AlfalfaGEDB | MS.gene52273

M. sativa cultivar XinJiangDaYe / MS.gene52273

KEGG: K08738
GO: GO:0003674 GO:0003824 GO:0005488 GO:0009055 GO:0016491 GO:0020037 GO:0046906 GO:0048037 GO:0097159 GO:1901363
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene52273.t1	XP_013449383.1	92.7	109	5	2	1	108	1	107	6.40E-50	206.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene52273.t1	Q9T0G2	68.2	110	31	3	1	108	1	108	9.4e-34	144.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene52273.t1	A2Q5Y1	92.7	109	5	2	1	108	1	107	4.6e-50	206.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049137	MS.gene52273	0.871207	8.15E-67	-1.69E-46
MS.gene049171	MS.gene52273	0.945574	2.37E-104	-1.69E-46
MS.gene049173	MS.gene52273	0.850906	1.25E-60	-1.69E-46
MS.gene049217	MS.gene52273	0.88288	7.18E-71	-1.69E-46
MS.gene049222	MS.gene52273	0.920007	2.20E-87	-1.69E-46
MS.gene049232	MS.gene52273	0.847153	1.38E-59	-1.69E-46
MS.gene049281	MS.gene52273	-0.821115	4.79E-53	-1.69E-46
MS.gene049285	MS.gene52273	0.930693	1.13E-93	-1.69E-46
MS.gene049312	MS.gene52273	-0.817593	3.04E-52	-1.69E-46
MS.gene049320	MS.gene52273	0.928193	4.08E-92	-1.69E-46
MS.gene04939	MS.gene52273	0.824742	6.84E-54	-1.69E-46
MS.gene049427	MS.gene52273	0.821095	4.85E-53	-1.69E-46
MS.gene049609	MS.gene52273	0.910438	1.87E-82	-1.69E-46
MS.gene049611	MS.gene52273	-0.811602	6.45E-51	-1.69E-46
MS.gene049627	MS.gene52273	0.85065	1.48E-60	-1.69E-46
MS.gene049633	MS.gene52273	0.889116	3.23E-73	-1.69E-46
MS.gene049805	MS.gene52273	0.882922	6.94E-71	-1.69E-46
MS.gene05010	MS.gene52273	0.878537	2.59E-69	-1.69E-46
MS.gene050163	MS.gene52273	0.907325	5.73E-81	-1.69E-46
MS.gene050165	MS.gene52273	0.895335	1.06E-75	-1.69E-46
MS.gene050170	MS.gene52273	0.877584	5.59E-69	-1.69E-46
MS.gene050323	MS.gene52273	0.864291	1.35E-64	-1.69E-46
MS.gene050333	MS.gene52273	0.873488	1.41E-67	-1.69E-46
MS.gene050381	MS.gene52273	-0.849029	4.20E-60	-1.69E-46
MS.gene050444	MS.gene52273	0.847711	9.73E-60	-1.69E-46
MS.gene050479	MS.gene52273	-0.816557	5.20E-52	-1.69E-46
MS.gene050496	MS.gene52273	0.850485	1.65E-60	-1.69E-46
MS.gene050504	MS.gene52273	0.929189	9.93E-93	-1.69E-46
MS.gene050518	MS.gene52273	0.902407	1.00E-78	-1.69E-46
MS.gene050538	MS.gene52273	0.863676	2.10E-64	-1.69E-46
MS.gene050547	MS.gene52273	-0.829141	6.08E-55	-1.69E-46
MS.gene050577	MS.gene52273	0.93108	6.40E-94	-1.69E-46
MS.gene050593	MS.gene52273	0.848572	5.63E-60	-1.69E-46
MS.gene050612	MS.gene52273	0.91776	3.58E-86	-1.69E-46
MS.gene050647	MS.gene52273	-0.8139	2.03E-51	-1.69E-46
MS.gene050662	MS.gene52273	0.810033	1.41E-50	-1.69E-46
MS.gene050675	MS.gene52273	0.883956	2.89E-71	-1.69E-46
MS.gene050690	MS.gene52273	0.817249	3.64E-52	-1.69E-46
MS.gene050699	MS.gene52273	0.930431	1.66E-93	-1.69E-46
MS.gene050747	MS.gene52273	0.919011	7.67E-87	-1.69E-46
MS.gene050772	MS.gene52273	0.909775	3.92E-82	-1.69E-46
MS.gene050781	MS.gene52273	0.828336	9.51E-55	-1.69E-46
MS.gene05080	MS.gene52273	0.892902	1.03E-74	-1.69E-46
MS.gene05081	MS.gene52273	0.839691	1.36E-57	-1.69E-46
MS.gene050833	MS.gene52273	-0.802691	4.97E-49	-1.69E-46
MS.gene050868	MS.gene52273	0.884185	2.38E-71	-1.69E-46
MS.gene050871	MS.gene52273	0.881457	2.36E-70	-1.69E-46
MS.gene050876	MS.gene52273	0.805831	1.10E-49	-1.69E-46
MS.gene050883	MS.gene52273	-0.821556	3.79E-53	-1.69E-46
MS.gene050904	MS.gene52273	0.849402	3.31E-60	-1.69E-46
MS.gene050937	MS.gene52273	-0.805875	1.08E-49	-1.69E-46
MS.gene050950	MS.gene52273	0.912695	1.45E-83	-1.69E-46
MS.gene050986	MS.gene52273	0.898855	3.52E-77	-1.69E-46
MS.gene05100	MS.gene52273	0.892198	1.98E-74	-1.69E-46
MS.gene051044	MS.gene52273	-0.804422	2.18E-49	-1.69E-46
MS.gene05104	MS.gene52273	-0.823453	1.37E-53	-1.69E-46
MS.gene05105	MS.gene52273	0.80371	3.06E-49	-1.69E-46
MS.gene051127	MS.gene52273	-0.81736	3.43E-52	-1.69E-46
MS.gene051138	MS.gene52273	-0.810551	1.09E-50	-1.69E-46
MS.gene051167	MS.gene52273	-0.840925	6.48E-58	-1.69E-46
MS.gene051228	MS.gene52273	0.812404	4.31E-51	-1.69E-46
MS.gene051268	MS.gene52273	0.821033	5.01E-53	-1.69E-46
MS.gene051317	MS.gene52273	0.878799	2.10E-69	-1.69E-46
MS.gene051336	MS.gene52273	0.804076	2.57E-49	-1.69E-46
MS.gene051364	MS.gene52273	-0.821015	5.06E-53	-1.69E-46
MS.gene051366	MS.gene52273	-0.815124	1.09E-51	-1.69E-46
MS.gene051387	MS.gene52273	0.817705	2.87E-52	-1.69E-46
MS.gene051438	MS.gene52273	0.815952	7.10E-52	-1.69E-46
MS.gene051551	MS.gene52273	0.890579	8.68E-74	-1.69E-46
MS.gene051651	MS.gene52273	-0.815953	7.10E-52	-1.69E-46
MS.gene051666	MS.gene52273	0.885033	1.15E-71	-1.69E-46
MS.gene051694	MS.gene52273	0.865174	7.15E-65	-1.69E-46
MS.gene051810	MS.gene52273	0.876243	1.63E-68	-1.69E-46
MS.gene051838	MS.gene52273	0.877063	8.49E-69	-1.69E-46
MS.gene051858	MS.gene52273	0.862617	4.46E-64	-1.69E-46
MS.gene051874	MS.gene52273	0.802699	4.96E-49	-1.69E-46
MS.gene051946	MS.gene52273	-0.812761	3.60E-51	-1.69E-46
MS.gene051949	MS.gene52273	0.838765	2.37E-57	-1.69E-46
MS.gene051973	MS.gene52273	-0.809208	2.12E-50	-1.69E-46
MS.gene052015	MS.gene52273	-0.830431	2.95E-55	-1.69E-46
MS.gene052129	MS.gene52273	-0.810503	1.12E-50	-1.69E-46
MS.gene052164	MS.gene52273	0.90846	1.67E-81	-1.69E-46
MS.gene052271	MS.gene52273	0.831955	1.24E-55	-1.69E-46
MS.gene052379	MS.gene52273	0.840915	6.52E-58	-1.69E-46
MS.gene05240	MS.gene52273	-0.812077	5.08E-51	-1.69E-46
MS.gene052421	MS.gene52273	0.811745	6.00E-51	-1.69E-46
MS.gene052482	MS.gene52273	0.878681	2.31E-69	-1.69E-46
MS.gene052486	MS.gene52273	0.878634	2.40E-69	-1.69E-46
MS.gene052494	MS.gene52273	-0.802322	5.93E-49	-1.69E-46
MS.gene052501	MS.gene52273	0.857724	1.34E-62	-1.69E-46
MS.gene052503	MS.gene52273	0.90584	2.80E-80	-1.69E-46
MS.gene052504	MS.gene52273	0.812072	5.10E-51	-1.69E-46
MS.gene052505	MS.gene52273	0.839505	1.52E-57	-1.69E-46
MS.gene052506	MS.gene52273	0.87021	1.73E-66	-1.69E-46
MS.gene052606	MS.gene52273	-0.819414	1.18E-52	-1.69E-46
MS.gene052615	MS.gene52273	0.899598	1.69E-77	-1.69E-46
MS.gene052670	MS.gene52273	0.817135	3.86E-52	-1.69E-46
MS.gene052820	MS.gene52273	0.813274	2.78E-51	-1.69E-46
MS.gene052822	MS.gene52273	0.866016	3.88E-65	-1.69E-46
MS.gene052823	MS.gene52273	0.899193	2.53E-77	-1.69E-46
MS.gene052825	MS.gene52273	0.900114	1.01E-77	-1.69E-46
MS.gene052870	MS.gene52273	0.825405	4.77E-54	-1.69E-46
MS.gene052872	MS.gene52273	0.840742	7.24E-58	-1.69E-46
MS.gene052916	MS.gene52273	0.843704	1.19E-58	-1.69E-46
MS.gene052966	MS.gene52273	0.854301	1.35E-61	-1.69E-46
MS.gene052982	MS.gene52273	0.826667	2.39E-54	-1.69E-46
MS.gene052986	MS.gene52273	0.813329	2.70E-51	-1.69E-46
MS.gene052987	MS.gene52273	0.812049	5.15E-51	-1.69E-46
MS.gene053009	MS.gene52273	0.8275	1.51E-54	-1.69E-46
MS.gene053103	MS.gene52273	0.806672	7.34E-50	-1.69E-46
MS.gene053104	MS.gene52273	0.835108	2.03E-56	-1.69E-46
MS.gene053107	MS.gene52273	0.803709	3.06E-49	-1.69E-46
MS.gene053117	MS.gene52273	0.812437	4.24E-51	-1.69E-46
MS.gene053203	MS.gene52273	0.921186	4.94E-88	-1.69E-46
MS.gene053207	MS.gene52273	0.887596	1.24E-72	-1.69E-46
MS.gene053213	MS.gene52273	0.919036	7.43E-87	-1.69E-46
MS.gene053284	MS.gene52273	0.800863	1.18E-48	-1.69E-46
MS.gene053286	MS.gene52273	0.917566	4.54E-86	-1.69E-46
MS.gene053322	MS.gene52273	0.844393	7.77E-59	-1.69E-46
MS.gene053420	MS.gene52273	-0.826975	2.02E-54	-1.69E-46
MS.gene053421	MS.gene52273	-0.831372	1.73E-55	-1.69E-46
MS.gene053436	MS.gene52273	0.898304	6.05E-77	-1.69E-46
MS.gene053479	MS.gene52273	0.858131	1.02E-62	-1.69E-46
MS.gene053480	MS.gene52273	0.862558	4.66E-64	-1.69E-46
MS.gene053549	MS.gene52273	-0.819251	1.28E-52	-1.69E-46
MS.gene053574	MS.gene52273	0.904328	1.38E-79	-1.69E-46
MS.gene053579	MS.gene52273	0.842357	2.72E-58	-1.69E-46
MS.gene053626	MS.gene52273	0.861903	7.40E-64	-1.69E-46
MS.gene053632	MS.gene52273	0.919608	3.64E-87	-1.69E-46
MS.gene053824	MS.gene52273	0.875929	2.09E-68	-1.69E-46
MS.gene053916	MS.gene52273	0.855935	4.52E-62	-1.69E-46
MS.gene054003	MS.gene52273	0.838886	2.20E-57	-1.69E-46
MS.gene054408	MS.gene52273	0.884077	2.61E-71	-1.69E-46
MS.gene054595	MS.gene52273	0.885892	5.49E-72	-1.69E-46
MS.gene054600	MS.gene52273	0.902886	6.13E-79	-1.69E-46
MS.gene054642	MS.gene52273	0.920212	1.70E-87	-1.69E-46
MS.gene054706	MS.gene52273	-0.86952	2.91E-66	-1.69E-46
MS.gene054708	MS.gene52273	-0.807137	5.85E-50	-1.69E-46
MS.gene05470	MS.gene52273	0.928298	3.52E-92	-1.69E-46
MS.gene054742	MS.gene52273	-0.803679	3.11E-49	-1.69E-46
MS.gene054884	MS.gene52273	-0.817309	3.53E-52	-1.69E-46
MS.gene054927	MS.gene52273	0.883173	5.61E-71	-1.69E-46
MS.gene054954	MS.gene52273	0.919628	3.55E-87	-1.69E-46
MS.gene054959	MS.gene52273	-0.825845	3.75E-54	-1.69E-46
MS.gene05505	MS.gene52273	0.835278	1.84E-56	-1.69E-46
MS.gene055154	MS.gene52273	-0.845759	3.32E-59	-1.69E-46
MS.gene055206	MS.gene52273	0.885398	8.41E-72	-1.69E-46
MS.gene055212	MS.gene52273	0.829667	4.53E-55	-1.69E-46
MS.gene055224	MS.gene52273	0.829048	6.40E-55	-1.69E-46
MS.gene055289	MS.gene52273	0.875051	4.18E-68	-1.69E-46
MS.gene055362	MS.gene52273	0.936741	1.07E-97	-1.69E-46
MS.gene055499	MS.gene52273	0.822493	2.30E-53	-1.69E-46
MS.gene055502	MS.gene52273	0.936915	8.07E-98	-1.69E-46
MS.gene055577	MS.gene52273	0.914075	2.93E-84	-1.69E-46
MS.gene055629	MS.gene52273	0.842152	3.08E-58	-1.69E-46
MS.gene055647	MS.gene52273	0.820979	5.15E-53	-1.69E-46
MS.gene055722	MS.gene52273	0.866646	2.45E-65	-1.69E-46
MS.gene055731	MS.gene52273	-0.802067	6.69E-49	-1.69E-46
MS.gene055748	MS.gene52273	0.892467	1.55E-74	-1.69E-46
MS.gene055750	MS.gene52273	0.871303	7.57E-67	-1.69E-46
MS.gene055751	MS.gene52273	0.879915	8.44E-70	-1.69E-46
MS.gene055776	MS.gene52273	0.840928	6.47E-58	-1.69E-46
MS.gene05589	MS.gene52273	0.892661	1.29E-74	-1.69E-46
MS.gene05592	MS.gene52273	0.828632	8.07E-55	-1.69E-46
MS.gene055941	MS.gene52273	0.86587	4.31E-65	-1.69E-46
MS.gene055956	MS.gene52273	-0.82045	6.82E-53	-1.69E-46
MS.gene056040	MS.gene52273	0.853488	2.31E-61	-1.69E-46
MS.gene056046	MS.gene52273	0.825926	3.59E-54	-1.69E-46
MS.gene056083	MS.gene52273	0.882475	1.01E-70	-1.69E-46
MS.gene056166	MS.gene52273	0.828941	6.79E-55	-1.69E-46
MS.gene056224	MS.gene52273	-0.800915	1.15E-48	-1.69E-46
MS.gene056374	MS.gene52273	0.8771	8.24E-69	-1.69E-46
MS.gene056409	MS.gene52273	0.829753	4.31E-55	-1.69E-46
MS.gene056446	MS.gene52273	0.845605	3.66E-59	-1.69E-46
MS.gene056449	MS.gene52273	0.80731	5.38E-50	-1.69E-46
MS.gene056487	MS.gene52273	0.80125	9.84E-49	-1.69E-46
MS.gene056504	MS.gene52273	0.904566	1.07E-79	-1.69E-46
MS.gene056510	MS.gene52273	0.906206	1.90E-80	-1.69E-46
MS.gene056549	MS.gene52273	0.802855	4.60E-49	-1.69E-46
MS.gene056550	MS.gene52273	-0.851782	7.09E-61	-1.69E-46
MS.gene056590	MS.gene52273	-0.811816	5.79E-51	-1.69E-46
MS.gene056591	MS.gene52273	-0.814358	1.60E-51	-1.69E-46
MS.gene056610	MS.gene52273	0.867893	9.78E-66	-1.69E-46
MS.gene056657	MS.gene52273	0.917286	6.39E-86	-1.69E-46
MS.gene05666	MS.gene52273	0.80041	1.46E-48	-1.69E-46
MS.gene056692	MS.gene52273	0.895029	1.41E-75	-1.69E-46
MS.gene056748	MS.gene52273	-0.803417	3.52E-49	-1.69E-46
MS.gene056856	MS.gene52273	-0.818251	2.16E-52	-1.69E-46
MS.gene056898	MS.gene52273	0.831212	1.90E-55	-1.69E-46
MS.gene056946	MS.gene52273	0.823725	1.19E-53	-1.69E-46
MS.gene057011	MS.gene52273	0.808792	2.60E-50	-1.69E-46
MS.gene057014	MS.gene52273	-0.820064	8.36E-53	-1.69E-46
MS.gene057048	MS.gene52273	0.846569	2.00E-59	-1.69E-46
MS.gene057076	MS.gene52273	0.833373	5.54E-56	-1.69E-46
MS.gene057086	MS.gene52273	0.81716	3.81E-52	-1.69E-46
MS.gene057129	MS.gene52273	0.853527	2.25E-61	-1.69E-46
MS.gene057146	MS.gene52273	0.813181	2.92E-51	-1.69E-46
MS.gene057196	MS.gene52273	0.829345	5.42E-55	-1.69E-46
MS.gene057261	MS.gene52273	-0.804633	1.97E-49	-1.69E-46
MS.gene057331	MS.gene52273	0.842113	3.15E-58	-1.69E-46
MS.gene057332	MS.gene52273	0.822764	1.99E-53	-1.69E-46
MS.gene057416	MS.gene52273	0.905858	2.75E-80	-1.69E-46
MS.gene05753	MS.gene52273	0.805383	1.37E-49	-1.69E-46
MS.gene057658	MS.gene52273	0.903196	4.45E-79	-1.69E-46
MS.gene057734	MS.gene52273	0.813785	2.15E-51	-1.69E-46
MS.gene057831	MS.gene52273	0.895044	1.39E-75	-1.69E-46
MS.gene057856	MS.gene52273	0.817461	3.26E-52	-1.69E-46
MS.gene057857	MS.gene52273	0.810817	9.55E-51	-1.69E-46
MS.gene05787	MS.gene52273	0.846571	2.00E-59	-1.69E-46
MS.gene058019	MS.gene52273	0.840377	9.02E-58	-1.69E-46
MS.gene058117	MS.gene52273	-0.801874	7.33E-49	-1.69E-46
MS.gene058130	MS.gene52273	0.861464	1.01E-63	-1.69E-46
MS.gene058157	MS.gene52273	0.822759	1.99E-53	-1.69E-46
MS.gene058323	MS.gene52273	0.820623	6.22E-53	-1.69E-46
MS.gene058334	MS.gene52273	-0.864177	1.47E-64	-1.69E-46
MS.gene058338	MS.gene52273	0.854521	1.16E-61	-1.69E-46
MS.gene05837	MS.gene52273	0.892783	1.15E-74	-1.69E-46
MS.gene058419	MS.gene52273	0.943343	1.43E-102	-1.69E-46
MS.gene058544	MS.gene52273	0.98701	9.65E-169	-1.69E-46
MS.gene058603	MS.gene52273	-0.81216	4.87E-51	-1.69E-46
MS.gene058723	MS.gene52273	0.878716	2.24E-69	-1.69E-46
MS.gene058773	MS.gene52273	0.905631	3.50E-80	-1.69E-46
MS.gene058838	MS.gene52273	0.902165	1.28E-78	-1.69E-46
MS.gene05883	MS.gene52273	0.86475	9.71E-65	-1.69E-46
MS.gene059022	MS.gene52273	0.932382	9.26E-95	-1.69E-46
MS.gene059023	MS.gene52273	0.930974	7.48E-94	-1.69E-46
MS.gene059029	MS.gene52273	0.831829	1.34E-55	-1.69E-46
MS.gene059103	MS.gene52273	-0.83112	2.00E-55	-1.69E-46
MS.gene05912	MS.gene52273	0.802663	5.04E-49	-1.69E-46
MS.gene05913	MS.gene52273	0.829152	6.04E-55	-1.69E-46
MS.gene05914	MS.gene52273	0.878377	2.95E-69	-1.69E-46
MS.gene059303	MS.gene52273	0.80087	1.18E-48	-1.69E-46
MS.gene05934	MS.gene52273	0.866449	2.83E-65	-1.69E-46
MS.gene059367	MS.gene52273	0.824578	7.48E-54	-1.69E-46
MS.gene059479	MS.gene52273	-0.804817	1.80E-49	-1.69E-46
MS.gene059480	MS.gene52273	-0.830409	2.99E-55	-1.69E-46
MS.gene059526	MS.gene52273	-0.817375	3.41E-52	-1.69E-46
MS.gene059536	MS.gene52273	0.838523	2.73E-57	-1.69E-46
MS.gene059667	MS.gene52273	0.8693	3.43E-66	-1.69E-46
MS.gene059677	MS.gene52273	0.940232	3.32E-100	-1.69E-46
MS.gene059699	MS.gene52273	-0.800445	1.44E-48	-1.69E-46
MS.gene059703	MS.gene52273	-0.81193	5.47E-51	-1.69E-46
MS.gene059718	MS.gene52273	0.937305	4.30E-98	-1.69E-46
MS.gene059756	MS.gene52273	0.909222	7.23E-82	-1.69E-46
MS.gene059801	MS.gene52273	0.848524	5.80E-60	-1.69E-46
MS.gene059837	MS.gene52273	0.819356	1.21E-52	-1.69E-46
MS.gene059865	MS.gene52273	0.900324	8.21E-78	-1.69E-46
MS.gene059902	MS.gene52273	0.861549	9.49E-64	-1.69E-46
MS.gene059953	MS.gene52273	-0.810324	1.22E-50	-1.69E-46
MS.gene059955	MS.gene52273	-0.807935	3.96E-50	-1.69E-46
MS.gene059960	MS.gene52273	0.811246	7.71E-51	-1.69E-46
MS.gene06000	MS.gene52273	0.85731	1.78E-62	-1.69E-46
MS.gene06027	MS.gene52273	0.810692	1.02E-50	-1.69E-46
MS.gene060337	MS.gene52273	-0.808776	2.62E-50	-1.69E-46
MS.gene060341	MS.gene52273	0.825842	3.76E-54	-1.69E-46
MS.gene060482	MS.gene52273	0.853337	2.55E-61	-1.69E-46
MS.gene060595	MS.gene52273	-0.804864	1.76E-49	-1.69E-46
MS.gene060703	MS.gene52273	0.855942	4.50E-62	-1.69E-46
MS.gene060728	MS.gene52273	0.818701	1.71E-52	-1.69E-46
MS.gene060762	MS.gene52273	0.912225	2.48E-83	-1.69E-46
MS.gene060778	MS.gene52273	0.845536	3.82E-59	-1.69E-46
MS.gene06077	MS.gene52273	0.924323	8.22E-90	-1.69E-46
MS.gene060804	MS.gene52273	0.817388	3.38E-52	-1.69E-46
MS.gene060823	MS.gene52273	-0.809785	1.59E-50	-1.69E-46
MS.gene060835	MS.gene52273	0.841612	4.27E-58	-1.69E-46
MS.gene06092	MS.gene52273	0.921203	4.83E-88	-1.69E-46
MS.gene060982	MS.gene52273	0.891947	2.49E-74	-1.69E-46
MS.gene061044	MS.gene52273	-0.819892	9.15E-53	-1.69E-46
MS.gene061150	MS.gene52273	0.927046	2.03E-91	-1.69E-46
MS.gene061200	MS.gene52273	0.830266	3.24E-55	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene52273.t1	MTR_7g080793	92.661	109	5	2	1	108	1	107	7.80e-71	206
MS.gene52273.t1	MTR_7g080803	69.091	110	30	3	1	108	1	108	1.33e-46	145
MS.gene52273.t1	MTR_5g008460	68.182	110	31	3	1	108	1	108	2.66e-46	145

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene52273.t1	AT4G10040	68.182	110	31	3	1	108	1	108	5.45e-46	144
MS.gene52273.t1	AT1G22840	66.364	110	33	3	1	108	1	108	3.81e-44	139
MS.gene52273.t1	AT1G22840	63.636	88	29	3	1	86	1	87	2.17e-31	107

Find 39 sgRNAs with CRISPR-Local

Find 51 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTCACCGGCAGCACGGTTTC+TGG	0.212914	7.4:+25689407	None:intergenic
ATCAATGTGTTGTACCTTCT+TGG	0.250097	7.4:+25689039	None:intergenic
TCAATGTGTTGTACCTTCTT+GGG	0.277885	7.4:+25689040	None:intergenic
TCTTATTGCATATCTGAAAT+AGG	0.298515	7.4:-25688714	None:intergenic
CCCAATCTGAATGGTTTGTT+TGG	0.305862	7.4:-25689163	MS.gene52273:CDS
ACAAGAACATGTCTATGAAT+TGG	0.322531	7.4:-25689096	MS.gene52273:CDS
GGTTTGTTTGGAAGTCAATC+TGG	0.344506	7.4:-25689151	MS.gene52273:CDS
GTGCTGCCGGTGAGAAGTTC+AGG	0.352217	7.4:-25689398	MS.gene52273:CDS
GCAACACAATATGAATATTC+AGG	0.355918	7.4:+25689121	None:intergenic
GATTATCACGTTCCTGGCCC+TGG	0.377704	7.4:+25688735	None:intergenic
TCACCGGCAGCACGGTTTCT+GGG	0.386514	7.4:+25689408	None:intergenic
CAAGAACATGTCTATGAATT+GGG	0.403729	7.4:-25689095	MS.gene52273:CDS
CAATAAGATTATCACGTTCC+TGG	0.419432	7.4:+25688729	None:intergenic
TCCAAACAAACCATTCAGAT+TGG	0.443064	7.4:+25689162	None:intergenic
ATTATCACGTTCCTGGCCCT+GGG	0.444706	7.4:+25688736	None:intergenic
GTACCTTCTTGGGGTTAAGC+AGG	0.466044	7.4:+25689050	None:intergenic
TCCTGCTCTTAAGAAGCCCC+AGG	0.485526	7.4:-25688753	MS.gene52273:CDS
TCTTAAGAAGCCCCAGGGCC+AGG	0.486959	7.4:-25688747	MS.gene52273:CDS
CCAAACAAACCATTCAGATT+GGG	0.496498	7.4:+25689163	None:intergenic
CCCTGGGGCTTCTTAAGAGC+AGG	0.499405	7.4:+25688752	None:intergenic
TATTAAACCTTGTTTGTGAA+CGG	0.502480	7.4:+25689341	None:intergenic
TTTGTGAACGGCTCCTATGT+TGG	0.508283	7.4:+25689353	None:intergenic
CTTCCCAGAAACCGTGCTGC+CGG	0.509379	7.4:-25689411	MS.gene52273:CDS
GTTTGTTTGGAAGTCAATCT+GGG	0.526603	7.4:-25689150	MS.gene52273:CDS
CAATGTGTTGTACCTTCTTG+GGG	0.536623	7.4:+25689041	None:intergenic
ACCTCAGGACCCAATCTGAA+TGG	0.540730	7.4:-25689172	MS.gene52273:intron
GCTCAATGCCACACCAACAT+AGG	0.557024	7.4:-25689366	MS.gene52273:CDS
GAATTGGGAGGAAAAGATCA+TGG	0.562314	7.4:-25689080	MS.gene52273:CDS
GCACGGTTTCTGGGAAGTGT+CGG	0.562820	7.4:+25689417	None:intergenic
GCACATCCTCGATACGAAGA+TGG	0.574573	7.4:-25688780	MS.gene52273:CDS
ATAGGAGCCGTTCACAAACA+AGG	0.604312	7.4:-25689348	MS.gene52273:intron
TGAACTTCTCACCGGCAGCA+CGG	0.620657	7.4:+25689400	None:intergenic
ATCACTCCTGAACTTCTCAC+CGG	0.651892	7.4:+25689392	None:intergenic
GAACATGTCTATGAATTGGG+AGG	0.658810	7.4:-25689092	MS.gene52273:CDS
GAAATACCATCTTCGTATCG+AGG	0.660566	7.4:+25688774	None:intergenic
TTACCTGCTTAACCCCAAGA+AGG	0.666741	7.4:-25689053	MS.gene52273:intron
CCTGCTCTTAAGAAGCCCCA+GGG	0.667349	7.4:-25688752	MS.gene52273:CDS
TTATCACGTTCCTGGCCCTG+GGG	0.669948	7.4:+25688737	None:intergenic
GAACGGCTCCTATGTTGGTG+TGG	0.672356	7.4:+25689358	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	GTATAATCATAATAAATTAA+TGG	+	chr7.4:25689273-25689292	None:intergenic	10.0%
!!	TAAAGAATATTTATATCAAA+TGG	-	chr7.4:25689160-25689179	MS.gene52273:CDS	10.0%
!!	CATCATATCATAATATTCTA+AGG	-	chr7.4:25688924-25688943	MS.gene52273:intron	20.0%
!!	GTAAATATGAGAGTTTATTT+AGG	+	chr7.4:25688848-25688867	None:intergenic	20.0%
!!	TTTATTATGATTATACTGAG+AGG	-	chr7.4:25689277-25689296	MS.gene52273:intron	20.0%
!	TTCATAGTAGAAAACAACAA+AGG	+	chr7.4:25689238-25689257	None:intergenic	25.0%
!!	TATTAAACCTTGTTTGTGAA+CGG	+	chr7.4:25688809-25688828	None:intergenic	25.0%
	ACAAGAACATGTCTATGAAT+TGG	-	chr7.4:25689051-25689070	MS.gene52273:intron	30.0%
	ATGATGACATATATTCAAGC+AGG	+	chr7.4:25688910-25688929	None:intergenic	30.0%
	CAAGAACATGTCTATGAATT+GGG	-	chr7.4:25689052-25689071	MS.gene52273:intron	30.0%
	GCAACACAATATGAATATTC+AGG	+	chr7.4:25689029-25689048	None:intergenic	30.0%
	TAATCGACATAGACTTTCAA+GGG	+	chr7.4:25689306-25689325	None:intergenic	30.0%
	TTAATCGACATAGACTTTCA+AGG	+	chr7.4:25689307-25689326	None:intergenic	30.0%
!!!	TTTTATTTGTTGTCAACCTC+AGG	-	chr7.4:25688960-25688979	MS.gene52273:intron	30.0%
	ATCAATGTGTTGTACCTTCT+TGG	+	chr7.4:25689111-25689130	None:intergenic	35.0%
	CAATAAGATTATCACGTTCC+TGG	+	chr7.4:25689421-25689440	None:intergenic	35.0%
	CCAAACAAACCATTCAGATT+GGG	+	chr7.4:25688987-25689006	None:intergenic	35.0%
	GTTTGTTTGGAAGTCAATCT+GGG	-	chr7.4:25688997-25689016	MS.gene52273:intron	35.0%
	TCAATGTGTTGTACCTTCTT+GGG	+	chr7.4:25689110-25689129	None:intergenic	35.0%
	TCCAAACAAACCATTCAGAT+TGG	+	chr7.4:25688988-25689007	None:intergenic	35.0%
!	AGAAGGTACAACACATTGAT+TGG	-	chr7.4:25689111-25689130	MS.gene52273:CDS	35.0%
	CAATGTGTTGTACCTTCTTG+GGG	+	chr7.4:25689109-25689128	None:intergenic	40.0%
	GAAATACCATCTTCGTATCG+AGG	+	chr7.4:25689376-25689395	None:intergenic	40.0%
	GAACATGTCTATGAATTGGG+AGG	-	chr7.4:25689055-25689074	MS.gene52273:CDS	40.0%
	GAATTGGGAGGAAAAGATCA+TGG	-	chr7.4:25689067-25689086	MS.gene52273:CDS	40.0%
!	ATATATTCAAGCAGGAGCAC+AGG	+	chr7.4:25688902-25688921	None:intergenic	40.0%
!	GGTTTGTTTGGAAGTCAATC+TGG	-	chr7.4:25688996-25689015	MS.gene52273:intron	40.0%
!!	CCCAATCTGAATGGTTTGTT+TGG	-	chr7.4:25688984-25689003	MS.gene52273:intron	40.0%
	ATAGGAGCCGTTCACAAACA+AGG	-	chr7.4:25688799-25688818	MS.gene52273:intron	45.0%
	ATCACTCCTGAACTTCTCAC+CGG	+	chr7.4:25688758-25688777	None:intergenic	45.0%
	TTACCTGCTTAACCCCAAGA+AGG	-	chr7.4:25689094-25689113	MS.gene52273:CDS	45.0%
	TTTGTGAACGGCTCCTATGT+TGG	+	chr7.4:25688797-25688816	None:intergenic	45.0%
	ACCATTCAGATTGGGTCCTG+AGG	+	chr7.4:25688979-25688998	None:intergenic	50.0%
	ACCTCAGGACCCAATCTGAA+TGG	-	chr7.4:25688975-25688994	MS.gene52273:intron	50.0%
	ATTATCACGTTCCTGGCCCT+GGG	+	chr7.4:25689414-25689433	None:intergenic	50.0%
	GCACATCCTCGATACGAAGA+TGG	-	chr7.4:25689367-25689386	MS.gene52273:CDS	50.0%
	GCTCAATGCCACACCAACAT+AGG	-	chr7.4:25688781-25688800	MS.gene52273:CDS	50.0%
	GTACCTTCTTGGGGTTAAGC+AGG	+	chr7.4:25689100-25689119	None:intergenic	50.0%
	CCTGCTCTTAAGAAGCCCCA+GGG	-	chr7.4:25689395-25689414	MS.gene52273:CDS	55.0%
	GAACGGCTCCTATGTTGGTG+TGG	+	chr7.4:25688792-25688811	None:intergenic	55.0%
	GATTATCACGTTCCTGGCCC+TGG	+	chr7.4:25689415-25689434	None:intergenic	55.0%
	TCCTGCTCTTAAGAAGCCCC+AGG	-	chr7.4:25689394-25689413	MS.gene52273:CDS	55.0%
	TGAACTTCTCACCGGCAGCA+CGG	+	chr7.4:25688750-25688769	None:intergenic	55.0%
	TTATCACGTTCCTGGCCCTG+GGG	+	chr7.4:25689413-25689432	None:intergenic	55.0%
!	GCACGGTTTCTGGGAAGTGT+CGG	+	chr7.4:25688733-25688752	None:intergenic	55.0%
	CCCTGGGGCTTCTTAAGAGC+AGG	+	chr7.4:25689398-25689417	None:intergenic	60.0%
	CTTCCCAGAAACCGTGCTGC+CGG	-	chr7.4:25688736-25688755	MS.gene52273:CDS	60.0%
	GTGCTGCCGGTGAGAAGTTC+AGG	-	chr7.4:25688749-25688768	MS.gene52273:CDS	60.0%
	TCACCGGCAGCACGGTTTCT+GGG	+	chr7.4:25688742-25688761	None:intergenic	60.0%
	TCTTAAGAAGCCCCAGGGCC+AGG	-	chr7.4:25689400-25689419	MS.gene52273:CDS	60.0%
	CTCACCGGCAGCACGGTTTC+TGG	+	chr7.4:25688743-25688762	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.4	gene	25688715	25689454	25688715	ID=MS.gene52273
chr7.4	mRNA	25688715	25689454	25688715	ID=MS.gene52273.t1;Parent=MS.gene52273
chr7.4	exon	25689349	25689454	25689349	ID=MS.gene52273.t1.exon1;Parent=MS.gene52273.t1
chr7.4	CDS	25689349	25689454	25689349	ID=cds.MS.gene52273.t1;Parent=MS.gene52273.t1
chr7.4	exon	25689054	25689187	25689054	ID=MS.gene52273.t1.exon2;Parent=MS.gene52273.t1
chr7.4	CDS	25689054	25689187	25689054	ID=cds.MS.gene52273.t1;Parent=MS.gene52273.t1
chr7.4	exon	25688715	25688801	25688715	ID=MS.gene52273.t1.exon3;Parent=MS.gene52273.t1
chr7.4	CDS	25688715	25688801	25688715	ID=cds.MS.gene52273.t1;Parent=MS.gene52273.t1

Gene Sequence

>MS.gene52273

ATGGAGTTGTTCGAACCGACACTTCCCAGAAACCGTGCTGCCGGTGAGAAGTTCAGGAGTGATTGCGCTCAATGCCACACCAACATAGGAGCCGTTCACAAACAAGGTTTAATATTAGTATTCTTTTCTGCCTAAATAAACTCTCATATTTACGTATCATGTGCTACTTAATTAGTTGCAGTTTCCTGTGCTCCTGCTTGAATATATGTCATCATATCATAATATTCTAAGGATAAAAATGTTTGTTTTATTTGTTGTCAACCTCAGGACCCAATCTGAATGGTTTGTTTGGAAGTCAATCTGGGACAACTCCTGAATATTCATATTGTGTTGCTAACAAGAACATGTCTATGAATTGGGAGGAAAAGATCATGGATGATTACCTGCTTAACCCCAAGAAGGTACAACACATTGATTGGCATTTCAATGTTTCTTTTTAGATCAATAAAGAATATTTATATCAAATGGTTATTAATAATCGCTTGATGCTTCTTTGTATATAATAATATTATCATTCTAACCTTTGTTGTTTTCTACTATGAATAAGCTCTTGTTCCATTAATTTATTATGATTATACTGAGAGGTAACCCTTGAAAGTCTATGTCGATTAAATGATCACTGATTTGTGTATTATTTTTTCATTCTTATGTAGCACATCCTCGATACGAAGATGGTATTTCCTGCTCTTAAGAAGCCCCAGGGCCAGGAACGTGATAATCTTATTGCATATCTGAAATAG

Protein sequence

>MS.gene52273.t1

MELFEPTLPRNRAAGEKFRSDCAQCHTNIGAVHKQGPNLNGLFGSQSGTTPEYSYCVANKNMSMNWEEKIMDDYLLNPKKHILDTKMVFPALKKPQGQERDNLIAYLK