Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1172230 | XP_013467098.1 | 91.087 | 460 | 23 | 9 | 1 | 455 | 1 | 447 | 0.0 | 832 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1172230 | sp|Q8L627|SRD2_ARATH | 51.020 | 343 | 149 | 7 | 114 | 455 | 51 | 375 | 3.21e-110 | 333 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1172230 | I3S3I2 | 91.087 | 460 | 23 | 9 | 1 | 455 | 1 | 447 | 0.0 | 832 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa1172230 | -0.800886 | 1.167865e-48 | -8.615850e-47 |
| Msa0012040 | Msa1172230 | 0.812709 | 3.698890e-51 | -8.615850e-47 |
| Msa0013050 | Msa1172230 | -0.805938 | 1.048202e-49 | -8.615850e-47 |
| Msa0032610 | Msa1172230 | 0.800553 | 1.365647e-48 | -8.615850e-47 |
| Msa0041970 | Msa1172230 | 0.806343 | 8.614029e-50 | -8.615850e-47 |
| Msa0050720 | Msa1172230 | 0.801640 | 8.186778e-49 | -8.615850e-47 |
| Msa0053900 | Msa1172230 | 0.807618 | 4.627945e-50 | -8.615850e-47 |
| Msa0061150 | Msa1172230 | 0.804172 | 2.454134e-49 | -8.615850e-47 |
| Msa0071240 | Msa1172230 | 0.853537 | 2.238677e-61 | -8.615850e-47 |
| Msa0081230 | Msa1172230 | 0.819797 | 9.616077e-53 | -8.615850e-47 |
| Msa0084940 | Msa1172230 | 0.811550 | 6.619110e-51 | -8.615850e-47 |
| Msa0092990 | Msa1172230 | 0.846908 | 1.616388e-59 | -8.615850e-47 |
| Msa0095380 | Msa1172230 | 0.801678 | 8.041399e-49 | -8.615850e-47 |
| Msa0101710 | Msa1172230 | 0.804178 | 2.446853e-49 | -8.615850e-47 |
| Msa0105700 | Msa1172230 | 0.821954 | 3.068242e-53 | -8.615850e-47 |
| Msa0111310 | Msa1172230 | 0.808333 | 3.260455e-50 | -8.615850e-47 |
| Msa0115270 | Msa1172230 | 0.801618 | 8.271472e-49 | -8.615850e-47 |
| Msa0119850 | Msa1172230 | 0.836043 | 1.179164e-56 | -8.615850e-47 |
| Msa0120340 | Msa1172230 | 0.837409 | 5.288860e-57 | -8.615850e-47 |
| Msa0608710 | Msa1172230 | 0.805922 | 1.056544e-49 | -8.615850e-47 |
| Msa0621590 | Msa1172230 | 0.832575 | 8.741966e-56 | -8.615850e-47 |
| Msa0638070 | Msa1172230 | 0.809385 | 1.942701e-50 | -8.615850e-47 |
| Msa0638280 | Msa1172230 | 0.831003 | 2.134769e-55 | -8.615850e-47 |
| Msa0638320 | Msa1172230 | 0.838427 | 2.893730e-57 | -8.615850e-47 |
| Msa0647450 | Msa1172230 | -0.835129 | 2.008057e-56 | -8.615850e-47 |
| Msa0650190 | Msa1172230 | 0.819009 | 1.454063e-52 | -8.615850e-47 |
| Msa0653490 | Msa1172230 | 0.816045 | 6.768564e-52 | -8.615850e-47 |
| Msa0660300 | Msa1172230 | 0.804215 | 2.403847e-49 | -8.615850e-47 |
| Msa0662650 | Msa1172230 | 0.851479 | 8.642097e-61 | -8.615850e-47 |
| Msa0669850 | Msa1172230 | 0.823437 | 1.386048e-53 | -8.615850e-47 |
| Msa0677270 | Msa1172230 | 0.831499 | 1.612542e-55 | -8.615850e-47 |
| Msa0692110 | Msa1172230 | 0.820494 | 6.660326e-53 | -8.615850e-47 |
| Msa0708860 | Msa1172230 | 0.848276 | 6.795098e-60 | -8.615850e-47 |
| Msa0731180 | Msa1172230 | 0.800492 | 1.405204e-48 | -8.615850e-47 |
| Msa0743260 | Msa1172230 | 0.813790 | 2.141004e-51 | -8.615850e-47 |
| Msa0743720 | Msa1172230 | 0.808007 | 3.826566e-50 | -8.615850e-47 |
| Msa0756310 | Msa1172230 | 0.818633 | 1.770014e-52 | -8.615850e-47 |
| Msa0771720 | Msa1172230 | 0.858273 | 9.224234e-63 | -8.615850e-47 |
| Msa0789270 | Msa1172230 | 0.805051 | 1.608630e-49 | -8.615850e-47 |
| Msa0789280 | Msa1172230 | 0.808189 | 3.500615e-50 | -8.615850e-47 |
| Msa0789290 | Msa1172230 | 0.801895 | 7.256136e-49 | -8.615850e-47 |
| Msa0791100 | Msa1172230 | 0.807461 | 4.998689e-50 | -8.615850e-47 |
| Msa0792090 | Msa1172230 | 0.890850 | 6.783197e-74 | -8.615850e-47 |
| Msa0795080 | Msa1172230 | 0.813928 | 1.996339e-51 | -8.615850e-47 |
| Msa0824680 | Msa1172230 | 0.803652 | 3.147628e-49 | -8.615850e-47 |
| Msa0826190 | Msa1172230 | 0.826571 | 2.522448e-54 | -8.615850e-47 |
| Msa0831590 | Msa1172230 | 0.802743 | 4.854010e-49 | -8.615850e-47 |
| Msa0835730 | Msa1172230 | 0.829142 | 6.072471e-55 | -8.615850e-47 |
| Msa0148360 | Msa1172230 | 0.807680 | 4.491538e-50 | -8.615850e-47 |
| Msa0152170 | Msa1172230 | 0.831921 | 1.269173e-55 | -8.615850e-47 |
| Msa0162770 | Msa1172230 | -0.802291 | 6.016007e-49 | -8.615850e-47 |
| Msa0178990 | Msa1172230 | 0.806900 | 6.571891e-50 | -8.615850e-47 |
| Msa0185640 | Msa1172230 | -0.801869 | 7.346275e-49 | -8.615850e-47 |
| Msa0220440 | Msa1172230 | 0.809430 | 1.899921e-50 | -8.615850e-47 |
| Msa0223290 | Msa1172230 | 0.800349 | 1.502456e-48 | -8.615850e-47 |
| Msa0223380 | Msa1172230 | 0.822540 | 2.243425e-53 | -8.615850e-47 |
| Msa0226890 | Msa1172230 | 0.818410 | 1.989122e-52 | -8.615850e-47 |
| Msa0233610 | Msa1172230 | 0.802475 | 5.511903e-49 | -8.615850e-47 |
| Msa0365490 | Msa1172230 | 0.809436 | 1.893581e-50 | -8.615850e-47 |
| Msa0376590 | Msa1172230 | 0.806741 | 7.098644e-50 | -8.615850e-47 |
| Msa0380040 | Msa1172230 | 0.807630 | 4.602948e-50 | -8.615850e-47 |
| Msa0387010 | Msa1172230 | 0.801133 | 1.039472e-48 | -8.615850e-47 |
| Msa0389810 | Msa1172230 | 0.839993 | 1.136470e-57 | -8.615850e-47 |
| Msa0404030 | Msa1172230 | 0.822679 | 2.082286e-53 | -8.615850e-47 |
| Msa0406880 | Msa1172230 | 0.809048 | 2.294291e-50 | -8.615850e-47 |
| Msa0419620 | Msa1172230 | -0.809502 | 1.833496e-50 | -8.615850e-47 |
| Msa0421780 | Msa1172230 | -0.808102 | 3.651492e-50 | -8.615850e-47 |
| Msa0431670 | Msa1172230 | 0.801012 | 1.100351e-48 | -8.615850e-47 |
| Msa0433530 | Msa1172230 | 0.800907 | 1.156507e-48 | -8.615850e-47 |
| Msa0442850 | Msa1172230 | 0.834483 | 2.919540e-56 | -8.615850e-47 |
| Msa0443920 | Msa1172230 | 0.803949 | 2.731012e-49 | -8.615850e-47 |
| Msa0465680 | Msa1172230 | -0.802051 | 6.740157e-49 | -8.615850e-47 |
| Msa0466390 | Msa1172230 | 0.815181 | 1.054300e-51 | -8.615850e-47 |
| Msa0467900 | Msa1172230 | -0.811359 | 7.283726e-51 | -8.615850e-47 |
| Msa0467960 | Msa1172230 | -0.805898 | 1.068528e-49 | -8.615850e-47 |
| Msa0468130 | Msa1172230 | 0.842210 | 2.972433e-58 | -8.615850e-47 |
| Msa0473240 | Msa1172230 | 0.818673 | 1.733561e-52 | -8.615850e-47 |
| Msa0475580 | Msa1172230 | 0.803099 | 4.096890e-49 | -8.615850e-47 |
| Msa0477260 | Msa1172230 | 0.802282 | 6.041202e-49 | -8.615850e-47 |
| Msa0480320 | Msa1172230 | 0.812408 | 4.303978e-51 | -8.615850e-47 |
| Msa0482680 | Msa1172230 | 0.804088 | 2.554866e-49 | -8.615850e-47 |
| Msa0982270 | Msa1172230 | 0.847923 | 8.504638e-60 | -8.615850e-47 |
| Msa0992490 | Msa1172230 | -0.834876 | 2.325837e-56 | -8.615850e-47 |
| Msa0993530 | Msa1172230 | 0.828924 | 6.859836e-55 | -8.615850e-47 |
| Msa0999040 | Msa1172230 | 0.812537 | 4.033474e-51 | -8.615850e-47 |
| Msa1002480 | Msa1172230 | 0.807751 | 4.337107e-50 | -8.615850e-47 |
| Msa1012830 | Msa1172230 | 0.805966 | 1.034356e-49 | -8.615850e-47 |
| Msa1021340 | Msa1172230 | 0.811102 | 8.282557e-51 | -8.615850e-47 |
| Msa1026760 | Msa1172230 | 0.802441 | 5.603237e-49 | -8.615850e-47 |
| Msa1026790 | Msa1172230 | 0.802466 | 5.536665e-49 | -8.615850e-47 |
| Msa1037700 | Msa1172230 | -0.816285 | 5.983013e-52 | -8.615850e-47 |
| Msa1039880 | Msa1172230 | 0.842611 | 2.326513e-58 | -8.615850e-47 |
| Msa1072460 | Msa1172230 | -0.824584 | 7.456030e-54 | -8.615850e-47 |
| Msa1075220 | Msa1172230 | -0.800735 | 1.253851e-48 | -8.615850e-47 |
| Msa1082500 | Msa1172230 | 0.806650 | 7.421595e-50 | -8.615850e-47 |
| Msa1085920 | Msa1172230 | 0.816388 | 5.673053e-52 | -8.615850e-47 |
| Msa1090260 | Msa1172230 | 0.815366 | 9.591749e-52 | -8.615850e-47 |
| Msa1092090 | Msa1172230 | 0.824087 | 9.758275e-54 | -8.615850e-47 |
| Msa0258760 | Msa1172230 | 0.800959 | 1.128300e-48 | -8.615850e-47 |
| Msa0269280 | Msa1172230 | 0.866809 | 2.173719e-65 | -8.615850e-47 |
| Msa0269450 | Msa1172230 | 0.854372 | 1.286348e-61 | -8.615850e-47 |
| Msa0288240 | Msa1172230 | 0.806987 | 6.297633e-50 | -8.615850e-47 |
| Msa0288330 | Msa1172230 | 0.801242 | 9.877652e-49 | -8.615850e-47 |
| Msa0296160 | Msa1172230 | 0.806713 | 7.198055e-50 | -8.615850e-47 |
| Msa0299580 | Msa1172230 | 0.808899 | 2.468842e-50 | -8.615850e-47 |
| Msa0304290 | Msa1172230 | 0.801973 | 6.993920e-49 | -8.615850e-47 |
| Msa0304330 | Msa1172230 | 0.802429 | 5.633452e-49 | -8.615850e-47 |
| Msa0305890 | Msa1172230 | 0.801315 | 9.540531e-49 | -8.615850e-47 |
| Msa0323080 | Msa1172230 | 0.821597 | 3.709308e-53 | -8.615850e-47 |
| Msa0326670 | Msa1172230 | 0.825523 | 4.476014e-54 | -8.615850e-47 |
| Msa0334570 | Msa1172230 | 0.805084 | 1.583715e-49 | -8.615850e-47 |
| Msa0340810 | Msa1172230 | 0.802980 | 4.337040e-49 | -8.615850e-47 |
| Msa0342340 | Msa1172230 | -0.802617 | 5.153332e-49 | -8.615850e-47 |
| Msa0344830 | Msa1172230 | 0.842889 | 1.962339e-58 | -8.615850e-47 |
| Msa0350990 | Msa1172230 | 0.834903 | 2.289078e-56 | -8.615850e-47 |
| Msa0351030 | Msa1172230 | 0.833255 | 5.924773e-56 | -8.615850e-47 |
| Msa0351080 | Msa1172230 | 0.807003 | 6.250137e-50 | -8.615850e-47 |
| Msa0351100 | Msa1172230 | 0.811160 | 8.044667e-51 | -8.615850e-47 |
| Msa1116690 | Msa1172230 | 0.816757 | 4.691237e-52 | -8.615850e-47 |
| Msa1130210 | Msa1172230 | -0.819622 | 1.054342e-52 | -8.615850e-47 |
| Msa1137600 | Msa1172230 | 0.810447 | 1.147606e-50 | -8.615850e-47 |
| Msa1143930 | Msa1172230 | -0.826715 | 2.329507e-54 | -8.615850e-47 |
| Msa1162550 | Msa1172230 | -0.805300 | 1.426678e-49 | -8.615850e-47 |
| Msa1171870 | Msa1172230 | 0.837535 | 4.908286e-57 | -8.615850e-47 |
| Msa1172230 | Msa1187520 | 0.810190 | 1.303813e-50 | -8.615850e-47 |
| Msa1172230 | Msa1199560 | 0.831043 | 2.087662e-55 | -8.615850e-47 |
| Msa1172230 | Msa1199620 | 0.800239 | 1.581966e-48 | -8.615850e-47 |
| Msa1172230 | Msa1204980 | -0.808701 | 2.720953e-50 | -8.615850e-47 |
| Msa1172230 | Msa1205010 | -0.817732 | 2.831406e-52 | -8.615850e-47 |
| Msa1172230 | Msa1206020 | 0.823149 | 1.618083e-53 | -8.615850e-47 |
| Msa1172230 | Msa1217430 | -0.827522 | 1.493482e-54 | -8.615850e-47 |
| Msa1172230 | Msa1217810 | 0.823894 | 1.083261e-53 | -8.615850e-47 |
| Msa1172230 | Msa1217830 | 0.836953 | 6.916994e-57 | -8.615850e-47 |
| Msa1172230 | Msa1217860 | 0.825355 | 4.904021e-54 | -8.615850e-47 |
| Msa1172230 | Msa1233500 | 0.850891 | 1.266466e-60 | -8.615850e-47 |
| Msa1172230 | Msa1233890 | 0.825723 | 4.011664e-54 | -8.615850e-47 |
| Msa1172230 | Msa1247250 | 0.805857 | 1.090105e-49 | -8.615850e-47 |
| Msa1172230 | Msa1267260 | 0.921725 | 2.473605e-88 | -8.615850e-47 |
| Msa1172230 | Msa1271200 | 0.801427 | 9.050940e-49 | -8.615850e-47 |
| Msa1172230 | Msa1271210 | 0.803951 | 2.728262e-49 | -8.615850e-47 |
| Msa1172230 | Msa1275770 | 0.802556 | 5.305760e-49 | -8.615850e-47 |
| Msa1172230 | Msa1276440 | 0.822405 | 2.411408e-53 | -8.615850e-47 |
| Msa1172230 | Msa1279210 | 0.853255 | 2.697223e-61 | -8.615850e-47 |
| Msa1172230 | Msa1280130 | 0.807165 | 5.774906e-50 | -8.615850e-47 |
| Msa1172230 | Msa1282920 | 0.820947 | 5.240529e-53 | -8.615850e-47 |
| Msa1172230 | Msa1297090 | 0.820273 | 7.483291e-53 | -8.615850e-47 |
| Msa1172230 | Msa1300350 | -0.811414 | 7.086932e-51 | -8.615850e-47 |
| Msa1172230 | Msa1302190 | -0.829797 | 4.210903e-55 | -8.615850e-47 |
| Msa1172230 | Msa1303160 | 0.804541 | 2.056003e-49 | -8.615850e-47 |
| Msa1172230 | Msa1306430 | 0.833429 | 5.359118e-56 | -8.615850e-47 |
| Msa1172230 | Msa1306750 | 0.819240 | 1.288645e-52 | -8.615850e-47 |
| Msa1172230 | Msa1307740 | 0.838334 | 3.059044e-57 | -8.615850e-47 |
| Msa1172230 | Msa1322190 | 0.835884 | 1.293721e-56 | -8.615850e-47 |
| Msa1172230 | Msa1328700 | 0.838264 | 3.188699e-57 | -8.615850e-47 |
| Msa1172230 | Msa1328850 | 0.821063 | 4.926787e-53 | -8.615850e-47 |
| Msa1172230 | Msa1348950 | 0.831259 | 1.847166e-55 | -8.615850e-47 |
| Msa1172230 | Msa1362880 | 0.800612 | 1.328208e-48 | -8.615850e-47 |
| Msa1172230 | Msa1369530 | 0.833563 | 4.963253e-56 | -8.615850e-47 |
| Msa1172230 | Msa1416390 | 0.831032 | 2.100334e-55 | -8.615850e-47 |
| Msa1172230 | Msa1423450 | 0.807045 | 6.122292e-50 | -8.615850e-47 |
| Msa1172230 | Msa1427830 | 0.812549 | 4.010110e-51 | -8.615850e-47 |
| Msa1172230 | Msa1439960 | 0.824536 | 7.652021e-54 | -8.615850e-47 |
| Msa1172230 | Msa1440000 | 0.826699 | 2.350364e-54 | -8.615850e-47 |
| Msa1172230 | Msa1440610 | 0.806156 | 9.431803e-50 | -8.615850e-47 |
| Msa1172230 | Msa1441190 | 0.914773 | 1.292067e-84 | -8.615850e-47 |
| Msa1172230 | Msa1444740 | 0.801806 | 7.568299e-49 | -8.615850e-47 |
| Msa1172230 | Msa1451620 | -0.827615 | 1.418996e-54 | -8.615850e-47 |
| Msa1172230 | Msa1452470 | 0.812942 | 3.288853e-51 | -8.615850e-47 |
| Msa1172230 | Msa1454110 | 0.811699 | 6.143456e-51 | -8.615850e-47 |
| Msa1172230 | Msa1461250 | -0.802766 | 4.800550e-49 | -8.615850e-47 |
| Msa1172230 | Msa1465960 | 0.805273 | 1.445747e-49 | -8.615850e-47 |
| Msa0491520 | Msa1172230 | 0.803856 | 2.854486e-49 | -8.615850e-47 |
| Msa0511720 | Msa1172230 | -0.823853 | 1.107329e-53 | -8.615850e-47 |
| Msa0516370 | Msa1172230 | 0.802391 | 5.737581e-49 | -8.615850e-47 |
| Msa0535030 | Msa1172230 | 0.816578 | 5.144545e-52 | -8.615850e-47 |
| Msa0535060 | Msa1172230 | 0.821688 | 3.533944e-53 | -8.615850e-47 |
| Msa0540070 | Msa1172230 | 0.800837 | 1.194797e-48 | -8.615850e-47 |
| Msa0553220 | Msa1172230 | -0.829096 | 6.230324e-55 | -8.615850e-47 |
| Msa0553460 | Msa1172230 | 0.809230 | 2.096485e-50 | -8.615850e-47 |
| Msa0562440 | Msa1172230 | 0.828976 | 6.663864e-55 | -8.615850e-47 |
| Msa0575470 | Msa1172230 | 0.800184 | 1.623227e-48 | -8.615850e-47 |
| Msa0585900 | Msa1172230 | 0.810628 | 1.048874e-50 | -8.615850e-47 |
| Msa0591060 | Msa1172230 | 0.813474 | 2.513820e-51 | -8.615850e-47 |
| Msa0591770 | Msa1172230 | 0.807845 | 4.142561e-50 | -8.615850e-47 |
| Msa0598460 | Msa1172230 | 0.825803 | 3.840634e-54 | -8.615850e-47 |
| Msa0599580 | Msa1172230 | 0.839622 | 1.419626e-57 | -8.615850e-47 |
| Msa0855430 | Msa1172230 | 0.826053 | 3.349181e-54 | -8.615850e-47 |
| Msa0870150 | Msa1172230 | 0.809300 | 2.025443e-50 | -8.615850e-47 |
| Msa0876580 | Msa1172230 | 0.809176 | 2.153284e-50 | -8.615850e-47 |
| Msa0877410 | Msa1172230 | 0.830125 | 3.502265e-55 | -8.615850e-47 |
| Msa0881020 | Msa1172230 | 0.826911 | 2.091626e-54 | -8.615850e-47 |
| Msa0881030 | Msa1172230 | 0.819167 | 1.338510e-52 | -8.615850e-47 |
| Msa0899230 | Msa1172230 | 0.813051 | 3.112740e-51 | -8.615850e-47 |
| Msa0910980 | Msa1172230 | -0.819015 | 1.449754e-52 | -8.615850e-47 |
| Msa0927670 | Msa1172230 | 0.820788 | 5.700567e-53 | -8.615850e-47 |
| Msa0930460 | Msa1172230 | -0.820082 | 8.277437e-53 | -8.615850e-47 |
| Msa0935850 | Msa1172230 | 0.802169 | 6.374573e-49 | -8.615850e-47 |
| Msa0944550 | Msa1172230 | 0.802897 | 4.510664e-49 | -8.615850e-47 |
| Msa0944770 | Msa1172230 | 0.810668 | 1.028118e-50 | -8.615850e-47 |
| Msa0959010 | Msa1172230 | 0.815106 | 1.095486e-51 | -8.615850e-47 |
| Msa0960160 | Msa1172230 | 0.815887 | 7.341120e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1172230 | MtrunA17_Chr1g0167641 | 91.087 | 460 | 23 | 9 | 1 | 455 | 1 | 447 | 0.0 | 832 |
| Msa1172230 | MtrunA17_Chr4g0076621 | 88.596 | 456 | 33 | 7 | 1 | 455 | 1 | 438 | 0.0 | 812 |
| Msa1172230 | MtrunA17_Chr4g0031761 | 82.072 | 251 | 22 | 10 | 1 | 241 | 1 | 238 | 2.62e-127 | 368 |
| Msa1172230 | MtrunA17_Chr8g0354941 | 71.429 | 231 | 43 | 3 | 131 | 361 | 14 | 221 | 2.58e-112 | 330 |
| Msa1172230 | MtrunA17_Chr4g0031751 | 94.545 | 110 | 6 | 0 | 259 | 368 | 1 | 110 | 1.42e-72 | 224 |
| Msa1172230 | MtrunA17_Chr8g0354951 | 86.316 | 95 | 13 | 0 | 361 | 455 | 2 | 96 | 5.00e-58 | 186 |
| Msa1172230 | MtrunA17_Chr8g0354931 | 52.525 | 99 | 36 | 4 | 17 | 107 | 8 | 103 | 7.66e-18 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1172230 | AT1G28560.3 | 46.696 | 454 | 208 | 10 | 23 | 455 | 22 | 462 | 8.08e-128 | 379 |
| Msa1172230 | AT1G28560.1 | 51.020 | 343 | 149 | 7 | 114 | 455 | 51 | 375 | 3.26e-111 | 333 |
| Msa1172230 | AT1G28560.2 | 51.020 | 343 | 149 | 7 | 114 | 455 | 62 | 386 | 4.97e-111 | 333 |
Find 122 sgRNAs with CRISPR-Local
Find 333 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGCTGCAACACGTATTT+TGG | 0.102161 | 8_1:+2090741 | Msa1172230:three_prime_UTR |
| AAATGGGAATATATTATAAA+TGG | 0.182807 | 8_1:+2088743 | Msa1172230:CDS |
| GAAACAACAACAAGTCTTTC+AGG | 0.206736 | 8_1:+2087631 | Msa1172230:CDS |
| GAAGAGATGAGTGACGTTTA+AGG | 0.225559 | 8_1:-2086983 | None:intergenic |
| AGACATATTGGAAACGTAAA+TGG | 0.239480 | 8_1:-2087453 | None:intergenic |
| ATATGTCTGGCCCAATTGTT+AGG | 0.268431 | 8_1:+2087468 | Msa1172230:CDS |
| CTTCTGCCGATTGCCGATAA+AGG | 0.311277 | 8_1:-2087332 | None:intergenic |
| CGATGAATTGGAATTGGAAT+TGG | 0.317249 | 8_1:+2087379 | Msa1172230:CDS |
| AACAATTGGGCCAGACATAT+TGG | 0.330843 | 8_1:-2087465 | None:intergenic |
| GGTCAACACAATGGCTCTTC+AGG | 0.336128 | 8_1:+2088227 | Msa1172230:intron |
| ACCCAAGAGCTGTTAGTTCT+TGG | 0.341773 | 8_1:+2088449 | Msa1172230:CDS |
| CTTGCTTTAGTCCTGATTCC+AGG | 0.346091 | 8_1:+2088034 | Msa1172230:intron |
| TCAAAGCCATGTCCATTAAC+TGG | 0.348465 | 8_1:-2087610 | None:intergenic |
| AATAATGGATGACGATGAAT+TGG | 0.349436 | 8_1:+2087367 | Msa1172230:exon |
| TTGGAATTGGAATGTTCAAT+TGG | 0.350971 | 8_1:+2087392 | Msa1172230:CDS |
| AATGGGAATATATTATAAAT+GGG | 0.355592 | 8_1:+2088744 | Msa1172230:CDS |
| TTTCTTCTGTGCCTCCTCCT+TGG | 0.362628 | 8_1:-2088723 | None:intergenic |
| ATGCCGATGATGTACAGAAT+TGG | 0.370973 | 8_1:+2090403 | Msa1172230:CDS |
| TTCAGTTGAAAAGTGACAAT+TGG | 0.371285 | 8_1:-2090435 | None:intergenic |
| AAGAGAAGAAACAAGAATAA+TGG | 0.377711 | 8_1:+2087352 | Msa1172230:exon |
| CTCAAAGGATGATGTCTCTT+AGG | 0.383507 | 8_1:+2088094 | Msa1172230:CDS |
| AACTCTGCTGCTGCAGCATT+AGG | 0.385029 | 8_1:-2087683 | None:intergenic |
| GCTGGCCAACATGACCCTTC+TGG | 0.386308 | 8_1:+2088536 | Msa1172230:CDS |
| AGGAGGAGGCACAGAAGAAA+TGG | 0.394153 | 8_1:+2088726 | Msa1172230:CDS |
| TTTACAATTACTATCAAGAA+TGG | 0.394641 | 8_1:-2087850 | None:intergenic |
| TGATTAATTGTTGTTAGTCT+TGG | 0.401698 | 8_1:+2090635 | Msa1172230:exon |
| GGATGACGATGAATTGGAAT+TGG | 0.402520 | 8_1:+2087373 | Msa1172230:CDS |
| CACCAAGAACTAACAGCTCT+TGG | 0.403372 | 8_1:-2088451 | None:intergenic |
| AAAAGAGGAACCCTAACAAT+TGG | 0.405666 | 8_1:-2087479 | None:intergenic |
| GATTGATTGATCCTGGAATC+AGG | 0.410653 | 8_1:-2088045 | None:intergenic |
| GTCAGAATAACAAGCTCTTC+AGG | 0.418838 | 8_1:+2087802 | Msa1172230:CDS |
| TCTTAATCATTGAACCGGTT+CGG | 0.426362 | 8_1:+2087163 | Msa1172230:five_prime_UTR |
| CTGAACTGCTCGCTCAAAAC+CGG | 0.432643 | 8_1:-2087217 | None:intergenic |
| TTTCTTCTTAATCATTGAAC+CGG | 0.438377 | 8_1:+2087158 | Msa1172230:five_prime_UTR |
| TGATAGTAATTGTAAAGAAA+AGG | 0.442398 | 8_1:+2087857 | Msa1172230:CDS |
| TCATGATCATGATTCGAATC+AGG | 0.447002 | 8_1:-2087551 | None:intergenic |
| TGGATACCTTTATTGTCATC+AGG | 0.448523 | 8_1:+2088886 | Msa1172230:CDS |
| AAACAACAACAAGTCTTTCA+GGG | 0.453600 | 8_1:+2087632 | Msa1172230:CDS |
| AATCAGGAGGTAATTCAGAT+TGG | 0.455691 | 8_1:-2087535 | None:intergenic |
| ATTTACGTTTCCAATATGTC+TGG | 0.458225 | 8_1:+2087455 | Msa1172230:CDS |
| CCAGAACTTATCTGTATTGA+GGG | 0.458583 | 8_1:+2088475 | Msa1172230:CDS |
| TATCTCGTATTACTAAGGTA+TGG | 0.460471 | 8_1:-2090368 | None:intergenic |
| AAAGTACCTGATGACAATAA+AGG | 0.462826 | 8_1:-2088892 | None:intergenic |
| CCCTCAATACAGATAAGTTC+TGG | 0.465397 | 8_1:-2088475 | None:intergenic |
| CATCCTCTGCTAGGTGAAGA+AGG | 0.470985 | 8_1:-2090569 | None:intergenic |
| GTTGGCAGATTGATTGATCC+TGG | 0.476704 | 8_1:-2088052 | None:intergenic |
| TTAATTGTTGTTAGTCTTGG+AGG | 0.477720 | 8_1:+2090638 | Msa1172230:exon |
| AGGTCACTGTGGATGACAAA+TGG | 0.479331 | 8_1:+2090505 | Msa1172230:CDS |
| AACCTTTGTGGCAGAACTTG+TGG | 0.482472 | 8_1:-2088118 | None:intergenic |
| GAGCGAGCAGTTCAGGTTCA+CGG | 0.484567 | 8_1:+2087225 | Msa1172230:five_prime_UTR |
| TTTCAAAACCACCGAGTCGC+CGG | 0.485356 | 8_1:+2087188 | Msa1172230:five_prime_UTR |
| TTACAATTACTATCAAGAAT+GGG | 0.489599 | 8_1:-2087849 | None:intergenic |
| CTTCTTCACCTAGCAGAGGA+TGG | 0.493676 | 8_1:+2090570 | Msa1172230:CDS |
| GACATATTGGAAACGTAAAT+GGG | 0.495516 | 8_1:-2087452 | None:intergenic |
| AGTCTTGGAGGGACACCTAC+TGG | 0.499999 | 8_1:+2090650 | Msa1172230:three_prime_UTR |
| CCTCATATCTCGTATTACTA+AGG | 0.501935 | 8_1:-2090373 | None:intergenic |
| CAAGAGCTGTTAGTTCTTGG+TGG | 0.503983 | 8_1:+2088452 | Msa1172230:CDS |
| TGCCGATGATGTACAGAATT+GGG | 0.506290 | 8_1:+2090404 | Msa1172230:CDS |
| AATGGGTTTATTTGTTCGAC+GGG | 0.510441 | 8_1:-2087832 | None:intergenic |
| GCCAGAACTTATCTGTATTG+AGG | 0.512945 | 8_1:+2088474 | Msa1172230:CDS |
| ACCAAGAACTAACAGCTCTT+GGG | 0.513479 | 8_1:-2088450 | None:intergenic |
| TGATGTAGTCTACATGCTCT+AGG | 0.515069 | 8_1:-2090913 | None:intergenic |
| AAAGAGGAACCCTAACAATT+GGG | 0.516740 | 8_1:-2087478 | None:intergenic |
| CCCCTCGGAATTGAGATTGA+AGG | 0.518085 | 8_1:-2087425 | None:intergenic |
| AAGCCAATCGAGTATGGGTC+TGG | 0.519776 | 8_1:-2088693 | None:intergenic |
| TAAAAGTATTAACCAGGTAG+AGG | 0.520925 | 8_1:+2087257 | Msa1172230:five_prime_UTR |
| TTCCCTTCTTCACCTAGCAG+AGG | 0.521159 | 8_1:+2090566 | Msa1172230:CDS |
| TATGTCTGGCCCAATTGTTA+GGG | 0.523102 | 8_1:+2087469 | Msa1172230:CDS |
| CCTTAGTAATACGAGATATG+AGG | 0.530354 | 8_1:+2090373 | Msa1172230:CDS |
| TAATTTGAAAAGCATTTCGT+GGG | 0.531230 | 8_1:+2090769 | Msa1172230:three_prime_UTR |
| TCAGGAGCACATACCTGTGC+AGG | 0.532269 | 8_1:+2088245 | Msa1172230:CDS |
| AAATAATAATACAAATAAAG+AGG | 0.532711 | 8_1:-2090980 | None:intergenic |
| ATAATTTGAAAAGCATTTCG+TGG | 0.534982 | 8_1:+2090768 | Msa1172230:three_prime_UTR |
| TGACCAGACCCATACTCGAT+TGG | 0.536263 | 8_1:+2088690 | Msa1172230:CDS |
| ACACAAGCAGGAGGAAGATA+AGG | 0.539279 | 8_1:+2087902 | Msa1172230:CDS |
| ATCTCGTATTACTAAGGTAT+GGG | 0.540723 | 8_1:-2090367 | None:intergenic |
| AGACTAACAACAATTAATCA+TGG | 0.540971 | 8_1:-2090632 | None:intergenic |
| TAATTGTTGTTAGTCTTGGA+GGG | 0.546279 | 8_1:+2090639 | Msa1172230:exon |
| TTGTAAAGAAAAGGTGGAGG+AGG | 0.547523 | 8_1:+2087866 | Msa1172230:CDS |
| GAATGGGTTTATTTGTTCGA+CGG | 0.551185 | 8_1:-2087833 | None:intergenic |
| GGAGGAGGCACAGAAGAAAT+GGG | 0.551959 | 8_1:+2088727 | Msa1172230:CDS |
| CAAAATATTCAGAGCTACAA+AGG | 0.552654 | 8_1:+2090485 | Msa1172230:CDS |
| GATCAATTGCTCAACGGACC+AGG | 0.552708 | 8_1:+2088502 | Msa1172230:CDS |
| ACGTAAATGGGTCCACCCCT+CGG | 0.554400 | 8_1:-2087440 | None:intergenic |
| AGAATTTAGGAGAACCTTTG+TGG | 0.559405 | 8_1:-2088130 | None:intergenic |
| CAATGATTAAGAAGAAAGAA+AGG | 0.562252 | 8_1:-2087152 | None:intergenic |
| ATGGAGAGCCATCCTCTGCT+AGG | 0.564427 | 8_1:-2090578 | None:intergenic |
| TAGTAATTGTAAAGAAAAGG+TGG | 0.567221 | 8_1:+2087860 | Msa1172230:CDS |
| CTGGTCAAATCAATAGCAGA+TGG | 0.567575 | 8_1:-2088674 | None:intergenic |
| TGTCAGAATCAAACACAAGC+AGG | 0.569616 | 8_1:+2087890 | Msa1172230:CDS |
| TCCTTCAATCTCAATTCCGA+GGG | 0.576834 | 8_1:+2087424 | Msa1172230:CDS |
| TCAATCTCAATTCCGAGGGG+TGG | 0.580163 | 8_1:+2087428 | Msa1172230:CDS |
| GTAGTCTACATGCTCTAGGA+AGG | 0.581362 | 8_1:-2090909 | None:intergenic |
| CAAAATCAATCAAAACTCAA+AGG | 0.581709 | 8_1:+2088079 | Msa1172230:CDS |
| TCAATTAGAAAATAACCAGA+AGG | 0.582127 | 8_1:-2088551 | None:intergenic |
| TCTGCTGCTGCAGCATTAGG+AGG | 0.582300 | 8_1:-2087680 | None:intergenic |
| ATGGGAATATATTATAAATG+GGG | 0.585026 | 8_1:+2088745 | Msa1172230:CDS |
| AGCCCAATTCTGTACATCAT+CGG | 0.585350 | 8_1:-2090406 | None:intergenic |
| ATCCTTCAATCTCAATTCCG+AGG | 0.585910 | 8_1:+2087423 | Msa1172230:CDS |
| TATAGTGTGACTATAAGCGC+TGG | 0.590005 | 8_1:-2090800 | None:intergenic |
| AATAACCAGAAGGGTCATGT+TGG | 0.592815 | 8_1:-2088541 | None:intergenic |
| ATAATCATATTCTATGAAGT+CGG | 0.597290 | 8_1:-2090607 | None:intergenic |
| ATCCTCTGCTAGGTGAAGAA+GGG | 0.601005 | 8_1:-2090568 | None:intergenic |
| ACAACTTCTGAATCCTGCAC+AGG | 0.605667 | 8_1:-2088258 | None:intergenic |
| GCTTCAAAACTCCAAGGAGG+AGG | 0.606372 | 8_1:+2088712 | Msa1172230:CDS |
| GTCCACAAGTTCTGCCACAA+AGG | 0.606734 | 8_1:+2088116 | Msa1172230:CDS |
| TCGAAATAAAACATGACACA+TGG | 0.615236 | 8_1:+2087297 | Msa1172230:five_prime_UTR |
| GTTTCAACTCTACCTCTACC+TGG | 0.618474 | 8_1:-2087269 | None:intergenic |
| CGATTGGCTTCAAAACTCCA+AGG | 0.623497 | 8_1:+2088706 | Msa1172230:CDS |
| TGAGGACCAGTTAATGGACA+TGG | 0.631627 | 8_1:+2087604 | Msa1172230:CDS |
| TAATTGTAAAGAAAAGGTGG+AGG | 0.637738 | 8_1:+2087863 | Msa1172230:CDS |
| TCTATGAAGTCGGTATACGA+TGG | 0.646588 | 8_1:-2090597 | None:intergenic |
| TGTTTCACAGGTCAACACAA+TGG | 0.647779 | 8_1:+2088218 | Msa1172230:intron |
| TGATCATGATTCGAATCAGG+AGG | 0.661526 | 8_1:-2087548 | None:intergenic |
| ATCTCAAAAGATGCAAAACG+AGG | 0.663023 | 8_1:-2088821 | None:intergenic |
| AAAACAAAAGGCAATTGTCG+GGG | 0.664942 | 8_1:+2088778 | Msa1172230:CDS |
| CAGAATCAAACACAAGCAGG+AGG | 0.676879 | 8_1:+2087893 | Msa1172230:CDS |
| CAATTAGAAAATAACCAGAA+GGG | 0.677062 | 8_1:-2088550 | None:intergenic |
| GGACAAGATCAATTGCTCAA+CGG | 0.684391 | 8_1:+2088496 | Msa1172230:CDS |
| CAGAGCTACAAAGGTCACTG+TGG | 0.721614 | 8_1:+2090494 | Msa1172230:CDS |
| CCTTCAATCTCAATTCCGAG+GGG | 0.754073 | 8_1:+2087425 | Msa1172230:CDS |
| TTGGCTTCAAAACTCCAAGG+AGG | 0.756414 | 8_1:+2088709 | Msa1172230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAATAATGAAAAAAGA+GGG | - | chr8_1:2087723-2087742 | None:intergenic | 10.0% |
| !! | AATAATAATAATGAAAAAAG+AGG | - | chr8_1:2087724-2087743 | None:intergenic | 10.0% |
| !!! | AATTATTATTTTGATTATGT+AGG | - | chr8_1:2088363-2088382 | None:intergenic | 10.0% |
| !! | AAAGCAAAAAATTAAAAAAA+TGG | - | chr8_1:2088959-2088978 | None:intergenic | 10.0% |
| !!! | TTAATTTTTTGCTTTAAATT+TGG | + | chr8_1:2088964-2088983 | Msa1172230:intron | 10.0% |
| !!! | TCTTTATTTTTCTTTAATTT+TGG | + | chr8_1:2089439-2089458 | Msa1172230:intron | 10.0% |
| !!! | CTTTATTTTTCTTTAATTTT+GGG | + | chr8_1:2089440-2089459 | Msa1172230:intron | 10.0% |
| !!! | TTTATTTTTCTTTAATTTTG+GGG | + | chr8_1:2089441-2089460 | Msa1172230:intron | 10.0% |
| !! | TAAGAAAACAATTATAAATT+TGG | - | chr8_1:2090294-2090313 | None:intergenic | 10.0% |
| !! | AAATAATAATACAAATAAAG+AGG | - | chr8_1:2090983-2091002 | None:intergenic | 10.0% |
| !! | AAAAAAAAACAGAATTTAGA+AGG | - | chr8_1:2087132-2087151 | None:intergenic | 15.0% |
| !!! | GATAAAATATTTTCCTTTAT+CGG | + | chr8_1:2087319-2087338 | Msa1172230:five_prime_UTR | 15.0% |
| !!! | TTTTCTTTTTCTTTTTCTTT+TGG | + | chr8_1:2088422-2088441 | Msa1172230:intron | 15.0% |
| !!! | TTTCTTTTTCTTTTTCTTTT+GGG | + | chr8_1:2088423-2088442 | Msa1172230:intron | 15.0% |
| !! | AAATGGGAATATATTATAAA+TGG | + | chr8_1:2088743-2088762 | Msa1172230:CDS | 15.0% |
| !! | AATGGGAATATATTATAAAT+GGG | + | chr8_1:2088744-2088763 | Msa1172230:CDS | 15.0% |
| !!! | TTATTTTTCTTTAATTTTGG+GGG | + | chr8_1:2089442-2089461 | Msa1172230:intron | 15.0% |
| !! | AGTATTATAAAAATATGGAA+AGG | - | chr8_1:2089517-2089536 | None:intergenic | 15.0% |
| !! | AAATTGTATTATTGAATGAT+AGG | - | chr8_1:2090106-2090125 | None:intergenic | 15.0% |
| !! | ATGAAAAATAAACAAATATG+TGG | - | chr8_1:2090137-2090156 | None:intergenic | 15.0% |
| !!! | TCTCCTTTTAATTTATATAT+TGG | - | chr8_1:2090195-2090214 | None:intergenic | 15.0% |
| !!! | ATAATTGTTTTCTTAGAAAT+TGG | + | chr8_1:2090299-2090318 | Msa1172230:intron | 15.0% |
| !!! | TAGTTTTGTTCTTATTTTTT+TGG | + | chr8_1:2090864-2090883 | Msa1172230:three_prime_UTR | 15.0% |
| !!! | TCTTATTTTTTTGGTAAAAT+TGG | + | chr8_1:2090873-2090892 | Msa1172230:three_prime_UTR | 15.0% |
| !!! | AAAATAAAGAGCTTTTTTAT+TGG | - | chr8_1:2090944-2090963 | None:intergenic | 15.0% |
| !!! | AAAGCTCTTTATTTTTTTTT+AGG | + | chr8_1:2090949-2090968 | Msa1172230:three_prime_UTR | 15.0% |
| !!! | AAGCTCTTTATTTTTTTTTA+GGG | + | chr8_1:2090950-2090969 | Msa1172230:three_prime_UTR | 15.0% |
| !!! | TGGTTAATACTTTTAAAACT+CGG | - | chr8_1:2087252-2087271 | None:intergenic | 20.0% |
| !! | ATCATTCATTAATTGATTAC+TGG | + | chr8_1:2087762-2087781 | Msa1172230:intron | 20.0% |
| !! | TTACAATTACTATCAAGAAT+GGG | - | chr8_1:2087852-2087871 | None:intergenic | 20.0% |
| !! | TTTACAATTACTATCAAGAA+TGG | - | chr8_1:2087853-2087872 | None:intergenic | 20.0% |
| !! | TGATAGTAATTGTAAAGAAA+AGG | + | chr8_1:2087857-2087876 | Msa1172230:CDS | 20.0% |
| !!! | TTTGATTGATTTTGATTTGT+TGG | - | chr8_1:2088073-2088092 | None:intergenic | 20.0% |
| !!! | ATTTACCATAATTTTCGAAA+AGG | + | chr8_1:2088294-2088313 | Msa1172230:CDS | 20.0% |
| !!! | CATTTTCAAAATTAACATGT+AGG | + | chr8_1:2088388-2088407 | Msa1172230:intron | 20.0% |
| !! | ATGGGAATATATTATAAATG+GGG | + | chr8_1:2088745-2088764 | Msa1172230:CDS | 20.0% |
| !!! | AAGATACATTTTTGTGATTT+AGG | + | chr8_1:2088848-2088867 | Msa1172230:CDS | 20.0% |
| !!! | ATTTTTGTGATTTAGGTTTT+CGG | + | chr8_1:2088855-2088874 | Msa1172230:CDS | 20.0% |
| !!! | TATTAAACCATGTTGTTTAA+AGG | - | chr8_1:2089288-2089307 | None:intergenic | 20.0% |
| !! | AAAAAAAAATTGGGAAACTT+TGG | + | chr8_1:2089467-2089486 | Msa1172230:intron | 20.0% |
| !!! | TTGGGAGTATTATAAAAATA+TGG | - | chr8_1:2089522-2089541 | None:intergenic | 20.0% |
| !! | TGGCCAATATATAAATTAAA+AGG | + | chr8_1:2090189-2090208 | Msa1172230:intron | 20.0% |
| !! | ATTCATCACAAAAATAACAA+GGG | - | chr8_1:2090542-2090561 | None:intergenic | 20.0% |
| !! | ATAATCATATTCTATGAAGT+CGG | - | chr8_1:2090610-2090629 | None:intergenic | 20.0% |
| !!! | AGCTCTTTATTTTTTTTTAG+GGG | + | chr8_1:2090951-2090970 | Msa1172230:three_prime_UTR | 20.0% |
| ! | CTCTCTATGAAAAAAAGAAT+AGG | - | chr8_1:2087017-2087036 | None:intergenic | 25.0% |
| ! | AAAAACAGAATTTAGAAGGA+AGG | - | chr8_1:2087128-2087147 | None:intergenic | 25.0% |
| ! | CAATGATTAAGAAGAAAGAA+AGG | - | chr8_1:2087155-2087174 | None:intergenic | 25.0% |
| ! | TTTCTTCTTAATCATTGAAC+CGG | + | chr8_1:2087158-2087177 | Msa1172230:five_prime_UTR | 25.0% |
| !!! | GAGTTTTAAAAGTATTAACC+AGG | + | chr8_1:2087251-2087270 | Msa1172230:five_prime_UTR | 25.0% |
| !!! | GTCATGTTTTATTTCGATAA+CGG | - | chr8_1:2087294-2087313 | None:intergenic | 25.0% |
| ! | AAGAGAAGAAACAAGAATAA+TGG | + | chr8_1:2087352-2087371 | Msa1172230:exon | 25.0% |
| !! | TGATCTTAAAGTTTTTACTG+AGG | + | chr8_1:2087586-2087605 | Msa1172230:CDS | 25.0% |
| ! | CATTAATTGATTACTGGATT+TGG | + | chr8_1:2087768-2087787 | Msa1172230:intron | 25.0% |
| ! | TAGTAATTGTAAAGAAAAGG+TGG | + | chr8_1:2087860-2087879 | Msa1172230:CDS | 25.0% |
| ! | CAAAATCAATCAAAACTCAA+AGG | + | chr8_1:2088079-2088098 | Msa1172230:CDS | 25.0% |
| ! | GTAATGCATAGTAAGAATTT+AGG | - | chr8_1:2088146-2088165 | None:intergenic | 25.0% |
| ! | AATATGAAGATGGAAAAAAG+AGG | - | chr8_1:2088170-2088189 | None:intergenic | 25.0% |
| ! | AAAGATAAGGAATATGAAGA+TGG | - | chr8_1:2088180-2088199 | None:intergenic | 25.0% |
| !!! | TTATTTTGATTATGTAGGCA+TGG | - | chr8_1:2088358-2088377 | None:intergenic | 25.0% |
| ! | AAGAAAAAGAAAAAGAACAG+AGG | - | chr8_1:2088415-2088434 | None:intergenic | 25.0% |
| ! | CAATTAGAAAATAACCAGAA+GGG | - | chr8_1:2088553-2088572 | None:intergenic | 25.0% |
| ! | TCAATTAGAAAATAACCAGA+AGG | - | chr8_1:2088554-2088573 | None:intergenic | 25.0% |
| !!! | TTCTGGTTATTTTCTAATTG+AGG | + | chr8_1:2088553-2088572 | Msa1172230:CDS | 25.0% |
| !!! | ATGTATTTTACACTGATTTG+AGG | + | chr8_1:2088648-2088667 | Msa1172230:CDS | 25.0% |
| !!! | TGTATTTTACACTGATTTGA+GGG | + | chr8_1:2088649-2088668 | Msa1172230:CDS | 25.0% |
| !! | TACTTTCTTTTATATGTCAC+AGG | + | chr8_1:2088909-2088928 | Msa1172230:intron | 25.0% |
| ! | GCATTGTACTATTGTAAAAT+AGG | - | chr8_1:2089046-2089065 | None:intergenic | 25.0% |
| ! | AAGTAAAAAATGCGAAACAT+TGG | - | chr8_1:2089186-2089205 | None:intergenic | 25.0% |
| !!! | ATGTTCTTTAAGACATTGTT+GGG | + | chr8_1:2089354-2089373 | Msa1172230:intron | 25.0% |
| ! | AAGAAAAATAAAGACATGCA+AGG | - | chr8_1:2089433-2089452 | None:intergenic | 25.0% |
| ! | TTTGGGGGTTAAAAAAAAAT+TGG | + | chr8_1:2089457-2089476 | Msa1172230:intron | 25.0% |
| ! | TTGGGGGTTAAAAAAAAATT+GGG | + | chr8_1:2089458-2089477 | Msa1172230:intron | 25.0% |
| !!! | ACTAGTATTCTCTTTGTTTT+GGG | - | chr8_1:2089540-2089559 | None:intergenic | 25.0% |
| !!! | TCACTTAGAATATGTTTTGA+GGG | - | chr8_1:2089633-2089652 | None:intergenic | 25.0% |
| !!! | TAATCTTTTTTCTGAGATTG+AGG | + | chr8_1:2089726-2089745 | Msa1172230:intron | 25.0% |
| ! | TATCTAACTGCAAAATTCTT+AGG | - | chr8_1:2089995-2090014 | None:intergenic | 25.0% |
| ! | TTGTATTATTGAATGATAGG+TGG | - | chr8_1:2090103-2090122 | None:intergenic | 25.0% |
| !!! | TTTTCATTGCTTCTGAAAAT+TGG | + | chr8_1:2090150-2090169 | Msa1172230:intron | 25.0% |
| ! | ATTTATATATTGGCCAATGA+TGG | - | chr8_1:2090185-2090204 | None:intergenic | 25.0% |
| ! | CATTCATCACAAAAATAACA+AGG | - | chr8_1:2090543-2090562 | None:intergenic | 25.0% |
| ! | AGACTAACAACAATTAATCA+TGG | - | chr8_1:2090635-2090654 | None:intergenic | 25.0% |
| !! | TGATTAATTGTTGTTAGTCT+TGG | + | chr8_1:2090635-2090654 | Msa1172230:exon | 25.0% |
| !!! | ATAATTTGAAAAGCATTTCG+TGG | + | chr8_1:2090768-2090787 | Msa1172230:three_prime_UTR | 25.0% |
| !!! | TAATTTGAAAAGCATTTCGT+GGG | + | chr8_1:2090769-2090788 | Msa1172230:three_prime_UTR | 25.0% |
| AAGGAAGCAAAAATTTGAAG+TGG | - | chr8_1:2087109-2087128 | None:intergenic | 30.0% | |
| !! | TAAAAGTATTAACCAGGTAG+AGG | + | chr8_1:2087257-2087276 | Msa1172230:five_prime_UTR | 30.0% |
| TCGAAATAAAACATGACACA+TGG | + | chr8_1:2087297-2087316 | Msa1172230:five_prime_UTR | 30.0% | |
| ! | TATTTTCCTTTATCGGCAAT+CGG | + | chr8_1:2087326-2087345 | Msa1172230:five_prime_UTR | 30.0% |
| !! | AATAATGGATGACGATGAAT+TGG | + | chr8_1:2087367-2087386 | Msa1172230:exon | 30.0% |
| TTGGAATTGGAATGTTCAAT+TGG | + | chr8_1:2087392-2087411 | Msa1172230:CDS | 30.0% | |
| GACATATTGGAAACGTAAAT+GGG | - | chr8_1:2087455-2087474 | None:intergenic | 30.0% | |
| AGACATATTGGAAACGTAAA+TGG | - | chr8_1:2087456-2087475 | None:intergenic | 30.0% | |
| ATTTACGTTTCCAATATGTC+TGG | + | chr8_1:2087455-2087474 | Msa1172230:CDS | 30.0% | |
| AAACAACAACAAGTCTTTCA+GGG | + | chr8_1:2087632-2087651 | Msa1172230:CDS | 30.0% | |
| TAATTGTAAAGAAAAGGTGG+AGG | + | chr8_1:2087863-2087882 | Msa1172230:CDS | 30.0% | |
| GAAGAAGAAGAAGAAAGATA+AGG | - | chr8_1:2088193-2088212 | None:intergenic | 30.0% | |
| CTTCTTCTTTAATGTTTCAC+AGG | + | chr8_1:2088206-2088225 | Msa1172230:intron | 30.0% | |
| ! | TGACACCTTTTCGAAAATTA+TGG | - | chr8_1:2088302-2088321 | None:intergenic | 30.0% |
| !!! | GAATACCTTTTTTTTGGCAT+TGG | - | chr8_1:2088331-2088350 | None:intergenic | 30.0% |
| !!! | GGCATTGAATACCTTTTTTT+TGG | - | chr8_1:2088337-2088356 | None:intergenic | 30.0% |
| CAAAAACAAAAGGCAATTGT+CGG | + | chr8_1:2088776-2088795 | Msa1172230:CDS | 30.0% | |
| AAAAACAAAAGGCAATTGTC+GGG | + | chr8_1:2088777-2088796 | Msa1172230:CDS | 30.0% | |
| ! | AAAGTACCTGATGACAATAA+AGG | - | chr8_1:2088895-2088914 | None:intergenic | 30.0% |
| TGCTTATGAAATTTGTCTCA+TGG | + | chr8_1:2088990-2089009 | Msa1172230:intron | 30.0% | |
| TTTGTCTCATGGTAATTGAA+AGG | + | chr8_1:2089001-2089020 | Msa1172230:intron | 30.0% | |
| TTGTCTCATGGTAATTGAAA+GGG | + | chr8_1:2089002-2089021 | Msa1172230:intron | 30.0% | |
| TGTTTGATGCAATGATAGAA+TGG | + | chr8_1:2089096-2089115 | Msa1172230:intron | 30.0% | |
| !! | TTGTTTGGTTCCATCAATTT+TGG | + | chr8_1:2089155-2089174 | Msa1172230:intron | 30.0% |
| ATTGGTTACACCAAAATTGA+TGG | - | chr8_1:2089168-2089187 | None:intergenic | 30.0% | |
| !! | CATGTTCTTTAAGACATTGT+TGG | + | chr8_1:2089353-2089372 | Msa1172230:intron | 30.0% |
| AAATAAAGACATGCAAGGTA+GGG | - | chr8_1:2089428-2089447 | None:intergenic | 30.0% | |
| AAAATAAAGACATGCAAGGT+AGG | - | chr8_1:2089429-2089448 | None:intergenic | 30.0% | |
| AAAAAATTGGGAAACTTTGG+AGG | + | chr8_1:2089470-2089489 | Msa1172230:intron | 30.0% | |
| AAAAATTGGGAAACTTTGGA+GGG | + | chr8_1:2089471-2089490 | Msa1172230:intron | 30.0% | |
| !! | GACTAGTATTCTCTTTGTTT+TGG | - | chr8_1:2089541-2089560 | None:intergenic | 30.0% |
| !!! | GTTTGGAAGTGTTTTAAGAT+TGG | - | chr8_1:2089583-2089602 | None:intergenic | 30.0% |
| !!! | TTAGAATATGTTTTGAGGGA+GGG | - | chr8_1:2089629-2089648 | None:intergenic | 30.0% |
| ! | CTCACTTAGAATATGTTTTG+AGG | - | chr8_1:2089634-2089653 | None:intergenic | 30.0% |
| TTAACATAGTCACTTCACTA+CGG | - | chr8_1:2089694-2089713 | None:intergenic | 30.0% | |
| TTCCTTATACTATGGACAAA+CGG | - | chr8_1:2089948-2089967 | None:intergenic | 30.0% | |
| TATTGAATGATAGGTGGAAT+TGG | - | chr8_1:2090097-2090116 | None:intergenic | 30.0% | |
| TAGAAATTGGATCTTTAACG+TGG | + | chr8_1:2090312-2090331 | Msa1172230:intron | 30.0% | |
| ATCTCGTATTACTAAGGTAT+GGG | - | chr8_1:2090370-2090389 | None:intergenic | 30.0% | |
| TATCTCGTATTACTAAGGTA+TGG | - | chr8_1:2090371-2090390 | None:intergenic | 30.0% | |
| TTCAGTTGAAAAGTGACAAT+TGG | - | chr8_1:2090438-2090457 | None:intergenic | 30.0% | |
| ! | AAGATACGTTTTCAGAAATG+CGG | + | chr8_1:2090456-2090475 | Msa1172230:CDS | 30.0% |
| CAAAATATTCAGAGCTACAA+AGG | + | chr8_1:2090485-2090504 | Msa1172230:CDS | 30.0% | |
| !! | TTAATTGTTGTTAGTCTTGG+AGG | + | chr8_1:2090638-2090657 | Msa1172230:exon | 30.0% |
| !! | TAATTGTTGTTAGTCTTGGA+GGG | + | chr8_1:2090639-2090658 | Msa1172230:exon | 30.0% |
| TCTTAATCATTGAACCGGTT+CGG | + | chr8_1:2087163-2087182 | Msa1172230:five_prime_UTR | 35.0% | |
| CGATGAATTGGAATTGGAAT+TGG | + | chr8_1:2087379-2087398 | Msa1172230:CDS | 35.0% | |
| AAAGAGGAACCCTAACAATT+GGG | - | chr8_1:2087481-2087500 | None:intergenic | 35.0% | |
| AAAAGAGGAACCCTAACAAT+TGG | - | chr8_1:2087482-2087501 | None:intergenic | 35.0% | |
| AGAAGTGAATCCTGAAAAAG+AGG | - | chr8_1:2087497-2087516 | None:intergenic | 35.0% | |
| AATCAGGAGGTAATTCAGAT+TGG | - | chr8_1:2087538-2087557 | None:intergenic | 35.0% | |
| TCATGATCATGATTCGAATC+AGG | - | chr8_1:2087554-2087573 | None:intergenic | 35.0% | |
| ! | TTTTACTGAGGACCAGTTAA+TGG | + | chr8_1:2087598-2087617 | Msa1172230:CDS | 35.0% |
| GAAACAACAACAAGTCTTTC+AGG | + | chr8_1:2087631-2087650 | Msa1172230:CDS | 35.0% | |
| ! | AATGGGTTTATTTGTTCGAC+GGG | - | chr8_1:2087835-2087854 | None:intergenic | 35.0% |
| ! | GAATGGGTTTATTTGTTCGA+CGG | - | chr8_1:2087836-2087855 | None:intergenic | 35.0% |
| TAAAGCAAGATAGGTGAATC+AGG | - | chr8_1:2088023-2088042 | None:intergenic | 35.0% | |
| AATCAGGACTAAAGCAAGAT+AGG | - | chr8_1:2088032-2088051 | None:intergenic | 35.0% | |
| AGAATTTAGGAGAACCTTTG+TGG | - | chr8_1:2088133-2088152 | None:intergenic | 35.0% | |
| GCTATCCAATGCCAAAAAAA+AGG | + | chr8_1:2088323-2088342 | Msa1172230:CDS | 35.0% | |
| CCAGAACTTATCTGTATTGA+GGG | + | chr8_1:2088475-2088494 | Msa1172230:CDS | 35.0% | |
| ATAGTGATCTCGTTACAAGA+GGG | - | chr8_1:2088593-2088612 | None:intergenic | 35.0% | |
| AATAGTGATCTCGTTACAAG+AGG | - | chr8_1:2088594-2088613 | None:intergenic | 35.0% | |
| AAATACATCCTGCAAGAAAC+TGG | - | chr8_1:2088636-2088655 | None:intergenic | 35.0% | |
| !!! | TTTTGAAGCCAATCGAGTAT+GGG | - | chr8_1:2088701-2088720 | None:intergenic | 35.0% |
| GGAACTACAGCAAAAACAAA+AGG | + | chr8_1:2088766-2088785 | Msa1172230:CDS | 35.0% | |
| AAAACAAAAGGCAATTGTCG+GGG | + | chr8_1:2088778-2088797 | Msa1172230:CDS | 35.0% | |
| ATCTCAAAAGATGCAAAACG+AGG | - | chr8_1:2088824-2088843 | None:intergenic | 35.0% | |
| TGGATACCTTTATTGTCATC+AGG | + | chr8_1:2088886-2088905 | Msa1172230:CDS | 35.0% | |
| TGGTAATTGAAAGGGAAGTT+TGG | + | chr8_1:2089010-2089029 | Msa1172230:intron | 35.0% | |
| TGAGCACACAACAAAACATA+TGG | - | chr8_1:2089259-2089278 | None:intergenic | 35.0% | |
| AGCACTACCTTTAAACAACA+TGG | + | chr8_1:2089278-2089297 | Msa1172230:intron | 35.0% | |
| AGACATTGTTGGGAAGTTAT+AGG | + | chr8_1:2089364-2089383 | Msa1172230:intron | 35.0% | |
| AATAAAGACATGCAAGGTAG+GGG | - | chr8_1:2089427-2089446 | None:intergenic | 35.0% | |
| !!! | TGGAAGTGTTTTAAGATTGG+AGG | - | chr8_1:2089580-2089599 | None:intergenic | 35.0% |
| AAAACACTTCCAAACCTTGT+TGG | + | chr8_1:2089588-2089607 | Msa1172230:intron | 35.0% | |
| AAACACTTCCAAACCTTGTT+GGG | + | chr8_1:2089589-2089608 | Msa1172230:intron | 35.0% | |
| !!! | TAGAATATGTTTTGAGGGAG+GGG | - | chr8_1:2089628-2089647 | None:intergenic | 35.0% |
| !!! | CTTAGAATATGTTTTGAGGG+AGG | - | chr8_1:2089630-2089649 | None:intergenic | 35.0% |
| ATGGTCTCATTCTTTCACTA+TGG | - | chr8_1:2089660-2089679 | None:intergenic | 35.0% | |
| !!! | CACTACGGCTACTTTTTTTA+TGG | - | chr8_1:2089679-2089698 | None:intergenic | 35.0% |
| !!! | TCTTTTTTCTGAGATTGAGG+TGG | + | chr8_1:2089729-2089748 | Msa1172230:intron | 35.0% |
| ! | CTTTTCTGATTGAATCATGC+AGG | - | chr8_1:2089765-2089784 | None:intergenic | 35.0% |
| TTGGATCCAATATGAACCAA+GGG | - | chr8_1:2089822-2089841 | None:intergenic | 35.0% | |
| TTTGGATCCAATATGAACCA+AGG | - | chr8_1:2089823-2089842 | None:intergenic | 35.0% | |
| GGTGACTCTAAGTAAAATTG+TGG | + | chr8_1:2089896-2089915 | Msa1172230:intron | 35.0% | |
| AACCGTTTGTCCATAGTATA+AGG | + | chr8_1:2089943-2089962 | Msa1172230:intron | 35.0% | |
| CGTCTTCATTCCTTATACTA+TGG | - | chr8_1:2089956-2089975 | None:intergenic | 35.0% | |
| TAGTATAAGGAATGAAGACG+TGG | + | chr8_1:2089956-2089975 | Msa1172230:intron | 35.0% | |
| AGTATAAGGAATGAAGACGT+GGG | + | chr8_1:2089957-2089976 | Msa1172230:intron | 35.0% | |
| AGTAAGCAATAGCTTCCTAT+AGG | + | chr8_1:2090020-2090039 | Msa1172230:intron | 35.0% | |
| TAGCACTAGCAAACTTGAAA+AGG | + | chr8_1:2090224-2090243 | Msa1172230:intron | 35.0% | |
| AGCACTAGCAAACTTGAAAA+GGG | + | chr8_1:2090225-2090244 | Msa1172230:intron | 35.0% | |
| CCTCATATCTCGTATTACTA+AGG | - | chr8_1:2090376-2090395 | None:intergenic | 35.0% | |
| CCTTAGTAATACGAGATATG+AGG | + | chr8_1:2090373-2090392 | Msa1172230:CDS | 35.0% | |
| CAAAAATAACAAGGGTTGTC+TGG | - | chr8_1:2090534-2090553 | None:intergenic | 35.0% | |
| TGAAAAATTCAATCGCCAGT+AGG | - | chr8_1:2090668-2090687 | None:intergenic | 35.0% | |
| !!! | GTGGTTTTGAAAAACCGAAC+CGG | - | chr8_1:2087180-2087199 | None:intergenic | 40.0% |
| GGATGACGATGAATTGGAAT+TGG | + | chr8_1:2087373-2087392 | Msa1172230:CDS | 40.0% | |
| ATCCTTCAATCTCAATTCCG+AGG | + | chr8_1:2087423-2087442 | Msa1172230:CDS | 40.0% | |
| TCCTTCAATCTCAATTCCGA+GGG | + | chr8_1:2087424-2087443 | Msa1172230:CDS | 40.0% | |
| AACAATTGGGCCAGACATAT+TGG | - | chr8_1:2087468-2087487 | None:intergenic | 40.0% | |
| ATATGTCTGGCCCAATTGTT+AGG | + | chr8_1:2087468-2087487 | Msa1172230:CDS | 40.0% | |
| TATGTCTGGCCCAATTGTTA+GGG | + | chr8_1:2087469-2087488 | Msa1172230:CDS | 40.0% | |
| ! | TGTTAGGGTTCCTCTTTTTC+AGG | + | chr8_1:2087484-2087503 | Msa1172230:CDS | 40.0% |
| TGATCATGATTCGAATCAGG+AGG | - | chr8_1:2087551-2087570 | None:intergenic | 40.0% | |
| TCAAAGCCATGTCCATTAAC+TGG | - | chr8_1:2087613-2087632 | None:intergenic | 40.0% | |
| GTCAGAATAACAAGCTCTTC+AGG | + | chr8_1:2087802-2087821 | Msa1172230:CDS | 40.0% | |
| TTGTAAAGAAAAGGTGGAGG+AGG | + | chr8_1:2087866-2087885 | Msa1172230:CDS | 40.0% | |
| TGTCAGAATCAAACACAAGC+AGG | + | chr8_1:2087890-2087909 | Msa1172230:CDS | 40.0% | |
| GATTGATTGATCCTGGAATC+AGG | - | chr8_1:2088048-2088067 | None:intergenic | 40.0% | |
| CTCAAAGGATGATGTCTCTT+AGG | + | chr8_1:2088094-2088113 | Msa1172230:CDS | 40.0% | |
| TGTTTCACAGGTCAACACAA+TGG | + | chr8_1:2088218-2088237 | Msa1172230:intron | 40.0% | |
| ACCAAGAACTAACAGCTCTT+GGG | - | chr8_1:2088453-2088472 | None:intergenic | 40.0% | |
| GCCAGAACTTATCTGTATTG+AGG | + | chr8_1:2088474-2088493 | Msa1172230:CDS | 40.0% | |
| CCCTCAATACAGATAAGTTC+TGG | - | chr8_1:2088478-2088497 | None:intergenic | 40.0% | |
| GGACAAGATCAATTGCTCAA+CGG | + | chr8_1:2088496-2088515 | Msa1172230:CDS | 40.0% | |
| AATAACCAGAAGGGTCATGT+TGG | - | chr8_1:2088544-2088563 | None:intergenic | 40.0% | |
| CTGGTCAAATCAATAGCAGA+TGG | - | chr8_1:2088677-2088696 | None:intergenic | 40.0% | |
| !!! | GTTTTGAAGCCAATCGAGTA+TGG | - | chr8_1:2088702-2088721 | None:intergenic | 40.0% |
| !! | TGTGATTTAGGTTTTCGGCT+TGG | + | chr8_1:2088860-2088879 | Msa1172230:CDS | 40.0% |
| ACAATGCCTCTCAAGTGAAA+AGG | + | chr8_1:2089059-2089078 | Msa1172230:intron | 40.0% | |
| ! | GTTTTGCCTTTTCACTTGAG+AGG | - | chr8_1:2089068-2089087 | None:intergenic | 40.0% |
| ACAAAACACTCAGAGCTTGA+CGG | - | chr8_1:2089139-2089158 | None:intergenic | 40.0% | |
| !!! | CAAGCTCTGAGTGTTTTGTT+TGG | + | chr8_1:2089140-2089159 | Msa1172230:intron | 40.0% |
| TCTTGATCTAGCGACAGTTA+TGG | - | chr8_1:2089312-2089331 | None:intergenic | 40.0% | |
| CATTGTTGGGAAGTTATAGG+AGG | + | chr8_1:2089367-2089386 | Msa1172230:intron | 40.0% | |
| TTGGGAAGTTATAGGAGGAA+GGG | + | chr8_1:2089372-2089391 | Msa1172230:intron | 40.0% | |
| !!! | AGAATATGTTTTGAGGGAGG+GGG | - | chr8_1:2089627-2089646 | None:intergenic | 40.0% |
| ! | GATTCAATCAGAAAAGCACG+AGG | + | chr8_1:2089769-2089788 | Msa1172230:intron | 40.0% |
| AGGGGTAAAAGAGGGAAAAA+GGG | + | chr8_1:2089874-2089893 | Msa1172230:intron | 40.0% | |
| CTCTAAGTAAAATTGTGGCG+TGG | + | chr8_1:2089901-2089920 | Msa1172230:intron | 40.0% | |
| TTGGAATGTTTGCAGATTCG+AGG | - | chr8_1:2090078-2090097 | None:intergenic | 40.0% | |
| TTGGTTCCTAACACCATCAT+TGG | + | chr8_1:2090169-2090188 | Msa1172230:intron | 40.0% | |
| ! | TATTGGCCAATGATGGTGTT+AGG | - | chr8_1:2090178-2090197 | None:intergenic | 40.0% |
| TCATTGAGACCTAACTACGA+TGG | + | chr8_1:2090256-2090275 | Msa1172230:intron | 40.0% | |
| CATCAAACACCATCGTAGTT+AGG | - | chr8_1:2090268-2090287 | None:intergenic | 40.0% | |
| AACTACGATGGTGTTTGATG+TGG | + | chr8_1:2090268-2090287 | Msa1172230:intron | 40.0% | |
| ATGTTCTCTGTCTACTTGCA+GGG | + | chr8_1:2090336-2090355 | Msa1172230:intron | 40.0% | |
| ATGCCGATGATGTACAGAAT+TGG | + | chr8_1:2090403-2090422 | Msa1172230:CDS | 40.0% | |
| TGCCGATGATGTACAGAATT+GGG | + | chr8_1:2090404-2090423 | Msa1172230:CDS | 40.0% | |
| AGCCCAATTCTGTACATCAT+CGG | - | chr8_1:2090409-2090428 | None:intergenic | 40.0% | |
| TCTATGAAGTCGGTATACGA+TGG | - | chr8_1:2090600-2090619 | None:intergenic | 40.0% | |
| ! | CTTTGCTGCAACACGTATTT+TGG | + | chr8_1:2090741-2090760 | Msa1172230:three_prime_UTR | 40.0% |
| TATAGTGTGACTATAAGCGC+TGG | - | chr8_1:2090803-2090822 | None:intergenic | 40.0% | |
| TGATGTAGTCTACATGCTCT+AGG | - | chr8_1:2090916-2090935 | None:intergenic | 40.0% | |
| CGCTCAAAACCGGAAAAAAC+CGG | - | chr8_1:2087210-2087229 | None:intergenic | 45.0% | |
| GTTTCAACTCTACCTCTACC+TGG | - | chr8_1:2087272-2087291 | None:intergenic | 45.0% | |
| CCTTCAATCTCAATTCCGAG+GGG | + | chr8_1:2087425-2087444 | Msa1172230:CDS | 45.0% | |
| ! | TGAGGACCAGTTAATGGACA+TGG | + | chr8_1:2087604-2087623 | Msa1172230:CDS | 45.0% |
| ! | TTACTGGATTTGGTTGCAGC+AGG | + | chr8_1:2087778-2087797 | Msa1172230:intron | 45.0% |
| ! | TACTGGATTTGGTTGCAGCA+GGG | + | chr8_1:2087779-2087798 | Msa1172230:intron | 45.0% |
| CAGAATCAAACACAAGCAGG+AGG | + | chr8_1:2087893-2087912 | Msa1172230:CDS | 45.0% | |
| ACACAAGCAGGAGGAAGATA+AGG | + | chr8_1:2087902-2087921 | Msa1172230:CDS | 45.0% | |
| AGCAAGATAGGTGAATCAGG+AGG | - | chr8_1:2088020-2088039 | None:intergenic | 45.0% | |
| CTTGCTTTAGTCCTGATTCC+AGG | + | chr8_1:2088034-2088053 | Msa1172230:intron | 45.0% | |
| GTTGGCAGATTGATTGATCC+TGG | - | chr8_1:2088055-2088074 | None:intergenic | 45.0% | |
| AACCTTTGTGGCAGAACTTG+TGG | - | chr8_1:2088121-2088140 | None:intergenic | 45.0% | |
| ACAACTTCTGAATCCTGCAC+AGG | - | chr8_1:2088261-2088280 | None:intergenic | 45.0% | |
| ! | ACCCAAGAGCTGTTAGTTCT+TGG | + | chr8_1:2088449-2088468 | Msa1172230:CDS | 45.0% |
| CACCAAGAACTAACAGCTCT+TGG | - | chr8_1:2088454-2088473 | None:intergenic | 45.0% | |
| ! | CAAGAGCTGTTAGTTCTTGG+TGG | + | chr8_1:2088452-2088471 | Msa1172230:CDS | 45.0% |
| GACCAGGTTATGCAAAAAGC+TGG | + | chr8_1:2088518-2088537 | Msa1172230:CDS | 45.0% | |
| !! | CGATTGGCTTCAAAACTCCA+AGG | + | chr8_1:2088706-2088725 | Msa1172230:CDS | 45.0% |
| TTGGCTTCAAAACTCCAAGG+AGG | + | chr8_1:2088709-2088728 | Msa1172230:CDS | 45.0% | |
| GTTGGGAAGTTATAGGAGGA+AGG | + | chr8_1:2089371-2089390 | Msa1172230:intron | 45.0% | |
| GAAGTTATAGGAGGAAGGGA+GGG | + | chr8_1:2089376-2089395 | Msa1172230:intron | 45.0% | |
| AAGTTATAGGAGGAAGGGAG+GGG | + | chr8_1:2089377-2089396 | Msa1172230:intron | 45.0% | |
| !!! | AATATGTTTTGAGGGAGGGG+GGG | - | chr8_1:2089625-2089644 | None:intergenic | 45.0% |
| !!! | GAATATGTTTTGAGGGAGGG+GGG | - | chr8_1:2089626-2089645 | None:intergenic | 45.0% |
| TCTGTTAGAGCTGATCAGCT+TGG | + | chr8_1:2089795-2089814 | Msa1172230:intron | 45.0% | |
| CTGTTAGAGCTGATCAGCTT+GGG | + | chr8_1:2089796-2089815 | Msa1172230:intron | 45.0% | |
| ATCCAAATAAGCCCATAGCG+TGG | + | chr8_1:2089836-2089855 | Msa1172230:intron | 45.0% | |
| GAGTAAACTCTCCACGCTAT+GGG | - | chr8_1:2089850-2089869 | None:intergenic | 45.0% | |
| AGAGTAAACTCTCCACGCTA+TGG | - | chr8_1:2089851-2089870 | None:intergenic | 45.0% | |
| TAGCGTGGAGAGTTTACTCT+AGG | + | chr8_1:2089851-2089870 | Msa1172230:intron | 45.0% | |
| ! | GTGGAGAGTTTACTCTAGGA+GGG | + | chr8_1:2089855-2089874 | Msa1172230:intron | 45.0% |
| ! | TGGAGAGTTTACTCTAGGAG+GGG | + | chr8_1:2089856-2089875 | Msa1172230:intron | 45.0% |
| ! | TACTCTAGGAGGGGTAAAAG+AGG | + | chr8_1:2089865-2089884 | Msa1172230:intron | 45.0% |
| ! | ACTCTAGGAGGGGTAAAAGA+GGG | + | chr8_1:2089866-2089885 | Msa1172230:intron | 45.0% |
| GAGGGGTAAAAGAGGGAAAA+AGG | + | chr8_1:2089873-2089892 | Msa1172230:intron | 45.0% | |
| GGGGTAAAAGAGGGAAAAAG+GGG | + | chr8_1:2089875-2089894 | Msa1172230:intron | 45.0% | |
| CATGTTCTCTGTCTACTTGC+AGG | + | chr8_1:2090335-2090354 | Msa1172230:intron | 45.0% | |
| AGGTCACTGTGGATGACAAA+TGG | + | chr8_1:2090505-2090524 | Msa1172230:CDS | 45.0% | |
| ATCCTCTGCTAGGTGAAGAA+GGG | - | chr8_1:2090571-2090590 | None:intergenic | 45.0% | |
| !! | GTAGTCTACATGCTCTAGGA+AGG | - | chr8_1:2090912-2090931 | None:intergenic | 45.0% |
| TTTCAAAACCACCGAGTCGC+CGG | + | chr8_1:2087188-2087207 | Msa1172230:five_prime_UTR | 50.0% | |
| CTGAACTGCTCGCTCAAAAC+CGG | - | chr8_1:2087220-2087239 | None:intergenic | 50.0% | |
| ! | CTTCTGCCGATTGCCGATAA+AGG | - | chr8_1:2087335-2087354 | None:intergenic | 50.0% |
| CCCCTCGGAATTGAGATTGA+AGG | - | chr8_1:2087428-2087447 | None:intergenic | 50.0% | |
| TCAATCTCAATTCCGAGGGG+TGG | + | chr8_1:2087428-2087447 | Msa1172230:CDS | 50.0% | |
| AACTCTGCTGCTGCAGCATT+AGG | - | chr8_1:2087686-2087705 | None:intergenic | 50.0% | |
| ! | ACTGGATTTGGTTGCAGCAG+GGG | + | chr8_1:2087780-2087799 | Msa1172230:intron | 50.0% |
| GTCCACAAGTTCTGCCACAA+AGG | + | chr8_1:2088116-2088135 | Msa1172230:CDS | 50.0% | |
| GGTCAACACAATGGCTCTTC+AGG | + | chr8_1:2088227-2088246 | Msa1172230:intron | 50.0% | |
| GATCAATTGCTCAACGGACC+AGG | + | chr8_1:2088502-2088521 | Msa1172230:CDS | 50.0% | |
| ! | GGCCAGCTTTTTGCATAACC+TGG | - | chr8_1:2088523-2088542 | None:intergenic | 50.0% |
| CTCGTTACAAGAGGGACTAG+AGG | - | chr8_1:2088585-2088604 | None:intergenic | 50.0% | |
| TCTGACGACCAGTTTCTTGC+AGG | + | chr8_1:2088625-2088644 | Msa1172230:intron | 50.0% | |
| TGACCAGACCCATACTCGAT+TGG | + | chr8_1:2088690-2088709 | Msa1172230:CDS | 50.0% | |
| AAGCCAATCGAGTATGGGTC+TGG | - | chr8_1:2088696-2088715 | None:intergenic | 50.0% | |
| GCTTCAAAACTCCAAGGAGG+AGG | + | chr8_1:2088712-2088731 | Msa1172230:CDS | 50.0% | |
| TTTCTTCTGTGCCTCCTCCT+TGG | - | chr8_1:2088726-2088745 | None:intergenic | 50.0% | |
| ! | AGGAGGAGGCACAGAAGAAA+TGG | + | chr8_1:2088726-2088745 | Msa1172230:CDS | 50.0% |
| ! | GGAGGAGGCACAGAAGAAAT+GGG | + | chr8_1:2088727-2088746 | Msa1172230:CDS | 50.0% |
| !!! | TTAGGTTTTCGGCTTGGTGC+TGG | + | chr8_1:2088866-2088885 | Msa1172230:CDS | 50.0% |
| ACTCAGAGCTTGACGGAACA+AGG | - | chr8_1:2089132-2089151 | None:intergenic | 50.0% | |
| GGAAGTTATAGGAGGAAGGG+AGG | + | chr8_1:2089375-2089394 | Msa1172230:intron | 50.0% | |
| !!! | ATATGTTTTGAGGGAGGGGG+GGG | - | chr8_1:2089624-2089643 | None:intergenic | 50.0% |
| CTTGGGCCCTTGGTTCATAT+TGG | + | chr8_1:2089813-2089832 | Msa1172230:intron | 50.0% | |
| CTCCACGCTATGGGCTTATT+TGG | - | chr8_1:2089841-2089860 | None:intergenic | 50.0% | |
| CGTGGAGAGTTTACTCTAGG+AGG | + | chr8_1:2089854-2089873 | Msa1172230:intron | 50.0% | |
| TTCCTATAGGAGCTACGCTC+TGG | + | chr8_1:2090033-2090052 | Msa1172230:intron | 50.0% | |
| TCCTATAGGAGCTACGCTCT+GGG | + | chr8_1:2090034-2090053 | Msa1172230:intron | 50.0% | |
| CAGAGCTACAAAGGTCACTG+TGG | + | chr8_1:2090494-2090513 | Msa1172230:CDS | 50.0% | |
| TTCCCTTCTTCACCTAGCAG+AGG | + | chr8_1:2090566-2090585 | Msa1172230:CDS | 50.0% | |
| CATCCTCTGCTAGGTGAAGA+AGG | - | chr8_1:2090572-2090591 | None:intergenic | 50.0% | |
| CTTCTTCACCTAGCAGAGGA+TGG | + | chr8_1:2090570-2090589 | Msa1172230:CDS | 50.0% | |
| !!! | ACCGAGTCGCCGGTTTTTTC+CGG | + | chr8_1:2087198-2087217 | Msa1172230:five_prime_UTR | 55.0% |
| ACCGGAAAAAACCGGCGACT+CGG | - | chr8_1:2087202-2087221 | None:intergenic | 55.0% | |
| !!! | CGGTTTTGAGCGAGCAGTTC+AGG | + | chr8_1:2087218-2087237 | Msa1172230:five_prime_UTR | 55.0% |
| ! | GAGCGAGCAGTTCAGGTTCA+CGG | + | chr8_1:2087225-2087244 | Msa1172230:five_prime_UTR | 55.0% |
| ACGTAAATGGGTCCACCCCT+CGG | - | chr8_1:2087443-2087462 | None:intergenic | 55.0% | |
| TCTGCTGCTGCAGCATTAGG+AGG | - | chr8_1:2087683-2087702 | None:intergenic | 55.0% | |
| ! | TCAGGAGCACATACCTGTGC+AGG | + | chr8_1:2088245-2088264 | Msa1172230:CDS | 55.0% |
| ATAGGAGGAAGGGAGGGGAA+AGG | + | chr8_1:2089382-2089401 | Msa1172230:intron | 55.0% | |
| AGGAAGGGAGGGGAAAGGAA+AGG | + | chr8_1:2089387-2089406 | Msa1172230:intron | 55.0% | |
| AGGGGAAAGGAAAGGAGAGG+AGG | + | chr8_1:2089395-2089414 | Msa1172230:intron | 55.0% | |
| GGGGAAAGGAAAGGAGAGGA+GGG | + | chr8_1:2089396-2089415 | Msa1172230:intron | 55.0% | |
| GGGAAAGGAAAGGAGAGGAG+GGG | + | chr8_1:2089397-2089416 | Msa1172230:intron | 55.0% | |
| !!! | TATGTTTTGAGGGAGGGGGG+GGG | - | chr8_1:2089623-2089642 | None:intergenic | 55.0% |
| ! | AGCTACGCTCTGGGCAGTTT+AGG | + | chr8_1:2090043-2090062 | Msa1172230:intron | 55.0% |
| ATGGAGAGCCATCCTCTGCT+AGG | - | chr8_1:2090581-2090600 | None:intergenic | 55.0% | |
| AGTCTTGGAGGGACACCTAC+TGG | + | chr8_1:2090650-2090669 | Msa1172230:three_prime_UTR | 55.0% | |
| ! | GGAAAAAACCGGCGACTCGG+TGG | - | chr8_1:2087199-2087218 | None:intergenic | 60.0% |
| GCTGGCCAACATGACCCTTC+TGG | + | chr8_1:2088536-2088555 | Msa1172230:CDS | 60.0% | |
| GGGAGGGGAAAGGAAAGGAG+AGG | + | chr8_1:2089392-2089411 | Msa1172230:intron | 60.0% | |
| !!! | ATGTTTTGAGGGAGGGGGGG+GGG | - | chr8_1:2089622-2089641 | None:intergenic | 60.0% |
| AGCTGATCAGCTTGGGCCCT+TGG | + | chr8_1:2089803-2089822 | Msa1172230:intron | 60.0% | |
| GCCCAGAGCGTAGCTCCTAT+AGG | - | chr8_1:2090038-2090057 | None:intergenic | 60.0% | |
| GGGGGGGACCCAACAAGGTT+TGG | - | chr8_1:2089600-2089619 | None:intergenic | 65.0% | |
| !!! | TGTTTTGAGGGAGGGGGGGG+GGG | - | chr8_1:2089621-2089640 | None:intergenic | 65.0% |
| !! | TTTTGAGGGAGGGGGGGGGG+GGG | - | chr8_1:2089619-2089638 | None:intergenic | 70.0% |
| !!! | GTTTTGAGGGAGGGGGGGGG+GGG | - | chr8_1:2089620-2089639 | None:intergenic | 70.0% |
| TTTGAGGGAGGGGGGGGGGG+GGG | - | chr8_1:2089618-2089637 | None:intergenic | 75.0% | |
| ! | GGGGGGGGGGGGACCCAACA+AGG | - | chr8_1:2089605-2089624 | None:intergenic | 80.0% |
| ! | TTGAGGGAGGGGGGGGGGGG+GGG | - | chr8_1:2089617-2089636 | None:intergenic | 80.0% |
| ! | TGAGGGAGGGGGGGGGGGGG+GGG | - | chr8_1:2089616-2089635 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 2086986 | 2091049 | 2086986 | ID=Msa1172230;Name=Msa1172230 |
| chr8_1 | mRNA | 2086986 | 2091049 | 2086986 | ID=Msa1172230-mRNA-1;Parent=Msa1172230;Name=Msa1172230-mRNA-1;_AED=0.08;_eAED=0.08;_QI=385|1|1|1|1|1|7|408|455 |
| chr8_1 | exon | 2086986 | 2087702 | 2086986 | ID=Msa1172230-mRNA-1:exon:830;Parent=Msa1172230-mRNA-1 |
| chr8_1 | exon | 2087797 | 2087949 | 2087797 | ID=Msa1172230-mRNA-1:exon:831;Parent=Msa1172230-mRNA-1 |
| chr8_1 | exon | 2088044 | 2088137 | 2088044 | ID=Msa1172230-mRNA-1:exon:832;Parent=Msa1172230-mRNA-1 |
| chr8_1 | exon | 2088228 | 2088344 | 2088228 | ID=Msa1172230-mRNA-1:exon:833;Parent=Msa1172230-mRNA-1 |
| chr8_1 | exon | 2088449 | 2088574 | 2088449 | ID=Msa1172230-mRNA-1:exon:834;Parent=Msa1172230-mRNA-1 |
| chr8_1 | exon | 2088647 | 2088907 | 2088647 | ID=Msa1172230-mRNA-1:exon:835;Parent=Msa1172230-mRNA-1 |
| chr8_1 | exon | 2090357 | 2091049 | 2090357 | ID=Msa1172230-mRNA-1:exon:836;Parent=Msa1172230-mRNA-1 |
| chr8_1 | five_prime_UTR | 2086986 | 2087370 | 2086986 | ID=Msa1172230-mRNA-1:five_prime_utr;Parent=Msa1172230-mRNA-1 |
| chr8_1 | CDS | 2087371 | 2087702 | 2087371 | ID=Msa1172230-mRNA-1:cds;Parent=Msa1172230-mRNA-1 |
| chr8_1 | CDS | 2087797 | 2087949 | 2087797 | ID=Msa1172230-mRNA-1:cds;Parent=Msa1172230-mRNA-1 |
| chr8_1 | CDS | 2088044 | 2088137 | 2088044 | ID=Msa1172230-mRNA-1:cds;Parent=Msa1172230-mRNA-1 |
| chr8_1 | CDS | 2088228 | 2088344 | 2088228 | ID=Msa1172230-mRNA-1:cds;Parent=Msa1172230-mRNA-1 |
| chr8_1 | CDS | 2088449 | 2088574 | 2088449 | ID=Msa1172230-mRNA-1:cds;Parent=Msa1172230-mRNA-1 |
| chr8_1 | CDS | 2088647 | 2088907 | 2088647 | ID=Msa1172230-mRNA-1:cds;Parent=Msa1172230-mRNA-1 |
| chr8_1 | CDS | 2090357 | 2090641 | 2090357 | ID=Msa1172230-mRNA-1:cds;Parent=Msa1172230-mRNA-1 |
| chr8_1 | three_prime_UTR | 2090642 | 2091049 | 2090642 | ID=Msa1172230-mRNA-1:three_prime_utr;Parent=Msa1172230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
