AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1256730


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1256730 MtrunA17_Chr4g0055471 93.552 822 45 3 1 821 1 815 0.0 1544
Msa1256730 MtrunA17_Chr8g0380281 62.138 795 281 7 32 821 3 782 0.0 988
Msa1256730 MtrunA17_Chr7g0268981 51.549 807 324 7 21 821 28 773 0.0 845
Msa1256730 MtrunA17_Chr8g0344561 61.184 608 187 6 215 821 13 572 0.0 768
Msa1256730 MtrunA17_Chr8g0365001 46.442 801 394 9 35 821 61 840 0.0 714
Msa1256730 MtrunA17_Chr2g0279131 43.939 792 421 8 38 821 73 849 0.0 674
Msa1256730 MtrunA17_Chr3g0128831 44.320 801 414 10 42 819 1 792 0.0 667
Msa1256730 MtrunA17_Chr5g0429991 43.625 800 412 8 38 821 73 849 0.0 664
Msa1256730 MtrunA17_Chr6g0451081 42.875 779 408 9 61 821 17 776 0.0 659
Msa1256730 MtrunA17_Chr2g0297291 43.758 809 423 13 20 821 6 789 0.0 654
Msa1256730 MtrunA17_Chr6g0461871 43.073 794 427 7 44 821 1 785 0.0 649
Msa1256730 MtrunA17_Chr4g0052401 45.050 808 409 12 22 821 7 787 0.0 645
Msa1256730 MtrunA17_Chr8g0344591 63.004 446 145 2 215 660 13 438 0.0 608
Msa1256730 MtrunA17_Chr5g0430731 38.243 808 431 7 24 821 5 754 0.0 591
Msa1256730 MtrunA17_Chr8g0387661 39.820 776 434 11 67 821 29 792 0.0 551
Msa1256730 MtrunA17_Chr8g0365031 51.805 471 212 3 230 687 38 506 4.60e-176 518
Msa1256730 MtrunA17_Chr8g0365031 33.333 126 77 3 701 821 428 551 1.00e-14 78.2
Msa1256730 MtrunA17_Chr8g0393241 33.833 801 489 8 53 821 8 799 2.96e-159 483
Msa1256730 MtrunA17_Chr8g0375411 40.294 613 348 6 52 659 16 615 4.79e-157 474
Msa1256730 MtrunA17_Chr2g0297311 49.550 444 215 6 20 458 6 445 5.15e-136 411
Msa1256730 MtrunA17_Chr5g0413721 48.284 437 209 6 42 464 1 434 3.95e-133 417
Msa1256730 MtrunA17_Chr5g0413721 34.511 368 226 3 457 821 516 871 5.99e-62 224
Msa1256730 MtrunA17_Chr5g0430571 34.732 596 308 10 230 821 17 535 2.29e-112 353
Msa1256730 MtrunA17_Chr8g0344581 74.342 152 35 1 64 215 3 150 1.26e-73 237
Msa1256730 MtrunA17_Chr8g0344551 74.342 152 35 1 64 215 3 150 1.76e-73 236
Msa1256730 MtrunA17_Chr8g0365041 55.000 220 92 3 8 223 6 222 3.01e-69 228
Msa1256730 MtrunA17_Chr2g0297321 36.216 370 205 8 458 821 3 347 7.52e-68 228
Msa1256730 MtrunA17_Chr5g0413751 39.429 175 106 0 458 632 133 307 1.61e-42 157
Msa1256730 MtrunA17_Chr5g0413751 43.478 92 48 1 124 211 47 138 1.45e-12 69.3
Msa1256730 MtrunA17_Chr5g0430551 48.052 154 76 2 65 215 11 163 1.31e-41 150
Msa1256730 MtrunA17_Chr8g0344601 67.532 77 24 1 745 821 1 76 7.11e-27 104
Msa1256730 MtrunA17_Chr1g0159401 46.218 119 54 3 213 328 12 123 1.23e-22 95.5
Msa1256730 MtrunA17_Chr6g0467721 40.602 133 74 3 226 356 19 148 4.81e-15 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1256730 AT4G13420.1 59.102 802 292 7 23 821 17 785 0.0 972
Msa1256730 AT1G60160.1 45.324 834 415 10 4 821 19 827 0.0 749
Msa1256730 AT5G14880.1 44.784 786 398 11 54 819 10 779 0.0 664
Msa1256730 AT2G40540.1 42.750 800 428 9 42 819 1 792 0.0 656
Msa1256730 AT2G40540.5 42.750 800 428 9 42 819 1 792 0.0 656
Msa1256730 AT2G40540.4 42.750 800 428 9 42 819 1 792 0.0 656
Msa1256730 AT2G40540.2 42.750 800 428 9 42 819 1 792 0.0 656
Msa1256730 AT2G40540.3 42.750 800 428 9 42 819 1 792 0.0 656
Msa1256730 AT4G33530.1 43.216 796 420 9 39 821 79 855 0.0 653
Msa1256730 AT2G35060.4 43.688 808 421 8 20 821 13 792 0.0 644
Msa1256730 AT2G35060.1 43.688 808 421 8 20 821 13 792 0.0 644
Msa1256730 AT2G35060.3 43.688 808 421 8 20 821 13 792 0.0 644
Msa1256730 AT1G31120.1 44.636 811 413 11 20 821 13 796 0.0 641
Msa1256730 AT2G35060.2 43.634 809 421 9 20 821 13 793 0.0 639
Msa1256730 AT5G09400.1 42.503 807 416 9 38 821 77 858 0.0 632
Msa1256730 AT4G19960.2 43.333 810 432 9 23 821 14 807 0.0 629
Msa1256730 AT1G70300.1 41.457 796 436 10 42 821 1 782 0.0 628
Msa1256730 AT4G19960.1 42.494 826 432 10 23 821 14 823 0.0 619
Msa1256730 AT4G19960.3 41.986 836 432 10 23 821 14 833 0.0 614
Msa1256730 AT3G02050.1 41.110 793 428 7 52 821 13 789 0.0 586
Msa1256730 AT2G30070.1 45.188 613 329 3 51 657 12 623 0.0 581
Msa1256730 AT4G23640.1 39.300 771 443 7 65 819 12 773 0.0 570
Msa1256730 AT4G33530.2 42.022 633 337 7 200 821 14 627 1.96e-171 509
Msa1256730 AT4G19960.4 42.167 600 328 4 227 821 1 586 7.57e-161 481
Msa1256730 AT2G30070.2 44.334 503 276 2 158 657 2 503 1.45e-155 467

Find 149 sgRNAs with CRISPR-Local

Find 266 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGCTTCTGCTTCAGTTTA+TGG 0.109672 8_2:-57004785 None:intergenic
TTAATATGGTTTACATTTAT+TGG 0.125815 8_2:+57005507 Msa1256730:CDS
TTATTCAAAATGGAAGAATT+TGG 0.162089 8_2:-57007884 None:intergenic
TGACAATAATTATGGGAATT+TGG 0.164270 8_2:+57007123 Msa1256730:CDS
AAGTAATCAACAATATATTT+TGG 0.188421 8_2:-57005588 None:intergenic
TGAGGCCATGTTTGCTGATT+TGG 0.205167 8_2:+57005760 Msa1256730:CDS
TTATATGGAAGAAGAGTTTA+TGG 0.211536 8_2:+57006988 Msa1256730:CDS
ATTCTCACTCCATCTATTTC+AGG 0.216313 8_2:+57004882 Msa1256730:CDS
CATGTCTTCTGGTTGTTGAT+TGG 0.247756 8_2:-57004712 None:intergenic
GGGCATCACTGTAGCAATTT+TGG 0.261889 8_2:+57005419 Msa1256730:CDS
AAGCTTCTGCTTCAGTTTAT+GGG 0.263684 8_2:-57004784 None:intergenic
AATGCAGGGATTGCTGTTAT+TGG 0.264070 8_2:+57006921 Msa1256730:intron
GCAATATTGATAGCATATAT+TGG 0.264512 8_2:+57006136 Msa1256730:CDS
GCTAGTCAAGCAATGATTTC+AGG 0.264683 8_2:+57006634 Msa1256730:CDS
CACTTATAATGCTTGTTATA+TGG 0.270739 8_2:+57006973 Msa1256730:CDS
CCAACATTTGTTGTGGCTAT+TGG 0.271020 8_2:+57006598 Msa1256730:CDS
TACGTTCTTGACAATAATTA+TGG 0.282502 8_2:+57007115 Msa1256730:CDS
TCTTCAGGTCCTTGGATGAT+AGG 0.304795 8_2:-57007785 None:intergenic
GACAACAATCTTATTCAAAA+TGG 0.308809 8_2:-57007894 None:intergenic
AAAGACAACGATGACATTCT+TGG 0.311401 8_2:+57003243 Msa1256730:CDS
TTAGAGAGTTCCATGTCTTC+TGG 0.319849 8_2:-57004723 None:intergenic
TATTCAAAATGGAAGAATTT+GGG 0.323862 8_2:-57007883 None:intergenic
CAAATCGTTGCATACAAAAT+AGG 0.330136 8_2:-57005446 None:intergenic
GTAAACCATATTAAAATAAC+TGG 0.336183 8_2:-57005498 None:intergenic
TACCGAGTATTTGAAGGAAT+TGG 0.337985 8_2:+57007196 Msa1256730:CDS
TTTACATTTATTGGTGGTAT+TGG 0.340172 8_2:+57005516 Msa1256730:CDS
TCCAAAGCAACTCTATTAAC+TGG 0.344205 8_2:-57007365 None:intergenic
ACTAAGGGCTTGTGATATAA+TGG 0.344601 8_2:-57006665 None:intergenic
CCAAAGTCTACCAATTCTTC+TGG 0.346530 8_2:+57007668 Msa1256730:CDS
GCTATAAAGTGCGTAAATAT+TGG 0.346746 8_2:-57007290 None:intergenic
ATGTCTTCTGGTTGTTGATT+GGG 0.349845 8_2:-57004711 None:intergenic
GAGGCCATGTTTGCTGATTT+GGG 0.352374 8_2:+57005761 Msa1256730:CDS
TCGTGTAGACTCTCTCAATT+TGG 0.352874 8_2:+57002945 Msa1256730:CDS
TCCAGTTAATAGAGTTGCTT+TGG 0.354268 8_2:+57007364 Msa1256730:CDS
CATTGCTTGACTAGCTATAA+TGG 0.356396 8_2:-57006626 None:intergenic
TTATTTCCTCTTCAGGTCCT+TGG 0.364757 8_2:-57007793 None:intergenic
GGAATTGTATATGGTGATAT+TGG 0.365329 8_2:+57003174 Msa1256730:CDS
ATCAACTACATGTTCTTGAT+TGG 0.366077 8_2:+57006760 Msa1256730:CDS
CAAAGCATAGGAATTGTATA+TGG 0.366388 8_2:+57003165 Msa1256730:CDS
CACTATATTCGTTGATATGT+AGG 0.379920 8_2:+57004667 Msa1256730:CDS
GTTGATTACTTCAAACGAAA+TGG 0.384165 8_2:+57005600 Msa1256730:CDS
CGAAATATTCTATACTCTCT+TGG 0.385653 8_2:-57007416 None:intergenic
AGGTTGTTTCCCTAGAGTTA+AGG 0.386363 8_2:+57006690 Msa1256730:CDS
ATATGTCTTCATTGTCTTGT+GGG 0.403065 8_2:+57003314 Msa1256730:CDS
GATCAAATGCAAGATATATC+AGG 0.403868 8_2:+57007632 Msa1256730:CDS
CCAGAAGAATTGGTAGACTT+TGG 0.403986 8_2:-57007668 None:intergenic
CGCAAGAGACTTCTTAAAGT+TGG 0.407997 8_2:+57007980 Msa1256730:CDS
ATATATGCTATCAATATTGC+AGG 0.413376 8_2:-57006133 None:intergenic
CAATATTGATAGCATATATT+GGG 0.415101 8_2:+57006137 Msa1256730:CDS
TAGGCATATAAAGATGAGTT+TGG 0.416280 8_2:+57004686 Msa1256730:CDS
GATTATTCTACCAGAAGAAT+TGG 0.419722 8_2:-57007678 None:intergenic
TTGGAGCGTGACATTGAGTT+TGG 0.427209 8_2:+57003137 Msa1256730:CDS
ACGTTCTTGACAATAATTAT+GGG 0.428932 8_2:+57007116 Msa1256730:CDS
GAACACAACAACTGAATGAA+TGG 0.432530 8_2:-57007324 None:intergenic
TATAACCAACCTGAAATAGA+TGG 0.435456 8_2:-57004891 None:intergenic
AAGAACGTAGCTAGTACAAT+TGG 0.440233 8_2:-57007101 None:intergenic
AATATGTCTTCATTGTCTTG+TGG 0.448812 8_2:+57003313 Msa1256730:CDS
AAGAACATGTAGTTGATCTC+TGG 0.449490 8_2:-57006754 None:intergenic
TATAGATAAAGCAACAGAAA+AGG 0.452695 8_2:+57007820 Msa1256730:CDS
AAGGGTGTGGTATATATGAT+AGG 0.453426 8_2:+57007839 Msa1256730:CDS
GTACATAGAGTGCCTGGGAT+TGG 0.463256 8_2:+57007233 Msa1256730:CDS
GACTCTCTCAATTTGGAAGC+TGG 0.465241 8_2:+57002952 Msa1256730:CDS
AGTTTCTACCGAGTATTTGA+AGG 0.465367 8_2:+57007190 Msa1256730:CDS
TAGGGAAACAACCTAGACTA+AGG 0.467128 8_2:-57006681 None:intergenic
CAGTCCTTTCTGCGGTGAGC+GGG 0.472215 8_2:+57005033 Msa1256730:intron
CTTGCGCAAGAACTTTAGAC+AGG 0.474696 8_2:+57007934 Msa1256730:CDS
GTACTTGCATACACATAAAG+TGG 0.475123 8_2:-57003204 None:intergenic
ATAGAGTTGCTTTGGAAGAG+AGG 0.476150 8_2:+57007372 Msa1256730:CDS
GTATGAACAACCTTAACTCT+AGG 0.477403 8_2:-57006700 None:intergenic
ACAAATGTACATAGAGTGCC+TGG 0.477533 8_2:+57007227 Msa1256730:CDS
CAAATAACCAAGTTCACAAA+AGG 0.480606 8_2:+57007068 Msa1256730:CDS
ATGGGAACTTCCATGGTCAT+AGG 0.481038 8_2:+57004852 Msa1256730:CDS
TTTATGCTTGAGGTTAATGA+AGG 0.481782 8_2:+57007539 Msa1256730:CDS
GAAGAAGCTGAAAGATAGAA+AGG 0.483835 8_2:+57002903 Msa1256730:CDS
CGCGGTTACAATGATACGCT+TGG 0.490134 8_2:+57007452 Msa1256730:CDS
ATAGATAAAGCAACAGAAAA+GGG 0.491270 8_2:+57007821 Msa1256730:CDS
CAAATGTTGGCCAATACAAT+GGG 0.492845 8_2:-57006585 None:intergenic
GAGCGGGATCAGTACATCAC+TGG 0.494290 8_2:+57005049 Msa1256730:CDS
GAAAATATCAGTCATGCCTA+TGG 0.496765 8_2:+57006817 Msa1256730:CDS
TATGCAAGTACTTTCACTAA+AGG 0.504128 8_2:+57003216 Msa1256730:CDS
ACATGAGACACACCATGACT+TGG 0.505897 8_2:-57007701 None:intergenic
TTGTATTCCGAGCTTGTACA+AGG 0.508381 8_2:+57007260 Msa1256730:CDS
ATATGGTTTACATTTATTGG+TGG 0.510397 8_2:+57005510 Msa1256730:CDS
AACATGCAGACCCATTGTAT+TGG 0.513817 8_2:+57006575 Msa1256730:intron
ACGATTTGGTACTGATAAAG+TGG 0.520624 8_2:+57005461 Msa1256730:CDS
ACAAATGTTGGCCAATACAA+TGG 0.524053 8_2:-57006586 None:intergenic
TTACTTCAAACGAAATGGTA+AGG 0.525749 8_2:+57005605 Msa1256730:CDS
ATATCACAAGCCCTTAGTCT+AGG 0.528128 8_2:+57006670 Msa1256730:CDS
TGCCAATTCCTTCAAATACT+CGG 0.529516 8_2:-57007198 None:intergenic
CCAATAGCCACAACAAATGT+TGG 0.536355 8_2:-57006598 None:intergenic
GCGGTTACAATGATACGCTT+GGG 0.536786 8_2:+57007453 Msa1256730:CDS
AATCCCGTCTCCTATGACCA+TGG 0.540769 8_2:-57004862 None:intergenic
TTCAAACGAAATGGTAAGGA+AGG 0.540812 8_2:+57005609 Msa1256730:CDS
ATGAAGACATATTTGAGCAT+GGG 0.542915 8_2:-57003303 None:intergenic
TGAAAGATAGAAAGGTGTCA+TGG 0.543992 8_2:+57002911 Msa1256730:CDS
AGCTATAATGGGAACTTCCA+TGG 0.544985 8_2:+57004845 Msa1256730:CDS
AACGAAATGGTAAGGAAGGA+TGG 0.546490 8_2:+57005613 Msa1256730:CDS
AGGAATTCCTTGTACAAGCT+CGG 0.552364 8_2:-57007267 None:intergenic
CATACTTCAGCTAAGCATCA+AGG 0.555262 8_2:+57006718 Msa1256730:CDS
CAATCAACAACCAGAAGACA+TGG 0.555396 8_2:+57004713 Msa1256730:CDS
AATGAAGACATATTTGAGCA+TGG 0.556582 8_2:-57003304 None:intergenic
GCATGAAGACCTTGGAATTG+TGG 0.557135 8_2:-57002996 None:intergenic
ACATTCTATGACAGTATACC+AGG 0.564351 8_2:+57006202 Msa1256730:CDS
GCAGTCCTTTCTGCGGTGAG+CGG 0.568675 8_2:+57005032 Msa1256730:intron
TGATCCCGCTCACCGCAGAA+AGG 0.569796 8_2:-57005037 None:intergenic
GTGACCCAAATCAGCAAACA+TGG 0.571158 8_2:-57005765 None:intergenic
TATGAACAACCTTAACTCTA+GGG 0.573338 8_2:-57006699 None:intergenic
ACTTCCATGGTCATAGGAGA+CGG 0.573794 8_2:+57004858 Msa1256730:CDS
ATAAAGTGCGTAAATATTGG+AGG 0.575523 8_2:-57007287 None:intergenic
AATTGTGACTCAAACTCCAC+AGG 0.576925 8_2:-57007479 None:intergenic
AGTTTGGCATTTCAAAGCAT+AGG 0.578744 8_2:+57003153 Msa1256730:CDS
GAAAGATAGAAAGGTGTCAT+GGG 0.579627 8_2:+57002912 Msa1256730:CDS
CTTCCATGGTCATAGGAGAC+GGG 0.580772 8_2:+57004859 Msa1256730:CDS
GAATATTTCGATGTGTTGCA+AGG 0.582921 8_2:+57007429 Msa1256730:CDS
TTCTATGCACCTATCATCCA+AGG 0.583572 8_2:+57007776 Msa1256730:CDS
ACAACAACTGAATGAATGGA+TGG 0.583902 8_2:-57007320 None:intergenic
ACAATTAATACAAAATCTCA+AGG 0.584536 8_2:+57007496 Msa1256730:CDS
CTTTAAGAAGTCTCTTGCGT+GGG 0.585069 8_2:-57007976 None:intergenic
ATGGAAGAAGAGTTTATGGA+TGG 0.585677 8_2:+57006992 Msa1256730:CDS
CATGAGACACACCATGACTT+GGG 0.591159 8_2:-57007700 None:intergenic
AACAGATCGAGTGAGCATAG+AGG 0.593649 8_2:+57002849 Msa1256730:CDS
ACATATGATCATAGGATCTG+AGG 0.593889 8_2:+57005742 Msa1256730:intron
ATAACCAAGTTCACAAAAGG+AGG 0.599159 8_2:+57007071 Msa1256730:CDS
TATGTGTCATGCAGGTGGGT+TGG 0.599730 8_2:+57003118 Msa1256730:intron
TTTCGATGTGTTGCAAGGCG+CGG 0.607397 8_2:+57007434 Msa1256730:CDS
TCTCTTGCGTGGGATTGCAA+TGG 0.608590 8_2:-57007966 None:intergenic
GAATGCAAACCACAATTCCA+AGG 0.608592 8_2:+57002987 Msa1256730:CDS
TATCATCCAAGGACCTGAAG+AGG 0.610395 8_2:+57007787 Msa1256730:CDS
ATATATGATAGGTGAAGCAG+AGG 0.610482 8_2:+57007850 Msa1256730:CDS
AGGGAAACAACCTAGACTAA+GGG 0.612954 8_2:-57006680 None:intergenic
AAGAAAGTTTCCTGAAAACG+TGG 0.613203 8_2:+57006174 Msa1256730:CDS
ACTTTAAGAAGTCTCTTGCG+TGG 0.613924 8_2:-57007977 None:intergenic
TGAAGACATATTTGAGCATG+GGG 0.616206 8_2:-57003302 None:intergenic
TAAAGCAACAGAAAAGGGTG+TGG 0.618850 8_2:+57007826 Msa1256730:CDS
GTATTGGCCAACATTTGTTG+TGG 0.621290 8_2:+57006591 Msa1256730:CDS
AAGGAAGGATGGCTATCACT+AGG 0.622756 8_2:+57005624 Msa1256730:CDS
AGAAAGTTTCCTGAAAACGT+GGG 0.623461 8_2:+57006175 Msa1256730:CDS
GGTAGAATAATCCCAAGTCA+TGG 0.629357 8_2:+57007689 Msa1256730:CDS
GAATACAAAAGTCCAATCCC+AGG 0.631248 8_2:-57007245 None:intergenic
AGCGGGATCAGTACATCACT+GGG 0.633152 8_2:+57005050 Msa1256730:CDS
TTGCGCAAGAACTTTAGACA+GGG 0.636029 8_2:+57007935 Msa1256730:CDS
CGATTTGGTACTGATAAAGT+GGG 0.645606 8_2:+57005462 Msa1256730:CDS
GAAAGTTTCCTGAAAACGTG+GGG 0.654964 8_2:+57006176 Msa1256730:CDS
CAAATGTACATAGAGTGCCT+GGG 0.673736 8_2:+57007228 Msa1256730:CDS
GGATGAGACAGAGACAACAA+AGG 0.675047 8_2:+57002870 Msa1256730:CDS
TGGGCTAATGACAATGGCAA+TGG 0.677496 8_2:+57003333 Msa1256730:CDS
TGATACGCTTGGGAATCCTG+TGG 0.684979 8_2:+57007463 Msa1256730:CDS
GTCTTGTGGGCTAATGACAA+TGG 0.702354 8_2:+57003327 Msa1256730:CDS
GAAGGATGGCTATCACTAGG+TGG 0.709671 8_2:+57005627 Msa1256730:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATAAAATTTTAATATAAA+TGG - chr8_2:57003445-57003464 None:intergenic 0.0%
!!! AAAAATTTAAAATTTAATTT+TGG + chr8_2:57003916-57003935 Msa1256730:intron 0.0%
!! TTAAATATGAAAAAGTTAAT+AGG + chr8_2:57003822-57003841 Msa1256730:intron 10.0%
!! AAAAAATCTCAAATTTAAAA+GGG - chr8_2:57004111-57004130 None:intergenic 10.0%
!! AAAAAAATCTCAAATTTAAA+AGG - chr8_2:57004112-57004131 None:intergenic 10.0%
!!! ATATAATATCATTTTTTTGA+AGG + chr8_2:57004429-57004448 Msa1256730:intron 10.0%
!!! TTTTTTTTTTTAACGAATAT+AGG + chr8_2:57004633-57004652 Msa1256730:intron 10.0%
!!! TAAATAATTTTTCCTTAAAA+AGG - chr8_2:57005259-57005278 None:intergenic 10.0%
!!! ATATAATTAATTTGTCAAGA+GGG - chr8_2:57003101-57003120 None:intergenic 15.0%
!! AATTGTTAATATGTAATGTT+AGG - chr8_2:57003500-57003519 None:intergenic 15.0%
!!! TTTAAAGAATAGTTTTTAGA+GGG - chr8_2:57003996-57004015 None:intergenic 15.0%
!!! TTTTAAAGAATAGTTTTTAG+AGG - chr8_2:57003997-57004016 None:intergenic 15.0%
!! TTAATATGGTTTACATTTAT+TGG + chr8_2:57005507-57005526 Msa1256730:CDS 15.0%
!!! AATTTTTTCAAATATGACAT+TGG + chr8_2:57005546-57005565 Msa1256730:CDS 15.0%
!!! AAGTAATCAACAATATATTT+TGG - chr8_2:57005591-57005610 None:intergenic 15.0%
!!! ATATCATTTTGTTTCAAAAA+AGG + chr8_2:57005915-57005934 Msa1256730:intron 15.0%
!! AAAATAAAAAATCAAATGTC+AGG - chr8_2:57006342-57006361 None:intergenic 15.0%
!! AAATTTGATATAATCAAGAT+TGG - chr8_2:57006399-57006418 None:intergenic 15.0%
!!! GATTATATCAAATTTTAATC+TGG + chr8_2:57006404-57006423 Msa1256730:intron 15.0%
!! TAATAATATTGCCTAATTAA+TGG - chr8_2:57006509-57006528 None:intergenic 15.0%
!!! TATATACCCTTTTTTTTTAG+AGG + chr8_2:57003029-57003048 Msa1256730:intron 20.0%
!!! ATAGATCCTCTAAAAAAAAA+GGG - chr8_2:57003038-57003057 None:intergenic 20.0%
!!! TATAGATCCTCTAAAAAAAA+AGG - chr8_2:57003039-57003058 None:intergenic 20.0%
!! ATCTATATCAATGAATTGTT+TGG + chr8_2:57003052-57003071 Msa1256730:intron 20.0%
!!! CATATAATTAATTTGTCAAG+AGG - chr8_2:57003102-57003121 None:intergenic 20.0%
!!! TGTATATTTGACTCTTTTTT+TGG + chr8_2:57003366-57003385 Msa1256730:intron 20.0%
!!! ATTGATCATTTAAGTTGTTT+TGG - chr8_2:57003570-57003589 None:intergenic 20.0%
!! CATTATGATTAAATCAAGAT+TGG - chr8_2:57003699-57003718 None:intergenic 20.0%
!!! TCGAATGATTCTTTTTTTTT+TGG + chr8_2:57004177-57004196 Msa1256730:intron 20.0%
!!! TCTTTTGGTTTAATTTCTAT+AGG + chr8_2:57004224-57004243 Msa1256730:intron 20.0%
!!! GTAACATAATCCTTTTTTTA+AGG + chr8_2:57004381-57004400 Msa1256730:intron 20.0%
!! TGATATTATATGTAGTACTT+AGG - chr8_2:57004420-57004439 None:intergenic 20.0%
!! TAACTTTCATTATAAGTACT+TGG + chr8_2:57004487-57004506 Msa1256730:intron 20.0%
!! AAATCAAACATATGAATGAT+TGG + chr8_2:57004510-57004529 Msa1256730:intron 20.0%
!!! TTTTTTTTAACGAATATAGG+TGG + chr8_2:57004636-57004655 Msa1256730:intron 20.0%
!!! TTTTTTAATGAAACTTGAGT+TGG + chr8_2:57004947-57004966 Msa1256730:intron 20.0%
!!! CAATATATTTGACCTTTTTA+AGG + chr8_2:57005244-57005263 Msa1256730:intron 20.0%
!! AAATCTTTATTATCATCATG+TGG + chr8_2:57005320-57005339 Msa1256730:intron 20.0%
!! GTAAACCATATTAAAATAAC+TGG - chr8_2:57005501-57005520 None:intergenic 20.0%
!!! TTTTTCTTTACTTACTTGAA+TGG - chr8_2:57005804-57005823 None:intergenic 20.0%
!!! CAAGTTCTTCTTTTTTTTTT+TGG + chr8_2:57005947-57005966 Msa1256730:intron 20.0%
!!! CAATATTGATAGCATATATT+GGG + chr8_2:57006137-57006156 Msa1256730:CDS 20.0%
!! ACATAATTAGTAATTACCAT+AGG - chr8_2:57006836-57006855 None:intergenic 20.0%
!! AAAAAGTGACATAGAAATTA+AGG - chr8_2:57006867-57006886 None:intergenic 20.0%
!!! AGTATTCATTTATTTCAAGT+TGG + chr8_2:57006890-57006909 Msa1256730:intron 20.0%
!! ACAATTAATACAAAATCTCA+AGG + chr8_2:57007496-57007515 Msa1256730:CDS 20.0%
!!! ATAAATTTTATTTCCTCTTC+AGG - chr8_2:57007803-57007822 None:intergenic 20.0%
!! TATTCAAAATGGAAGAATTT+GGG - chr8_2:57007886-57007905 None:intergenic 20.0%
!! TTATTCAAAATGGAAGAATT+TGG - chr8_2:57007887-57007906 None:intergenic 20.0%
! ATTAATTATATGTGTCATGC+AGG + chr8_2:57003110-57003129 Msa1256730:intron 25.0%
! GCATATCAAAGAAACTTAAA+AGG + chr8_2:57003532-57003551 Msa1256730:intron 25.0%
!! TCAAATGAAAGTATGAAACT+GGG - chr8_2:57003604-57003623 None:intergenic 25.0%
! ACTATTCAATTTATTTGCCT+TGG + chr8_2:57003637-57003656 Msa1256730:intron 25.0%
! TACTTTAACATGTGTTCTAA+AGG - chr8_2:57003850-57003869 None:intergenic 25.0%
!! ACATGTTAAAGTACTAAAGA+TGG + chr8_2:57003857-57003876 Msa1256730:intron 25.0%
!! TGATATTTGTACAACCATTT+TGG - chr8_2:57004041-57004060 None:intergenic 25.0%
!!! TTTCTTTTCTGAAAAACTAG+AGG - chr8_2:57004140-57004159 None:intergenic 25.0%
!! CACACTTAAATTCAATCTTT+TGG + chr8_2:57004209-57004228 Msa1256730:intron 25.0%
! ATGTTAGAGTCCTTAAAAAA+AGG - chr8_2:57004394-57004413 None:intergenic 25.0%
!! GCTCATTTAAAGAAACTTTT+CGG + chr8_2:57004974-57004993 Msa1256730:intron 25.0%
!!! TTGCTCCAGTTATTTTAATA+TGG + chr8_2:57005493-57005512 Msa1256730:CDS 25.0%
! ATATGGTTTACATTTATTGG+TGG + chr8_2:57005510-57005529 Msa1256730:CDS 25.0%
!! TTTACATTTATTGGTGGTAT+TGG + chr8_2:57005516-57005535 Msa1256730:CDS 25.0%
! ACTAAGATACATATGATCAT+AGG + chr8_2:57005734-57005753 Msa1256730:intron 25.0%
!!! ATACGTATGCTCTAAAAAAT+TGG + chr8_2:57005886-57005905 Msa1256730:intron 25.0%
! ATATATGCTATCAATATTGC+AGG - chr8_2:57006136-57006155 None:intergenic 25.0%
!! GCAATATTGATAGCATATAT+TGG + chr8_2:57006136-57006155 Msa1256730:CDS 25.0%
! TGAAAAATTAATCTACTACC+TGG - chr8_2:57006223-57006242 None:intergenic 25.0%
! CAATTGAAAACTTCATAATG+TGG + chr8_2:57006256-57006275 Msa1256730:intron 25.0%
! AAAAAATCAAATGTCAGGAT+TGG - chr8_2:57006337-57006356 None:intergenic 25.0%
!! TAAACTACCGAATTTTATTC+TGG + chr8_2:57006368-57006387 Msa1256730:intron 25.0%
!!! CACTTATAATGCTTGTTATA+TGG + chr8_2:57006973-57006992 Msa1256730:CDS 25.0%
! TTATATGGAAGAAGAGTTTA+TGG + chr8_2:57006988-57007007 Msa1256730:CDS 25.0%
!!! ATCCTTTTCTTTTTTGGATT+TGG + chr8_2:57007017-57007036 Msa1256730:CDS 25.0%
! TACCAAATCCAAAAAAGAAA+AGG - chr8_2:57007022-57007041 None:intergenic 25.0%
! TACGTTCTTGACAATAATTA+TGG + chr8_2:57007115-57007134 Msa1256730:CDS 25.0%
! ACGTTCTTGACAATAATTAT+GGG + chr8_2:57007116-57007135 Msa1256730:CDS 25.0%
! TGACAATAATTATGGGAATT+TGG + chr8_2:57007123-57007142 Msa1256730:CDS 25.0%
!! CATTTGATCATTTTCATTAG+TGG - chr8_2:57007621-57007640 None:intergenic 25.0%
! TATAGATAAAGCAACAGAAA+AGG + chr8_2:57007820-57007839 Msa1256730:CDS 25.0%
! ATAGATAAAGCAACAGAAAA+GGG + chr8_2:57007821-57007840 Msa1256730:CDS 25.0%
! GACAACAATCTTATTCAAAA+TGG - chr8_2:57007897-57007916 None:intergenic 25.0%
AAAAATATGCATGAAGACCT+TGG - chr8_2:57003007-57003026 None:intergenic 30.0%
CAAAGCATAGGAATTGTATA+TGG + chr8_2:57003165-57003184 Msa1256730:CDS 30.0%
GGAATTGTATATGGTGATAT+TGG + chr8_2:57003174-57003193 Msa1256730:CDS 30.0%
TATGCAAGTACTTTCACTAA+AGG + chr8_2:57003216-57003235 Msa1256730:CDS 30.0%
ATGAAGACATATTTGAGCAT+GGG - chr8_2:57003306-57003325 None:intergenic 30.0%
AATGAAGACATATTTGAGCA+TGG - chr8_2:57003307-57003326 None:intergenic 30.0%
AATATGTCTTCATTGTCTTG+TGG + chr8_2:57003313-57003332 Msa1256730:CDS 30.0%
ATATGTCTTCATTGTCTTGT+GGG + chr8_2:57003314-57003333 Msa1256730:CDS 30.0%
! CAAATGAAAGTATGAAACTG+GGG - chr8_2:57003603-57003622 None:intergenic 30.0%
! CTCAAATGAAAGTATGAAAC+TGG - chr8_2:57003605-57003624 None:intergenic 30.0%
!! CAAATTTGACTCTAAAACCA+AGG - chr8_2:57003657-57003676 None:intergenic 30.0%
ATTGGATCTGGTTAAACTTA+AGG - chr8_2:57003681-57003700 None:intergenic 30.0%
GATTAAATCAAGATTGGATC+TGG - chr8_2:57003693-57003712 None:intergenic 30.0%
GTACAAAAGTTGTACCAAAA+TGG + chr8_2:57004024-57004043 Msa1256730:intron 30.0%
TCATTTCTCTTCTCACAATT+TGG + chr8_2:57004058-57004077 Msa1256730:intron 30.0%
! CGATCTCTTTCTCTAAAAAA+AGG + chr8_2:57004341-57004360 Msa1256730:intron 30.0%
! GAATGATTGGTTGTGATTTA+TGG + chr8_2:57004523-57004542 Msa1256730:intron 30.0%
CACTATATTCGTTGATATGT+AGG + chr8_2:57004667-57004686 Msa1256730:CDS 30.0%
TAGGCATATAAAGATGAGTT+TGG + chr8_2:57004686-57004705 Msa1256730:CDS 30.0%
!! ACTTTTGCTTCTAGCTATAA+TGG + chr8_2:57004833-57004852 Msa1256730:CDS 30.0%
!! CTTTTGCTTCTAGCTATAAT+GGG + chr8_2:57004834-57004853 Msa1256730:CDS 30.0%
TATAACCAACCTGAAATAGA+TGG - chr8_2:57004894-57004913 None:intergenic 30.0%
!! ATGATCCTTAAAAAGTGTCT+TGG - chr8_2:57005189-57005208 None:intergenic 30.0%
!! AGACACTTTTTAAGGATCAT+AGG + chr8_2:57005189-57005208 Msa1256730:intron 30.0%
CAAATCGTTGCATACAAAAT+AGG - chr8_2:57005449-57005468 None:intergenic 30.0%
! CTATTTTGTATGCAACGATT+TGG + chr8_2:57005447-57005466 Msa1256730:CDS 30.0%
GTTGATTACTTCAAACGAAA+TGG + chr8_2:57005600-57005619 Msa1256730:CDS 30.0%
TTACTTCAAACGAAATGGTA+AGG + chr8_2:57005605-57005624 Msa1256730:CDS 30.0%
! TACTCTTTGTTTAAGACACA+CGG + chr8_2:57005853-57005872 Msa1256730:intron 30.0%
GGAAAGTCCAGAATAAAATT+CGG - chr8_2:57006378-57006397 None:intergenic 30.0%
! ATATTGCCTAATTAATGGAC+CGG - chr8_2:57006504-57006523 None:intergenic 30.0%
TATGAACAACCTTAACTCTA+GGG - chr8_2:57006702-57006721 None:intergenic 30.0%
ATCAACTACATGTTCTTGAT+TGG + chr8_2:57006760-57006779 Msa1256730:CDS 30.0%
! ATGGTCATCCTTTTCTTTTT+TGG + chr8_2:57007011-57007030 Msa1256730:CDS 30.0%
CAAATAACCAAGTTCACAAA+AGG + chr8_2:57007068-57007087 Msa1256730:CDS 30.0%
ATAAAGTGCGTAAATATTGG+AGG - chr8_2:57007290-57007309 None:intergenic 30.0%
GCTATAAAGTGCGTAAATAT+TGG - chr8_2:57007293-57007312 None:intergenic 30.0%
CGAAATATTCTATACTCTCT+TGG - chr8_2:57007419-57007438 None:intergenic 30.0%
! ACAAGAGAATTTTATGCTTG+AGG + chr8_2:57007529-57007548 Msa1256730:CDS 30.0%
TTTATGCTTGAGGTTAATGA+AGG + chr8_2:57007539-57007558 Msa1256730:CDS 30.0%
GATCAAATGCAAGATATATC+AGG + chr8_2:57007632-57007651 Msa1256730:CDS 30.0%
GATTATTCTACCAGAAGAAT+TGG - chr8_2:57007681-57007700 None:intergenic 30.0%
GAAGAAGCTGAAAGATAGAA+AGG + chr8_2:57002903-57002922 Msa1256730:CDS 35.0%
!! TGAAAGATAGAAAGGTGTCA+TGG + chr8_2:57002911-57002930 Msa1256730:CDS 35.0%
!! GAAAGATAGAAAGGTGTCAT+GGG + chr8_2:57002912-57002931 Msa1256730:CDS 35.0%
AATTATATGTGTCATGCAGG+TGG + chr8_2:57003113-57003132 Msa1256730:intron 35.0%
ATTATATGTGTCATGCAGGT+GGG + chr8_2:57003114-57003133 Msa1256730:intron 35.0%
AGTTTGGCATTTCAAAGCAT+AGG + chr8_2:57003153-57003172 Msa1256730:CDS 35.0%
GTACTTGCATACACATAAAG+TGG - chr8_2:57003207-57003226 None:intergenic 35.0%
AAAGACAACGATGACATTCT+TGG + chr8_2:57003243-57003262 Msa1256730:CDS 35.0%
TGAAGACATATTTGAGCATG+GGG - chr8_2:57003305-57003324 None:intergenic 35.0%
CTTCTCACAATTTGGTCTAA+CGG + chr8_2:57004066-57004085 Msa1256730:intron 35.0%
TTCTCACAATTTGGTCTAAC+GGG + chr8_2:57004067-57004086 Msa1256730:intron 35.0%
TGGTTGTGATTTATGGAAGA+TGG + chr8_2:57004530-57004549 Msa1256730:intron 35.0%
! ATGTCTTCTGGTTGTTGATT+GGG - chr8_2:57004714-57004733 None:intergenic 35.0%
AAGCTTCTGCTTCAGTTTAT+GGG - chr8_2:57004787-57004806 None:intergenic 35.0%
ATTCTCACTCCATCTATTTC+AGG + chr8_2:57004882-57004901 Msa1256730:CDS 35.0%
! ATTTTATGCAGTCCTTTCTG+CGG + chr8_2:57005025-57005044 Msa1256730:intron 35.0%
!! GTGTTCCAAGACACTTTTTA+AGG + chr8_2:57005181-57005200 Msa1256730:intron 35.0%
!! TTGTTTTTCAGATGCTGTTG+TGG + chr8_2:57005398-57005417 Msa1256730:intron 35.0%
!! TGTTTTTCAGATGCTGTTGT+GGG + chr8_2:57005399-57005418 Msa1256730:intron 35.0%
!! ACGATTTGGTACTGATAAAG+TGG + chr8_2:57005461-57005480 Msa1256730:CDS 35.0%
!! CGATTTGGTACTGATAAAGT+GGG + chr8_2:57005462-57005481 Msa1256730:CDS 35.0%
TTCAAACGAAATGGTAAGGA+AGG + chr8_2:57005609-57005628 Msa1256730:CDS 35.0%
! GGAGTCTTTTTATGCATAAC+AGG + chr8_2:57005648-57005667 Msa1256730:CDS 35.0%
ACATATGATCATAGGATCTG+AGG + chr8_2:57005742-57005761 Msa1256730:intron 35.0%
!! CGTATGCTCTAAAAAATTGG+TGG + chr8_2:57005889-57005908 Msa1256730:intron 35.0%
! ACAAGTTCTAACTTCATGCT+TGG + chr8_2:57005983-57006002 Msa1256730:intron 35.0%
AAGAAAGTTTCCTGAAAACG+TGG + chr8_2:57006174-57006193 Msa1256730:CDS 35.0%
AGAAAGTTTCCTGAAAACGT+GGG + chr8_2:57006175-57006194 Msa1256730:CDS 35.0%
ACATTCTATGACAGTATACC+AGG + chr8_2:57006202-57006221 Msa1256730:CDS 35.0%
! TATTGCCTAATTAATGGACC+GGG - chr8_2:57006503-57006522 None:intergenic 35.0%
CAAATGTTGGCCAATACAAT+GGG - chr8_2:57006588-57006607 None:intergenic 35.0%
ACAAATGTTGGCCAATACAA+TGG - chr8_2:57006589-57006608 None:intergenic 35.0%
! CATTGCTTGACTAGCTATAA+TGG - chr8_2:57006629-57006648 None:intergenic 35.0%
ACTAAGGGCTTGTGATATAA+TGG - chr8_2:57006668-57006687 None:intergenic 35.0%
GTATGAACAACCTTAACTCT+AGG - chr8_2:57006703-57006722 None:intergenic 35.0%
AAGAACATGTAGTTGATCTC+TGG - chr8_2:57006757-57006776 None:intergenic 35.0%
!! GATATTTTCTGTGGTCTTGA+AGG - chr8_2:57006806-57006825 None:intergenic 35.0%
GAAAATATCAGTCATGCCTA+TGG + chr8_2:57006817-57006836 Msa1256730:CDS 35.0%
AAGTTGGAAATGCTTAATGC+AGG + chr8_2:57006906-57006925 Msa1256730:intron 35.0%
AGTTGGAAATGCTTAATGCA+GGG + chr8_2:57006907-57006926 Msa1256730:intron 35.0%
ATGGAAGAAGAGTTTATGGA+TGG + chr8_2:57006992-57007011 Msa1256730:CDS 35.0%
ATAACCAAGTTCACAAAAGG+AGG + chr8_2:57007071-57007090 Msa1256730:CDS 35.0%
! ATATCCTCCTTTTGTGAACT+TGG - chr8_2:57007078-57007097 None:intergenic 35.0%
AAGAACGTAGCTAGTACAAT+TGG - chr8_2:57007104-57007123 None:intergenic 35.0%
AGTTTCTACCGAGTATTTGA+AGG + chr8_2:57007190-57007209 Msa1256730:CDS 35.0%
TACCGAGTATTTGAAGGAAT+TGG + chr8_2:57007196-57007215 Msa1256730:CDS 35.0%
TGCCAATTCCTTCAAATACT+CGG - chr8_2:57007201-57007220 None:intergenic 35.0%
ACAACAACTGAATGAATGGA+TGG - chr8_2:57007323-57007342 None:intergenic 35.0%
GAACACAACAACTGAATGAA+TGG - chr8_2:57007327-57007346 None:intergenic 35.0%
TCCAGTTAATAGAGTTGCTT+TGG + chr8_2:57007364-57007383 Msa1256730:CDS 35.0%
TCCAAAGCAACTCTATTAAC+TGG - chr8_2:57007368-57007387 None:intergenic 35.0%
!! TGGAAGAGAGGTTTTTGTTT+CGG + chr8_2:57007384-57007403 Msa1256730:CDS 35.0%
GAATATTTCGATGTGTTGCA+AGG + chr8_2:57007429-57007448 Msa1256730:CDS 35.0%
! AAGGGTGTGGTATATATGAT+AGG + chr8_2:57007839-57007858 Msa1256730:CDS 35.0%
ATATATGATAGGTGAAGCAG+AGG + chr8_2:57007850-57007869 Msa1256730:CDS 35.0%
TCGTGTAGACTCTCTCAATT+TGG + chr8_2:57002945-57002964 Msa1256730:CDS 40.0%
GAATGCAAACCACAATTCCA+AGG + chr8_2:57002987-57003006 Msa1256730:CDS 40.0%
! CATGTCTTCTGGTTGTTGAT+TGG - chr8_2:57004715-57004734 None:intergenic 40.0%
CAATCAACAACCAGAAGACA+TGG + chr8_2:57004713-57004732 Msa1256730:CDS 40.0%
TTAGAGAGTTCCATGTCTTC+TGG - chr8_2:57004726-57004745 None:intergenic 40.0%
!! GCTCTTTTCTGTTTGCTAGA+TGG - chr8_2:57004765-57004784 None:intergenic 40.0%
CAAGCTTCTGCTTCAGTTTA+TGG - chr8_2:57004788-57004807 None:intergenic 40.0%
! AGCTATAATGGGAACTTCCA+TGG + chr8_2:57004845-57004864 Msa1256730:CDS 40.0%
! TCACTCCATCTATTTCAGGT+TGG + chr8_2:57004886-57004905 Msa1256730:intron 40.0%
AACGAAATGGTAAGGAAGGA+TGG + chr8_2:57005613-57005632 Msa1256730:CDS 40.0%
GAAAGTTTCCTGAAAACGTG+GGG + chr8_2:57006176-57006195 Msa1256730:CDS 40.0%
! AATGTATTCCCCACGTTTTC+AGG - chr8_2:57006187-57006206 None:intergenic 40.0%
AGAAACCCGGTCCATTAATT+AGG + chr8_2:57006495-57006514 Msa1256730:intron 40.0%
AACATGCAGACCCATTGTAT+TGG + chr8_2:57006575-57006594 Msa1256730:intron 40.0%
! GTATTGGCCAACATTTGTTG+TGG + chr8_2:57006591-57006610 Msa1256730:CDS 40.0%
CCAATAGCCACAACAAATGT+TGG - chr8_2:57006601-57006620 None:intergenic 40.0%
!! CCAACATTTGTTGTGGCTAT+TGG + chr8_2:57006598-57006617 Msa1256730:CDS 40.0%
GCTAGTCAAGCAATGATTTC+AGG + chr8_2:57006634-57006653 Msa1256730:CDS 40.0%
ATATCACAAGCCCTTAGTCT+AGG + chr8_2:57006670-57006689 Msa1256730:CDS 40.0%
AGGGAAACAACCTAGACTAA+GGG - chr8_2:57006683-57006702 None:intergenic 40.0%
TAGGGAAACAACCTAGACTA+AGG - chr8_2:57006684-57006703 None:intergenic 40.0%
! AGGTTGTTTCCCTAGAGTTA+AGG + chr8_2:57006690-57006709 Msa1256730:CDS 40.0%
CATACTTCAGCTAAGCATCA+AGG + chr8_2:57006718-57006737 Msa1256730:CDS 40.0%
! GGCATGACTGATATTTTCTG+TGG - chr8_2:57006815-57006834 None:intergenic 40.0%
! AATGCAGGGATTGCTGTTAT+TGG + chr8_2:57006921-57006940 Msa1256730:intron 40.0%
! ACAAATGTACATAGAGTGCC+TGG + chr8_2:57007227-57007246 Msa1256730:CDS 40.0%
! CAAATGTACATAGAGTGCCT+GGG + chr8_2:57007228-57007247 Msa1256730:CDS 40.0%
GAATACAAAAGTCCAATCCC+AGG - chr8_2:57007248-57007267 None:intergenic 40.0%
TTGTATTCCGAGCTTGTACA+AGG + chr8_2:57007260-57007279 Msa1256730:CDS 40.0%
AGGAATTCCTTGTACAAGCT+CGG - chr8_2:57007270-57007289 None:intergenic 40.0%
!! ATAGAGTTGCTTTGGAAGAG+AGG + chr8_2:57007372-57007391 Msa1256730:CDS 40.0%
AATTGTGACTCAAACTCCAC+AGG - chr8_2:57007482-57007501 None:intergenic 40.0%
CCAGAAGAATTGGTAGACTT+TGG - chr8_2:57007671-57007690 None:intergenic 40.0%
CCAAAGTCTACCAATTCTTC+TGG + chr8_2:57007668-57007687 Msa1256730:CDS 40.0%
GGTAGAATAATCCCAAGTCA+TGG + chr8_2:57007689-57007708 Msa1256730:CDS 40.0%
! GATGATTTTCTCACACTTGC+AGG - chr8_2:57007752-57007771 None:intergenic 40.0%
TTCTATGCACCTATCATCCA+AGG + chr8_2:57007776-57007795 Msa1256730:CDS 40.0%
TTATTTCCTCTTCAGGTCCT+TGG - chr8_2:57007796-57007815 None:intergenic 40.0%
TAAAGCAACAGAAAAGGGTG+TGG + chr8_2:57007826-57007845 Msa1256730:CDS 40.0%
TTGCGCAAGAACTTTAGACA+GGG + chr8_2:57007935-57007954 Msa1256730:CDS 40.0%
! CTTTAAGAAGTCTCTTGCGT+GGG - chr8_2:57007979-57007998 None:intergenic 40.0%
! ACTTTAAGAAGTCTCTTGCG+TGG - chr8_2:57007980-57007999 None:intergenic 40.0%
CGCAAGAGACTTCTTAAAGT+TGG + chr8_2:57007980-57007999 Msa1256730:CDS 40.0%
AACAGATCGAGTGAGCATAG+AGG + chr8_2:57002849-57002868 Msa1256730:CDS 45.0%
GGATGAGACAGAGACAACAA+AGG + chr8_2:57002870-57002889 Msa1256730:CDS 45.0%
GACTCTCTCAATTTGGAAGC+TGG + chr8_2:57002952-57002971 Msa1256730:CDS 45.0%
GCATGAAGACCTTGGAATTG+TGG - chr8_2:57002999-57003018 None:intergenic 45.0%
TTGGAGCGTGACATTGAGTT+TGG + chr8_2:57003137-57003156 Msa1256730:CDS 45.0%
! GTCTTGTGGGCTAATGACAA+TGG + chr8_2:57003327-57003346 Msa1256730:CDS 45.0%
TGGGCTAATGACAATGGCAA+TGG + chr8_2:57003333-57003352 Msa1256730:CDS 45.0%
TTAGAGGGTCACGCTAACAA+AGG - chr8_2:57003981-57004000 None:intergenic 45.0%
ATGGGAACTTCCATGGTCAT+AGG + chr8_2:57004852-57004871 Msa1256730:CDS 45.0%
ACTTCCATGGTCATAGGAGA+CGG + chr8_2:57004858-57004877 Msa1256730:CDS 45.0%
! GGGCATCACTGTAGCAATTT+TGG + chr8_2:57005419-57005438 Msa1256730:CDS 45.0%
AAGGAAGGATGGCTATCACT+AGG + chr8_2:57005624-57005643 Msa1256730:CDS 45.0%
! TGAGGCCATGTTTGCTGATT+TGG + chr8_2:57005760-57005779 Msa1256730:CDS 45.0%
!! GAGGCCATGTTTGCTGATTT+GGG + chr8_2:57005761-57005780 Msa1256730:CDS 45.0%
GTGACCCAAATCAGCAAACA+TGG - chr8_2:57005768-57005787 None:intergenic 45.0%
AGCCACACATTCGTACATTG+GGG - chr8_2:57006454-57006473 None:intergenic 45.0%
CAGCCACACATTCGTACATT+GGG - chr8_2:57006455-57006474 None:intergenic 45.0%
!! GAGGTTTTTGTTTCGGCAAG+TGG + chr8_2:57007391-57007410 Msa1256730:CDS 45.0%
GCGGTTACAATGATACGCTT+GGG + chr8_2:57007453-57007472 Msa1256730:CDS 45.0%
CATGAGACACACCATGACTT+GGG - chr8_2:57007703-57007722 None:intergenic 45.0%
ACATGAGACACACCATGACT+TGG - chr8_2:57007704-57007723 None:intergenic 45.0%
TCTTCAGGTCCTTGGATGAT+AGG - chr8_2:57007788-57007807 None:intergenic 45.0%
TATCATCCAAGGACCTGAAG+AGG + chr8_2:57007787-57007806 Msa1256730:CDS 45.0%
CTTGCGCAAGAACTTTAGAC+AGG + chr8_2:57007934-57007953 Msa1256730:CDS 45.0%
!! TATTCATATTTATTAATAAA+CGG - chr8_2:57006556-57006575 None:intergenic 5.0%
TATGTGTCATGCAGGTGGGT+TGG + chr8_2:57003118-57003137 Msa1256730:intron 50.0%
CTTCCATGGTCATAGGAGAC+GGG + chr8_2:57004859-57004878 Msa1256730:CDS 50.0%
AATCCCGTCTCCTATGACCA+TGG - chr8_2:57004865-57004884 None:intergenic 50.0%
AGCGGGATCAGTACATCACT+GGG + chr8_2:57005050-57005069 Msa1256730:CDS 50.0%
GAAGGATGGCTATCACTAGG+TGG + chr8_2:57005627-57005646 Msa1256730:CDS 50.0%
CTCCCCAATGTACGAATGTG+TGG + chr8_2:57006449-57006468 Msa1256730:intron 50.0%
GCAGCCACACATTCGTACAT+TGG - chr8_2:57006456-57006475 None:intergenic 50.0%
GAATGTGTGGCTGCAAGTTG+TGG + chr8_2:57006462-57006481 Msa1256730:intron 50.0%
TGGTTAACCGCAGAGAAACC+CGG + chr8_2:57006482-57006501 Msa1256730:intron 50.0%
! TAATGGACCGGGTTTCTCTG+CGG - chr8_2:57006492-57006511 None:intergenic 50.0%
! GTACATAGAGTGCCTGGGAT+TGG + chr8_2:57007233-57007252 Msa1256730:CDS 50.0%
TTTCGATGTGTTGCAAGGCG+CGG + chr8_2:57007434-57007453 Msa1256730:CDS 50.0%
CGCGGTTACAATGATACGCT+TGG + chr8_2:57007452-57007471 Msa1256730:CDS 50.0%
TGATACGCTTGGGAATCCTG+TGG + chr8_2:57007463-57007482 Msa1256730:CDS 50.0%
TCTCTTGCGTGGGATTGCAA+TGG - chr8_2:57007969-57007988 None:intergenic 50.0%
GAGCGGGATCAGTACATCAC+TGG + chr8_2:57005049-57005068 Msa1256730:CDS 55.0%
GCAGTCCTTTCTGCGGTGAG+CGG + chr8_2:57005032-57005051 Msa1256730:intron 60.0%
CAGTCCTTTCTGCGGTGAGC+GGG + chr8_2:57005033-57005052 Msa1256730:intron 60.0%
TGATCCCGCTCACCGCAGAA+AGG - chr8_2:57005040-57005059 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 57002835 57008021 57002835 ID=Msa1256730;Name=Msa1256730
chr8_2 mRNA 57002835 57008021 57002835 ID=Msa1256730-mRNA-1;Parent=Msa1256730;Name=Msa1256730-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|1|0.55|1|1|1|9|0|821
chr8_2 exon 57002835 57003008 57002835 ID=Msa1256730-mRNA-1:exon:17557;Parent=Msa1256730-mRNA-1
chr8_2 exon 57003132 57003354 57003132 ID=Msa1256730-mRNA-1:exon:17558;Parent=Msa1256730-mRNA-1
chr8_2 exon 57004655 57004903 57004655 ID=Msa1256730-mRNA-1:exon:17559;Parent=Msa1256730-mRNA-1
chr8_2 exon 57005036 57005077 57005036 ID=Msa1256730-mRNA-1:exon:17560;Parent=Msa1256730-mRNA-1
chr8_2 exon 57005409 57005669 57005409 ID=Msa1256730-mRNA-1:exon:17561;Parent=Msa1256730-mRNA-1
chr8_2 exon 57005756 57005808 57005756 ID=Msa1256730-mRNA-1:exon:17562;Parent=Msa1256730-mRNA-1
chr8_2 exon 57006109 57006223 57006109 ID=Msa1256730-mRNA-1:exon:17563;Parent=Msa1256730-mRNA-1
chr8_2 exon 57006584 57006838 57006584 ID=Msa1256730-mRNA-1:exon:17564;Parent=Msa1256730-mRNA-1
chr8_2 exon 57006928 57008021 57006928 ID=Msa1256730-mRNA-1:exon:17565;Parent=Msa1256730-mRNA-1
chr8_2 CDS 57002835 57003008 57002835 ID=Msa1256730-mRNA-1:cds;Parent=Msa1256730-mRNA-1
chr8_2 CDS 57003132 57003354 57003132 ID=Msa1256730-mRNA-1:cds;Parent=Msa1256730-mRNA-1
chr8_2 CDS 57004655 57004903 57004655 ID=Msa1256730-mRNA-1:cds;Parent=Msa1256730-mRNA-1
chr8_2 CDS 57005036 57005077 57005036 ID=Msa1256730-mRNA-1:cds;Parent=Msa1256730-mRNA-1
chr8_2 CDS 57005409 57005669 57005409 ID=Msa1256730-mRNA-1:cds;Parent=Msa1256730-mRNA-1
chr8_2 CDS 57005756 57005808 57005756 ID=Msa1256730-mRNA-1:cds;Parent=Msa1256730-mRNA-1
chr8_2 CDS 57006109 57006223 57006109 ID=Msa1256730-mRNA-1:cds;Parent=Msa1256730-mRNA-1
chr8_2 CDS 57006584 57006838 57006584 ID=Msa1256730-mRNA-1:cds;Parent=Msa1256730-mRNA-1
chr8_2 CDS 57006928 57008021 57006928 ID=Msa1256730-mRNA-1:cds;Parent=Msa1256730-mRNA-1
Gene Sequence

>Msa1256730

ATGTCTGGAGGAGAAACAGATCGAGTGAGCATAGAGGATGAGACAGAGACAACAAAGGAGATTACAGAGAAGAAGCTGAAAGATAGAAAGGTGTCATGGGCAAAACTACGTCGTGTAGACTCTCTCAATTTGGAAGCTGGAAGAGTTTCTATGAATGCAAACCACAATTCCAAGGTGGGTTGGAGCGTGACATTGAGTTTGGCATTTCAAAGCATAGGAATTGTATATGGTGATATTGGTACATCTCCACTTTATGTGTATGCAAGTACTTTCACTAAAGGAATTAAAGACAACGATGACATTCTTGGAGTATTGTCTCTCATCATCTACACTATTGTGCTTATCCCCATGCTCAAATATGTCTTCATTGTCTTGTGGGCTAATGACAATGGCAATGGTGGAGCGTTTGCACTATATTCGTTGATATGTAGGCATATAAAGATGAGTTTGGCTCCCAATCAACAACCAGAAGACATGGAACTCTCTAATTATAAACTAGAAGTACCATCTAGCAAACAGAAAAGAGCCCATAAACTGAAGCAGAAGCTTGAGAATAGTCATTTTGCGAGAATTATACTTTTGCTTCTAGCTATAATGGGAACTTCCATGGTCATAGGAGACGGGATTCTCACTCCATCTATTTCAGTCCTTTCTGCGGTGAGCGGGATCAGTACATCACTGGGTCAAAATGCTGTTGTGGGCATCACTGTAGCAATTTTGGTTGTCCTATTTTGTATGCAACGATTTGGTACTGATAAAGTGGGAGTCACATTTGCTCCAGTTATTTTAATATGGTTTACATTTATTGGTGGTATTGGTCTCTACAATTTTTTCAAATATGACATTGGAGTATTAAAAGCTTTTAATCCAAAATATATTGTTGATTACTTCAAACGAAATGGTAAGGAAGGATGGCTATCACTAGGTGGAGTCTTTTTATGCATAACAGGATCTGAGGCCATGTTTGCTGATTTGGGTCACTTTAGTGTACGAGCCATTCAAATTAGCTTTTCTTTTGTTACATTTCCTGCAATATTGATAGCATATATTGGGCAAGCAGCATATCTAAGAAAGTTTCCTGAAAACGTGGGGAATACATTCTATGACAGTATACCAGACCCATTGTATTGGCCAACATTTGTTGTGGCTATTGGTGCTGCCATTATAGCTAGTCAAGCAATGATTTCAGGAGCATTTTCCATTATATCACAAGCCCTTAGTCTAGGTTGTTTCCCTAGAGTTAAGGTTGTTCATACTTCAGCTAAGCATCAAGGTCAAGTTTATATTCCAGAGATCAACTACATGTTCTTGATTGGATGTATAGTAGTATGTGTTGCCTTCAAGACCACAGAAAATATCAGTCATGCCTATGGGATTGCTGTTATTGGTGATATGATGATCTCAACAACACTAGTTTCACTTATAATGCTTGTTATATGGAAGAAGAGTTTATGGATGGTCATCCTTTTCTTTTTTGGATTTGGTAGCATAGAGCTTCTTTATTTCTCAGCTCAAATAACCAAGTTCACAAAAGGAGGATATTTTCCAATTGTACTAGCTACGTTCTTGACAATAATTATGGGAATTTGGCATTATGTTCACAAAGAAAGATACATGTTTGAACTCAAGAACAAAGTTTCTACCGAGTATTTGAAGGAATTGGCAAACAACACAAATGTACATAGAGTGCCTGGGATTGGACTTTTGTATTCCGAGCTTGTACAAGGAATTCCTCCAATATTTACGCACTTTATAGCTAGTGTACCATCCATTCATTCAGTTGTTGTGTTCGTTTCTATCAAGACAATTCCAGTTAATAGAGTTGCTTTGGAAGAGAGGTTTTTGTTTCGGCAAGTGGAACCAAGAGAGTATAGAATATTTCGATGTGTTGCAAGGCGCGGTTACAATGATACGCTTGGGAATCCTGTGGAGTTTGAGTCACAATTAATACAAAATCTCAAGGAATTTATTCAACAAGAGAATTTTATGCTTGAGGTTAATGAAGGTGCTGCTACTAATAATGTAACAACTACAACAAGTGAACAATTAGTAGTATCTACTGCCACTAATGAAAATGATCAAATGCAAGATATATCAGGTAAAGAAGTGAAACCAAAGTCTACCAATTCTTCTGGTAGAATAATCCCAAGTCATGGTGTGTCTCATGTATCATCAGATTCAATTAGATCATTGCCTGCAAGTGTGAGAAAATCATCAAATTTCTATGCACCTATCATCCAAGGACCTGAAGAGGAAATAAAATTTATAGATAAAGCAACAGAAAAGGGTGTGGTATATATGATAGGTGAAGCAGAGGTAGTAGCTCACCCAAATTCTTCCATTTTGAATAAGATTGTTGTCAACTATGCTTATAGCTTCTTGCGCAAGAACTTTAGACAGGGAGAAGATTCCATTGCAATCCCACGCAAGAGACTTCTTAAAGTTGGAATGACATATGAAATATGA

Protein sequence

>Msa1256730

MSGGETDRVSIEDETETTKEITEKKLKDRKVSWAKLRRVDSLNLEAGRVSMNANHNSKVGWSVTLSLAFQSIGIVYGDIGTSPLYVYASTFTKGIKDNDDILGVLSLIIYTIVLIPMLKYVFIVLWANDNGNGGAFALYSLICRHIKMSLAPNQQPEDMELSNYKLEVPSSKQKRAHKLKQKLENSHFARIILLLLAIMGTSMVIGDGILTPSISVLSAVSGISTSLGQNAVVGITVAILVVLFCMQRFGTDKVGVTFAPVILIWFTFIGGIGLYNFFKYDIGVLKAFNPKYIVDYFKRNGKEGWLSLGGVFLCITGSEAMFADLGHFSVRAIQISFSFVTFPAILIAYIGQAAYLRKFPENVGNTFYDSIPDPLYWPTFVVAIGAAIIASQAMISGAFSIISQALSLGCFPRVKVVHTSAKHQGQVYIPEINYMFLIGCIVVCVAFKTTENISHAYGIAVIGDMMISTTLVSLIMLVIWKKSLWMVILFFFGFGSIELLYFSAQITKFTKGGYFPIVLATFLTIIMGIWHYVHKERYMFELKNKVSTEYLKELANNTNVHRVPGIGLLYSELVQGIPPIFTHFIASVPSIHSVVVFVSIKTIPVNRVALEERFLFRQVEPREYRIFRCVARRGYNDTLGNPVEFESQLIQNLKEFIQQENFMLEVNEGAATNNVTTTTSEQLVVSTATNENDQMQDISGKEVKPKSTNSSGRIIPSHGVSHVSSDSIRSLPASVRKSSNFYAPIIQGPEEEIKFIDKATEKGVVYMIGEAEVVAHPNSSILNKIVVNYAYSFLRKNFRQGEDSIAIPRKRLLKVGMTYEI*