Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0393900 | XP_024634050.2 | 94.191 | 241 | 13 | 1 | 1 | 241 | 1 | 240 | 3.85e-163 | 470 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0393900 | I3SC45 | 94.191 | 241 | 13 | 1 | 1 | 241 | 1 | 240 | 1.84e-163 | 470 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012820 | Msa0393900 | 0.805270 | 1.447714e-49 | -8.615850e-47 |
| Msa0036230 | Msa0393900 | 0.822674 | 2.087531e-53 | -8.615850e-47 |
| Msa0036580 | Msa0393900 | 0.844407 | 7.705557e-59 | -8.615850e-47 |
| Msa0048950 | Msa0393900 | 0.804579 | 2.018692e-49 | -8.615850e-47 |
| Msa0059880 | Msa0393900 | 0.838225 | 3.262794e-57 | -8.615850e-47 |
| Msa0061600 | Msa0393900 | 0.827423 | 1.577754e-54 | -8.615850e-47 |
| Msa0084160 | Msa0393900 | 0.818081 | 2.361347e-52 | -8.615850e-47 |
| Msa0085710 | Msa0393900 | 0.808503 | 2.999615e-50 | -8.615850e-47 |
| Msa0093530 | Msa0393900 | 0.803796 | 2.938720e-49 | -8.615850e-47 |
| Msa0106130 | Msa0393900 | 0.815326 | 9.790532e-52 | -8.615850e-47 |
| Msa0126960 | Msa0393900 | 0.805195 | 1.501057e-49 | -8.615850e-47 |
| Msa0139270 | Msa0393900 | 0.844682 | 6.499973e-59 | -8.615850e-47 |
| Msa0139460 | Msa0393900 | 0.807303 | 5.399625e-50 | -8.615850e-47 |
| Msa0150910 | Msa0393900 | 0.812559 | 3.989244e-51 | -8.615850e-47 |
| Msa0176620 | Msa0393900 | 0.841104 | 5.817567e-58 | -8.615850e-47 |
| Msa0177550 | Msa0393900 | 0.801177 | 1.018204e-48 | -8.615850e-47 |
| Msa0197750 | Msa0393900 | 0.822917 | 1.832991e-53 | -8.615850e-47 |
| Msa0199860 | Msa0393900 | 0.817261 | 3.613562e-52 | -8.615850e-47 |
| Msa0202060 | Msa0393900 | 0.808541 | 2.944290e-50 | -8.615850e-47 |
| Msa0207970 | Msa0393900 | 0.817227 | 3.678714e-52 | -8.615850e-47 |
| Msa0222070 | Msa0393900 | -0.805148 | 1.535277e-49 | -8.615850e-47 |
| Msa0222120 | Msa0393900 | -0.806233 | 9.086305e-50 | -8.615850e-47 |
| Msa0225910 | Msa0393900 | 0.806573 | 7.703956e-50 | -8.615850e-47 |
| Msa0234120 | Msa0393900 | 0.820584 | 6.348541e-53 | -8.615850e-47 |
| Msa0236610 | Msa0393900 | 0.845733 | 3.378958e-59 | -8.615850e-47 |
| Msa0378000 | Msa0393900 | -0.802982 | 4.331731e-49 | -8.615850e-47 |
| Msa0393900 | Msa0414480 | 0.814148 | 1.785489e-51 | -8.615850e-47 |
| Msa0393900 | Msa0418150 | 0.815681 | 8.160316e-52 | -8.615850e-47 |
| Msa0393900 | Msa0418160 | 0.823949 | 1.051687e-53 | -8.615850e-47 |
| Msa0393900 | Msa0464300 | 0.836224 | 1.060475e-56 | -8.615850e-47 |
| Msa0393900 | Msa0464310 | 0.800615 | 1.326457e-48 | -8.615850e-47 |
| Msa0393900 | Msa0467800 | -0.817249 | 3.637256e-52 | -8.615850e-47 |
| Msa0393900 | Msa0467880 | -0.821837 | 3.264684e-53 | -8.615850e-47 |
| Msa0393900 | Msa0469550 | 0.807035 | 6.152878e-50 | -8.615850e-47 |
| Msa0393900 | Msa0515260 | 0.803488 | 3.403407e-49 | -8.615850e-47 |
| Msa0393900 | Msa0532670 | 0.802011 | 6.868250e-49 | -8.615850e-47 |
| Msa0393900 | Msa0533510 | 0.851589 | 8.045793e-61 | -8.615850e-47 |
| Msa0393900 | Msa0533520 | 0.863655 | 2.131705e-64 | -8.615850e-47 |
| Msa0393900 | Msa0538440 | 0.808646 | 2.795804e-50 | -8.615850e-47 |
| Msa0393900 | Msa0538450 | 0.808831 | 2.552336e-50 | -8.615850e-47 |
| Msa0393900 | Msa0538530 | 0.816170 | 6.347515e-52 | -8.615850e-47 |
| Msa0393900 | Msa0546740 | -0.804148 | 2.482473e-49 | -8.615850e-47 |
| Msa0393900 | Msa0548760 | 0.853944 | 1.709814e-61 | -8.615850e-47 |
| Msa0393900 | Msa0548770 | 0.806926 | 6.488837e-50 | -8.615850e-47 |
| Msa0393900 | Msa0554660 | 0.800632 | 1.315549e-48 | -8.615850e-47 |
| Msa0393900 | Msa0589450 | 0.817745 | 2.811948e-52 | -8.615850e-47 |
| Msa0393900 | Msa0589720 | 0.848959 | 4.394583e-60 | -8.615850e-47 |
| Msa0393900 | Msa0589730 | 0.842588 | 2.359138e-58 | -8.615850e-47 |
| Msa0393900 | Msa0589740 | 0.802723 | 4.900895e-49 | -8.615850e-47 |
| Msa0393900 | Msa0589750 | 0.801761 | 7.731129e-49 | -8.615850e-47 |
| Msa0393900 | Msa0591490 | 0.801373 | 9.282211e-49 | -8.615850e-47 |
| Msa0393900 | Msa0594320 | 0.811101 | 8.286320e-51 | -8.615850e-47 |
| Msa0393900 | Msa0594330 | 0.813449 | 2.545672e-51 | -8.615850e-47 |
| Msa0393900 | Msa0599600 | 0.842160 | 3.063867e-58 | -8.615850e-47 |
| Msa0393900 | Msa0603800 | 0.853310 | 2.599808e-61 | -8.615850e-47 |
| Msa0393900 | Msa0605460 | 0.819367 | 1.205642e-52 | -8.615850e-47 |
| Msa0393900 | Msa0605470 | 0.802804 | 4.715065e-49 | -8.615850e-47 |
| Msa0393900 | Msa0607300 | -0.802044 | 6.761493e-49 | -8.615850e-47 |
| Msa0393900 | Msa0630130 | 0.802623 | 5.139246e-49 | -8.615850e-47 |
| Msa0393900 | Msa0634290 | 0.810664 | 1.030242e-50 | -8.615850e-47 |
| Msa0393900 | Msa0645100 | 0.854768 | 9.877004e-62 | -8.615850e-47 |
| Msa0393900 | Msa0645120 | 0.859983 | 2.835726e-63 | -8.615850e-47 |
| Msa0393900 | Msa0646040 | 0.824553 | 7.582563e-54 | -8.615850e-47 |
| Msa0393900 | Msa0665910 | 0.825353 | 4.910213e-54 | -8.615850e-47 |
| Msa0393900 | Msa0667640 | 0.805809 | 1.116033e-49 | -8.615850e-47 |
| Msa0393900 | Msa0668210 | 0.839608 | 1.431577e-57 | -8.615850e-47 |
| Msa0393900 | Msa0668220 | 0.814547 | 1.457472e-51 | -8.615850e-47 |
| Msa0393900 | Msa0668230 | 0.809348 | 1.978236e-50 | -8.615850e-47 |
| Msa0393900 | Msa0670220 | 0.807240 | 5.567158e-50 | -8.615850e-47 |
| Msa0393900 | Msa0670360 | 0.814145 | 1.788516e-51 | -8.615850e-47 |
| Msa0393900 | Msa0671490 | 0.814251 | 1.694514e-51 | -8.615850e-47 |
| Msa0393900 | Msa0672780 | 0.800816 | 1.206928e-48 | -8.615850e-47 |
| Msa0393900 | Msa0678620 | 0.809070 | 2.269376e-50 | -8.615850e-47 |
| Msa0393900 | Msa0684590 | 0.849843 | 2.491844e-60 | -8.615850e-47 |
| Msa0393900 | Msa0684600 | 0.849098 | 4.020735e-60 | -8.615850e-47 |
| Msa0393900 | Msa0684620 | 0.808840 | 2.541620e-50 | -8.615850e-47 |
| Msa0393900 | Msa0690350 | -0.804241 | 2.374026e-49 | -8.615850e-47 |
| Msa0393900 | Msa0707780 | -0.800162 | 1.640148e-48 | -8.615850e-47 |
| Msa0393900 | Msa0711240 | 0.800315 | 1.526861e-48 | -8.615850e-47 |
| Msa0393900 | Msa0715260 | 0.846103 | 2.680247e-59 | -8.615850e-47 |
| Msa0393900 | Msa0716600 | 0.806567 | 7.727526e-50 | -8.615850e-47 |
| Msa0393900 | Msa0727480 | 0.805299 | 1.427754e-49 | -8.615850e-47 |
| Msa0393900 | Msa0747500 | 0.814431 | 1.545902e-51 | -8.615850e-47 |
| Msa0393900 | Msa0757240 | 0.847087 | 1.443904e-59 | -8.615850e-47 |
| Msa0393900 | Msa0793060 | -0.800485 | 1.409535e-48 | -8.615850e-47 |
| Msa0393900 | Msa0798230 | 0.854594 | 1.109363e-61 | -8.615850e-47 |
| Msa0393900 | Msa0824860 | 0.831941 | 1.254280e-55 | -8.615850e-47 |
| Msa0393900 | Msa0834270 | 0.803450 | 3.466806e-49 | -8.615850e-47 |
| Msa0393900 | Msa0836740 | 0.846220 | 2.490918e-59 | -8.615850e-47 |
| Msa0393900 | Msa0844100 | -0.800739 | 1.251209e-48 | -8.615850e-47 |
| Msa0393900 | Msa0854840 | 0.802749 | 4.840008e-49 | -8.615850e-47 |
| Msa0393900 | Msa0863840 | 0.809745 | 1.625591e-50 | -8.615850e-47 |
| Msa0393900 | Msa0863850 | 0.803433 | 3.493505e-49 | -8.615850e-47 |
| Msa0393900 | Msa0868870 | 0.805442 | 1.332619e-49 | -8.615850e-47 |
| Msa0393900 | Msa0883610 | 0.811166 | 8.020082e-51 | -8.615850e-47 |
| Msa0393900 | Msa0883640 | 0.815062 | 1.120509e-51 | -8.615850e-47 |
| Msa0393900 | Msa0896920 | 0.810701 | 1.011311e-50 | -8.615850e-47 |
| Msa0393900 | Msa0896990 | 0.811976 | 5.347470e-51 | -8.615850e-47 |
| Msa0393900 | Msa0910830 | 0.816394 | 5.657699e-52 | -8.615850e-47 |
| Msa0393900 | Msa0932900 | 0.800521 | 1.386312e-48 | -8.615850e-47 |
| Msa0393900 | Msa0932930 | 0.817564 | 3.088418e-52 | -8.615850e-47 |
| Msa0393900 | Msa0951060 | 0.815364 | 9.599778e-52 | -8.615850e-47 |
| Msa0393900 | Msa0960090 | 0.815620 | 8.420225e-52 | -8.615850e-47 |
| Msa0393900 | Msa0967820 | 0.806922 | 6.502338e-50 | -8.615850e-47 |
| Msa0393900 | Msa0985250 | 0.820512 | 6.596219e-53 | -8.615850e-47 |
| Msa0393900 | Msa0985700 | 0.816697 | 4.839482e-52 | -8.615850e-47 |
| Msa0393900 | Msa0996940 | 0.818841 | 1.587738e-52 | -8.615850e-47 |
| Msa0393900 | Msa1003240 | 0.805617 | 1.224585e-49 | -8.615850e-47 |
| Msa0393900 | Msa1026050 | 0.806476 | 8.075622e-50 | -8.615850e-47 |
| Msa0393900 | Msa1030430 | -0.800158 | 1.643401e-48 | -8.615850e-47 |
| Msa0393900 | Msa1046220 | 0.831947 | 1.250303e-55 | -8.615850e-47 |
| Msa0393900 | Msa1061670 | 0.828988 | 6.620144e-55 | -8.615850e-47 |
| Msa0393900 | Msa1064940 | 0.806405 | 8.357565e-50 | -8.615850e-47 |
| Msa0393900 | Msa1079610 | -0.805535 | 1.273689e-49 | -8.615850e-47 |
| Msa0393900 | Msa1087380 | 0.813504 | 2.475422e-51 | -8.615850e-47 |
| Msa0393900 | Msa1106960 | 0.816203 | 6.241421e-52 | -8.615850e-47 |
| Msa0393900 | Msa1109880 | 0.815709 | 8.043340e-52 | -8.615850e-47 |
| Msa0393900 | Msa1109890 | 0.853193 | 2.809135e-61 | -8.615850e-47 |
| Msa0393900 | Msa1110040 | 0.800531 | 1.379374e-48 | -8.615850e-47 |
| Msa0393900 | Msa1112730 | 0.821044 | 4.976754e-53 | -8.615850e-47 |
| Msa0393900 | Msa1142860 | 0.800281 | 1.551095e-48 | -8.615850e-47 |
| Msa0393900 | Msa1173290 | 0.812022 | 5.224288e-51 | -8.615850e-47 |
| Msa0393900 | Msa1207480 | 0.828629 | 8.085917e-55 | -8.615850e-47 |
| Msa0393900 | Msa1211160 | 0.826768 | 2.263366e-54 | -8.615850e-47 |
| Msa0393900 | Msa1214900 | -0.804131 | 2.503106e-49 | -8.615850e-47 |
| Msa0393900 | Msa1216600 | 0.822291 | 2.562398e-53 | -8.615850e-47 |
| Msa0393900 | Msa1219780 | 0.815222 | 1.032330e-51 | -8.615850e-47 |
| Msa0393900 | Msa1221170 | 0.822671 | 2.091465e-53 | -8.615850e-47 |
| Msa0393900 | Msa1222030 | 0.807350 | 5.275546e-50 | -8.615850e-47 |
| Msa0393900 | Msa1233650 | 0.827165 | 1.818432e-54 | -8.615850e-47 |
| Msa0393900 | Msa1265500 | 0.821829 | 3.279050e-53 | -8.615850e-47 |
| Msa0393900 | Msa1266710 | 0.805485 | 1.304667e-49 | -8.615850e-47 |
| Msa0393900 | Msa1296870 | 0.832503 | 9.107057e-56 | -8.615850e-47 |
| Msa0393900 | Msa1299310 | 0.828737 | 7.611825e-55 | -8.615850e-47 |
| Msa0393900 | Msa1300610 | 0.809257 | 2.068980e-50 | -8.615850e-47 |
| Msa0393900 | Msa1314710 | 0.828309 | 9.660188e-55 | -8.615850e-47 |
| Msa0393900 | Msa1323030 | 0.807266 | 5.496613e-50 | -8.615850e-47 |
| Msa0393900 | Msa1323120 | 0.809735 | 1.633548e-50 | -8.615850e-47 |
| Msa0393900 | Msa1323160 | 0.856305 | 3.520296e-62 | -8.615850e-47 |
| Msa0393900 | Msa1329770 | 0.815871 | 7.404868e-52 | -8.615850e-47 |
| Msa0393900 | Msa1355330 | 0.831080 | 2.043986e-55 | -8.615850e-47 |
| Msa0393900 | Msa1357490 | 0.807107 | 5.941586e-50 | -8.615850e-47 |
| Msa0393900 | Msa1370930 | 0.802328 | 5.911791e-49 | -8.615850e-47 |
| Msa0393900 | Msa1380490 | 0.809291 | 2.034421e-50 | -8.615850e-47 |
| Msa0393900 | Msa1382180 | 0.836110 | 1.133549e-56 | -8.615850e-47 |
| Msa0393900 | Msa1395690 | 0.842137 | 3.107693e-58 | -8.615850e-47 |
| Msa0393900 | Msa1406230 | -0.807664 | 4.526900e-50 | -8.615850e-47 |
| Msa0393900 | Msa1407210 | 0.810993 | 8.742640e-51 | -8.615850e-47 |
| Msa0393900 | Msa1411550 | 0.811402 | 7.128606e-51 | -8.615850e-47 |
| Msa0393900 | Msa1418190 | 0.824236 | 9.004706e-54 | -8.615850e-47 |
| Msa0393900 | Msa1423550 | -0.802302 | 5.985001e-49 | -8.615850e-47 |
| Msa0393900 | Msa1426420 | 0.817729 | 2.835007e-52 | -8.615850e-47 |
| Msa0393900 | Msa1459610 | 0.806447 | 8.191854e-50 | -8.615850e-47 |
| Msa0393900 | Msa1459970 | 0.816175 | 6.332687e-52 | -8.615850e-47 |
| Msa0242390 | Msa0393900 | 0.808052 | 3.743065e-50 | -8.615850e-47 |
| Msa0243990 | Msa0393900 | 0.805095 | 1.574854e-49 | -8.615850e-47 |
| Msa0263620 | Msa0393900 | -0.808698 | 2.725144e-50 | -8.615850e-47 |
| Msa0266640 | Msa0393900 | 0.850499 | 1.632553e-60 | -8.615850e-47 |
| Msa0266650 | Msa0393900 | 0.861596 | 9.182394e-64 | -8.615850e-47 |
| Msa0274260 | Msa0393900 | 0.822887 | 1.862795e-53 | -8.615850e-47 |
| Msa0277280 | Msa0393900 | 0.814776 | 1.296631e-51 | -8.615850e-47 |
| Msa0278950 | Msa0393900 | 0.811709 | 6.114125e-51 | -8.615850e-47 |
| Msa0297650 | Msa0393900 | 0.835824 | 1.340284e-56 | -8.615850e-47 |
| Msa0298270 | Msa0393900 | 0.824461 | 7.972086e-54 | -8.615850e-47 |
| Msa0315300 | Msa0393900 | 0.836154 | 1.104732e-56 | -8.615850e-47 |
| Msa0318370 | Msa0393900 | 0.816873 | 4.416838e-52 | -8.615850e-47 |
| Msa0343720 | Msa0393900 | 0.813520 | 2.455832e-51 | -8.615850e-47 |
| Msa0356200 | Msa0393900 | 0.846689 | 1.854993e-59 | -8.615850e-47 |
| Msa0356250 | Msa0393900 | 0.844401 | 7.733223e-59 | -8.615850e-47 |
| Msa0356380 | Msa0393900 | 0.829371 | 5.343808e-55 | -8.615850e-47 |
| Msa0356410 | Msa0393900 | 0.838137 | 3.438817e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0393900 | MtrunA17_Chr3g0079441 | 94.191 | 241 | 13 | 1 | 1 | 241 | 1 | 240 | 3.54e-167 | 470 |
| Msa0393900 | MtrunA17_Chr3g0079431 | 88.382 | 241 | 25 | 1 | 1 | 241 | 1 | 238 | 1.06e-156 | 444 |
| Msa0393900 | MtrunA17_Chr3g0079451 | 86.636 | 217 | 28 | 1 | 26 | 241 | 6 | 222 | 4.81e-137 | 394 |
| Msa0393900 | MtrunA17_Chr3g0079461 | 75.709 | 247 | 53 | 4 | 1 | 241 | 1 | 246 | 1.26e-122 | 357 |
| Msa0393900 | MtrunA17_Chr8g0382641 | 60.241 | 249 | 86 | 4 | 6 | 241 | 6 | 254 | 8.82e-103 | 307 |
| Msa0393900 | MtrunA17_Chr5g0425361 | 55.020 | 249 | 100 | 5 | 1 | 241 | 6 | 250 | 1.42e-90 | 276 |
| Msa0393900 | MtrunA17_Chr5g0425401 | 54.812 | 239 | 99 | 4 | 8 | 241 | 14 | 248 | 1.79e-89 | 273 |
| Msa0393900 | MtrunA17_Chr3g0123661 | 48.163 | 245 | 110 | 7 | 9 | 241 | 9 | 248 | 2.24e-71 | 227 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 107 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACATGATCACATAAGTATT+TGG | 0.123305 | 3_2:+8168625 | None:intergenic |
| CTATTATTTGAGCTTCTTAT+TGG | 0.156319 | 3_2:-8172718 | Msa0393900:CDS |
| ACATATCTTTGCGCTGAAAA+TGG | 0.170576 | 3_2:-8171016 | Msa0393900:CDS |
| GCTTACAAAGCTGTGAATTT+AGG | 0.195268 | 3_2:-8172660 | Msa0393900:CDS |
| TGCATTACTACAATATGTTT+TGG | 0.227561 | 3_2:-8168531 | Msa0393900:three_prime_UTR |
| CTTCTGGTTGGGAAACATTC+AGG | 0.235880 | 3_2:-8170958 | Msa0393900:CDS |
| TTATAATCTGAAATGTTTCT+TGG | 0.244588 | 3_2:+8170708 | None:intergenic |
| TTCAGATTCATGTCACAAAA+TGG | 0.258732 | 3_2:-8169939 | Msa0393900:CDS |
| AAGAAACATTTCAGATTATA+AGG | 0.276821 | 3_2:-8170706 | Msa0393900:CDS |
| TCATAGAGTTCTTAGCAAAA+AGG | 0.293278 | 3_2:-8169173 | Msa0393900:intron |
| CTCAAGTGGTTGATCGAAAA+TGG | 0.301104 | 3_2:-8167812 | Msa0393900:three_prime_UTR |
| CAGATTATGAGGGCACAAAT+TGG | 0.303729 | 3_2:-8170188 | Msa0393900:CDS |
| GCAGTTGAAGGTTCTCAAAA+TGG | 0.307654 | 3_2:-8169267 | Msa0393900:three_prime_UTR |
| TTTGTGCTTGGACATATCTT+TGG | 0.315120 | 3_2:+8167906 | None:intergenic |
| TGTAAGGGGTTCTTCTTTCC+CGG | 0.316476 | 3_2:-8167772 | Msa0393900:three_prime_UTR |
| ACATGATCACATAAGTATTT+GGG | 0.338303 | 3_2:+8168626 | None:intergenic |
| CATATCTTTGCGCTGAAAAT+GGG | 0.349908 | 3_2:-8171015 | Msa0393900:CDS |
| GTATATTCTCGTGCAACATT+TGG | 0.351147 | 3_2:-8167878 | Msa0393900:three_prime_UTR |
| AAGCTGTGAATTTAGGAAAC+TGG | 0.354101 | 3_2:-8172653 | Msa0393900:CDS |
| GTTGAACACCCTAAAATTGA+AGG | 0.385361 | 3_2:+8170802 | None:intergenic |
| GCCGACCGTAGTTCACCTTC+TGG | 0.397256 | 3_2:-8170974 | Msa0393900:CDS |
| TACATAAAGCTCTAGATGTA+AGG | 0.404002 | 3_2:-8167788 | Msa0393900:three_prime_UTR |
| ATCAGTGACTGCAGATTATG+AGG | 0.405023 | 3_2:-8170199 | Msa0393900:CDS |
| CTATCTTGATTGACACTTAG+TGG | 0.410417 | 3_2:+8168697 | None:intergenic |
| TGGCTCATTTGCAGCTTTGG+AGG | 0.420703 | 3_2:-8170838 | Msa0393900:intron |
| CCGTAGTTCACCTTCTGGTT+GGG | 0.427471 | 3_2:-8170969 | Msa0393900:CDS |
| TACCAACTTACTAATGGTTA+TGG | 0.431118 | 3_2:-8170108 | Msa0393900:CDS |
| TACTGTTCTATTTAGGGGAA+TGG | 0.435757 | 3_2:-8167970 | Msa0393900:intron |
| ATGGAACCTTCTCGCTTTGA+CGG | 0.442568 | 3_2:-8172612 | Msa0393900:CDS |
| CTTCTTCTCTCATTTGTCAA+AGG | 0.444788 | 3_2:-8168577 | Msa0393900:three_prime_UTR |
| CGCCATAACCATTAGTAAGT+TGG | 0.454539 | 3_2:+8170106 | None:intergenic |
| ACCGTAGTTCACCTTCTGGT+TGG | 0.463053 | 3_2:-8170970 | Msa0393900:CDS |
| TTTCAGCGCAAAGATATGTC+TGG | 0.466042 | 3_2:+8171020 | None:intergenic |
| GGCTCATTTGCAGCTTTGGA+GGG | 0.466108 | 3_2:-8170837 | Msa0393900:intron |
| TGAAATGTTTCTTGGTTGCT+AGG | 0.468956 | 3_2:+8170716 | None:intergenic |
| GTGGACTTGCATGCAGTTGA+AGG | 0.475672 | 3_2:-8169279 | Msa0393900:three_prime_UTR |
| TTCTGGTTGGGAAACATTCA+GGG | 0.477116 | 3_2:-8170957 | Msa0393900:intron |
| AGATTATGAGGGCACAAATT+GGG | 0.477446 | 3_2:-8170187 | Msa0393900:CDS |
| TTTGTGGGGTTAAATAATAT+AGG | 0.482260 | 3_2:-8170773 | Msa0393900:CDS |
| GATAGAGCCGGGGATCTTAG+TGG | 0.482843 | 3_2:-8168457 | Msa0393900:three_prime_UTR |
| TGAGCTATTCACCATCCAAC+AGG | 0.487874 | 3_2:+8169897 | None:intergenic |
| GGAGAATACCAACTTACTAA+TGG | 0.490578 | 3_2:-8170114 | Msa0393900:CDS |
| TGAGACTACAATGGTTGGGC+CGG | 0.490581 | 3_2:+8167753 | None:intergenic |
| ATTCGAATCAAAGCATCAAA+TGG | 0.491455 | 3_2:-8170662 | Msa0393900:CDS |
| AAGATATGTCCAAGCACAAA+TGG | 0.494100 | 3_2:-8167903 | Msa0393900:three_prime_UTR |
| TTCTCGTGCAACATTTGGAT+GGG | 0.495505 | 3_2:-8167873 | Msa0393900:three_prime_UTR |
| AATTGTCAACAAAGATCTCT+TGG | 0.496005 | 3_2:-8172589 | Msa0393900:intron |
| TAGGGGAATGGACGGCTGAA+TGG | 0.496560 | 3_2:-8167958 | Msa0393900:three_prime_UTR |
| CAAGAGATGGATATACAGAA+TGG | 0.497454 | 3_2:-8169227 | Msa0393900:three_prime_UTR |
| AATATACATCCATTTGTGCT+TGG | 0.498617 | 3_2:+8167894 | None:intergenic |
| GTTGCTAGGTGAATCTGAAA+AGG | 0.499593 | 3_2:+8170730 | None:intergenic |
| AAGAGATGGATATACAGAAT+GGG | 0.502002 | 3_2:-8169226 | Msa0393900:three_prime_UTR |
| CACTTGACAATGCTTTCACA+TGG | 0.508127 | 3_2:-8169830 | Msa0393900:three_prime_UTR |
| GAGACTACAATGGTTGGGCC+GGG | 0.511007 | 3_2:+8167754 | None:intergenic |
| TTTGTAACTTGCAGTAGGCA+TGG | 0.514566 | 3_2:-8169315 | Msa0393900:intron |
| TATTTGAGACTACAATGGTT+GGG | 0.515019 | 3_2:+8167749 | None:intergenic |
| TACATAAGAAATGATAGAGC+CGG | 0.520749 | 3_2:-8168469 | Msa0393900:three_prime_UTR |
| ATTCTCGTGCAACATTTGGA+TGG | 0.521002 | 3_2:-8167874 | Msa0393900:three_prime_UTR |
| TTGTAACTTGCAGTAGGCAT+GGG | 0.521331 | 3_2:-8169314 | Msa0393900:intron |
| ACATAAGAAATGATAGAGCC+GGG | 0.521389 | 3_2:-8168468 | Msa0393900:three_prime_UTR |
| ACTGGCTTGTTGCTGAAGGA+TGG | 0.521485 | 3_2:-8172635 | Msa0393900:CDS |
| TGTGATCATGTCAAATCCAT+TGG | 0.526301 | 3_2:-8168614 | Msa0393900:three_prime_UTR |
| GAGCATAGTGGAACAAGAGA+TGG | 0.530600 | 3_2:-8169240 | Msa0393900:three_prime_UTR |
| CTGCCTTGTAATAGTTCTTG+AGG | 0.537261 | 3_2:+8168674 | None:intergenic |
| ACATAAAGCTCTAGATGTAA+GGG | 0.545663 | 3_2:-8167787 | Msa0393900:three_prime_UTR |
| GCTTGTTGCTGAAGGATGGA+TGG | 0.547369 | 3_2:-8172631 | Msa0393900:CDS |
| GAGGCTATAAATAGTGCCCT+TGG | 0.548068 | 3_2:-8172786 | Msa0393900:five_prime_UTR |
| TTTCTTACCCTCATGACTTG+AGG | 0.552403 | 3_2:+8170075 | None:intergenic |
| TCCTGAGTTGGCTATCACCA+AGG | 0.553043 | 3_2:+8172769 | None:intergenic |
| ATATCTTTGCGCTGAAAATG+GGG | 0.554384 | 3_2:-8171014 | Msa0393900:CDS |
| ACGGCTGAATGGAGCATACA+AGG | 0.556489 | 3_2:-8167947 | Msa0393900:three_prime_UTR |
| CAGTTATGTATGAATTCCAA+TGG | 0.561323 | 3_2:+8169970 | None:intergenic |
| ACAAATGTCAGAATAACCAT+TGG | 0.569248 | 3_2:-8167838 | Msa0393900:three_prime_UTR |
| GGAAACTGGCTTGTTGCTGA+AGG | 0.571457 | 3_2:-8172639 | Msa0393900:CDS |
| GTGGGGTTAAATAATATAGG+AGG | 0.575488 | 3_2:-8170770 | Msa0393900:CDS |
| CCCCAACAAAAGGCTTAGGT+GGG | 0.579618 | 3_2:+8169865 | None:intergenic |
| GTTCTATTTAGGGGAATGGA+CGG | 0.581821 | 3_2:-8167966 | Msa0393900:intron |
| GGGTTAAATAATATAGGAGG+AGG | 0.582810 | 3_2:-8170767 | Msa0393900:CDS |
| ACTATTGTAAACACATTACA+AGG | 0.585005 | 3_2:-8170135 | Msa0393900:CDS |
| GCATGGGATGAAAGTGATTG+TGG | 0.591242 | 3_2:-8169298 | Msa0393900:three_prime_UTR |
| AGAGAAACCACTAAGATCCC+CGG | 0.594540 | 3_2:+8168450 | None:intergenic |
| ACCAGAAGGTGAACTACGGT+CGG | 0.604107 | 3_2:+8170973 | None:intergenic |
| ACAATTCCGTCAAAGCGAGA+AGG | 0.606902 | 3_2:+8172606 | None:intergenic |
| TATTGTAGTAATGCACATCA+AGG | 0.609097 | 3_2:+8168539 | None:intergenic |
| ATAGAGCTCCTCAAGTCATG+AGG | 0.611152 | 3_2:-8170083 | Msa0393900:CDS |
| GTATTTGAGACTACAATGGT+TGG | 0.614001 | 3_2:+8167748 | None:intergenic |
| CTGAATGTTTCCCAACCAGA+AGG | 0.618940 | 3_2:+8170959 | None:intergenic |
| AAGTGTATTTGAGACTACAA+TGG | 0.620612 | 3_2:+8167744 | None:intergenic |
| TAGCCTCAAGAACTATTACA+AGG | 0.620823 | 3_2:-8168677 | Msa0393900:three_prime_UTR |
| CCCAACCAGAAGGTGAACTA+CGG | 0.625802 | 3_2:+8170969 | None:intergenic |
| CCTGAGTTGGCTATCACCAA+GGG | 0.625898 | 3_2:+8172770 | None:intergenic |
| CCCTTGGTGATAGCCAACTC+AGG | 0.626585 | 3_2:-8172770 | Msa0393900:five_prime_UTR |
| CATAAAGCTCTAGATGTAAG+GGG | 0.636979 | 3_2:-8167786 | Msa0393900:three_prime_UTR |
| ATAACCATTGGAGTCTCAAG+TGG | 0.641339 | 3_2:-8167826 | Msa0393900:three_prime_UTR |
| CAGTGAGGATACCTGTTGGA+TGG | 0.646084 | 3_2:-8169908 | Msa0393900:CDS |
| TCAGTGACTGCAGATTATGA+GGG | 0.647319 | 3_2:-8170198 | Msa0393900:CDS |
| AGAGATGGATATACAGAATG+GGG | 0.649350 | 3_2:-8169225 | Msa0393900:three_prime_UTR |
| TAAGCAAACGAAAGAGCGTG+AGG | 0.662674 | 3_2:+8172678 | None:intergenic |
| AGGCAGCTTATGATGTTGTG+AGG | 0.665952 | 3_2:-8168657 | Msa0393900:three_prime_UTR |
| TAGAGCTCCTCAAGTCATGA+GGG | 0.665978 | 3_2:-8170082 | Msa0393900:intron |
| TATCTTTGCGCTGAAAATGG+GGG | 0.665981 | 3_2:-8171013 | Msa0393900:CDS |
| TCAACCACTTGAGACTCCAA+TGG | 0.670774 | 3_2:+8167822 | None:intergenic |
| GATGCAGTGAGGATACCTGT+TGG | 0.680380 | 3_2:-8169912 | Msa0393900:CDS |
| TCTATGACAGAGACTGTCTG+TGG | 0.680638 | 3_2:+8169189 | None:intergenic |
| ACTTGACAATGCTTTCACAT+GGG | 0.683824 | 3_2:-8169829 | Msa0393900:three_prime_UTR |
| CATAAGAAATGATAGAGCCG+GGG | 0.686971 | 3_2:-8168467 | Msa0393900:three_prime_UTR |
| AAAATGGATTAGATGCAGTG+AGG | 0.737558 | 3_2:-8169923 | Msa0393900:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATAAATTAATAT+GGG | + | chr3_2:8167990-8168009 | None:intergenic | 0.0% |
| !! | TATATATATATAAATTAATA+TGG | + | chr3_2:8167991-8168010 | None:intergenic | 0.0% |
| !! | TTTGTTAAATATTATAAAGA+CGG | + | chr3_2:8168324-8168343 | None:intergenic | 10.0% |
| !!! | ATTACATGATTTTATTAAAA+TGG | + | chr3_2:8169960-8169979 | None:intergenic | 10.0% |
| !!! | TTAGAAGTTTTAAATAAAAT+TGG | - | chr3_2:8171011-8171030 | Msa0393900:CDS | 10.0% |
| !!! | TAGAAGTTTTAAATAAAATT+GGG | - | chr3_2:8171012-8171031 | Msa0393900:CDS | 10.0% |
| !! | ATAAATTATAGTAACATTAA+TGG | - | chr3_2:8171051-8171070 | Msa0393900:CDS | 10.0% |
| !! | AATCATAAATTTATAAAGAA+AGG | + | chr3_2:8171638-8171657 | None:intergenic | 10.0% |
| !!! | ATATAATATAATAGTTTTGG+TGG | + | chr3_2:8168143-8168162 | None:intergenic | 15.0% |
| !!! | TTTTTTTGTCAATAGTTTAA+TGG | + | chr3_2:8168614-8168633 | None:intergenic | 15.0% |
| !!! | CATTTTGAAACAAAATTTTT+TGG | + | chr3_2:8168918-8168937 | None:intergenic | 15.0% |
| !!! | TGTTTTAATTTAGATTGTAA+AGG | - | chr3_2:8169156-8169175 | Msa0393900:intron | 15.0% |
| !!! | CTTTCTTTTAAAAGTTTATA+AGG | + | chr3_2:8169247-8169266 | None:intergenic | 15.0% |
| !! | AATAGACTATAAAAAATATG+GGG | + | chr3_2:8169286-8169305 | None:intergenic | 15.0% |
| !! | CAATAGACTATAAAAAATAT+GGG | + | chr3_2:8169287-8169306 | None:intergenic | 15.0% |
| !!! | AAAAGTTAAGTTCTAATTAT+TGG | - | chr3_2:8169688-8169707 | Msa0393900:intron | 15.0% |
| !! | GATTTAAATTCAAAGTTATA+AGG | - | chr3_2:8171101-8171120 | Msa0393900:intron | 15.0% |
| !! | ATATATACTTCAAAGTTATA+AGG | - | chr3_2:8171160-8171179 | Msa0393900:intron | 15.0% |
| !!! | AAAATTTTAAAATGACATGA+CGG | - | chr3_2:8171486-8171505 | Msa0393900:intron | 15.0% |
| !! | TATAGTAATAGAAAAAGTTT+AGG | - | chr3_2:8171804-8171823 | Msa0393900:intron | 15.0% |
| !! | CAGGATCATTTAAAAAAAAA+TGG | - | chr3_2:8167795-8167814 | Msa0393900:three_prime_UTR | 20.0% |
| !! | AAAAAAATCATATATACCGA+AGG | + | chr3_2:8168175-8168194 | None:intergenic | 20.0% |
| !! | AAATATATACGTACTAGAAA+AGG | - | chr3_2:8168353-8168372 | Msa0393900:intron | 20.0% |
| !!! | AGTACTTTAACATTTTTTTG+TGG | + | chr3_2:8168455-8168474 | None:intergenic | 20.0% |
| !!! | AAAAAATGTTAAAGTACTCA+AGG | - | chr3_2:8168457-8168476 | Msa0393900:three_prime_UTR | 20.0% |
| !!! | AAAAATGTTAAAGTACTCAA+GGG | - | chr3_2:8168458-8168477 | Msa0393900:three_prime_UTR | 20.0% |
| !!! | GTTTAATTTTAAGCCAAATA+TGG | - | chr3_2:8168702-8168721 | Msa0393900:three_prime_UTR | 20.0% |
| !! | TTTGTAATGCTTGATAAAAT+TGG | - | chr3_2:8168806-8168825 | Msa0393900:intron | 20.0% |
| !! | GAACAAAATTAAAGTTGTAT+TGG | + | chr3_2:8168958-8168977 | None:intergenic | 20.0% |
| !!! | TTTAAGTTTGTCTTTTTCTT+GGG | - | chr3_2:8169030-8169049 | Msa0393900:intron | 20.0% |
| !! | ATAGACTATAAAAAATATGG+GGG | + | chr3_2:8169285-8169304 | None:intergenic | 20.0% |
| !! | CCAATAGACTATAAAAAATA+TGG | + | chr3_2:8169288-8169307 | None:intergenic | 20.0% |
| !!! | CCATATTTTTTATAGTCTAT+TGG | - | chr3_2:8169285-8169304 | Msa0393900:three_prime_UTR | 20.0% |
| !!! | TACATTGTTTGATTTAAAAC+CGG | + | chr3_2:8169384-8169403 | None:intergenic | 20.0% |
| !!! | TTTTGATCTTTGATGATTTT+AGG | - | chr3_2:8169469-8169488 | Msa0393900:intron | 20.0% |
| !!! | TTATAATCTGAAATGTTTCT+TGG | + | chr3_2:8169841-8169860 | None:intergenic | 20.0% |
| !! | AAGAAACATTTCAGATTATA+AGG | - | chr3_2:8169840-8169859 | Msa0393900:three_prime_UTR | 20.0% |
| !! | GTAACTTGATTTAAAAGAAT+TGG | + | chr3_2:8170021-8170040 | None:intergenic | 20.0% |
| !! | AAATTGAATGTTGAACTAAA+GGG | + | chr3_2:8170802-8170821 | None:intergenic | 20.0% |
| !! | TAAATTGAATGTTGAACTAA+AGG | + | chr3_2:8170803-8170822 | None:intergenic | 20.0% |
| !!! | TTTAAATAAAATTGGGTTAG+AGG | - | chr3_2:8171019-8171038 | Msa0393900:CDS | 20.0% |
| !!! | TTAAATAAAATTGGGTTAGA+GGG | - | chr3_2:8171020-8171039 | Msa0393900:CDS | 20.0% |
| !!! | TTTTTGTGAACTAAGTTTTA+AGG | + | chr3_2:8171728-8171747 | None:intergenic | 20.0% |
| !!! | ACAATTTTACTGTTCTATTT+AGG | - | chr3_2:8172569-8172588 | Msa0393900:intron | 20.0% |
| !!! | CAATTTTACTGTTCTATTTA+GGG | - | chr3_2:8172570-8172589 | Msa0393900:intron | 20.0% |
| !!! | AATTTTACTGTTCTATTTAG+GGG | - | chr3_2:8172571-8172590 | Msa0393900:intron | 20.0% |
| !!! | ATATTTTAAAGCTTCATCAG+AGG | - | chr3_2:8167741-8167760 | Msa0393900:three_prime_UTR | 25.0% |
| !!! | TTTTTTAAATGATCCTGAGT+TGG | + | chr3_2:8167792-8167811 | None:intergenic | 25.0% |
| ! | CTATTATTTGAGCTTCTTAT+TGG | - | chr3_2:8167828-8167847 | Msa0393900:three_prime_UTR | 25.0% |
| ! | ATTATATTATGAGTCTCCTT+CGG | - | chr3_2:8168156-8168175 | Msa0393900:intron | 25.0% |
| !! | TAGGAATGTTTTCATTTCAA+TGG | + | chr3_2:8168276-8168295 | None:intergenic | 25.0% |
| ! | ATAATATATGCAAGACCTTA+GGG | - | chr3_2:8168414-8168433 | Msa0393900:intron | 25.0% |
| !!! | ACTTTAACATTTTTTTGTGG+TGG | + | chr3_2:8168452-8168471 | None:intergenic | 25.0% |
| ! | TAGACAATGATGAATAAACA+AGG | + | chr3_2:8168682-8168701 | None:intergenic | 25.0% |
| !!! | CTTTAAGTTTGTCTTTTTCT+TGG | - | chr3_2:8169029-8169048 | Msa0393900:intron | 25.0% |
| !!! | GTTTTTTAGCAAATCAAATG+CGG | - | chr3_2:8169437-8169456 | Msa0393900:intron | 25.0% |
| ! | GGTAAGTAATGTATATATCT+AGG | - | chr3_2:8169610-8169629 | Msa0393900:intron | 25.0% |
| ! | GTGTTCAACAAAAAATTTGT+GGG | - | chr3_2:8169758-8169777 | Msa0393900:intron | 25.0% |
| ! | TGTTCAACAAAAAATTTGTG+GGG | - | chr3_2:8169759-8169778 | Msa0393900:intron | 25.0% |
| ! | TTTGTGGGGTTAAATAATAT+AGG | - | chr3_2:8169773-8169792 | Msa0393900:intron | 25.0% |
| !! | AGACTTTGAAAAAATGACAT+TGG | - | chr3_2:8170057-8170076 | Msa0393900:intron | 25.0% |
| !! | CGTTTCTAACATTTTTCTTA+CGG | - | chr3_2:8170213-8170232 | Msa0393900:CDS | 25.0% |
| ! | ACTATTGTAAACACATTACA+AGG | - | chr3_2:8170411-8170430 | Msa0393900:intron | 25.0% |
| ! | AATAATGAACTTGCAAGATT+TGG | - | chr3_2:8170515-8170534 | Msa0393900:intron | 25.0% |
| ! | ATGTTACCATTAATGTTTAG+TGG | + | chr3_2:8171138-8171157 | None:intergenic | 25.0% |
| !!! | GTAATCACATTTTTGTTTAG+TGG | + | chr3_2:8171197-8171216 | None:intergenic | 25.0% |
| !! | ATATATTTGTAACTTGCAGT+AGG | - | chr3_2:8171226-8171245 | Msa0393900:intron | 25.0% |
| ! | AAGAAAGGTAAATGTTGATA+CGG | + | chr3_2:8171623-8171642 | None:intergenic | 25.0% |
| !! | CCATTACTGTGATAATTTTT+GGG | + | chr3_2:8171663-8171682 | None:intergenic | 25.0% |
| !! | ACCATTACTGTGATAATTTT+TGG | + | chr3_2:8171664-8171683 | None:intergenic | 25.0% |
| ! | AGATATGTAAAGTAATAGAG+AGG | + | chr3_2:8171702-8171721 | None:intergenic | 25.0% |
| ! | TAAAGAAATCAGTTTCGAAT+AGG | + | chr3_2:8171759-8171778 | None:intergenic | 25.0% |
| ! | AGTAATAGAAAAAGTTTAGG+AGG | - | chr3_2:8171807-8171826 | Msa0393900:intron | 25.0% |
| ! | ACATGATCACATAAGTATTT+GGG | + | chr3_2:8171923-8171942 | None:intergenic | 25.0% |
| !! | TGCATTACTACAATATGTTT+TGG | - | chr3_2:8172015-8172034 | Msa0393900:intron | 25.0% |
| !! | GCATTACTACAATATGTTTT+GGG | - | chr3_2:8172016-8172035 | Msa0393900:intron | 25.0% |
| ! | GAATACAATCAGTCTATTTA+CGG | + | chr3_2:8172416-8172435 | None:intergenic | 25.0% |
| AATTGTCAACAAAGATCTCT+TGG | - | chr3_2:8167957-8167976 | Msa0393900:three_prime_UTR | 30.0% | |
| AAACATGTTAAGAACTCAGT+TGG | - | chr3_2:8168379-8168398 | Msa0393900:intron | 30.0% | |
| CATAATATATGCAAGACCTT+AGG | - | chr3_2:8168413-8168432 | Msa0393900:intron | 30.0% | |
| GAGAATTTGTATGTTGAACA+GGG | + | chr3_2:8168507-8168526 | None:intergenic | 30.0% | |
| GCTCGTAGTAAAAAATCAAT+TGG | + | chr3_2:8168539-8168558 | None:intergenic | 30.0% | |
| !!! | ATTGATTTTTTACTACGAGC+TGG | - | chr3_2:8168539-8168558 | Msa0393900:three_prime_UTR | 30.0% |
| CAATGATGAATAAACAAGGA+AGG | + | chr3_2:8168678-8168697 | None:intergenic | 30.0% | |
| ACTTGGTCTATTTCCATATT+TGG | + | chr3_2:8168718-8168737 | None:intergenic | 30.0% | |
| AAATATGGAAATAGACCAAG+TGG | - | chr3_2:8168717-8168736 | Msa0393900:three_prime_UTR | 30.0% | |
| GTAATGCTTGATAAAATTGG+TGG | - | chr3_2:8168809-8168828 | Msa0393900:intron | 30.0% | |
| AAGTGACACTCATTATGAAA+CGG | + | chr3_2:8168892-8168911 | None:intergenic | 30.0% | |
| ! | GTTGGAGTATTTATTGAGTT+GGG | + | chr3_2:8168982-8169001 | None:intergenic | 30.0% |
| ! | AGTTGGAGTATTTATTGAGT+TGG | + | chr3_2:8168983-8169002 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | - | chr3_2:8169122-8169141 | Msa0393900:intron | 30.0% |
| !! | GATCTTTGATGATTTTAGGA+TGG | - | chr3_2:8169473-8169492 | Msa0393900:intron | 30.0% |
| AATCTTGTCTTGATTACACT+TGG | - | chr3_2:8169642-8169661 | Msa0393900:intron | 30.0% | |
| ! | TGACTCATCCTTCAATTTTA+GGG | - | chr3_2:8169736-8169755 | Msa0393900:intron | 30.0% |
| GGTGTTCAACAAAAAATTTG+TGG | - | chr3_2:8169757-8169776 | Msa0393900:intron | 30.0% | |
| !! | TGCTTTGATTCGAATTTTGA+GGG | + | chr3_2:8169879-8169898 | None:intergenic | 30.0% |
| !! | ATGCTTTGATTCGAATTTTG+AGG | + | chr3_2:8169880-8169899 | None:intergenic | 30.0% |
| ! | ATTCGAATCAAAGCATCAAA+TGG | - | chr3_2:8169884-8169903 | Msa0393900:three_prime_UTR | 30.0% |
| !!! | ATCAAATGGTCTATTTTTGC+AGG | - | chr3_2:8169898-8169917 | Msa0393900:exon | 30.0% |
| !! | TAAATTGATTAGCTTGAGGA+TGG | + | chr3_2:8169935-8169954 | None:intergenic | 30.0% |
| !! | GGTTTAAATTGATTAGCTTG+AGG | + | chr3_2:8169939-8169958 | None:intergenic | 30.0% |
| ! | AAGAATTGGTCTCTTAAGAT+TGG | + | chr3_2:8170007-8170026 | None:intergenic | 30.0% |
| GAAACGAATTCTACATAAAG+TGG | - | chr3_2:8170139-8170158 | Msa0393900:CDS | 30.0% | |
| ! | TCTAATACTCGCACTTTTAT+CGG | + | chr3_2:8170186-8170205 | None:intergenic | 30.0% |
| ATTGAACCTTCACACATATA+TGG | + | chr3_2:8170320-8170339 | None:intergenic | 30.0% | |
| ATAGTCATGTGAAAAACTGA+TGG | + | chr3_2:8170396-8170415 | None:intergenic | 30.0% | |
| TACCAACTTACTAATGGTTA+TGG | - | chr3_2:8170438-8170457 | Msa0393900:intron | 30.0% | |
| !!! | TTGAACTTTGTTTTCTTTGC+AGG | - | chr3_2:8170552-8170571 | Msa0393900:intron | 30.0% |
| CAGTTATGTATGAATTCCAA+TGG | + | chr3_2:8170579-8170598 | None:intergenic | 30.0% | |
| TTCAGATTCATGTCACAAAA+TGG | - | chr3_2:8170607-8170626 | Msa0393900:intron | 30.0% | |
| TTACTAAAATAGTCACCAAG+CGG | - | chr3_2:8171079-8171098 | Msa0393900:intron | 30.0% | |
| ACTTTGAATTTAAATCCGCT+TGG | + | chr3_2:8171097-8171116 | None:intergenic | 30.0% | |
| CTCTTACCACTAAACATTAA+TGG | - | chr3_2:8171129-8171148 | Msa0393900:intron | 30.0% | |
| AAGAGATGGATATACAGAAT+GGG | - | chr3_2:8171320-8171339 | Msa0393900:intron | 30.0% | |
| TCATAGAGTTCTTAGCAAAA+AGG | - | chr3_2:8171373-8171392 | Msa0393900:intron | 30.0% | |
| !!! | ATTTTAAAATGACATGACGG+AGG | - | chr3_2:8171489-8171508 | Msa0393900:intron | 30.0% |
| !!! | TTTTAAAATGACATGACGGA+GGG | - | chr3_2:8171490-8171509 | Msa0393900:intron | 30.0% |
| CCCAAAAATTATCACAGTAA+TGG | - | chr3_2:8171660-8171679 | Msa0393900:intron | 30.0% | |
| GACATGATCACATAAGTATT+TGG | + | chr3_2:8171924-8171943 | None:intergenic | 30.0% | |
| TATTGTAGTAATGCACATCA+AGG | + | chr3_2:8172010-8172029 | None:intergenic | 30.0% | |
| !!! | ATGTTTTGGGACAAATTCAA+TGG | - | chr3_2:8172029-8172048 | Msa0393900:intron | 30.0% |
| TACATAAGAAATGATAGAGC+CGG | - | chr3_2:8172077-8172096 | Msa0393900:intron | 30.0% | |
| !!! | TCAAATGCTCTTAGTTTTGT+AGG | - | chr3_2:8172122-8172141 | Msa0393900:intron | 30.0% |
| ACTAACATTAGCAAGGATTT+GGG | + | chr3_2:8172155-8172174 | None:intergenic | 30.0% | |
| AACTAACATTAGCAAGGATT+TGG | + | chr3_2:8172156-8172175 | None:intergenic | 30.0% | |
| AAATCCTTGCTAATGTTAGT+TGG | - | chr3_2:8172155-8172174 | Msa0393900:intron | 30.0% | |
| AATATACATCCATTTGTGCT+TGG | + | chr3_2:8172655-8172674 | None:intergenic | 30.0% | |
| ACAAATGTCAGAATAACCAT+TGG | - | chr3_2:8172708-8172727 | Msa0393900:CDS | 30.0% | |
| !! | TACATAAAGCTCTAGATGTA+AGG | - | chr3_2:8172758-8172777 | Msa0393900:five_prime_UTR | 30.0% |
| !! | ACATAAAGCTCTAGATGTAA+GGG | - | chr3_2:8172759-8172778 | Msa0393900:five_prime_UTR | 30.0% |
| ! | TATTTGAGACTACAATGGTT+GGG | + | chr3_2:8172800-8172819 | None:intergenic | 30.0% |
| ! | AAGTGTATTTGAGACTACAA+TGG | + | chr3_2:8172805-8172824 | None:intergenic | 30.0% |
| GCTTACAAAGCTGTGAATTT+AGG | - | chr3_2:8167886-8167905 | Msa0393900:three_prime_UTR | 35.0% | |
| AAGCTGTGAATTTAGGAAAC+TGG | - | chr3_2:8167893-8167912 | Msa0393900:three_prime_UTR | 35.0% | |
| ATGTTAAGAACTCAGTTGGT+AGG | - | chr3_2:8168383-8168402 | Msa0393900:intron | 35.0% | |
| ! | TGTTAAGAACTCAGTTGGTA+GGG | - | chr3_2:8168384-8168403 | Msa0393900:intron | 35.0% |
| ACTCAAGGGAAAATGATGAT+AGG | - | chr3_2:8168472-8168491 | Msa0393900:three_prime_UTR | 35.0% | |
| GGAGAATTTGTATGTTGAAC+AGG | + | chr3_2:8168508-8168527 | None:intergenic | 35.0% | |
| AGTAAAAAATCAATTGGCCG+TGG | + | chr3_2:8168533-8168552 | None:intergenic | 35.0% | |
| !! | ATGTGTTTTGTTGTGTGGAA+TGG | + | chr3_2:8168652-8168671 | None:intergenic | 35.0% |
| CCAAGTGGATGAACTTATAA+CGG | - | chr3_2:8168732-8168751 | Msa0393900:three_prime_UTR | 35.0% | |
| AAATTGTGCGAGAGAAAAGT+TGG | + | chr3_2:8169000-8169019 | None:intergenic | 35.0% | |
| !!! | ATATGTTTTGTTTAGCCCCA+TGG | - | chr3_2:8169358-8169377 | Msa0393900:intron | 35.0% |
| ! | TTTGATTTAAAACCGGCCAT+GGG | + | chr3_2:8169377-8169396 | None:intergenic | 35.0% |
| ACATATCTTTGCGCTGAAAA+TGG | - | chr3_2:8169530-8169549 | Msa0393900:intron | 35.0% | |
| CATATCTTTGCGCTGAAAAT+GGG | - | chr3_2:8169531-8169550 | Msa0393900:intron | 35.0% | |
| ATATCTTTGCGCTGAAAATG+GGG | - | chr3_2:8169532-8169551 | Msa0393900:intron | 35.0% | |
| ! | GTGACTCATCCTTCAATTTT+AGG | - | chr3_2:8169735-8169754 | Msa0393900:intron | 35.0% |
| GTTGAACACCCTAAAATTGA+AGG | + | chr3_2:8169747-8169766 | None:intergenic | 35.0% | |
| GTGGGGTTAAATAATATAGG+AGG | - | chr3_2:8169776-8169795 | Msa0393900:intron | 35.0% | |
| GGGTTAAATAATATAGGAGG+AGG | - | chr3_2:8169779-8169798 | Msa0393900:intron | 35.0% | |
| TGAAATGTTTCTTGGTTGCT+AGG | + | chr3_2:8169833-8169852 | None:intergenic | 35.0% | |
| !! | GCTTTGATTCGAATTTTGAG+GGG | + | chr3_2:8169878-8169897 | None:intergenic | 35.0% |
| TTATTCATTGTGACTCATGC+AGG | - | chr3_2:8170104-8170123 | Msa0393900:CDS | 35.0% | |
| TTATCGGATGAAACTCATGT+GGG | + | chr3_2:8170170-8170189 | None:intergenic | 35.0% | |
| TTTATCGGATGAAACTCATG+TGG | + | chr3_2:8170171-8170190 | None:intergenic | 35.0% | |
| ! | AGATTATGAGGGCACAAATT+GGG | - | chr3_2:8170359-8170378 | Msa0393900:intron | 35.0% |
| GGAGAATACCAACTTACTAA+TGG | - | chr3_2:8170432-8170451 | Msa0393900:intron | 35.0% | |
| !! | AAAATGGATTAGATGCAGTG+AGG | - | chr3_2:8170623-8170642 | Msa0393900:intron | 35.0% |
| ACTTGACAATGCTTTCACAT+GGG | - | chr3_2:8170717-8170736 | Msa0393900:CDS | 35.0% | |
| !!! | CAAAATGGTTTTGAGCATAG+TGG | - | chr3_2:8171294-8171313 | Msa0393900:intron | 35.0% |
| CAAGAGATGGATATACAGAA+TGG | - | chr3_2:8171319-8171338 | Msa0393900:intron | 35.0% | |
| AGAGATGGATATACAGAATG+GGG | - | chr3_2:8171321-8171340 | Msa0393900:intron | 35.0% | |
| ! | TCTCTATCTCTCTGTAGTTT+TGG | - | chr3_2:8171594-8171613 | Msa0393900:intron | 35.0% |
| CTATCTTGATTGACACTTAG+TGG | + | chr3_2:8171852-8171871 | None:intergenic | 35.0% | |
| TAGCCTCAAGAACTATTACA+AGG | - | chr3_2:8171869-8171888 | Msa0393900:intron | 35.0% | |
| TGTGATCATGTCAAATCCAT+TGG | - | chr3_2:8171932-8171951 | Msa0393900:intron | 35.0% | |
| !!! | GAGAAGAAGTTTTGAATCTG+TGG | + | chr3_2:8171958-8171977 | None:intergenic | 35.0% |
| CTTCTTCTCTCATTTGTCAA+AGG | - | chr3_2:8171969-8171988 | Msa0393900:intron | 35.0% | |
| ACATAAGAAATGATAGAGCC+GGG | - | chr3_2:8172078-8172097 | Msa0393900:intron | 35.0% | |
| TAGACCAACTAACATTAGCA+AGG | + | chr3_2:8172162-8172181 | None:intergenic | 35.0% | |
| AATACTTGATCCTTCACACT+TGG | + | chr3_2:8172375-8172394 | None:intergenic | 35.0% | |
| GTGTGAAGGATCAAGTATTT+AGG | - | chr3_2:8172376-8172395 | Msa0393900:intron | 35.0% | |
| TACTGTTCTATTTAGGGGAA+TGG | - | chr3_2:8172576-8172595 | Msa0393900:intron | 35.0% | |
| TTTGTGCTTGGACATATCTT+TGG | + | chr3_2:8172643-8172662 | None:intergenic | 35.0% | |
| AAGATATGTCCAAGCACAAA+TGG | - | chr3_2:8172643-8172662 | Msa0393900:CDS | 35.0% | |
| GTATATTCTCGTGCAACATT+TGG | - | chr3_2:8172668-8172687 | Msa0393900:CDS | 35.0% | |
| !! | CATAAAGCTCTAGATGTAAG+GGG | - | chr3_2:8172760-8172779 | Msa0393900:five_prime_UTR | 35.0% |
| ! | GTATTTGAGACTACAATGGT+TGG | + | chr3_2:8172801-8172820 | None:intergenic | 35.0% |
| !!! | ACATTTTTTTGTGGTGGCAG+AGG | + | chr3_2:8168446-8168465 | None:intergenic | 40.0% |
| CAAGGGAAAATGATGATAGG+TGG | - | chr3_2:8168475-8168494 | Msa0393900:three_prime_UTR | 40.0% | |
| ACATACAAATTCTCCCACCA+CGG | - | chr3_2:8168513-8168532 | Msa0393900:three_prime_UTR | 40.0% | |
| AAAAATCAATTGGCCGTGGT+GGG | + | chr3_2:8168529-8168548 | None:intergenic | 40.0% | |
| AAAAAATCAATTGGCCGTGG+TGG | + | chr3_2:8168530-8168549 | None:intergenic | 40.0% | |
| GTTGTGTGGAATGGAACATT+GGG | + | chr3_2:8168643-8168662 | None:intergenic | 40.0% | |
| TGTTGTGTGGAATGGAACAT+TGG | + | chr3_2:8168644-8168663 | None:intergenic | 40.0% | |
| !! | GGTGTATGTGTTTTGTTGTG+TGG | + | chr3_2:8168657-8168676 | None:intergenic | 40.0% |
| CCGTTATAAGTTCATCCACT+TGG | + | chr3_2:8168735-8168754 | None:intergenic | 40.0% | |
| GACACTCATTATGAAACGGA+GGG | + | chr3_2:8168888-8168907 | None:intergenic | 40.0% | |
| TGACACTCATTATGAAACGG+AGG | + | chr3_2:8168889-8168908 | None:intergenic | 40.0% | |
| TTGGACAAAAAGTTTGCCCA+TGG | - | chr3_2:8169304-8169323 | Msa0393900:three_prime_UTR | 40.0% | |
| TGGACAAAAAGTTTGCCCAT+GGG | - | chr3_2:8169305-8169324 | Msa0393900:intron | 40.0% | |
| TTGTCTCTCACTAAACCCAT+GGG | + | chr3_2:8169323-8169342 | None:intergenic | 40.0% | |
| TTTGTCTCTCACTAAACCCA+TGG | + | chr3_2:8169324-8169343 | None:intergenic | 40.0% | |
| ! | TTGATTTAAAACCGGCCATG+GGG | + | chr3_2:8169376-8169395 | None:intergenic | 40.0% |
| ! | GTTTGATTTAAAACCGGCCA+TGG | + | chr3_2:8169378-8169397 | None:intergenic | 40.0% |
| TTTCAGCGCAAAGATATGTC+TGG | + | chr3_2:8169529-8169548 | None:intergenic | 40.0% | |
| TATCTTTGCGCTGAAAATGG+GGG | - | chr3_2:8169533-8169552 | Msa0393900:intron | 40.0% | |
| ! | TTCTGGTTGGGAAACATTCA+GGG | - | chr3_2:8169589-8169608 | Msa0393900:intron | 40.0% |
| !! | TATTGGCTCATTTGCAGCTT+TGG | - | chr3_2:8169705-8169724 | Msa0393900:intron | 40.0% |
| GTTGCTAGGTGAATCTGAAA+AGG | + | chr3_2:8169819-8169838 | None:intergenic | 40.0% | |
| CCTTCACACATATATGGTCA+AGG | + | chr3_2:8170314-8170333 | None:intergenic | 40.0% | |
| CCTTGACCATATATGTGTGA+AGG | - | chr3_2:8170311-8170330 | Msa0393900:intron | 40.0% | |
| ATCAGTGACTGCAGATTATG+AGG | - | chr3_2:8170347-8170366 | Msa0393900:intron | 40.0% | |
| TCAGTGACTGCAGATTATGA+GGG | - | chr3_2:8170348-8170367 | Msa0393900:intron | 40.0% | |
| ! | CAGATTATGAGGGCACAAAT+TGG | - | chr3_2:8170358-8170377 | Msa0393900:intron | 40.0% |
| CGCCATAACCATTAGTAAGT+TGG | + | chr3_2:8170443-8170462 | None:intergenic | 40.0% | |
| TTTCTTACCCTCATGACTTG+AGG | + | chr3_2:8170474-8170493 | None:intergenic | 40.0% | |
| ! | TGTTTTCTTTGCAGGACCAT+TGG | - | chr3_2:8170560-8170579 | Msa0393900:intron | 40.0% |
| CACTTGACAATGCTTTCACA+TGG | - | chr3_2:8170716-8170735 | Msa0393900:CDS | 40.0% | |
| ! | TTTGTAACTTGCAGTAGGCA+TGG | - | chr3_2:8171231-8171250 | Msa0393900:intron | 40.0% |
| ! | TTGTAACTTGCAGTAGGCAT+GGG | - | chr3_2:8171232-8171251 | Msa0393900:intron | 40.0% |
| GCAGTTGAAGGTTCTCAAAA+TGG | - | chr3_2:8171279-8171298 | Msa0393900:intron | 40.0% | |
| CTGCCTTGTAATAGTTCTTG+AGG | + | chr3_2:8171875-8171894 | None:intergenic | 40.0% | |
| !!! | AGTTTTGAATCTGTGGCCAA+TGG | + | chr3_2:8171951-8171970 | None:intergenic | 40.0% |
| CATAAGAAATGATAGAGCCG+GGG | - | chr3_2:8172079-8172098 | Msa0393900:intron | 40.0% | |
| GTTCTATTTAGGGGAATGGA+CGG | - | chr3_2:8172580-8172599 | Msa0393900:intron | 40.0% | |
| ATTCTCGTGCAACATTTGGA+TGG | - | chr3_2:8172672-8172691 | Msa0393900:CDS | 40.0% | |
| TTCTCGTGCAACATTTGGAT+GGG | - | chr3_2:8172673-8172692 | Msa0393900:CDS | 40.0% | |
| !! | CAACATTTGGATGGGCTTTT+TGG | - | chr3_2:8172681-8172700 | Msa0393900:CDS | 40.0% |
| ATAACCATTGGAGTCTCAAG+TGG | - | chr3_2:8172720-8172739 | Msa0393900:CDS | 40.0% | |
| CTCAAGTGGTTGATCGAAAA+TGG | - | chr3_2:8172734-8172753 | Msa0393900:CDS | 40.0% | |
| GAGGCTATAAATAGTGCCCT+TGG | - | chr3_2:8167760-8167779 | Msa0393900:three_prime_UTR | 45.0% | |
| ! | TAAGCAAACGAAAGAGCGTG+AGG | + | chr3_2:8167871-8167890 | None:intergenic | 45.0% |
| ATGGAACCTTCTCGCTTTGA+CGG | - | chr3_2:8167934-8167953 | Msa0393900:three_prime_UTR | 45.0% | |
| ACAATTCCGTCAAAGCGAGA+AGG | + | chr3_2:8167943-8167962 | None:intergenic | 45.0% | |
| ACGTGTCTGTCTATCGTAGT+AGG | + | chr3_2:8168295-8168314 | None:intergenic | 45.0% | |
| GTGAATAAGTGAGCTGTCTG+AGG | + | chr3_2:8168571-8168590 | None:intergenic | 45.0% | |
| CTGAATGTTTCCCAACCAGA+AGG | + | chr3_2:8169590-8169609 | None:intergenic | 45.0% | |
| ! | CTTCTGGTTGGGAAACATTC+AGG | - | chr3_2:8169588-8169607 | Msa0393900:intron | 45.0% |
| ATAGAGCTCCTCAAGTCATG+AGG | - | chr3_2:8170463-8170482 | Msa0393900:intron | 45.0% | |
| TAGAGCTCCTCAAGTCATGA+GGG | - | chr3_2:8170464-8170483 | Msa0393900:intron | 45.0% | |
| TGAGCTATTCACCATCCAAC+AGG | + | chr3_2:8170652-8170671 | None:intergenic | 45.0% | |
| ! | AACCCACCTAAGCCTTTTGT+TGG | - | chr3_2:8170679-8170698 | Msa0393900:CDS | 45.0% |
| ! | ACCCACCTAAGCCTTTTGTT+GGG | - | chr3_2:8170680-8170699 | Msa0393900:CDS | 45.0% |
| GCATGGGATGAAAGTGATTG+TGG | - | chr3_2:8171248-8171267 | Msa0393900:intron | 45.0% | |
| ! | GAGCATAGTGGAACAAGAGA+TGG | - | chr3_2:8171306-8171325 | Msa0393900:intron | 45.0% |
| TCTATGACAGAGACTGTCTG+TGG | + | chr3_2:8171360-8171379 | None:intergenic | 45.0% | |
| AGGCAGCTTATGATGTTGTG+AGG | - | chr3_2:8171889-8171908 | Msa0393900:intron | 45.0% | |
| AGAGAAACCACTAAGATCCC+CGG | + | chr3_2:8172099-8172118 | None:intergenic | 45.0% | |
| GTTGCAGTTACCAAGTGTGA+AGG | - | chr3_2:8172362-8172381 | Msa0393900:intron | 45.0% | |
| TCAACCACTTGAGACTCCAA+TGG | + | chr3_2:8172727-8172746 | None:intergenic | 45.0% | |
| TGTAAGGGGTTCTTCTTTCC+CGG | - | chr3_2:8172774-8172793 | Msa0393900:five_prime_UTR | 45.0% | |
| !!! | ATAATATAATATAATAGTTT+TGG | + | chr3_2:8168146-8168165 | None:intergenic | 5.0% |
| !!! | ATTTTTTTTTTTACTATTTA+TGG | + | chr3_2:8171447-8171466 | None:intergenic | 5.0% |
| ! | CCTGAGTTGGCTATCACCAA+GGG | + | chr3_2:8167779-8167798 | None:intergenic | 50.0% |
| ! | TCCTGAGTTGGCTATCACCA+AGG | + | chr3_2:8167780-8167799 | None:intergenic | 50.0% |
| !! | GGAAACTGGCTTGTTGCTGA+AGG | - | chr3_2:8167907-8167926 | Msa0393900:three_prime_UTR | 50.0% |
| !! | ACTGGCTTGTTGCTGAAGGA+TGG | - | chr3_2:8167911-8167930 | Msa0393900:three_prime_UTR | 50.0% |
| ! | GCTTGTTGCTGAAGGATGGA+TGG | - | chr3_2:8167915-8167934 | Msa0393900:three_prime_UTR | 50.0% |
| TGGCAGAGGTTTGAACCCTA+AGG | + | chr3_2:8168432-8168451 | None:intergenic | 50.0% | |
| !!! | GTTTTGTTTAGCCCCATGGC+CGG | - | chr3_2:8169362-8169381 | Msa0393900:intron | 50.0% |
| ACCAGAAGGTGAACTACGGT+CGG | + | chr3_2:8169576-8169595 | None:intergenic | 50.0% | |
| ACCGTAGTTCACCTTCTGGT+TGG | - | chr3_2:8169576-8169595 | Msa0393900:intron | 50.0% | |
| CCCAACCAGAAGGTGAACTA+CGG | + | chr3_2:8169580-8169599 | None:intergenic | 50.0% | |
| ! | CCGTAGTTCACCTTCTGGTT+GGG | - | chr3_2:8169577-8169596 | Msa0393900:intron | 50.0% |
| ! | TGGCTCATTTGCAGCTTTGG+AGG | - | chr3_2:8169708-8169727 | Msa0393900:intron | 50.0% |
| !! | GGCTCATTTGCAGCTTTGGA+GGG | - | chr3_2:8169709-8169728 | Msa0393900:intron | 50.0% |
| GATGCAGTGAGGATACCTGT+TGG | - | chr3_2:8170634-8170653 | Msa0393900:intron | 50.0% | |
| CAGTGAGGATACCTGTTGGA+TGG | - | chr3_2:8170638-8170657 | Msa0393900:intron | 50.0% | |
| CCCCAACAAAAGGCTTAGGT+GGG | + | chr3_2:8170684-8170703 | None:intergenic | 50.0% | |
| ! | CCCACCTAAGCCTTTTGTTG+GGG | - | chr3_2:8170681-8170700 | Msa0393900:CDS | 50.0% |
| ! | CCACCTAAGCCTTTTGTTGG+GGG | - | chr3_2:8170682-8170701 | Msa0393900:CDS | 50.0% |
| GTGGACTTGCATGCAGTTGA+AGG | - | chr3_2:8171267-8171286 | Msa0393900:intron | 50.0% | |
| ACGGCTGAATGGAGCATACA+AGG | - | chr3_2:8172599-8172618 | Msa0393900:CDS | 50.0% | |
| TGAGACTACAATGGTTGGGC+CGG | + | chr3_2:8172796-8172815 | None:intergenic | 50.0% | |
| ! | CCCTTGGTGATAGCCAACTC+AGG | - | chr3_2:8167776-8167795 | Msa0393900:three_prime_UTR | 55.0% |
| CTTTGCGCTGAAAATGGGGG+AGG | - | chr3_2:8169536-8169555 | Msa0393900:intron | 55.0% | |
| CCCCCAACAAAAGGCTTAGG+TGG | + | chr3_2:8170685-8170704 | None:intergenic | 55.0% | |
| GCTCCCCCAACAAAAGGCTT+AGG | + | chr3_2:8170688-8170707 | None:intergenic | 55.0% | |
| ! | GCCTTTTGTTGGGGGAGCTT+TGG | - | chr3_2:8170690-8170709 | Msa0393900:CDS | 55.0% |
| GCCAAAGCTCCCCCAACAAA+AGG | + | chr3_2:8170694-8170713 | None:intergenic | 55.0% | |
| GATAGAGCCGGGGATCTTAG+TGG | - | chr3_2:8172089-8172108 | Msa0393900:intron | 55.0% | |
| TAGGGGAATGGACGGCTGAA+TGG | - | chr3_2:8172588-8172607 | Msa0393900:intron | 55.0% | |
| GAGACTACAATGGTTGGGCC+GGG | + | chr3_2:8172795-8172814 | None:intergenic | 55.0% | |
| GCCGACCGTAGTTCACCTTC+TGG | - | chr3_2:8169572-8169591 | Msa0393900:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 8167704 | 8172864 | 8167704 | ID=Msa0393900;Name=Msa0393900 |
| chr3_2 | mRNA | 8167704 | 8172864 | 8167704 | ID=Msa0393900-mRNA-1;Parent=Msa0393900;Name=Msa0393900-mRNA-1;_AED=0.32;_eAED=0.32;_QI=110|1|1|1|0.85|0.87|8|845|241 |
| chr3_2 | exon | 8167704 | 8167977 | 8167704 | ID=Msa0393900-mRNA-1:exon:2104;Parent=Msa0393900-mRNA-1 |
| chr3_2 | exon | 8168425 | 8168765 | 8168425 | ID=Msa0393900-mRNA-1:exon:2103;Parent=Msa0393900-mRNA-1 |
| chr3_2 | exon | 8169174 | 8169323 | 8169174 | ID=Msa0393900-mRNA-1:exon:2102;Parent=Msa0393900-mRNA-1 |
| chr3_2 | exon | 8169825 | 8169994 | 8169825 | ID=Msa0393900-mRNA-1:exon:2101;Parent=Msa0393900-mRNA-1 |
| chr3_2 | exon | 8170083 | 8170235 | 8170083 | ID=Msa0393900-mRNA-1:exon:2100;Parent=Msa0393900-mRNA-1 |
| chr3_2 | exon | 8170649 | 8170846 | 8170649 | ID=Msa0393900-mRNA-1:exon:2099;Parent=Msa0393900-mRNA-1 |
| chr3_2 | exon | 8170958 | 8171077 | 8170958 | ID=Msa0393900-mRNA-1:exon:2098;Parent=Msa0393900-mRNA-1 |
| chr3_2 | exon | 8172590 | 8172864 | 8172590 | ID=Msa0393900-mRNA-1:exon:2097;Parent=Msa0393900-mRNA-1 |
| chr3_2 | five_prime_UTR | 8172755 | 8172864 | 8172755 | ID=Msa0393900-mRNA-1:five_prime_utr;Parent=Msa0393900-mRNA-1 |
| chr3_2 | CDS | 8172590 | 8172754 | 8172590 | ID=Msa0393900-mRNA-1:cds;Parent=Msa0393900-mRNA-1 |
| chr3_2 | CDS | 8170958 | 8171077 | 8170958 | ID=Msa0393900-mRNA-1:cds;Parent=Msa0393900-mRNA-1 |
| chr3_2 | CDS | 8170649 | 8170846 | 8170649 | ID=Msa0393900-mRNA-1:cds;Parent=Msa0393900-mRNA-1 |
| chr3_2 | CDS | 8170083 | 8170235 | 8170083 | ID=Msa0393900-mRNA-1:cds;Parent=Msa0393900-mRNA-1 |
| chr3_2 | CDS | 8169905 | 8169994 | 8169905 | ID=Msa0393900-mRNA-1:cds;Parent=Msa0393900-mRNA-1 |
| chr3_2 | three_prime_UTR | 8169825 | 8169904 | 8169825 | ID=Msa0393900-mRNA-1:three_prime_utr;Parent=Msa0393900-mRNA-1 |
| chr3_2 | three_prime_UTR | 8169174 | 8169323 | 8169174 | ID=Msa0393900-mRNA-1:three_prime_utr;Parent=Msa0393900-mRNA-1 |
| chr3_2 | three_prime_UTR | 8168425 | 8168765 | 8168425 | ID=Msa0393900-mRNA-1:three_prime_utr;Parent=Msa0393900-mRNA-1 |
| chr3_2 | three_prime_UTR | 8167704 | 8167977 | 8167704 | ID=Msa0393900-mRNA-1:three_prime_utr;Parent=Msa0393900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
