | MS.gene62850:intron | 15.0% |
| !!! | TATGATTGGTATTTTTTTTA+AGG | + | chr8.4:22963634-22963653 | MS.gene62850:intron | 15.0% |
| !!! | TTAGAAAAAATGGATTTTTA+TGG | + | chr8.4:22963287-22963306 | MS.gene62850:intron | 15.0% |
| !! | AATATTAAACTAGAAACAAG+AGG | - | chr8.4:22964522-22964541 | None:intergenic | 20.0% |
| !! | AATCATAATATTTAACACCA+CGG | - | chr8.4:22963621-22963640 | None:intergenic | 20.0% |
| !! | AGAATTTAGCAATCAAATAT+TGG | + | chr8.4:22964381-22964400 | MS.gene62850:CDS | 20.0% |
| !! | GAAGAATGAAATTAAGAAAA+TGG | - | chr8.4:22962848-22962867 | None:intergenic | 20.0% |
| !! | GTAATATTCTGTTGTATTAA+GGG | + | chr8.4:22965434-22965453 | MS.gene62850:intron | 20.0% |
| !! | GTATGTTAAAATGAAAAAGT+TGG | + | chr8.4:22965156-22965175 | MS.gene62850:intron | 20.0% |
| !! | TAAAAAGATTTCCTACATTA+CGG | + | chr8.4:22964805-22964824 | MS.gene62850:intron | 20.0% |
| !! | TAAGTAATGATTCTAATGTT+TGG | + | chr8.4:22964479-22964498 | MS.gene62850:intron | 20.0% |
| !! | TACCTAAAAACATAAAAGTT+TGG | - | chr8.4:22964025-22964044 | None:intergenic | 20.0% |
| !! | TGTAATATTCTGTTGTATTA+AGG | + | chr8.4:22965433-22965452 | MS.gene62850:intron | 20.0% |
| !! | TTATATATAACCACAAAAGA+AGG | + | chr8.4:22965014-22965033 | MS.gene62850:intron | 20.0% |
| !!! | ATCTATTTTTTTCAACAACA+AGG | + | chr8.4:22963231-22963250 | MS.gene62850:intron | 20.0% |
| !!! | TCATAATGAGTTTTATTTAC+TGG | + | chr8.4:22966027-22966046 | MS.gene62850:intron | 20.0% |
| !!! | TCATTTTTAAGTGTTTGTTT+TGG | + | chr8.4:22963129-22963148 | MS.gene62850:intron | 20.0% |
| !!! | TTTTTTTGTTAATTTCCTGT+TGG | + | chr8.4:22963475-22963494 | MS.gene62850:intron | 20.0% |
| ! | AAAAAGATTTCCTACATTAC+GGG | + | chr8.4:22964806-22964825 | MS.gene62850:intron | 25.0% |
| ! | ATCAGCAAGTAATTGATTAT+GGG | + | chr8.4:22963044-22963063 | MS.gene62850:intron | 25.0% |
| ! | ATGATCCTTAATCATATTTG+TGG | - | chr8.4:22964941-22964960 | None:intergenic | 25.0% |
| ! | ATTCTCAATATAATCAAGGA+TGG | + | chr8.4:22964850-22964869 | MS.gene62850:intron | 25.0% |
| ! | TATCAGCAAGTAATTGATTA+TGG | + | chr8.4:22963043-22963062 | MS.gene62850:intron | 25.0% |
| ! | TCCTAAAATGAAAAGCTATT+AGG | + | chr8.4:22963192-22963211 | MS.gene62850:intron | 25.0% |
| ! | TGTGACATTCATTTCTAAAT+TGG | + | chr8.4:22965320-22965339 | MS.gene62850:intron | 25.0% |
| ! | TTGCATTCTCAATATAATCA+AGG | + | chr8.4:22964846-22964865 | MS.gene62850:intron | 25.0% |
| ! | TTTCCATAATTTCAAACTAC+CGG | - | chr8.4:22965187-22965206 | None:intergenic | 25.0% |
| !! | AAAGTACCTGAAATTGAAAA+CGG | - | chr8.4:22962908-22962927 | None:intergenic | 25.0% |
| !! | GAATTTAACTTCATCTACAA+AGG | - | chr8.4:22965869-22965888 | None:intergenic | 25.0% |
| !! | GTGGTGTTAAATATTATGAT+TGG | + | chr8.4:22963620-22963639 | MS.gene62850:intron | 25.0% |
| !! | TATTTGGAATAAGATTGTGA+TGG | - | chr8.4:22965272-22965291 | None:intergenic | 25.0% |
| !! | TCCTAATAGCTTTTCATTTT+AGG | - | chr8.4:22963196-22963215 | None:intergenic | 25.0% |
| !! | TGAAAGTATGGATTAAAACA+TGG | + | chr8.4:22963892-22963911 | MS.gene62850:intron | 25.0% |
| !! | TGCCAAACTTTTATGTTTTT+AGG | + | chr8.4:22964020-22964039 | MS.gene62850:intron | 25.0% |
| !!! | AATGTAAACTCTCAGTTTTT+TGG | + | chr8.4:22962950-22962969 | MS.gene62850:CDS | 25.0% |
| !!! | ATTATTATTTTCGGATTAGC+AGG | + | chr8.4:22963559-22963578 | MS.gene62850:intron | 25.0% |
| !!! | GTTTTAATCCATACTTTCAT+TGG | - | chr8.4:22963891-22963910 | None:intergenic | 25.0% |
| !!! | GTTTTTTGGTAAAGTTAACA+AGG | + | chr8.4:22962964-22962983 | MS.gene62850:CDS | 25.0% |
| !!! | TATTTTTTTCAACAACAAGG+AGG | + | chr8.4:22963234-22963253 | MS.gene62850:intron | 25.0% |
| !!! | TCACTTTAAAATGGAATTCA+TGG | + | chr8.4:22965730-22965749 | MS.gene62850:intron | 25.0% |
| !!! | TCTTAGAGTTCATTTTTTCA+TGG | + | chr8.4:22965987-22966006 | MS.gene62850:intron | 25.0% |
| !!! | TTTTCAATTTCAGGTACTTT+TGG | + | chr8.4:22962908-22962927 | MS.gene62850:intron | 25.0% |
| AAAACATGGTTTATGTCACT+TGG | + | chr8.4:22963906-22963925 | MS.gene62850:intron | 30.0% | |
| AAAAGACGAAAATAAACTCG+AGG | - | chr8.4:22964278-22964297 | None:intergenic | 30.0% | |
| AACATTGTGAAAACTCTTTC+AGG | + | chr8.4:22965606-22965625 | MS.gene62850:intron | 30.0% | |
| AAGCTCTACTTGTACATTAA+TGG | + | chr8.4:22964442-22964461 | MS.gene62850:CDS | 30.0% | |
| AAGTTAAACTTGTCATAGCA+CGG | + | chr8.4:22964747-22964766 | MS.gene62850:intron | 30.0% | |
| AAGTTGTATTAACAGACAGT+GGG | - | chr8.4:22964723-22964742 | None:intergenic | 30.0% | |
| AATGAAGCTTAGATATCGAA+AGG | - | chr8.4:22965928-22965947 | None:intergenic | 30.0% | |
| ATCCTTAATCATATTTGTGG+TGG | - | chr8.4:22964938-22964957 | None:intergenic | 30.0% | |
| ATGATCATTCATGACAGTTA+AGG | - | chr8.4:22965110-22965129 | None:intergenic | 30.0% | |
| CAAGATGTAACAACTTACAA+GGG | - | chr8.4:22964161-22964180 | None:intergenic | 30.0% | |
| CATACAGAGAAGAAGTTATT+TGG | - | chr8.4:22965816-22965835 | None:intergenic | 30.0% | |
| GTAATGATTCTAATGTTTGG+TGG | + | chr8.4:22964482-22964501 | MS.gene62850:intron | 30.0% | |
| GTATAAAGTCCATTCAACAA+AGG | - | chr8.4:22964876-22964895 | None:intergenic | 30.0% | |
| GTTAAAATGAAAAAGTTGGC+AGG | + | chr8.4:22965160-22965179 | MS.gene62850:intron | 30.0% | |
| TACATAGATATCTCTTCTGT+AGG | - | chr8.4:22964902-22964921 | None:intergenic | 30.0% | |
| TCAAGATGTAACAACTTACA+AGG | - | chr8.4:22964162-22964181 | None:intergenic | 30.0% | |
| TCCTTAATCATATTTGTGGT+GGG | - | chr8.4:22964937-22964956 | None:intergenic | 30.0% | |
| TGACATCTATCTCAGAAAAA+AGG | - | chr8.4:22965536-22965555 | None:intergenic | 30.0% | |
| TGTATAATACCAGTGACATA+GGG | - | chr8.4:22963422-22963441 | None:intergenic | 30.0% | |
| TTAAATAGCTGATCGTCAAA+AGG | - | chr8.4:22964545-22964564 | None:intergenic | 30.0% | |
| TTAACAAGGTTCTCAATTTC+AGG | + | chr8.4:22962978-22962997 | MS.gene62850:CDS | 30.0% | |
| TTCTTTGACCAATGAAAGTA+TGG | + | chr8.4:22963880-22963899 | MS.gene62850:intron | 30.0% | |
| ! | AAACATGGTTTATGTCACTT+GGG | + | chr8.4:22963907-22963926 | MS.gene62850:intron | 30.0% |
| ! | AAACTCATTTCCTTCTTTTG+TGG | - | chr8.4:22965027-22965046 | None:intergenic | 30.0% |
| ! | AAGGTCAGTTCACTTTAAAA+TGG | + | chr8.4:22965721-22965740 | MS.gene62850:intron | 30.0% |
| ! | AGATTATCTTTTCTCTGAGT+TGG | + | chr8.4:22965672-22965691 | MS.gene62850:CDS | 30.0% |
| ! | ATCACAAATGTAATTTTGCG+AGG | + | chr8.4:22963842-22963861 | MS.gene62850:intron | 30.0% |
| !! | CTTATCAATGGGTTGATTTA+TGG | + | chr8.4:22964131-22964150 | MS.gene62850:CDS | 30.0% |
| !! | GAACTCTAAGATACACAAAA+TGG | - | chr8.4:22965978-22965997 | None:intergenic | 30.0% |
| !!! | TTTTACCCTTTTCAAGTCTT+CGG | - | chr8.4:22966085-22966104 | None:intergenic | 30.0% |
| AAAACGATTTGATGCACAAG+AGG | + | chr8.4:22966101-22966120 | MS.gene62850:CDS | 35.0% | |
| AATGTACAAGTAGAGCTTCT+TGG | - | chr8.4:22964440-22964459 | None:intergenic | 35.0% | |
| AATGTCACAACAAAGCAGAA+TGG | - | chr8.4:22965309-22965328 | None:intergenic | 35.0% | |
| AGTCAAAGACTCAATACTAC+AGG | - | chr8.4:22965369-22965388 | None:intergenic | 35.0% | |
| AGTTAAACTTGTCATAGCAC+GGG | + | chr8.4:22964748-22964767 | MS.gene62850:intron | 35.0% | |
| ATAAGCTTGGCCTATACAAT+GGG | - | chr8.4:22964652-22964671 | None:intergenic | 35.0% | |
| ATCTATCTCAGAAAAAAGGC+AGG | - | chr8.4:22965532-22965551 | None:intergenic | 35.0% | |
| ATGATATTTGTCGCGAGAAA+TGG | + | chr8.4:22963660-22963679 | MS.gene62850:intron | 35.0% | |
| CAAGTTGTATTAACAGACAG+TGG | - | chr8.4:22964724-22964743 | None:intergenic | 35.0% | |
| CCTTAATCATATTTGTGGTG+GGG | - | chr8.4:22964936-22964955 | None:intergenic | 35.0% | |
| GTGTATAATACCAGTGACAT+AGG | - | chr8.4:22963423-22963442 | None:intergenic | 35.0% | |
| TAACTGATTAAGATCTCTCC+TGG | - | chr8.4:22963759-22963778 | None:intergenic | 35.0% | |
| TAATTAGTTGCTTCCCAAGA+GGG | + | chr8.4:22963725-22963744 | MS.gene62850:intron | 35.0% | |
| TACTTGTACATTAATGGTCC+TGG | + | chr8.4:22964448-22964467 | MS.gene62850:CDS | 35.0% | |
| TGAAGATTGGAGTTTCAATC+CGG | - | chr8.4:22962818-22962837 | None:intergenic | 35.0% | |
| TGATATTTGTCGCGAGAAAT+GGG | + | chr8.4:22963661-22963680 | MS.gene62850:intron | 35.0% | |
| TGGTGAAGGAACATAGTAAT+GGG | + | chr8.4:22964218-22964237 | MS.gene62850:intron | 35.0% | |
| TGGTGAAGGAACTTATCAAT+GGG | + | chr8.4:22964120-22964139 | MS.gene62850:CDS | 35.0% | |
| TTGTACGCTTATCTAAGAAC+TGG | + | chr8.4:22964198-22964217 | MS.gene62850:intron | 35.0% | |
| ! | AGGTTCTCAATTTCAGGTAA+TGG | + | chr8.4:22962984-22963003 | MS.gene62850:intron | 35.0% |
| ! | CATTCACCGTTTTCAATTTC+AGG | + | chr8.4:22962899-22962918 | MS.gene62850:intron | 35.0% |
| ! | GATACATTTTTCCTAGATGC+TGG | + | chr8.4:22963522-22963541 | MS.gene62850:intron | 35.0% |
| ! | GGTTCTCAATTTCAGGTAAT+GGG | + | chr8.4:22962985-22963004 | MS.gene62850:intron | 35.0% |
| ! | GTTACTTTATGACGTAGTCA+TGG | + | chr8.4:22964240-22964259 | MS.gene62850:intron | 35.0% |
| ! | TTGAGTCTTTGACTTCTCTA+AGG | + | chr8.4:22965375-22965394 | MS.gene62850:intron | 35.0% |
| ! | TTTCAATCCGGAGTAGATTT+TGG | - | chr8.4:22962806-22962825 | None:intergenic | 35.0% |
| ! | TTTTGGTGGAAACACTGAAA+TGG | - | chr8.4:22962789-22962808 | None:intergenic | 35.0% |
| !! | AATTTCAGGTAATGGGTTGT+GGG | + | chr8.4:22962992-22963011 | MS.gene62850:intron | 35.0% |
| !! | CAATTGACTCTGCTTTTACA+AGG | + | chr8.4:22965888-22965907 | MS.gene62850:intron | 35.0% |
| !! | CTTTAATTTGTGAGTCCTTC+AGG | + | chr8.4:22963780-22963799 | MS.gene62850:intron | 35.0% |
| AAGCAGAATGGAGTACAAAG+CGG | - | chr8.4:22965297-22965316 | None:intergenic | 40.0% | |
| AATGAAAAAGTTGGCAGGTC+CGG | + | chr8.4:22965165-22965184 | MS.gene62850:intron | 40.0% | |
| AATGATTGCTTCCAGCATCT+AGG | - | chr8.4:22963536-22963555 | None:intergenic | 40.0% | |
| ACATGTTAGGTACTCACCTT+TGG | - | chr8.4:22965069-22965088 | None:intergenic | 40.0% | |
| ACCTAGGAGGAGAATAAACA+CGG | - | chr8.4:22962694-22962713 | None:intergenic | 40.0% | |
| AGATCACCGAAGACTTGAAA+AGG | + | chr8.4:22966076-22966095 | MS.gene62850:intron | 40.0% | |
| ATGCTAACCAGAAACCAGTA+AGG | + | chr8.4:22964044-22964063 | MS.gene62850:CDS | 40.0% | |
| ATTGTGTGAGATTACCTAGG+AGG | - | chr8.4:22962707-22962726 | None:intergenic | 40.0% | |
| CATAAGCTTGGCCTATACAA+TGG | - | chr8.4:22964653-22964672 | None:intergenic | 40.0% | |
| CATTGATAAGTTCCTTCACC+AGG | - | chr8.4:22964121-22964140 | None:intergenic | 40.0% | |
| CATTGTATAGGCCAAGCTTA+TGG | + | chr8.4:22964651-22964670 | MS.gene62850:CDS | 40.0% | |
| CCCCACCACAAATATGATTA+AGG | + | chr8.4:22964933-22964952 | MS.gene62850:intron | 40.0% | |
| CCTATACAATGGGTGCATAT+AGG | - | chr8.4:22964642-22964661 | None:intergenic | 40.0% | |
| CCTATATGCACCCATTGTAT+AGG | + | chr8.4:22964639-22964658 | MS.gene62850:CDS | 40.0% | |
| CGAGAACGTGTTATCTTCAT+CGG | + | chr8.4:22964343-22964362 | MS.gene62850:CDS | 40.0% | |
| CTAATTAGTTGCTTCCCAAG+AGG | + | chr8.4:22963724-22963743 | MS.gene62850:intron | 40.0% | |
| CTGGTGAAGGAACATAGTAA+TGG | + | chr8.4:22964217-22964236 | MS.gene62850:intron | 40.0% | |
| CTGGTGAAGGAACTTATCAA+TGG | + | chr8.4:22964119-22964138 | MS.gene62850:CDS | 40.0% | |
| GAGATTGTGTGAGATTACCT+AGG | - | chr8.4:22962710-22962729 | None:intergenic | 40.0% | |
| GATCACCGAAGACTTGAAAA+GGG | + | chr8.4:22966077-22966096 | MS.gene62850:intron | 40.0% | |
| GCTTATCTAAGAACTGGTGA+AGG | + | chr8.4:22964204-22964223 | MS.gene62850:intron | 40.0% | |
| GGAGTACAAAGCGGAATATT+TGG | - | chr8.4:22965288-22965307 | None:intergenic | 40.0% | |
| GTTAAACTTGTCATAGCACG+GGG | + | chr8.4:22964749-22964768 | MS.gene62850:intron | 40.0% | |
| GTTTCCACCAAAATCTACTC+CGG | + | chr8.4:22962796-22962815 | MS.gene62850:CDS | 40.0% | |
| TCTTCGGTGATCTGAAGATA+TGG | - | chr8.4:22966069-22966088 | None:intergenic | 40.0% | |
| TGCTAACCAGAAACCAGTAA+GGG | + | chr8.4:22964045-22964064 | MS.gene62850:CDS | 40.0% | |
| TGGAGAACAATTCTTGCAAG+AGG | - | chr8.4:22965476-22965495 | None:intergenic | 40.0% | |
| TGTACATTAATGGTCCTGGT+GGG | + | chr8.4:22964452-22964471 | MS.gene62850:CDS | 40.0% | |
| TTGTACATTAATGGTCCTGG+TGG | + | chr8.4:22964451-22964470 | MS.gene62850:CDS | 40.0% | |
| ! | AACCAGTAAGGGCACAAATT+CGG | + | chr8.4:22964056-22964075 | MS.gene62850:CDS | 40.0% |
| ! | CAAAAGCATAAGTGGTAGCA+CGG | + | chr8.4:22963688-22963707 | MS.gene62850:intron | 40.0% |
| ! | CAATCGACAGTTGATATTGC+TGG | - | chr8.4:22965137-22965156 | None:intergenic | 40.0% |
| ! | GATTATGGGTGCGTTTGTTT+TGG | + | chr8.4:22963058-22963077 | MS.gene62850:intron | 40.0% |
| ! | GGTCCGGTAGTTTGAAATTA+TGG | + | chr8.4:22965181-22965200 | MS.gene62850:intron | 40.0% |
| ! | TCTGAGTTGGCTAACAAAAC+AGG | + | chr8.4:22965685-22965704 | MS.gene62850:CDS | 40.0% |
| !! | CAATTTCAGGTAATGGGTTG+TGG | + | chr8.4:22962991-22963010 | MS.gene62850:intron | 40.0% |
| AAATGGGCACACGTGAAGAT+TGG | - | chr8.4:22962831-22962850 | None:intergenic | 45.0% | |
| AGTGAACTGACCTTCTCAAC+AGG | - | chr8.4:22965715-22965734 | None:intergenic | 45.0% | |
| ATAAACACGGGGGGTTGAAA+CGG | - | chr8.4:22962681-22962700 | None:intergenic | 45.0% | |
| ATCCGAATTTGTGCCCTTAC+TGG | - | chr8.4:22964061-22964080 | None:intergenic | 45.0% | |
| ATGCTGCAAGACCATAAGCT+TGG | - | chr8.4:22964665-22964684 | None:intergenic | 45.0% | |
| ATTGTTCTCCAATCTCCAGC+AGG | + | chr8.4:22965485-22965504 | MS.gene62850:CDS | 45.0% | |
| CAAATTCGGATGATGCCCAT+TGG | + | chr8.4:22964070-22964089 | MS.gene62850:CDS | 45.0% | |
| CAAGGAGGTAACACATGTAC+AGG | + | chr8.4:22963249-22963268 | MS.gene62850:intron | 45.0% | |
| CAAGGATGGCCTTTGTTGAA+TGG | + | chr8.4:22964864-22964883 | MS.gene62850:intron | 45.0% | |
| CCATTGTGTTTGCATCCAAC+AGG | - | chr8.4:22963493-22963512 | None:intergenic | 45.0% | |
| CCTAGGAGGAGAATAAACAC+GGG | - | chr8.4:22962693-22962712 | None:intergenic | 45.0% | |
| CCTGTTGGATGCAAACACAA+TGG | + | chr8.4:22963490-22963509 | MS.gene62850:intron | 45.0% | |
| CCTTCACCAGGTGTTCTATA+GGG | - | chr8.4:22964109-22964128 | None:intergenic | 45.0% | |
| CTAGGAGGAGAATAAACACG+GGG | - | chr8.4:22962692-22962711 | None:intergenic | 45.0% | |
| GGCTCATTGACAGAATTGTC+AGG | + | chr8.4:22966136-22966155 | MS.gene62850:CDS | 45.0% | |
| GTACATTAATGGTCCTGGTG+GGG | + | chr8.4:22964453-22964472 | MS.gene62850:CDS | 45.0% | |
| GTATCGTAGAGAGACATGCA+TGG | - | chr8.4:22964600-22964619 | None:intergenic | 45.0% | |
| GTCAATGAGCCCATAGTCAA+GGG | - | chr8.4:22966127-22966146 | None:intergenic | 45.0% | |
| TAGGAGGAGAATAAACACGG+GGG | - | chr8.4:22962691-22962710 | None:intergenic | 45.0% | |
| TCATTACTTACATCCCCACC+AGG | - | chr8.4:22964469-22964488 | None:intergenic | 45.0% | |
| TCCTACATTACGGGACTGTA+CGG | + | chr8.4:22964815-22964834 | MS.gene62850:intron | 45.0% | |
| TCCTTCACCAGGTGTTCTAT+AGG | - | chr8.4:22964110-22964129 | None:intergenic | 45.0% | |
| TGATTAAGATCTCTCCTGGC+CGG | - | chr8.4:22963755-22963774 | None:intergenic | 45.0% | |
| TGTCAATGAGCCCATAGTCA+AGG | - | chr8.4:22966128-22966147 | None:intergenic | 45.0% | |
| TTCTCTACTTCTGTCGCCAA+AGG | + | chr8.4:22965050-22965069 | MS.gene62850:intron | 45.0% | |
| TTGACAGAATTGTCAGGCCA+CGG | + | chr8.4:22966142-22966161 | MS.gene62850:CDS | 45.0% | |
| TTGTCATAGCACGGGGTTTA+AGG | + | chr8.4:22964756-22964775 | MS.gene62850:intron | 45.0% | |
| ! | CAATCCGGAGTAGATTTTGG+TGG | - | chr8.4:22962803-22962822 | None:intergenic | 45.0% |
| ! | TGGGATCGCAAAAGCATAAG+TGG | + | chr8.4:22963680-22963699 | MS.gene62850:intron | 45.0% |
| !! | TTTGTGCCCTTACTGGTTTC+TGG | - | chr8.4:22964054-22964073 | None:intergenic | 45.0% |
| !!! | ATCATTATTATTATTATTTT+CGG | + | chr8.4:22963550-22963569 | MS.gene62850:intron | 5.0% |
| AAAAGCTGATGCACCTCGCA+AGG | + | chr8.4:22966170-22966189 | MS.gene62850:CDS | 50.0% | |
| AACCACGATCGTGTTCGTAG+AGG | + | chr8.4:22963590-22963609 | MS.gene62850:intron | 50.0% | |
| AACTGACCTTCTCAACAGGC+TGG | - | chr8.4:22965711-22965730 | None:intergenic | 50.0% | |
| ACAAACGCACCCTATGTCAC+TGG | + | chr8.4:22963410-22963429 | MS.gene62850:intron | 50.0% | |
| ACCGTACAGTCCCGTAATGT+AGG | - | chr8.4:22964819-22964838 | None:intergenic | 50.0% | |
| AGGAGGAGAATAAACACGGG+GGG | - | chr8.4:22962690-22962709 | None:intergenic | 50.0% | |
| AGGAGTCTGCAAGCTTTGCA+TGG | - | chr8.4:22964622-22964641 | None:intergenic | 50.0% | |
| CACAAGAGGCCCTTGACTAT+GGG | + | chr8.4:22966115-22966134 | MS.gene62850:CDS | 50.0% | |
| CACGACAAACTGTCTCCTGA+AGG | - | chr8.4:22963798-22963817 | None:intergenic | 50.0% | |
| CCCGTGTTTATTCTCCTCCT+AGG | + | chr8.4:22962690-22962709 | MS.gene62850:CDS | 50.0% | |
| CCCTATAGAACACCTGGTGA+AGG | + | chr8.4:22964106-22964125 | MS.gene62850:CDS | 50.0% | |
| GCAGCATTTCTACTTGCAGC+TGG | + | chr8.4:22964678-22964697 | MS.gene62850:CDS | 50.0% | |
| TCTACTTGCAGCTGGAGAGA+AGG | + | chr8.4:22964686-22964705 | MS.gene62850:CDS | 50.0% | |
| TGTTCGTAGAGGACAAACCG+TGG | + | chr8.4:22963601-22963620 | MS.gene62850:intron | 50.0% | |
| ! | AGAGTGCCCTATAGAACACC+TGG | + | chr8.4:22964100-22964119 | MS.gene62850:CDS | 50.0% |
| ! | GGCACTCTAGGAGTTCCAAT+GGG | - | chr8.4:22964088-22964107 | None:intergenic | 50.0% |
| ! | GGTGTTCTATAGGGCACTCT+AGG | - | chr8.4:22964100-22964119 | None:intergenic | 50.0% |
| ! | TGCTTCCCAAGAGGGTTTTC+CGG | + | chr8.4:22963733-22963752 | MS.gene62850:intron | 50.0% |
| AACAGGCCAGCCTGTTGAGA+AGG | + | chr8.4:22965702-22965721 | MS.gene62850:CDS | 55.0% | |
| GCACAAGAGGCCCTTGACTA+TGG | + | chr8.4:22966114-22966133 | MS.gene62850:CDS | 55.0% | |
| GGGGTTGAAACGGTCGTGTA+GGG | - | chr8.4:22962671-22962690 | None:intergenic | 55.0% | |
| GGGTTGAAACGGTCGTGTAG+GGG | - | chr8.4:22962670-22962689 | None:intergenic | 55.0% | |
| GGTTGAAACGGTCGTGTAGG+GGG | - | chr8.4:22962669-22962688 | None:intergenic | 55.0% | |
| GTCCTCTACGAACACGATCG+TGG | - | chr8.4:22963595-22963614 | None:intergenic | 55.0% | |
| ! | GCATCAGCTTTTATGCGCCG+TGG | - | chr8.4:22966162-22966181 | None:intergenic | 55.0% |
| ! | GGGCACTCTAGGAGTTCCAA+TGG | - | chr8.4:22964089-22964108 | None:intergenic | 55.0% |
| !! | AAGGATGCTGGCTCAGGCAT+TGG | + | chr8.4:22966189-22966208 | MS.gene62850:CDS | 55.0% |
| CCTGGCCGGAAAACCCTCTT+GGG | - | chr8.4:22963741-22963760 | None:intergenic | 60.0% | |
| GAGCAGCTCCTGCTGGAGAT+TGG | - | chr8.4:22965496-22965515 | None:intergenic | 60.0% | |
| GATGCACCTCGCAAGGATGC+TGG | + | chr8.4:22966177-22966196 | MS.gene62850:CDS | 60.0% | |
| GGGGGTTGAAACGGTCGTGT+AGG | - | chr8.4:22962672-22962691 | None:intergenic | 60.0% | |
| TCCTGGCCGGAAAACCCTCT+TGG | - | chr8.4:22963742-22963761 | None:intergenic | 60.0% | |
| AGCAGGAGCTGCTCGTGGTC+GGG | + | chr8.4:22965502-22965521 | MS.gene62850:CDS | 65.0% | |
| CAGCAGGAGCTGCTCGTGGT+CGG | + | chr8.4:22965501-22965520 | MS.gene62850:CDS | 65.0% | |
| CCTGAGCCAGCATCCTTGCG+AGG | - | chr8.4:22966186-22966205 | None:intergenic | 65.0% | |
| TCTCCAGCAGGAGCTGCTCG+TGG | + | chr8.4:22965497-22965516 | MS.gene62850:CDS | 65.0% | |
| ! | CCCAAGAGGGTTTTCCGGCC+AGG | + | chr8.4:22963738-22963757 | MS.gene62850:intron | 65.0% |
| !! | CCTCGCAAGGATGCTGGCTC+AGG | + | chr8.4:22966183-22966202 | MS.gene62850:CDS | 65.0% |
| CGACCACGAGCAGCTCCTGC+TGG | - | chr8.4:22965503-22965522 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 22962656 | 22966215 | 22962656 | ID=MS.gene62850 |
| chr8.4 | mRNA | 22962656 | 22966215 | 22962656 | ID=MS.gene62850.t1;Parent=MS.gene62850 |
| chr8.4 | exon | 22962656 | 22962711 | 22962656 | ID=MS.gene62850.t1.exon1;Parent=MS.gene62850.t1 |
| chr8.4 | CDS | 22962656 | 22962711 | 22962656 | ID=cds.MS.gene62850.t1;Parent=MS.gene62850.t1 |
| chr8.4 | exon | 22962795 | 22962838 | 22962795 | ID=MS.gene62850.t1.exon2;Parent=MS.gene62850.t1 |
| chr8.4 | CDS | 22962795 | 22962838 | 22962795 | ID=cds.MS.gene62850.t1;Parent=MS.gene62850.t1 |
| chr8.4 | exon | 22962921 | 22962999 | 22962921 | ID=MS.gene62850.t1.exon3;Parent=MS.gene62850.t1 |
| chr8.4 | CDS | 22962921 | 22962999 | 22962921 | ID=cds.MS.gene62850.t1;Parent=MS.gene62850.t1 |
| chr8.4 | exon | 22964042 | 22964162 | 22964042 | ID=MS.gene62850.t1.exon4;Parent=MS.gene62850.t1 |
| chr8.4 | CDS | 22964042 | 22964162 | 22964042 | ID=cds.MS.gene62850.t1;Parent=MS.gene62850.t1 |
| chr8.4 | exon | 22964340 | 22964477 | 22964340 | ID=MS.gene62850.t1.exon5;Parent=MS.gene62850.t1 |
| chr8.4 | CDS | 22964340 | 22964477 | 22964340 | ID=cds.MS.gene62850.t1;Parent=MS.gene62850.t1 |
| chr8.4 | exon | 22964591 | 22964707 | 22964591 | ID=MS.gene62850.t1.exon6;Parent=MS.gene62850.t1 |
| chr8.4 | CDS | 22964591 | 22964707 | 22964591 | ID=cds.MS.gene62850.t1;Parent=MS.gene62850.t1 |
| chr8.4 | exon | 22965455 | 22965523 | 22965455 | ID=MS.gene62850.t1.exon7;Parent=MS.gene62850.t1 |
| chr8.4 | CDS | 22965455 | 22965523 | 22965455 | ID=cds.MS.gene62850.t1;Parent=MS.gene62850.t1 |
| chr8.4 | exon | 22965628 | 22965723 | 22965628 | ID=MS.gene62850.t1.exon8;Parent=MS.gene62850.t1 |
| chr8.4 | CDS | 22965628 | 22965723 | 22965628 | ID=cds.MS.gene62850.t1;Parent=MS.gene62850.t1 |
| chr8.4 | exon | 22966078 | 22966215 | 22966078 | ID=MS.gene62850.t1.exon9;Parent=MS.gene62850.t1 |
| chr8.4 | CDS | 22966078 | 22966215 | 22966078 | ID=cds.MS.gene62850.t1;Parent=MS.gene62850.t1 |
| Gene Sequence |
| Protein sequence |
