Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80135.t1 | XP_003614423.1 | 98.6 | 575 | 6 | 1 | 1 | 573 | 1 | 575 | 0.00E+00 | 1140.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80135.t1 | Q9S713 | 80.0 | 515 | 103 | 0 | 59 | 573 | 48 | 562 | 8.6e-251 | 867.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80135.t1 | G7JX40 | 98.6 | 575 | 6 | 1 | 1 | 573 | 1 | 575 | 0.0e+00 | 1140.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene80135 | 0.800829 | 1.20E-48 | -1.69E-46 |
| MS.gene049171 | MS.gene80135 | 0.825783 | 3.88E-54 | -1.69E-46 |
| MS.gene049217 | MS.gene80135 | 0.82992 | 3.93E-55 | -1.69E-46 |
| MS.gene049222 | MS.gene80135 | 0.861839 | 7.74E-64 | -1.69E-46 |
| MS.gene049232 | MS.gene80135 | 0.838033 | 3.66E-57 | -1.69E-46 |
| MS.gene049285 | MS.gene80135 | 0.855724 | 5.20E-62 | -1.69E-46 |
| MS.gene049320 | MS.gene80135 | 0.860568 | 1.89E-63 | -1.69E-46 |
| MS.gene049356 | MS.gene80135 | 0.816692 | 4.85E-52 | -1.69E-46 |
| MS.gene049369 | MS.gene80135 | 0.854125 | 1.52E-61 | -1.69E-46 |
| MS.gene049396 | MS.gene80135 | 0.832161 | 1.11E-55 | -1.69E-46 |
| MS.gene04939 | MS.gene80135 | 0.811314 | 7.45E-51 | -1.69E-46 |
| MS.gene049609 | MS.gene80135 | 0.837759 | 4.30E-57 | -1.69E-46 |
| MS.gene049611 | MS.gene80135 | -0.813679 | 2.27E-51 | -1.69E-46 |
| MS.gene049633 | MS.gene80135 | 0.830983 | 2.16E-55 | -1.69E-46 |
| MS.gene049634 | MS.gene80135 | -0.808189 | 3.50E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene80135 | 0.850291 | 1.87E-60 | -1.69E-46 |
| MS.gene05010 | MS.gene80135 | 0.844741 | 6.27E-59 | -1.69E-46 |
| MS.gene050163 | MS.gene80135 | 0.826099 | 3.27E-54 | -1.69E-46 |
| MS.gene050165 | MS.gene80135 | 0.826079 | 3.30E-54 | -1.69E-46 |
| MS.gene050170 | MS.gene80135 | 0.839385 | 1.64E-57 | -1.69E-46 |
| MS.gene050216 | MS.gene80135 | 0.824305 | 8.68E-54 | -1.69E-46 |
| MS.gene050323 | MS.gene80135 | 0.872034 | 4.34E-67 | -1.69E-46 |
| MS.gene050333 | MS.gene80135 | 0.837628 | 4.65E-57 | -1.69E-46 |
| MS.gene050444 | MS.gene80135 | 0.848822 | 4.80E-60 | -1.69E-46 |
| MS.gene050496 | MS.gene80135 | 0.844458 | 7.47E-59 | -1.69E-46 |
| MS.gene050502 | MS.gene80135 | 0.811856 | 5.68E-51 | -1.69E-46 |
| MS.gene050504 | MS.gene80135 | 0.850896 | 1.26E-60 | -1.69E-46 |
| MS.gene050518 | MS.gene80135 | 0.834558 | 2.80E-56 | -1.69E-46 |
| MS.gene050520 | MS.gene80135 | 0.814137 | 1.80E-51 | -1.69E-46 |
| MS.gene050577 | MS.gene80135 | 0.821923 | 3.12E-53 | -1.69E-46 |
| MS.gene050593 | MS.gene80135 | 0.81571 | 8.04E-52 | -1.69E-46 |
| MS.gene050612 | MS.gene80135 | 0.86678 | 2.22E-65 | -1.69E-46 |
| MS.gene050675 | MS.gene80135 | 0.85346 | 2.36E-61 | -1.69E-46 |
| MS.gene050686 | MS.gene80135 | 0.812603 | 3.90E-51 | -1.69E-46 |
| MS.gene050697 | MS.gene80135 | 0.811291 | 7.54E-51 | -1.69E-46 |
| MS.gene050699 | MS.gene80135 | 0.831326 | 1.78E-55 | -1.69E-46 |
| MS.gene050747 | MS.gene80135 | 0.833667 | 4.67E-56 | -1.69E-46 |
| MS.gene050772 | MS.gene80135 | 0.856423 | 3.25E-62 | -1.69E-46 |
| MS.gene05079 | MS.gene80135 | -0.800877 | 1.17E-48 | -1.69E-46 |
| MS.gene050809 | MS.gene80135 | -0.801161 | 1.03E-48 | -1.69E-46 |
| MS.gene05080 | MS.gene80135 | 0.856372 | 3.36E-62 | -1.69E-46 |
| MS.gene050868 | MS.gene80135 | 0.880908 | 3.72E-70 | -1.69E-46 |
| MS.gene050871 | MS.gene80135 | 0.881733 | 1.88E-70 | -1.69E-46 |
| MS.gene050876 | MS.gene80135 | 0.812192 | 4.80E-51 | -1.69E-46 |
| MS.gene050904 | MS.gene80135 | 0.817395 | 3.37E-52 | -1.69E-46 |
| MS.gene050950 | MS.gene80135 | 0.815812 | 7.63E-52 | -1.69E-46 |
| MS.gene050986 | MS.gene80135 | 0.850147 | 2.05E-60 | -1.69E-46 |
| MS.gene05104 | MS.gene80135 | -0.812971 | 3.24E-51 | -1.69E-46 |
| MS.gene051138 | MS.gene80135 | -0.802532 | 5.37E-49 | -1.69E-46 |
| MS.gene051167 | MS.gene80135 | -0.803574 | 3.27E-49 | -1.69E-46 |
| MS.gene051228 | MS.gene80135 | 0.814858 | 1.24E-51 | -1.69E-46 |
| MS.gene051268 | MS.gene80135 | 0.819977 | 8.75E-53 | -1.69E-46 |
| MS.gene051317 | MS.gene80135 | 0.830983 | 2.16E-55 | -1.69E-46 |
| MS.gene051509 | MS.gene80135 | 0.837977 | 3.78E-57 | -1.69E-46 |
| MS.gene051551 | MS.gene80135 | 0.811133 | 8.15E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene80135 | 0.823937 | 1.06E-53 | -1.69E-46 |
| MS.gene051810 | MS.gene80135 | 0.816349 | 5.79E-52 | -1.69E-46 |
| MS.gene051838 | MS.gene80135 | 0.837641 | 4.61E-57 | -1.69E-46 |
| MS.gene051874 | MS.gene80135 | 0.860352 | 2.19E-63 | -1.69E-46 |
| MS.gene051941 | MS.gene80135 | 0.813158 | 2.95E-51 | -1.69E-46 |
| MS.gene052164 | MS.gene80135 | 0.843752 | 1.16E-58 | -1.69E-46 |
| MS.gene052421 | MS.gene80135 | 0.814386 | 1.58E-51 | -1.69E-46 |
| MS.gene052482 | MS.gene80135 | 0.806261 | 8.96E-50 | -1.69E-46 |
| MS.gene052486 | MS.gene80135 | 0.813699 | 2.24E-51 | -1.69E-46 |
| MS.gene052503 | MS.gene80135 | 0.843916 | 1.04E-58 | -1.69E-46 |
| MS.gene052504 | MS.gene80135 | 0.839308 | 1.71E-57 | -1.69E-46 |
| MS.gene052506 | MS.gene80135 | 0.841843 | 3.72E-58 | -1.69E-46 |
| MS.gene052615 | MS.gene80135 | 0.841108 | 5.80E-58 | -1.69E-46 |
| MS.gene052805 | MS.gene80135 | -0.832427 | 9.51E-56 | -1.69E-46 |
| MS.gene052820 | MS.gene80135 | 0.800892 | 1.16E-48 | -1.69E-46 |
| MS.gene052822 | MS.gene80135 | 0.851872 | 6.69E-61 | -1.69E-46 |
| MS.gene052823 | MS.gene80135 | 0.839995 | 1.13E-57 | -1.69E-46 |
| MS.gene052825 | MS.gene80135 | 0.835124 | 2.01E-56 | -1.69E-46 |
| MS.gene052870 | MS.gene80135 | 0.802678 | 5.01E-49 | -1.69E-46 |
| MS.gene052872 | MS.gene80135 | 0.819143 | 1.36E-52 | -1.69E-46 |
| MS.gene052916 | MS.gene80135 | 0.830569 | 2.73E-55 | -1.69E-46 |
| MS.gene052966 | MS.gene80135 | 0.86146 | 1.01E-63 | -1.69E-46 |
| MS.gene053104 | MS.gene80135 | 0.80241 | 5.69E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene80135 | 0.823263 | 1.52E-53 | -1.69E-46 |
| MS.gene053207 | MS.gene80135 | 0.821566 | 3.77E-53 | -1.69E-46 |
| MS.gene053213 | MS.gene80135 | 0.84023 | 9.85E-58 | -1.69E-46 |
| MS.gene053286 | MS.gene80135 | 0.836376 | 9.70E-57 | -1.69E-46 |
| MS.gene053420 | MS.gene80135 | -0.804792 | 1.82E-49 | -1.69E-46 |
| MS.gene053436 | MS.gene80135 | 0.831365 | 1.74E-55 | -1.69E-46 |
| MS.gene053449 | MS.gene80135 | 0.852131 | 5.64E-61 | -1.69E-46 |
| MS.gene053479 | MS.gene80135 | 0.834069 | 3.71E-56 | -1.69E-46 |
| MS.gene053480 | MS.gene80135 | 0.818757 | 1.66E-52 | -1.69E-46 |
| MS.gene053574 | MS.gene80135 | 0.842796 | 2.08E-58 | -1.69E-46 |
| MS.gene053626 | MS.gene80135 | 0.834957 | 2.22E-56 | -1.69E-46 |
| MS.gene053632 | MS.gene80135 | 0.859175 | 4.96E-63 | -1.69E-46 |
| MS.gene053824 | MS.gene80135 | 0.870776 | 1.13E-66 | -1.69E-46 |
| MS.gene053912 | MS.gene80135 | 0.827344 | 1.65E-54 | -1.69E-46 |
| MS.gene053916 | MS.gene80135 | 0.914833 | 1.20E-84 | -1.69E-46 |
| MS.gene054408 | MS.gene80135 | 0.819264 | 1.27E-52 | -1.69E-46 |
| MS.gene054595 | MS.gene80135 | 0.866851 | 2.11E-65 | -1.69E-46 |
| MS.gene054600 | MS.gene80135 | 0.848246 | 6.93E-60 | -1.69E-46 |
| MS.gene054642 | MS.gene80135 | 0.856434 | 3.23E-62 | -1.69E-46 |
| MS.gene054706 | MS.gene80135 | -0.829693 | 4.46E-55 | -1.69E-46 |
| MS.gene05470 | MS.gene80135 | 0.814816 | 1.27E-51 | -1.69E-46 |
| MS.gene05494 | MS.gene80135 | 0.864806 | 9.32E-65 | -1.69E-46 |
| MS.gene054954 | MS.gene80135 | 0.849172 | 3.84E-60 | -1.69E-46 |
| MS.gene05505 | MS.gene80135 | 0.855142 | 7.69E-62 | -1.69E-46 |
| MS.gene055206 | MS.gene80135 | 0.814937 | 1.19E-51 | -1.69E-46 |
| MS.gene055224 | MS.gene80135 | 0.856885 | 2.38E-62 | -1.69E-46 |
| MS.gene055289 | MS.gene80135 | 0.805456 | 1.32E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene80135 | 0.851562 | 8.19E-61 | -1.69E-46 |
| MS.gene055502 | MS.gene80135 | 0.845636 | 3.59E-59 | -1.69E-46 |
| MS.gene055577 | MS.gene80135 | 0.870464 | 1.43E-66 | -1.69E-46 |
| MS.gene055722 | MS.gene80135 | 0.822536 | 2.25E-53 | -1.69E-46 |
| MS.gene055741 | MS.gene80135 | 0.807481 | 4.95E-50 | -1.69E-46 |
| MS.gene055748 | MS.gene80135 | 0.862237 | 5.84E-64 | -1.69E-46 |
| MS.gene055750 | MS.gene80135 | 0.87964 | 1.06E-69 | -1.69E-46 |
| MS.gene055751 | MS.gene80135 | 0.865317 | 6.44E-65 | -1.69E-46 |
| MS.gene055776 | MS.gene80135 | 0.824357 | 8.43E-54 | -1.69E-46 |
| MS.gene05589 | MS.gene80135 | 0.848876 | 4.63E-60 | -1.69E-46 |
| MS.gene055909 | MS.gene80135 | 0.815434 | 9.26E-52 | -1.69E-46 |
| MS.gene055911 | MS.gene80135 | 0.81302 | 3.16E-51 | -1.69E-46 |
| MS.gene05592 | MS.gene80135 | 0.840575 | 8.01E-58 | -1.69E-46 |
| MS.gene055941 | MS.gene80135 | 0.879823 | 9.10E-70 | -1.69E-46 |
| MS.gene056283 | MS.gene80135 | 0.816296 | 5.95E-52 | -1.69E-46 |
| MS.gene056374 | MS.gene80135 | 0.813396 | 2.61E-51 | -1.69E-46 |
| MS.gene056387 | MS.gene80135 | 0.855465 | 6.20E-62 | -1.69E-46 |
| MS.gene056422 | MS.gene80135 | 0.82422 | 9.08E-54 | -1.69E-46 |
| MS.gene056446 | MS.gene80135 | 0.811326 | 7.41E-51 | -1.69E-46 |
| MS.gene056449 | MS.gene80135 | 0.801607 | 8.31E-49 | -1.69E-46 |
| MS.gene056487 | MS.gene80135 | 0.84616 | 2.59E-59 | -1.69E-46 |
| MS.gene056504 | MS.gene80135 | 0.875996 | 1.98E-68 | -1.69E-46 |
| MS.gene056510 | MS.gene80135 | 0.846883 | 1.64E-59 | -1.69E-46 |
| MS.gene05664 | MS.gene80135 | 0.830637 | 2.63E-55 | -1.69E-46 |
| MS.gene056657 | MS.gene80135 | 0.871566 | 6.20E-67 | -1.69E-46 |
| MS.gene05666 | MS.gene80135 | 0.83482 | 2.40E-56 | -1.69E-46 |
| MS.gene056692 | MS.gene80135 | 0.801314 | 9.54E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene80135 | 0.860352 | 2.19E-63 | -1.69E-46 |
| MS.gene057086 | MS.gene80135 | 0.884845 | 1.35E-71 | -1.69E-46 |
| MS.gene057331 | MS.gene80135 | 0.803637 | 3.17E-49 | -1.69E-46 |
| MS.gene05735 | MS.gene80135 | 0.8046 | 2.00E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene80135 | 0.81878 | 1.64E-52 | -1.69E-46 |
| MS.gene057537 | MS.gene80135 | 0.800478 | 1.41E-48 | -1.69E-46 |
| MS.gene05753 | MS.gene80135 | 0.800283 | 1.55E-48 | -1.69E-46 |
| MS.gene057734 | MS.gene80135 | 0.849701 | 2.73E-60 | -1.69E-46 |
| MS.gene057831 | MS.gene80135 | 0.818056 | 2.39E-52 | -1.69E-46 |
| MS.gene057856 | MS.gene80135 | 0.821886 | 3.18E-53 | -1.69E-46 |
| MS.gene057857 | MS.gene80135 | 0.822867 | 1.88E-53 | -1.69E-46 |
| MS.gene05787 | MS.gene80135 | 0.82924 | 5.75E-55 | -1.69E-46 |
| MS.gene057926 | MS.gene80135 | 0.872235 | 3.72E-67 | -1.69E-46 |
| MS.gene057927 | MS.gene80135 | 0.804256 | 2.36E-49 | -1.69E-46 |
| MS.gene058019 | MS.gene80135 | 0.810632 | 1.05E-50 | -1.69E-46 |
| MS.gene058120 | MS.gene80135 | 0.811942 | 5.44E-51 | -1.69E-46 |
| MS.gene058157 | MS.gene80135 | 0.816633 | 5.00E-52 | -1.69E-46 |
| MS.gene058334 | MS.gene80135 | -0.814909 | 1.21E-51 | -1.69E-46 |
| MS.gene058338 | MS.gene80135 | 0.811181 | 7.96E-51 | -1.69E-46 |
| MS.gene05837 | MS.gene80135 | 0.834299 | 3.25E-56 | -1.69E-46 |
| MS.gene058419 | MS.gene80135 | 0.853737 | 1.96E-61 | -1.69E-46 |
| MS.gene058459 | MS.gene80135 | 0.804958 | 1.68E-49 | -1.69E-46 |
| MS.gene058723 | MS.gene80135 | 0.80106 | 1.08E-48 | -1.69E-46 |
| MS.gene058773 | MS.gene80135 | 0.836535 | 8.84E-57 | -1.69E-46 |
| MS.gene058838 | MS.gene80135 | 0.857004 | 2.19E-62 | -1.69E-46 |
| MS.gene058948 | MS.gene80135 | 0.801353 | 9.37E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene80135 | 0.837318 | 5.58E-57 | -1.69E-46 |
| MS.gene059023 | MS.gene80135 | 0.835057 | 2.09E-56 | -1.69E-46 |
| MS.gene05913 | MS.gene80135 | 0.834099 | 3.65E-56 | -1.69E-46 |
| MS.gene059305 | MS.gene80135 | 0.858769 | 6.56E-63 | -1.69E-46 |
| MS.gene05934 | MS.gene80135 | 0.810097 | 1.37E-50 | -1.69E-46 |
| MS.gene059367 | MS.gene80135 | 0.891917 | 2.56E-74 | -1.69E-46 |
| MS.gene059368 | MS.gene80135 | 0.861282 | 1.14E-63 | -1.69E-46 |
| MS.gene059667 | MS.gene80135 | 0.812837 | 3.47E-51 | -1.69E-46 |
| MS.gene059674 | MS.gene80135 | 0.823896 | 1.08E-53 | -1.69E-46 |
| MS.gene059677 | MS.gene80135 | 0.838948 | 2.12E-57 | -1.69E-46 |
| MS.gene059699 | MS.gene80135 | -0.827255 | 1.73E-54 | -1.69E-46 |
| MS.gene059703 | MS.gene80135 | -0.825714 | 4.03E-54 | -1.69E-46 |
| MS.gene059718 | MS.gene80135 | 0.854164 | 1.48E-61 | -1.69E-46 |
| MS.gene059801 | MS.gene80135 | 0.817182 | 3.76E-52 | -1.69E-46 |
| MS.gene059865 | MS.gene80135 | 0.863825 | 1.89E-64 | -1.69E-46 |
| MS.gene06000 | MS.gene80135 | 0.825807 | 3.83E-54 | -1.69E-46 |
| MS.gene060372 | MS.gene80135 | 0.807771 | 4.30E-50 | -1.69E-46 |
| MS.gene060482 | MS.gene80135 | 0.819763 | 9.79E-53 | -1.69E-46 |
| MS.gene060703 | MS.gene80135 | 0.814445 | 1.53E-51 | -1.69E-46 |
| MS.gene060762 | MS.gene80135 | 0.854596 | 1.11E-61 | -1.69E-46 |
| MS.gene060778 | MS.gene80135 | 0.877418 | 6.38E-69 | -1.69E-46 |
| MS.gene06077 | MS.gene80135 | 0.832632 | 8.46E-56 | -1.69E-46 |
| MS.gene060804 | MS.gene80135 | 0.806668 | 7.36E-50 | -1.69E-46 |
| MS.gene060818 | MS.gene80135 | 0.823331 | 1.47E-53 | -1.69E-46 |
| MS.gene060835 | MS.gene80135 | 0.863778 | 1.95E-64 | -1.69E-46 |
| MS.gene060837 | MS.gene80135 | 0.8187 | 1.71E-52 | -1.69E-46 |
| MS.gene06092 | MS.gene80135 | 0.825803 | 3.84E-54 | -1.69E-46 |
| MS.gene06097 | MS.gene80135 | 0.853119 | 2.95E-61 | -1.69E-46 |
| MS.gene060982 | MS.gene80135 | 0.866325 | 3.10E-65 | -1.69E-46 |
| MS.gene061041 | MS.gene80135 | 0.852039 | 5.99E-61 | -1.69E-46 |
| MS.gene061150 | MS.gene80135 | 0.81028 | 1.25E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80135.t1 | MTR_5g053450 | 98.609 | 575 | 6 | 1 | 1 | 573 | 1 | 575 | 0.0 | 1159 |
| MS.gene80135.t1 | MTR_7g073530 | 39.340 | 394 | 198 | 9 | 104 | 463 | 86 | 472 | 1.22e-84 | 272 |
| MS.gene80135.t1 | MTR_8g005720 | 40.580 | 414 | 185 | 9 | 105 | 479 | 92 | 483 | 7.59e-79 | 258 |
| MS.gene80135.t1 | MTR_7g073540 | 32.124 | 193 | 87 | 5 | 271 | 463 | 1 | 149 | 3.48e-21 | 91.3 |
| MS.gene80135.t1 | MTR_7g073560 | 41.905 | 105 | 52 | 2 | 362 | 463 | 21 | 119 | 2.58e-17 | 79.3 |
| MS.gene80135.t1 | MTR_7g073610 | 41.905 | 105 | 52 | 2 | 362 | 463 | 21 | 119 | 2.58e-17 | 79.3 |
| MS.gene80135.t1 | MTR_4g007750 | 30.374 | 214 | 109 | 7 | 264 | 464 | 118 | 304 | 2.53e-15 | 77.4 |
| MS.gene80135.t1 | MTR_1g075610 | 27.830 | 212 | 111 | 6 | 267 | 464 | 126 | 309 | 6.39e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80135.t1 | AT1G68830 | 83.301 | 515 | 86 | 0 | 59 | 573 | 48 | 562 | 0.0 | 907 |
| MS.gene80135.t1 | AT5G01920 | 41.191 | 403 | 193 | 7 | 112 | 477 | 96 | 491 | 3.04e-88 | 281 |
| MS.gene80135.t1 | AT5G01920 | 41.191 | 403 | 193 | 7 | 112 | 477 | 96 | 491 | 3.04e-88 | 281 |
| MS.gene80135.t1 | AT2G38620 | 30.986 | 213 | 111 | 7 | 263 | 464 | 55 | 242 | 1.27e-15 | 77.4 |
| MS.gene80135.t1 | AT2G38620 | 27.566 | 341 | 178 | 14 | 149 | 464 | 8 | 304 | 1.62e-15 | 78.2 |
Find 118 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGTGCTTTGTCTTATCTT+TGG | 0.201448 | 5.1:-42296807 | MS.gene80135:CDS |
| CCTGGTGTTGTTCTTGCTTT+TGG | 0.208005 | 5.1:-42296826 | MS.gene80135:CDS |
| CTCCTGAATATTGGCTTATA+TGG | 0.234852 | 5.1:-42295218 | MS.gene80135:CDS |
| TACCTTTGAAGAGGGCTTCT+TGG | 0.263410 | 5.1:+42295897 | None:intergenic |
| TGGTGCTTTGTCTTATCTTT+GGG | 0.266282 | 5.1:-42296806 | MS.gene80135:CDS |
| CGAGCAACACAACAGGATTA+TGG | 0.267381 | 5.1:-42293364 | MS.gene80135:CDS |
| AGAGTTTGATTCTAAGTCTT+TGG | 0.272209 | 5.1:+42297046 | None:intergenic |
| GCCTTTGCCTTGCTTTATAT+CGG | 0.279262 | 5.1:+42293479 | None:intergenic |
| TTGTGCACCAGCCTTCTTCT+TGG | 0.291467 | 5.1:+42292832 | None:intergenic |
| AATATGGTGCTGTAGAAATT+TGG | 0.292645 | 5.1:-42295446 | MS.gene80135:CDS |
| ATTGACGGTTGAATTGTATA+AGG | 0.298216 | 5.1:+42293635 | None:intergenic |
| CTTTGTGACTCCAATTCCTT+TGG | 0.309079 | 5.1:+42297110 | None:intergenic |
| CAGGTCGAAACATTGATTCT+TGG | 0.309965 | 5.1:-42294763 | MS.gene80135:CDS |
| TTGAAGAAGGCGACTGAATA+TGG | 0.312551 | 5.1:-42295462 | MS.gene80135:CDS |
| TACAACTTTCATTCCTCTCT+TGG | 0.323203 | 5.1:+42292695 | None:intergenic |
| AAGAGACTACCAACATTATA+TGG | 0.329901 | 5.1:+42295144 | None:intergenic |
| CATTCCTAAAGAGTTTCTTT+TGG | 0.331479 | 5.1:-42294433 | MS.gene80135:CDS |
| GGATCCAAAAGAAACTCTTT+AGG | 0.332998 | 5.1:+42294429 | None:intergenic |
| TGTGCACCAGCCTTCTTCTT+GGG | 0.348907 | 5.1:+42292833 | None:intergenic |
| CAAGTGGATTATTCAGCTTA+TGG | 0.349059 | 5.1:-42293332 | MS.gene80135:CDS |
| CAAAGAAGACTCCTGAATAT+TGG | 0.362523 | 5.1:-42295227 | MS.gene80135:CDS |
| CTGCACTCTCTCCAGTCTTA+TGG | 0.363671 | 5.1:-42294181 | MS.gene80135:CDS |
| ATTCAGCTTATGGCAAAATC+AGG | 0.382255 | 5.1:-42293322 | MS.gene80135:CDS |
| ACATTCAAAATAATTGATCT+TGG | 0.382791 | 5.1:-42294489 | MS.gene80135:CDS |
| CTCCATATAAGCCAATATTC+AGG | 0.386303 | 5.1:+42295216 | None:intergenic |
| TTGGATTTAGATGGTGGAAT+AGG | 0.399496 | 5.1:-42293526 | MS.gene80135:CDS |
| CAACACCAACACCTACAAAA+AGG | 0.400926 | 5.1:+42296932 | None:intergenic |
| ACTGTTGCAACCAAAGGAAT+TGG | 0.403712 | 5.1:-42297120 | MS.gene80135:CDS |
| AAGCCTTCTTTGTCAAAGTA+AGG | 0.405199 | 5.1:+42293430 | None:intergenic |
| CTTTGACAAAGAAGGCTTGT+TGG | 0.405734 | 5.1:-42293425 | MS.gene80135:CDS |
| ACAAGATTTGCCAAAGGGAT+TGG | 0.407482 | 5.1:-42294734 | MS.gene80135:CDS |
| GCTACACCTGGTGTTGCTCC+TGG | 0.415742 | 5.1:-42296784 | MS.gene80135:CDS |
| CATCCTTACTTTGACAAAGA+AGG | 0.421240 | 5.1:-42293433 | MS.gene80135:CDS |
| ACAACTTTCATTCCTCTCTT+GGG | 0.423424 | 5.1:+42292696 | None:intergenic |
| GGAGAGAGTGCAGTTGCAAC+TGG | 0.425506 | 5.1:+42294191 | None:intergenic |
| TTTGAGCTGTTGGATTTAGA+TGG | 0.428984 | 5.1:-42293535 | MS.gene80135:CDS |
| TCTTATCTTTGGGCTACACC+TGG | 0.433977 | 5.1:-42296796 | MS.gene80135:CDS |
| ATCACCACAAAAGCCATTCA+TGG | 0.434279 | 5.1:-42296985 | MS.gene80135:CDS |
| TAGGAGAGGCTTTGAGCTGT+TGG | 0.438205 | 5.1:-42293545 | MS.gene80135:CDS |
| AAGTCTTTGGCCAAGGAAGA+TGG | 0.440935 | 5.1:+42297059 | None:intergenic |
| TGGCTTATATGGAGGTTTGA+AGG | 0.443769 | 5.1:-42295207 | MS.gene80135:CDS |
| AGTCACACCTCTTTAATTGA+CGG | 0.447260 | 5.1:+42293620 | None:intergenic |
| GGCTTGAATGTTACTGTCCC+TGG | 0.447608 | 5.1:-42296844 | MS.gene80135:CDS |
| ATTTAGATGGTGGAATAGGA+TGG | 0.450263 | 5.1:-42293522 | MS.gene80135:CDS |
| GGCTTATATGGAGGTTTGAA+GGG | 0.452837 | 5.1:-42295206 | MS.gene80135:CDS |
| CTCAACTGGTATTGTGCATA+GGG | 0.466971 | 5.1:-42294647 | MS.gene80135:CDS |
| CTATTATCAGAGCGTAAGCC+AGG | 0.468233 | 5.1:+42293658 | None:intergenic |
| TTAGACGGTCTTCACTCAAC+TGG | 0.479359 | 5.1:-42294661 | MS.gene80135:CDS |
| GGCAAAATCAGGAACAGAAA+AGG | 0.483650 | 5.1:-42293311 | MS.gene80135:CDS |
| AAAGCATTTGGTGGAGGAGA+TGG | 0.488211 | 5.1:-42292721 | MS.gene80135:CDS |
| AGATGCGTACTCTAAGTTCC+TGG | 0.490642 | 5.1:+42293263 | None:intergenic |
| CTTGCACTGCATGGTGGTGG+TGG | 0.491350 | 5.1:+42297012 | None:intergenic |
| AATAATAATACCTTTGAAGA+GGG | 0.497156 | 5.1:+42295889 | None:intergenic |
| AATCCATTCAGCACCATGAA+TGG | 0.498174 | 5.1:+42296972 | None:intergenic |
| CTCGATGTGGCGCTGAACTT+AGG | 0.499449 | 5.1:-42293564 | MS.gene80135:CDS |
| GGAAATTGTGCCCAAGAAGA+AGG | 0.504841 | 5.1:-42292843 | MS.gene80135:CDS |
| CTGAATATTGGCTTATATGG+AGG | 0.508004 | 5.1:-42295215 | MS.gene80135:CDS |
| CCAAAAGCAAGAACAACACC+AGG | 0.508205 | 5.1:+42296826 | None:intergenic |
| AAGCCATTCATGGTGCTGAA+TGG | 0.509311 | 5.1:-42296975 | MS.gene80135:CDS |
| ACTCAACTGGTATTGTGCAT+AGG | 0.510063 | 5.1:-42294648 | MS.gene80135:CDS |
| TGGTCTAATATTCCTCCAAA+TGG | 0.512216 | 5.1:-42294018 | MS.gene80135:intron |
| AATTCCTTTGGTTGCAACAG+TGG | 0.512321 | 5.1:+42297122 | None:intergenic |
| GTTTAGACCTACTTTCAGAA+AGG | 0.516126 | 5.1:-42296722 | MS.gene80135:intron |
| AGTTTAACCTGCCATAAGAC+TGG | 0.523445 | 5.1:+42294170 | None:intergenic |
| GTGCTCATAATGTACTGCTC+TGG | 0.529003 | 5.1:+42294239 | None:intergenic |
| ACATTCAAGCCACTAGACTT+AGG | 0.534526 | 5.1:+42296856 | None:intergenic |
| AATTCAACCGTCAATTAAAG+AGG | 0.535042 | 5.1:-42293627 | MS.gene80135:CDS |
| CTGTAGATATCAAATCTGTC+AGG | 0.543319 | 5.1:+42294044 | None:intergenic |
| AATCTTGCACTGCATGGTGG+TGG | 0.543569 | 5.1:+42297009 | None:intergenic |
| GAGGTACAAGATTTGCCAAA+GGG | 0.544928 | 5.1:-42294739 | MS.gene80135:CDS |
| TTTAGATGGTGGAATAGGAT+GGG | 0.547130 | 5.1:-42293521 | MS.gene80135:CDS |
| CAACTCTTGTTCGCATTAGA+CGG | 0.553953 | 5.1:-42294676 | MS.gene80135:CDS |
| TAACAAACCTTTCTGAAAGT+AGG | 0.555509 | 5.1:+42296715 | None:intergenic |
| CTTCAGCTCTTAAAGTGCAA+AGG | 0.564633 | 5.1:-42292796 | MS.gene80135:CDS |
| TGATTCTAAGTCTTTGGCCA+AGG | 0.566305 | 5.1:+42297052 | None:intergenic |
| ACTCTCTCCAGTCTTATGGC+AGG | 0.570820 | 5.1:-42294177 | MS.gene80135:intron |
| CCACACTCCATCACAGTGCA+TGG | 0.571570 | 5.1:+42296904 | None:intergenic |
| AGCCAAGAAGCCCTCTTCAA+AGG | 0.573453 | 5.1:-42295899 | MS.gene80135:intron |
| ATCCTTCCATTTCAGATATG+CGG | 0.573898 | 5.1:-42294264 | MS.gene80135:intron |
| ATTTGATACTCACCATTTGG+AGG | 0.574767 | 5.1:+42294006 | None:intergenic |
| ACTGGAGCTGAGGGTGCAGA+TGG | 0.578510 | 5.1:+42294209 | None:intergenic |
| AGATTTGATATCTACAGTAC+TGG | 0.579644 | 5.1:-42294038 | MS.gene80135:CDS |
| ATTGTGCCCAAGAAGAAGGC+TGG | 0.580227 | 5.1:-42292839 | MS.gene80135:CDS |
| ATTCACTGAAGCTCAACTCC+AGG | 0.580949 | 5.1:-42293281 | MS.gene80135:CDS |
| AAAACAGGAAAAGCATTTGG+TGG | 0.582619 | 5.1:-42292730 | MS.gene80135:CDS |
| ACAGGAAAAGCATTTGGTGG+AGG | 0.584401 | 5.1:-42292727 | MS.gene80135:CDS |
| CGAAACATTGATTCTTGGCG+AGG | 0.584582 | 5.1:-42294758 | MS.gene80135:CDS |
| GTGATGAATCTTGCACTGCA+TGG | 0.588583 | 5.1:+42297003 | None:intergenic |
| ATGGCCACTGTTGCAACCAA+AGG | 0.589790 | 5.1:-42297126 | MS.gene80135:CDS |
| GTGACTATGACTTGGTTGCA+TGG | 0.590726 | 5.1:-42293603 | MS.gene80135:CDS |
| TGCAGTTGCAACTGGAGCTG+AGG | 0.594722 | 5.1:+42294199 | None:intergenic |
| CAATAATAATACCTTTGAAG+AGG | 0.595715 | 5.1:+42295888 | None:intergenic |
| AGGTGACTTAGTCTTGAAGA+AGG | 0.596316 | 5.1:-42295475 | MS.gene80135:CDS |
| CATAAGCTGAATAATCCACT+TGG | 0.599152 | 5.1:+42293333 | None:intergenic |
| GCTTATATGGAGGTTTGAAG+GGG | 0.600363 | 5.1:-42295205 | MS.gene80135:CDS |
| ACTCTGCAATAGATCAGCTA+AGG | 0.600527 | 5.1:+42295176 | None:intergenic |
| AGCACTCTTCCTAAGTCTAG+TGG | 0.608042 | 5.1:-42296865 | MS.gene80135:CDS |
| TGGACTTCCATGCACTGTGA+TGG | 0.608649 | 5.1:-42296911 | MS.gene80135:CDS |
| AAAATCAGGAACAGAAAAGG+AGG | 0.609977 | 5.1:-42293308 | MS.gene80135:CDS |
| GAGCTGTTGGATTTAGATGG+TGG | 0.611282 | 5.1:-42293532 | MS.gene80135:CDS |
| CGAGGTACAAGATTTGCCAA+AGG | 0.612682 | 5.1:-42294740 | MS.gene80135:CDS |
| GCTGCTACAGACTTGCGAGT+TGG | 0.612827 | 5.1:-42294465 | MS.gene80135:CDS |
| CCATGCACTGTGATGGAGTG+TGG | 0.621185 | 5.1:-42296904 | MS.gene80135:CDS |
| CAATGGTCCGATATAAAGCA+AGG | 0.622058 | 5.1:-42293486 | MS.gene80135:CDS |
| TCCGATATAAAGCAAGGCAA+AGG | 0.623569 | 5.1:-42293480 | MS.gene80135:CDS |
| TATCTATCATGCAAAATCTG+AGG | 0.626573 | 5.1:-42293399 | MS.gene80135:CDS |
| GCAGTTGCAACTGGAGCTGA+GGG | 0.634177 | 5.1:+42294200 | None:intergenic |
| TCAGGAACAGAAAAGGAGGG+TGG | 0.634221 | 5.1:-42293304 | MS.gene80135:CDS |
| TCAGAGAAAATAATGTTCTG+CGG | 0.642515 | 5.1:+42294616 | None:intergenic |
| CAAAAGCAAGAACAACACCA+GGG | 0.646990 | 5.1:+42296827 | None:intergenic |
| GAGGAGATGGATCCCAAGAG+AGG | 0.662184 | 5.1:-42292708 | MS.gene80135:CDS |
| AAAGAGGTGTGACTATGACT+TGG | 0.672074 | 5.1:-42293611 | MS.gene80135:CDS |
| ATGAATCTTGCACTGCATGG+TGG | 0.677136 | 5.1:+42297006 | None:intergenic |
| AAAACTGTGGAGCCTCGATG+TGG | 0.677269 | 5.1:-42293577 | MS.gene80135:CDS |
| TGTGGCGCTGAACTTAGGAG+AGG | 0.694905 | 5.1:-42293559 | MS.gene80135:CDS |
| AAATCAGGAACAGAAAAGGA+GGG | 0.696429 | 5.1:-42293307 | MS.gene80135:CDS |
| ATTATGGAGAAGCTGCCAAG+TGG | 0.696799 | 5.1:-42293348 | MS.gene80135:CDS |
| CTAAGTTCAGCGCCACATCG+AGG | 0.705406 | 5.1:+42293565 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGATATATATTCTATTTAT+TGG | - | chr5.1:42294055-42294074 | MS.gene80135:CDS | 10.0% |
| !!! | AAACTTTGTTATAAAATTTA+AGG | + | chr5.1:42294758-42294777 | None:intergenic | 10.0% |
| !!! | TTAATTTTTTTTATTAACCA+TGG | - | chr5.1:42295303-42295322 | MS.gene80135:intron | 10.0% |
| !! | AAAAAAATTAAAGCATAACT+TGG | + | chr5.1:42295294-42295313 | None:intergenic | 15.0% |
| !! | AAATTTAAATAGAACTTTCT+CGG | + | chr5.1:42294976-42294995 | None:intergenic | 15.0% |
| !! | AATAGAATAGAGATAATTTA+TGG | - | chr5.1:42293707-42293726 | MS.gene80135:intron | 15.0% |
| !! | ATTATTTATAGATTCTCTTA+CGG | - | chr5.1:42294202-42294221 | MS.gene80135:CDS | 15.0% |
| !! | ATTTCCATTATTAGAAATAT+AGG | + | chr5.1:42296057-42296076 | None:intergenic | 15.0% |
| !! | TATTATTATTGTTATGGATA+TGG | - | chr5.1:42293953-42293972 | MS.gene80135:intron | 15.0% |
| !! | TCTGATACTATATTAAAATT+TGG | - | chr5.1:42293640-42293659 | MS.gene80135:CDS | 15.0% |
| !! | TGATTAATAGATACATTATT+AGG | - | chr5.1:42295485-42295504 | MS.gene80135:intron | 15.0% |
| !!! | AAATAAACAAGTTTTGATTT+TGG | + | chr5.1:42296810-42296829 | None:intergenic | 15.0% |
| !!! | AAATAAGCAAATTTTCATTT+TGG | + | chr5.1:42296888-42296907 | None:intergenic | 15.0% |
| !!! | AGTCAAAAGAATTTTTTTAT+CGG | - | chr5.1:42296782-42296801 | MS.gene80135:CDS | 15.0% |
| !!! | ATTTAGTTTTTTTTCTATCA+AGG | - | chr5.1:42293354-42293373 | MS.gene80135:CDS | 15.0% |
| !!! | CAATTTTGATCATTTTATAT+AGG | - | chr5.1:42296143-42296162 | MS.gene80135:intron | 15.0% |
| !!! | GCTAAATTATTAAATGTTTT+TGG | - | chr5.1:42294080-42294099 | MS.gene80135:intron | 15.0% |
| !!! | TTTTTATGAAATAGTATTTC+AGG | - | chr5.1:42293798-42293817 | MS.gene80135:intron | 15.0% |
| !! | AAAAGGGTTAAATATGTTTA+TGG | + | chr5.1:42296840-42296859 | None:intergenic | 20.0% |
| !! | AAATAATTTAGCGTCTATTT+AGG | + | chr5.1:42293581-42293600 | None:intergenic | 20.0% |
| !! | AATCAATTATATGATCAAAC+TGG | - | chr5.1:42296104-42296123 | MS.gene80135:intron | 20.0% |
| !! | AATGGAAATCATTTAAACAA+TGG | - | chr5.1:42296068-42296087 | MS.gene80135:intron | 20.0% |
| !! | ACATTCAAAATAATTGATCT+TGG | - | chr5.1:42295340-42295359 | MS.gene80135:intron | 20.0% |
| !! | CATAATATAATAACAAGACT+CGG | + | chr5.1:42294038-42294057 | None:intergenic | 20.0% |
| !! | CATCAAACACTTAATTTATT+AGG | + | chr5.1:42293199-42293218 | None:intergenic | 20.0% |
| !!! | AATAATAATACCTTTGAAGA+GGG | + | chr5.1:42293943-42293962 | None:intergenic | 20.0% |
| !!! | ATTTAAATTTTATGCTTCCT+TGG | - | chr5.1:42294986-42295005 | MS.gene80135:intron | 20.0% |
| !!! | CAAAGGTATTATTATTGTTA+TGG | - | chr5.1:42293947-42293966 | MS.gene80135:intron | 20.0% |
| !!! | GTCAAAAGAATTTTTTTATC+GGG | - | chr5.1:42296783-42296802 | MS.gene80135:CDS | 20.0% |
| !!! | GTTTCCTATATTTCTAATAA+TGG | - | chr5.1:42296050-42296069 | MS.gene80135:intron | 20.0% |
| !!! | TCAAAACTTGTTTATTTTAG+TGG | - | chr5.1:42296813-42296832 | MS.gene80135:CDS | 20.0% |
| !!! | TTATGACTTATGATACTTTT+TGG | - | chr5.1:42294316-42294335 | MS.gene80135:intron | 20.0% |
| !!! | TTATTTTTACTAACTTACAG+AGG | + | chr5.1:42293445-42293464 | None:intergenic | 20.0% |
| !!! | TTTTGCAGTTAAAATGATTA+TGG | - | chr5.1:42295978-42295997 | MS.gene80135:intron | 20.0% |
| ! | AAAAACTTTAAACGAGAGTA+TGG | - | chr5.1:42297064-42297083 | MS.gene80135:CDS | 25.0% |
| ! | AAATCATTTAAACAATGGCA+AGG | - | chr5.1:42296073-42296092 | MS.gene80135:intron | 25.0% |
| ! | AAATTTAGTGACGAAATTGA+AGG | - | chr5.1:42293749-42293768 | MS.gene80135:intron | 25.0% |
| ! | ACAAACATATCAAAAAAACC+AGG | + | chr5.1:42293066-42293085 | None:intergenic | 25.0% |
| ! | AGATAATTTATGGACCAAAT+AGG | - | chr5.1:42293717-42293736 | MS.gene80135:intron | 25.0% |
| ! | ATGATGACTATGACAATAAA+AGG | + | chr5.1:42296857-42296876 | None:intergenic | 25.0% |
| ! | ATTATTTGATACTCACCATT+TGG | + | chr5.1:42295829-42295848 | None:intergenic | 25.0% |
| ! | TATAGTGTTTCGTAAAATAG+TGG | - | chr5.1:42293309-42293328 | MS.gene80135:CDS | 25.0% |
| ! | TGATGACTATGACAATAAAA+GGG | + | chr5.1:42296856-42296875 | None:intergenic | 25.0% |
| ! | TGGTTATTTATGATCTCTAA+AGG | - | chr5.1:42295006-42295025 | MS.gene80135:intron | 25.0% |
| ! | TTAGAGATCATAAATAACCA+AGG | + | chr5.1:42295006-42295025 | None:intergenic | 25.0% |
| !! | ACATGTGCTATTATTAATGA+TGG | + | chr5.1:42295700-42295719 | None:intergenic | 25.0% |
| !! | AGAGATTTTCCATATAATGT+TGG | - | chr5.1:42294676-42294695 | MS.gene80135:CDS | 25.0% |
| !! | CAATAATAATACCTTTGAAG+AGG | + | chr5.1:42293944-42293963 | None:intergenic | 25.0% |
| !!! | ACTGAAATTACTTTTTTTGC+TGG | - | chr5.1:42296593-42296612 | MS.gene80135:intron | 25.0% |
| !!! | TTTTGTTTATGGTTTTCTTG+AGG | - | chr5.1:42294450-42294469 | MS.gene80135:CDS | 25.0% |
| AAAAGGGTTGAATAAGTTTG+TGG | + | chr5.1:42296918-42296937 | None:intergenic | 30.0% | |
| AAAATGAAGAACCAACTTGT+TGG | - | chr5.1:42294238-42294257 | MS.gene80135:CDS | 30.0% | |
| AACAAAAAATCCATCTTCCT+TGG | - | chr5.1:42292760-42292779 | MS.gene80135:CDS | 30.0% | |
| AACAACTATGAGGGAAAAAA+GGG | + | chr5.1:42296934-42296953 | None:intergenic | 30.0% | |
| AAGAGACTACCAACATTATA+TGG | + | chr5.1:42294688-42294707 | None:intergenic | 30.0% | |
| AAGCTATAAGCTCAAATTTG+TGG | - | chr5.1:42293541-42293560 | MS.gene80135:CDS | 30.0% | |
| AATTCAACCGTCAATTAAAG+AGG | - | chr5.1:42296202-42296221 | MS.gene80135:intron | 30.0% | |
| AGAGTTTGATTCTAAGTCTT+TGG | + | chr5.1:42292786-42292805 | None:intergenic | 30.0% | |
| AGATTTGATATCTACAGTAC+TGG | - | chr5.1:42295791-42295810 | MS.gene80135:intron | 30.0% | |
| ATTGACGGTTGAATTGTATA+AGG | + | chr5.1:42296197-42296216 | None:intergenic | 30.0% | |
| TAAGCGTGAAATAAGTGTTT+CGG | + | chr5.1:42294931-42294950 | None:intergenic | 30.0% | |
| TATCTATCATGCAAAATCTG+AGG | - | chr5.1:42296430-42296449 | MS.gene80135:intron | 30.0% | |
| TCAGAGAAAATAATGTTCTG+CGG | + | chr5.1:42295216-42295235 | None:intergenic | 30.0% | |
| TGTTATAAGCTAGCTAATAG+CGG | - | chr5.1:42293266-42293285 | MS.gene80135:intron | 30.0% | |
| TTCTTAGATATGATGAAGTC+AGG | - | chr5.1:42293990-42294009 | MS.gene80135:intron | 30.0% | |
| TTGTCATAGTCATCATCTTA+CGG | - | chr5.1:42296861-42296880 | MS.gene80135:CDS | 30.0% | |
| ! | AATTTTCACTCTCTCCTATT+TGG | + | chr5.1:42293734-42293753 | None:intergenic | 30.0% |
| ! | AGACTGATAAATTGATTCAC+TGG | + | chr5.1:42294786-42294805 | None:intergenic | 30.0% |
| ! | ATGTTTCGACCTGAAATTTT+TGG | + | chr5.1:42295059-42295078 | None:intergenic | 30.0% |
| ! | CAGAACATTATTTTCTCTGA+AGG | - | chr5.1:42295216-42295235 | MS.gene80135:CDS | 30.0% |
| ! | CATTCCTAAAGAGTTTCTTT+TGG | - | chr5.1:42295396-42295415 | MS.gene80135:CDS | 30.0% |
| ! | CATTTTATATAGGCATTTCC+TGG | - | chr5.1:42296153-42296172 | MS.gene80135:intron | 30.0% |
| ! | GTGCTATTATTAATGATGGA+TGG | + | chr5.1:42295696-42295715 | None:intergenic | 30.0% |
| ! | TAACAAACCTTTCTGAAAGT+AGG | + | chr5.1:42293117-42293136 | None:intergenic | 30.0% |
| ! | TATTAGGAGTGTAACAGATT+AGG | + | chr5.1:42293183-42293202 | None:intergenic | 30.0% |
| ! | TTCTTGAGGTAAGGATTTTT+GGG | - | chr5.1:42294464-42294483 | MS.gene80135:CDS | 30.0% |
| ! | TTGTCATTTACTATTTGCAG+AGG | - | chr5.1:42294575-42294594 | MS.gene80135:intron | 30.0% |
| ! | TTTATGGTTTTCTTGAGGTA+AGG | - | chr5.1:42294455-42294474 | MS.gene80135:CDS | 30.0% |
| ! | TTTCTTGAGGTAAGGATTTT+TGG | - | chr5.1:42294463-42294482 | MS.gene80135:CDS | 30.0% |
| ! | TTTTATTAACCATGGTCTCA+GGG | - | chr5.1:42295311-42295330 | MS.gene80135:intron | 30.0% |
| ! | TTTTTATTAACCATGGTCTC+AGG | - | chr5.1:42295310-42295329 | MS.gene80135:intron | 30.0% |
| ! | TTTTTCTATCAAGGCTACAA+AGG | - | chr5.1:42293363-42293382 | MS.gene80135:CDS | 30.0% |
| !! | AATATGGTGCTGTAGAAATT+TGG | - | chr5.1:42294383-42294402 | MS.gene80135:intron | 30.0% |
| !! | AGCAAGAAATGATGGATAAA+TGG | + | chr5.1:42296961-42296980 | None:intergenic | 30.0% |
| !! | CTATTTGTTATTGCTGAGAA+CGG | - | chr5.1:42293829-42293848 | MS.gene80135:intron | 30.0% |
| !! | TTGTTCTTGCTTTTGTTGAA+AGG | - | chr5.1:42293082-42293101 | MS.gene80135:intron | 30.0% |
| !!! | AAGGAAGATGGATTTTTTGT+TGG | + | chr5.1:42292761-42292780 | None:intergenic | 30.0% |
| !!! | AGGAAGATGGATTTTTTGTT+GGG | + | chr5.1:42292760-42292779 | None:intergenic | 30.0% |
| AAAATCAGGAACAGAAAAGG+AGG | - | chr5.1:42296521-42296540 | MS.gene80135:intron | 35.0% | |
| AAAGTCATCTGAAGATACCT+TGG | + | chr5.1:42295424-42295443 | None:intergenic | 35.0% | |
| AAAGTTGTTACGTGACTGAA+AGG | + | chr5.1:42296724-42296743 | None:intergenic | 35.0% | |
| AAATCAGGAACAGAAAAGGA+GGG | - | chr5.1:42296522-42296541 | MS.gene80135:intron | 35.0% | |
| AAGCCTTCTTTGTCAAAGTA+AGG | + | chr5.1:42296402-42296421 | None:intergenic | 35.0% | |
| AAGGATTGTACACAACATGA+GGG | + | chr5.1:42295551-42295570 | None:intergenic | 35.0% | |
| ACTTTCATCCCTCCAAAAAT+AGG | + | chr5.1:42296765-42296784 | None:intergenic | 35.0% | |
| AGTCACACCTCTTTAATTGA+CGG | + | chr5.1:42296212-42296231 | None:intergenic | 35.0% | |
| ATAAGCTCATGAGAAAGTGA+CGG | - | chr5.1:42293468-42293487 | MS.gene80135:CDS | 35.0% | |
| ATCCTTCCATTTCAGATATG+CGG | - | chr5.1:42295565-42295584 | MS.gene80135:intron | 35.0% | |
| ATTCAGCTTATGGCAAAATC+AGG | - | chr5.1:42296507-42296526 | MS.gene80135:intron | 35.0% | |
| ATTTGATACTCACCATTTGG+AGG | + | chr5.1:42295826-42295845 | None:intergenic | 35.0% | |
| CAAAGAAGACTCCTGAATAT+TGG | - | chr5.1:42294602-42294621 | MS.gene80135:intron | 35.0% | |
| CAACAACTATGAGGGAAAAA+AGG | + | chr5.1:42296935-42296954 | None:intergenic | 35.0% | |
| CACATGATATACCAACAAGT+TGG | + | chr5.1:42294252-42294271 | None:intergenic | 35.0% | |
| CATAAGCTGAATAATCCACT+TGG | + | chr5.1:42296499-42296518 | None:intergenic | 35.0% | |
| CATCCTTACTTTGACAAAGA+AGG | - | chr5.1:42296396-42296415 | MS.gene80135:intron | 35.0% | |
| CTCCATATAAGCCAATATTC+AGG | + | chr5.1:42294616-42294635 | None:intergenic | 35.0% | |
| CTGTAGATATCAAATCTGTC+AGG | + | chr5.1:42295788-42295807 | None:intergenic | 35.0% | |
| CTTTCATCCCTCCAAAAATA+GGG | + | chr5.1:42296764-42296783 | None:intergenic | 35.0% | |
| CTTTCTAACTTGAGTCATCA+AGG | + | chr5.1:42295513-42295532 | None:intergenic | 35.0% | |
| GGATCCAAAAGAAACTCTTT+AGG | + | chr5.1:42295403-42295422 | None:intergenic | 35.0% | |
| GTATCACTGTCTTACTTGTT+TGG | - | chr5.1:42294487-42294506 | MS.gene80135:CDS | 35.0% | |
| GTATCGAAAGAAATGACATG+TGG | + | chr5.1:42296634-42296653 | None:intergenic | 35.0% | |
| GTTTAGACCTACTTTCAGAA+AGG | - | chr5.1:42293107-42293126 | MS.gene80135:intron | 35.0% | |
| TAAACACAAACTTCGATCAG+TGG | + | chr5.1:42295456-42295475 | None:intergenic | 35.0% | |
| TACTTGTTTGGAGAAATCGA+AGG | - | chr5.1:42294499-42294518 | MS.gene80135:CDS | 35.0% | |
| TCCATCATTTCTTGCTTTGT+AGG | - | chr5.1:42296965-42296984 | MS.gene80135:CDS | 35.0% | |
| TCCTACAAAGCAAGAAATGA+TGG | + | chr5.1:42296969-42296988 | None:intergenic | 35.0% | |
| TGGTCTAATATTCCTCCAAA+TGG | - | chr5.1:42295811-42295830 | MS.gene80135:intron | 35.0% | |
| TGGTGCTTTGTCTTATCTTT+GGG | - | chr5.1:42293023-42293042 | MS.gene80135:intron | 35.0% | |
| TGTCATAGTCATCATCTTAC+GGG | - | chr5.1:42296862-42296881 | MS.gene80135:CDS | 35.0% | |
| TGTGTTTGTGAGATTTCAGT+TGG | - | chr5.1:42294268-42294287 | MS.gene80135:intron | 35.0% | |
| TTATCAGTCTTTCATCTGTG+AGG | - | chr5.1:42294796-42294815 | MS.gene80135:intron | 35.0% | |
| TTGACTAAAAAAGACCCGTT+TGG | + | chr5.1:42293497-42293516 | None:intergenic | 35.0% | |
| TTGCTGAGAACGGTTTATTA+TGG | - | chr5.1:42293839-42293858 | MS.gene80135:intron | 35.0% | |
| TTTGAGCTGTTGGATTTAGA+TGG | - | chr5.1:42296294-42296313 | MS.gene80135:intron | 35.0% | |
| ! | AAATGGTGTCAACAACTATG+AGG | + | chr5.1:42296944-42296963 | None:intergenic | 35.0% |
| ! | AAGAGTTTCTTTTGGATCCA+AGG | - | chr5.1:42295404-42295423 | MS.gene80135:CDS | 35.0% |
| ! | AATGGTGTCAACAACTATGA+GGG | + | chr5.1:42296943-42296962 | None:intergenic | 35.0% |
| ! | GCGTCTATTTAGGATCTATT+TGG | + | chr5.1:42293571-42293590 | None:intergenic | 35.0% |
| ! | GTTTATCAAGCCTGTTTTGT+CGG | + | chr5.1:42293683-42293702 | None:intergenic | 35.0% |
| ! | TCTTGAGGTAAGGATTTTTG+GGG | - | chr5.1:42294465-42294484 | MS.gene80135:CDS | 35.0% |
| ! | TTGGTGCTTTGTCTTATCTT+TGG | - | chr5.1:42293022-42293041 | MS.gene80135:intron | 35.0% |
| ! | TTTTCTCTTTCCAATCCCTT+TGG | + | chr5.1:42295108-42295127 | None:intergenic | 35.0% |
| !! | AAAACAGGAAAAGCATTTGG+TGG | - | chr5.1:42297099-42297118 | MS.gene80135:CDS | 35.0% |
| !! | AGCTGTGCAGATTTTGTTTA+TGG | - | chr5.1:42294439-42294458 | MS.gene80135:CDS | 35.0% |
| !! | ATTTAGATGGTGGAATAGGA+TGG | - | chr5.1:42296307-42296326 | MS.gene80135:intron | 35.0% |
| !! | CAAGTGGATTATTCAGCTTA+TGG | - | chr5.1:42296497-42296516 | MS.gene80135:intron | 35.0% |
| !! | CTCCTGAATATTGGCTTATA+TGG | - | chr5.1:42294611-42294630 | MS.gene80135:intron | 35.0% |
| !! | CTGAATATTGGCTTATATGG+AGG | - | chr5.1:42294614-42294633 | MS.gene80135:CDS | 35.0% |
| !! | GCAAAAACAGGAAAAGCATT+TGG | - | chr5.1:42297096-42297115 | MS.gene80135:CDS | 35.0% |
| !! | TGAGATTTCAGTTGGTCTTT+GGG | - | chr5.1:42294276-42294295 | MS.gene80135:intron | 35.0% |
| !! | TTGGATTTAGATGGTGGAAT+AGG | - | chr5.1:42296303-42296322 | MS.gene80135:intron | 35.0% |
| !! | TTTAGATGGTGGAATAGGAT+GGG | - | chr5.1:42296308-42296327 | MS.gene80135:intron | 35.0% |
| !!! | GATTTTTTGTTGGGGTTGTA+GGG | + | chr5.1:42292751-42292770 | None:intergenic | 35.0% |
| !!! | GGAAGATGGATTTTTTGTTG+GGG | + | chr5.1:42292759-42292778 | None:intergenic | 35.0% |
| !!! | GGCAGGATGATTTTGTTTTA+GGG | - | chr5.1:42293860-42293879 | MS.gene80135:intron | 35.0% |
| !!! | TGATACTTTTTGGTTCTCAC+TGG | - | chr5.1:42294326-42294345 | MS.gene80135:intron | 35.0% |
| !!! | TGGCAGGATGATTTTGTTTT+AGG | - | chr5.1:42293859-42293878 | MS.gene80135:intron | 35.0% |
| !!! | TTTGTTTTAGGGAAGAAGCT+GGG | - | chr5.1:42293871-42293890 | MS.gene80135:intron | 35.0% |
| !!! | TTTTGTTTTAGGGAAGAAGC+TGG | - | chr5.1:42293870-42293889 | MS.gene80135:intron | 35.0% |
| AATCCATTCAGCACCATGAA+TGG | + | chr5.1:42292860-42292879 | None:intergenic | 40.0% | |
| AATTCCTTTGGTTGCAACAG+TGG | + | chr5.1:42292710-42292729 | None:intergenic | 40.0% | |
| ACAAGATTTGCCAAAGGGAT+TGG | - | chr5.1:42295095-42295114 | MS.gene80135:intron | 40.0% | |
| ACATTCAAGCCACTAGACTT+AGG | + | chr5.1:42292976-42292995 | None:intergenic | 40.0% | |
| ACTCAACTGGTATTGTGCAT+AGG | - | chr5.1:42295181-42295200 | MS.gene80135:CDS | 40.0% | |
| ACTCTGCAATAGATCAGCTA+AGG | + | chr5.1:42294656-42294675 | None:intergenic | 40.0% | |
| ACTGTTGCAACCAAAGGAAT+TGG | - | chr5.1:42292709-42292728 | MS.gene80135:CDS | 40.0% | |
| AGAAAGTGACGGTTACCAAA+CGG | - | chr5.1:42293479-42293498 | MS.gene80135:CDS | 40.0% | |
| AGTTTAACCTGCCATAAGAC+TGG | + | chr5.1:42295662-42295681 | None:intergenic | 40.0% | |
| ATCACCACAAAAGCCATTCA+TGG | - | chr5.1:42292844-42292863 | MS.gene80135:CDS | 40.0% | |
| CAAAAGCAAGAACAACACCA+GGG | + | chr5.1:42293005-42293024 | None:intergenic | 40.0% | |
| CAACACCAACACCTACAAAA+AGG | + | chr5.1:42292900-42292919 | None:intergenic | 40.0% | |
| CAACTCTTGTTCGCATTAGA+CGG | - | chr5.1:42295153-42295172 | MS.gene80135:intron | 40.0% | |
| CAATGGTCCGATATAAAGCA+AGG | - | chr5.1:42296343-42296362 | MS.gene80135:intron | 40.0% | |
| CTCAACTGGTATTGTGCATA+GGG | - | chr5.1:42295182-42295201 | MS.gene80135:CDS | 40.0% | |
| CTTCAGCTCTTAAAGTGCAA+AGG | - | chr5.1:42297033-42297052 | MS.gene80135:CDS | 40.0% | |
| CTTGGTTGTTAGTTGTTGGT+CGG | + | chr5.1:42294145-42294164 | None:intergenic | 40.0% | |
| CTTTGACAAAGAAGGCTTGT+TGG | - | chr5.1:42296404-42296423 | MS.gene80135:intron | 40.0% | |
| CTTTGTGACTCCAATTCCTT+TGG | + | chr5.1:42292722-42292741 | None:intergenic | 40.0% | |
| GAAGGATTGTACACAACATG+AGG | + | chr5.1:42295552-42295571 | None:intergenic | 40.0% | |
| GAGGTACAAGATTTGCCAAA+GGG | - | chr5.1:42295090-42295109 | MS.gene80135:intron | 40.0% | |
| GCCTTTGCCTTGCTTTATAT+CGG | + | chr5.1:42296353-42296372 | None:intergenic | 40.0% | |
| GCTTATATGGAGGTTTGAAG+GGG | - | chr5.1:42294624-42294643 | MS.gene80135:CDS | 40.0% | |
| GGCAAAATCAGGAACAGAAA+AGG | - | chr5.1:42296518-42296537 | MS.gene80135:intron | 40.0% | |
| GGCTTATATGGAGGTTTGAA+GGG | - | chr5.1:42294623-42294642 | MS.gene80135:CDS | 40.0% | |
| GTTTCAACCAATGGACACAT+GGG | + | chr5.1:42293615-42293634 | None:intergenic | 40.0% | |
| TCCGATATAAAGCAAGGCAA+AGG | - | chr5.1:42296349-42296368 | MS.gene80135:intron | 40.0% | |
| TGAGAACGGTTTATTATGGC+AGG | - | chr5.1:42293843-42293862 | MS.gene80135:intron | 40.0% | |
| TGATTCTAAGTCTTTGGCCA+AGG | + | chr5.1:42292780-42292799 | None:intergenic | 40.0% | |
| TGGCTTATATGGAGGTTTGA+AGG | - | chr5.1:42294622-42294641 | MS.gene80135:CDS | 40.0% | |
| TTGAAGAAGGCGACTGAATA+TGG | - | chr5.1:42294367-42294386 | MS.gene80135:intron | 40.0% | |
| ! | AAAGAGGTGTGACTATGACT+TGG | - | chr5.1:42296218-42296237 | MS.gene80135:intron | 40.0% |
| ! | AAGGCTTGGTTGTTAGTTGT+TGG | + | chr5.1:42294149-42294168 | None:intergenic | 40.0% |
| ! | ATGGGAACTTTTGACGTCAA+TGG | - | chr5.1:42296326-42296345 | MS.gene80135:intron | 40.0% |
| ! | CACAACCTTTTTGTAGGTGT+TGG | - | chr5.1:42292892-42292911 | MS.gene80135:intron | 40.0% |
| ! | CAGTCTTGTATTTGTCAACG+AGG | + | chr5.1:42295947-42295966 | None:intergenic | 40.0% |
| ! | GTGATGGTGCCAAAAATTTC+AGG | - | chr5.1:42295047-42295066 | MS.gene80135:intron | 40.0% |
| ! | TCAGCTCACAACCTTTTTGT+AGG | - | chr5.1:42292886-42292905 | MS.gene80135:intron | 40.0% |
| !! | AGGTGACTTAGTCTTGAAGA+AGG | - | chr5.1:42294354-42294373 | MS.gene80135:intron | 40.0% |
| !! | CAGGTCGAAACATTGATTCT+TGG | - | chr5.1:42295066-42295085 | MS.gene80135:intron | 40.0% |
| !! | GTGAGATTTCAGTTGGTCTT+TGG | - | chr5.1:42294275-42294294 | MS.gene80135:intron | 40.0% |
| !!! | AAATTTTTGGCACCATCACC+GGG | + | chr5.1:42295046-42295065 | None:intergenic | 40.0% |
| !!! | ACTTTTTGGTTCTCACTGGA+AGG | - | chr5.1:42294330-42294349 | MS.gene80135:intron | 40.0% |
| !!! | CTTTTTGTAGGTGTTGGTGT+TGG | - | chr5.1:42292898-42292917 | MS.gene80135:intron | 40.0% |
| !!! | GAAATTTTTGGCACCATCAC+CGG | + | chr5.1:42295047-42295066 | None:intergenic | 40.0% |
| !!! | GGATTTTTTGTTGGGGTTGT+AGG | + | chr5.1:42292752-42292771 | None:intergenic | 40.0% |
| !!! | GTTTTTTCGAGCAACACAAC+AGG | - | chr5.1:42296458-42296477 | MS.gene80135:intron | 40.0% |
| !!! | TTGTTTTAGGGAAGAAGCTG+GGG | - | chr5.1:42293872-42293891 | MS.gene80135:intron | 40.0% |
| AAAAAACCAGGAGCAACACC+AGG | + | chr5.1:42293054-42293073 | None:intergenic | 45.0% | |
| AAGTCTTTGGCCAAGGAAGA+TGG | + | chr5.1:42292773-42292792 | None:intergenic | 45.0% | |
| AGATGCGTACTCTAAGTTCC+TGG | + | chr5.1:42296569-42296588 | None:intergenic | 45.0% | |
| AGCACTCTTCCTAAGTCTAG+TGG | - | chr5.1:42292964-42292983 | MS.gene80135:intron | 45.0% | |
| ATGAAGTCAGGATACGAGCT+GGG | - | chr5.1:42294002-42294021 | MS.gene80135:intron | 45.0% | |
| ATGAATCTTGCACTGCATGG+TGG | + | chr5.1:42292826-42292845 | None:intergenic | 45.0% | |
| ATTATGGAGAAGCTGCCAAG+TGG | - | chr5.1:42296481-42296500 | MS.gene80135:intron | 45.0% | |
| ATTCACTGAAGCTCAACTCC+AGG | - | chr5.1:42296548-42296567 | MS.gene80135:intron | 45.0% | |
| CAAACTTCGATCAGTGGAGT+AGG | + | chr5.1:42295450-42295469 | None:intergenic | 45.0% | |
| CCAAAAGCAAGAACAACACC+AGG | + | chr5.1:42293006-42293025 | None:intergenic | 45.0% | |
| CGAGCAACACAACAGGATTA+TGG | - | chr5.1:42296465-42296484 | MS.gene80135:intron | 45.0% | |
| CGAGGTACAAGATTTGCCAA+AGG | - | chr5.1:42295089-42295108 | MS.gene80135:intron | 45.0% | |
| CGTTTCAACCAATGGACACA+TGG | + | chr5.1:42293616-42293635 | None:intergenic | 45.0% | |
| CTAACTTGAGCCGACAAAAC+AGG | - | chr5.1:42293670-42293689 | MS.gene80135:intron | 45.0% | |
| CTATTATCAGAGCGTAAGCC+AGG | + | chr5.1:42296174-42296193 | None:intergenic | 45.0% | |
| GAAAGTGACGGTTACCAAAC+GGG | - | chr5.1:42293480-42293499 | MS.gene80135:CDS | 45.0% | |
| GAGCTGTTGGATTTAGATGG+TGG | - | chr5.1:42296297-42296316 | MS.gene80135:intron | 45.0% | |
| GGAAATTGTGCCCAAGAAGA+AGG | - | chr5.1:42296986-42297005 | MS.gene80135:CDS | 45.0% | |
| GGTTGCATGGAGAAAAACTG+TGG | - | chr5.1:42296239-42296258 | MS.gene80135:intron | 45.0% | |
| GTGATGAATCTTGCACTGCA+TGG | + | chr5.1:42292829-42292848 | None:intergenic | 45.0% | |
| GTGCTCATAATGTACTGCTC+TGG | + | chr5.1:42295593-42295612 | None:intergenic | 45.0% | |
| GTTACGTGACATCTCTCAAC+AGG | + | chr5.1:42296661-42296680 | None:intergenic | 45.0% | |
| TCCATAACCCATGTGTCCAT+TGG | - | chr5.1:42293605-42293624 | MS.gene80135:CDS | 45.0% | |
| TCTTATCTTTGGGCTACACC+TGG | - | chr5.1:42293033-42293052 | MS.gene80135:intron | 45.0% | |
| TGGATGAGCTCAGCAAAAAC+AGG | - | chr5.1:42297084-42297103 | MS.gene80135:CDS | 45.0% | |
| TTACGTGACTGAAAGGTCAC+CGG | + | chr5.1:42296717-42296736 | None:intergenic | 45.0% | |
| TTAGACGGTCTTCACTCAAC+TGG | - | chr5.1:42295168-42295187 | MS.gene80135:CDS | 45.0% | |
| ! | AAAGCATTTGGTGGAGGAGA+TGG | - | chr5.1:42297108-42297127 | MS.gene80135:CDS | 45.0% |
| ! | AAGCCATTCATGGTGCTGAA+TGG | - | chr5.1:42292854-42292873 | MS.gene80135:intron | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr5.1:42294162-42294181 | MS.gene80135:intron | 45.0% |
| ! | ACCAATGGACACATGGGTTA+TGG | + | chr5.1:42293609-42293628 | None:intergenic | 45.0% |
| ! | AGCACCATGAATGGCTTTTG+TGG | + | chr5.1:42292851-42292870 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr5.1:42294161-42294180 | MS.gene80135:intron | 45.0% |
| ! | TACCTTTGAAGAGGGCTTCT+TGG | + | chr5.1:42293935-42293954 | None:intergenic | 45.0% |
| ! | TGCCGCATATCTGAAATGGA+AGG | + | chr5.1:42295570-42295589 | None:intergenic | 45.0% |
| ! | TGTGTCCATTGGTTGAAACG+AGG | - | chr5.1:42293616-42293635 | MS.gene80135:CDS | 45.0% |
| ! | TTTTGTTGGGGTTGTAGGGA+TGG | + | chr5.1:42292747-42292766 | None:intergenic | 45.0% |
| !! | ACAGGAAAAGCATTTGGTGG+AGG | - | chr5.1:42297102-42297121 | MS.gene80135:CDS | 45.0% |
| !! | CGAAACATTGATTCTTGGCG+AGG | - | chr5.1:42295071-42295090 | MS.gene80135:intron | 45.0% |
| !! | GTGACTATGACTTGGTTGCA+TGG | - | chr5.1:42296226-42296245 | MS.gene80135:intron | 45.0% |
| !! | TTTGGTTCTCACTGGAAGGA+AGG | - | chr5.1:42294334-42294353 | MS.gene80135:intron | 45.0% |
| !!! | AATTTTTGGCACCATCACCG+GGG | + | chr5.1:42295045-42295064 | None:intergenic | 45.0% |
| !!! | CAAGGCTCCCTATTTTTGGA+GGG | - | chr5.1:42296754-42296773 | MS.gene80135:CDS | 45.0% |
| !!! | CCTGGTGTTGTTCTTGCTTT+TGG | - | chr5.1:42293003-42293022 | MS.gene80135:intron | 45.0% |
| !!! | CTGTTTTGTCGGCTCAAGTT+AGG | + | chr5.1:42293672-42293691 | None:intergenic | 45.0% |
| !!! | TGTTTTAGGGAAGAAGCTGG+GGG | - | chr5.1:42293873-42293892 | MS.gene80135:intron | 45.0% |
| AAAACTGTGGAGCCTCGATG+TGG | - | chr5.1:42296252-42296271 | MS.gene80135:intron | 50.0% | |
| AATCTTGCACTGCATGGTGG+TGG | + | chr5.1:42292823-42292842 | None:intergenic | 50.0% | |
| ACAACTTTACCGTTGCGCCA+AGG | - | chr5.1:42296736-42296755 | MS.gene80135:CDS | 50.0% | |
| AGCCAAGAAGCCCTCTTCAA+AGG | - | chr5.1:42293930-42293949 | MS.gene80135:intron | 50.0% | |
| ATGGCCACTGTTGCAACCAA+AGG | - | chr5.1:42292703-42292722 | MS.gene80135:CDS | 50.0% | |
| ATTGTGCCCAAGAAGAAGGC+TGG | - | chr5.1:42296990-42297009 | MS.gene80135:CDS | 50.0% | |
| CAGAGCCTCGTTTCAACCAA+TGG | + | chr5.1:42293624-42293643 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr5.1:42294163-42294182 | None:intergenic | 50.0% | |
| CCTCCAAAAATAGGGAGCCT+TGG | + | chr5.1:42296756-42296775 | None:intergenic | 50.0% | |
| CTGCACTCTCTCCAGTCTTA+TGG | - | chr5.1:42295648-42295667 | MS.gene80135:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr5.1:42294166-42294185 | MS.gene80135:intron | 50.0% | |
| GATGAAGTCAGGATACGAGC+TGG | - | chr5.1:42294001-42294020 | MS.gene80135:intron | 50.0% | |
| GGCTTGAATGTTACTGTCCC+TGG | - | chr5.1:42292985-42293004 | MS.gene80135:intron | 50.0% | |
| TCAGGAACAGAAAAGGAGGG+TGG | - | chr5.1:42296525-42296544 | MS.gene80135:intron | 50.0% | |
| TGAAGTCAGGATACGAGCTG+GGG | - | chr5.1:42294003-42294022 | MS.gene80135:intron | 50.0% | |
| TGGACTTCCATGCACTGTGA+TGG | - | chr5.1:42292918-42292937 | MS.gene80135:intron | 50.0% | |
| TGTGCACCAGCCTTCTTCTT+GGG | + | chr5.1:42296999-42297018 | None:intergenic | 50.0% | |
| TTGTGCACCAGCCTTCTTCT+TGG | + | chr5.1:42297000-42297019 | None:intergenic | 50.0% | |
| TTTGCTGGACACTCGACAGA+TGG | - | chr5.1:42296608-42296627 | MS.gene80135:intron | 50.0% | |
| ! | ACTCTCTCCAGTCTTATGGC+AGG | - | chr5.1:42295652-42295671 | MS.gene80135:intron | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr5.1:42294160-42294179 | MS.gene80135:intron | 50.0% |
| !! | CTGGTGCCGCATATCTGAAA+TGG | + | chr5.1:42295574-42295593 | None:intergenic | 50.0% |
| !! | TAGGAGAGGCTTTGAGCTGT+TGG | - | chr5.1:42296284-42296303 | MS.gene80135:intron | 50.0% |
| !!! | CCAAGGCTCCCTATTTTTGG+AGG | - | chr5.1:42296753-42296772 | MS.gene80135:CDS | 50.0% |
| AAGCTGGGGGAGGGATCATT+TGG | - | chr5.1:42293886-42293905 | MS.gene80135:intron | 55.0% | |
| AATAGGGAGCCTTGGCGCAA+CGG | + | chr5.1:42296748-42296767 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr5.1:42294175-42294194 | None:intergenic | 55.0% | |
| CCACACTCCATCACAGTGCA+TGG | + | chr5.1:42292928-42292947 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr5.1:42294168-42294187 | None:intergenic | 55.0% | |
| CTAAGTTCAGCGCCACATCG+AGG | + | chr5.1:42296267-42296286 | None:intergenic | 55.0% | |
| GAAGTCAGGATACGAGCTGG+GGG | - | chr5.1:42294004-42294023 | MS.gene80135:intron | 55.0% | |
| GAGGAGATGGATCCCAAGAG+AGG | - | chr5.1:42297121-42297140 | MS.gene80135:CDS | 55.0% | |
| GCAGTTGCAACTGGAGCTGA+GGG | + | chr5.1:42295632-42295651 | None:intergenic | 55.0% | |
| GCTGCTACAGACTTGCGAGT+TGG | - | chr5.1:42295364-42295383 | MS.gene80135:intron | 55.0% | |
| TGCAGTTGCAACTGGAGCTG+AGG | + | chr5.1:42295633-42295652 | None:intergenic | 55.0% | |
| TGTACGAGACCCTGAGACCA+TGG | + | chr5.1:42295323-42295342 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr5.1:42294174-42294193 | None:intergenic | 55.0% | |
| TTAGGGAAGAAGCTGGGGGA+GGG | - | chr5.1:42293877-42293896 | MS.gene80135:intron | 55.0% | |
| TTTAGGGAAGAAGCTGGGGG+AGG | - | chr5.1:42293876-42293895 | MS.gene80135:intron | 55.0% | |
| ! | CCATGCACTGTGATGGAGTG+TGG | - | chr5.1:42292925-42292944 | MS.gene80135:intron | 55.0% |
| ! | CTCGATGTGGCGCTGAACTT+AGG | - | chr5.1:42296265-42296284 | MS.gene80135:intron | 55.0% |
| ! | GCGCCAAGGCTCCCTATTTT+TGG | - | chr5.1:42296750-42296769 | MS.gene80135:CDS | 55.0% |
| ! | GGAGAGAGTGCAGTTGCAAC+TGG | + | chr5.1:42295641-42295660 | None:intergenic | 55.0% |
| ! | TGTGGCGCTGAACTTAGGAG+AGG | - | chr5.1:42296270-42296289 | MS.gene80135:intron | 55.0% |
| AAGGTCGCCAGTATCAGCCC+CGG | - | chr5.1:42295025-42295044 | MS.gene80135:intron | 60.0% | |
| ACCATCACCGGGGCTGATAC+TGG | + | chr5.1:42295035-42295054 | None:intergenic | 60.0% | |
| ! | ACTGGAGCTGAGGGTGCAGA+TGG | + | chr5.1:42295623-42295642 | None:intergenic | 60.0% |
| !! | CTTGCACTGCATGGTGGTGG+TGG | + | chr5.1:42292820-42292839 | None:intergenic | 60.0% |
| !! | GCTACACCTGGTGTTGCTCC+TGG | - | chr5.1:42293045-42293064 | MS.gene80135:intron | 60.0% |
| GCCAGTATCAGCCCCGGTGA+TGG | - | chr5.1:42295031-42295050 | MS.gene80135:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 42292703 | 42297148 | 42292703 | ID=MS.gene80135 |
| chr5.1 | mRNA | 42292703 | 42297148 | 42292703 | ID=MS.gene80135.t1;Parent=MS.gene80135 |
| chr5.1 | exon | 42296723 | 42297148 | 42296723 | ID=MS.gene80135.t1.exon1;Parent=MS.gene80135.t1 |
| chr5.1 | CDS | 42296723 | 42297148 | 42296723 | ID=cds.MS.gene80135.t1;Parent=MS.gene80135.t1 |
| chr5.1 | exon | 42295900 | 42295986 | 42295900 | ID=MS.gene80135.t1.exon2;Parent=MS.gene80135.t1 |
| chr5.1 | CDS | 42295900 | 42295986 | 42295900 | ID=cds.MS.gene80135.t1;Parent=MS.gene80135.t1 |
| chr5.1 | exon | 42295380 | 42295499 | 42295380 | ID=MS.gene80135.t1.exon3;Parent=MS.gene80135.t1 |
| chr5.1 | CDS | 42295380 | 42295499 | 42295380 | ID=cds.MS.gene80135.t1;Parent=MS.gene80135.t1 |
| chr5.1 | exon | 42295158 | 42295256 | 42295158 | ID=MS.gene80135.t1.exon4;Parent=MS.gene80135.t1 |
| chr5.1 | CDS | 42295158 | 42295256 | 42295158 | ID=cds.MS.gene80135.t1;Parent=MS.gene80135.t1 |
| chr5.1 | exon | 42294614 | 42294782 | 42294614 | ID=MS.gene80135.t1.exon5;Parent=MS.gene80135.t1 |
| chr5.1 | CDS | 42294614 | 42294782 | 42294614 | ID=cds.MS.gene80135.t1;Parent=MS.gene80135.t1 |
| chr5.1 | exon | 42294426 | 42294519 | 42294426 | ID=MS.gene80135.t1.exon6;Parent=MS.gene80135.t1 |
| chr5.1 | CDS | 42294426 | 42294519 | 42294426 | ID=cds.MS.gene80135.t1;Parent=MS.gene80135.t1 |
| chr5.1 | exon | 42294178 | 42294271 | 42294178 | ID=MS.gene80135.t1.exon7;Parent=MS.gene80135.t1 |
| chr5.1 | CDS | 42294178 | 42294271 | 42294178 | ID=cds.MS.gene80135.t1;Parent=MS.gene80135.t1 |
| chr5.1 | exon | 42294019 | 42294075 | 42294019 | ID=MS.gene80135.t1.exon8;Parent=MS.gene80135.t1 |
| chr5.1 | CDS | 42294019 | 42294075 | 42294019 | ID=cds.MS.gene80135.t1;Parent=MS.gene80135.t1 |
| chr5.1 | exon | 42293273 | 42293686 | 42293273 | ID=MS.gene80135.t1.exon9;Parent=MS.gene80135.t1 |
| chr5.1 | CDS | 42293273 | 42293686 | 42293273 | ID=cds.MS.gene80135.t1;Parent=MS.gene80135.t1 |
| chr5.1 | exon | 42292703 | 42292864 | 42292703 | ID=MS.gene80135.t1.exon10;Parent=MS.gene80135.t1 |
| chr5.1 | CDS | 42292703 | 42292864 | 42292703 | ID=cds.MS.gene80135.t1;Parent=MS.gene80135.t1 |
| Gene Sequence |
| Protein sequence |
