Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene039287.t1 | XP_013464451.1 | 85.9 | 446 | 63 | 0 | 19 | 464 | 6 | 451 | 8.50E-216 | 759.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene039287.t1 | Q9LUC4 | 28.5 | 473 | 284 | 13 | 8 | 458 | 1 | 441 | 8.2e-34 | 146.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene039287.t1 | A0A072VA50 | 85.9 | 446 | 63 | 0 | 19 | 464 | 6 | 451 | 6.1e-216 | 759.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene039287.t1 | MTR_2g072530 | 85.874 | 446 | 63 | 0 | 19 | 464 | 6 | 451 | 0.0 | 789 |
MS.gene039287.t1 | MTR_2g072550 | 58.582 | 268 | 39 | 3 | 197 | 464 | 31 | 226 | 5.65e-92 | 278 |
MS.gene039287.t1 | MTR_7g094030 | 33.263 | 472 | 280 | 14 | 7 | 459 | 7 | 462 | 2.24e-65 | 218 |
MS.gene039287.t1 | MTR_2g082880 | 33.333 | 435 | 269 | 10 | 18 | 445 | 2 | 422 | 4.01e-65 | 216 |
MS.gene039287.t1 | MTR_2g072720 | 34.136 | 457 | 260 | 16 | 26 | 459 | 39 | 477 | 6.55e-62 | 209 |
MS.gene039287.t1 | MTR_2g082800 | 34.793 | 411 | 241 | 12 | 10 | 412 | 10 | 401 | 3.98e-58 | 197 |
MS.gene039287.t1 | MTR_2g072730 | 33.482 | 448 | 274 | 15 | 17 | 449 | 7 | 445 | 5.09e-57 | 196 |
MS.gene039287.t1 | MTR_1g115250 | 31.111 | 450 | 260 | 13 | 9 | 444 | 20 | 433 | 1.06e-55 | 191 |
MS.gene039287.t1 | MTR_2g082850 | 35.946 | 370 | 206 | 12 | 10 | 363 | 10 | 364 | 6.91e-55 | 187 |
MS.gene039287.t1 | MTR_4g032845 | 31.050 | 438 | 270 | 14 | 26 | 444 | 3 | 427 | 7.59e-53 | 184 |
MS.gene039287.t1 | MTR_1g025870 | 35.219 | 389 | 214 | 16 | 76 | 443 | 132 | 503 | 3.16e-44 | 162 |
MS.gene039287.t1 | MTR_2g082780 | 39.234 | 209 | 123 | 4 | 22 | 229 | 8 | 213 | 8.04e-39 | 140 |
MS.gene039287.t1 | MTR_6g022350 | 27.551 | 490 | 273 | 15 | 22 | 444 | 2 | 476 | 2.89e-37 | 142 |
MS.gene039287.t1 | MTR_2g067210 | 32.391 | 389 | 219 | 15 | 10 | 366 | 26 | 402 | 5.24e-37 | 142 |
MS.gene039287.t1 | MTR_5g005700 | 29.935 | 461 | 273 | 15 | 26 | 447 | 31 | 480 | 6.59e-35 | 136 |
MS.gene039287.t1 | MTR_5g005690 | 25.786 | 477 | 289 | 12 | 31 | 457 | 26 | 487 | 2.97e-31 | 125 |
MS.gene039287.t1 | MTR_5g007090 | 27.879 | 495 | 261 | 20 | 1 | 447 | 10 | 456 | 8.74e-31 | 124 |
MS.gene039287.t1 | MTR_1g115245 | 31.208 | 298 | 181 | 9 | 19 | 307 | 20 | 302 | 9.87e-29 | 115 |
MS.gene039287.t1 | MTR_4g080590 | 27.610 | 431 | 294 | 12 | 25 | 447 | 22 | 442 | 2.44e-28 | 117 |
MS.gene039287.t1 | MTR_8g006910 | 28.155 | 412 | 246 | 16 | 24 | 414 | 50 | 432 | 6.91e-27 | 113 |
MS.gene039287.t1 | MTR_4g080787 | 26.250 | 480 | 272 | 18 | 26 | 458 | 19 | 463 | 1.54e-25 | 109 |
MS.gene039287.t1 | MTR_5g007130 | 26.580 | 459 | 233 | 14 | 31 | 459 | 20 | 404 | 1.15e-24 | 105 |
MS.gene039287.t1 | MTR_3g048290 | 25.690 | 471 | 287 | 14 | 26 | 460 | 23 | 466 | 3.94e-24 | 105 |
MS.gene039287.t1 | MTR_7g023310 | 25.532 | 423 | 274 | 13 | 24 | 424 | 24 | 427 | 3.52e-22 | 99.4 |
MS.gene039287.t1 | MTR_5g063450 | 29.930 | 284 | 154 | 11 | 25 | 296 | 26 | 276 | 6.66e-21 | 94.4 |
MS.gene039287.t1 | MTR_4g032730 | 25.253 | 495 | 282 | 20 | 19 | 458 | 5 | 466 | 1.01e-20 | 94.7 |
MS.gene039287.t1 | MTR_5g039950 | 25.166 | 453 | 265 | 17 | 25 | 458 | 22 | 419 | 4.34e-20 | 92.4 |
MS.gene039287.t1 | MTR_4g080773 | 25.056 | 447 | 256 | 17 | 26 | 424 | 19 | 434 | 4.60e-20 | 93.2 |
MS.gene039287.t1 | MTR_4g080773 | 25.056 | 447 | 256 | 17 | 26 | 424 | 19 | 434 | 4.89e-20 | 93.2 |
MS.gene039287.t1 | MTR_3g018680 | 25.178 | 421 | 222 | 16 | 24 | 424 | 20 | 367 | 1.51e-19 | 90.9 |
MS.gene039287.t1 | MTR_2g072710 | 28.877 | 187 | 115 | 5 | 279 | 460 | 22 | 195 | 2.64e-19 | 86.3 |
MS.gene039287.t1 | MTR_5g084070 | 23.423 | 444 | 293 | 12 | 22 | 451 | 9 | 419 | 2.65e-18 | 87.4 |
MS.gene039287.t1 | MTR_4g081030 | 27.439 | 328 | 211 | 9 | 25 | 344 | 16 | 324 | 4.87e-18 | 86.3 |
MS.gene039287.t1 | MTR_4g080590 | 26.374 | 364 | 250 | 12 | 25 | 381 | 22 | 374 | 1.75e-16 | 81.3 |
MS.gene039287.t1 | MTR_1g013560 | 25.287 | 435 | 251 | 17 | 22 | 424 | 15 | 407 | 2.66e-16 | 81.3 |
MS.gene039287.t1 | MTR_8g062270 | 25.000 | 464 | 291 | 22 | 26 | 458 | 16 | 453 | 1.04e-15 | 79.3 |
MS.gene039287.t1 | MTR_2g007450 | 20.335 | 477 | 293 | 14 | 13 | 460 | 3 | 421 | 3.74e-15 | 77.8 |
MS.gene039287.t1 | MTR_0049s0110 | 24.893 | 466 | 261 | 20 | 26 | 458 | 8 | 417 | 5.41e-15 | 77.0 |
MS.gene039287.t1 | MTR_8g468810 | 22.912 | 467 | 313 | 17 | 18 | 458 | 17 | 462 | 1.98e-14 | 75.5 |
MS.gene039287.t1 | MTR_5g058100 | 23.348 | 454 | 264 | 16 | 19 | 459 | 2 | 384 | 2.29e-14 | 75.1 |
MS.gene039287.t1 | MTR_8g467800 | 22.458 | 472 | 288 | 17 | 26 | 458 | 20 | 452 | 4.27e-14 | 74.7 |
MS.gene039287.t1 | MTR_8g014160 | 23.992 | 471 | 249 | 21 | 18 | 458 | 33 | 424 | 4.82e-14 | 74.3 |
MS.gene039287.t1 | MTR_5g007110 | 35.780 | 109 | 68 | 2 | 338 | 446 | 2 | 108 | 1.18e-13 | 67.8 |
MS.gene039287.t1 | MTR_8g062080 | 24.632 | 475 | 281 | 17 | 23 | 464 | 20 | 450 | 4.39e-13 | 71.2 |
MS.gene039287.t1 | MTR_3g105060 | 35.211 | 142 | 79 | 5 | 26 | 161 | 14 | 148 | 5.51e-13 | 70.5 |
MS.gene039287.t1 | MTR_7g115270 | 22.319 | 457 | 260 | 16 | 26 | 456 | 12 | 399 | 6.59e-13 | 70.5 |
MS.gene039287.t1 | MTR_1g013560 | 26.575 | 365 | 208 | 15 | 22 | 364 | 15 | 341 | 7.31e-13 | 70.1 |
MS.gene039287.t1 | MTR_5g073370 | 24.944 | 445 | 254 | 19 | 26 | 459 | 5 | 380 | 1.62e-12 | 69.3 |
MS.gene039287.t1 | MTR_1g016310 | 27.149 | 221 | 132 | 8 | 20 | 213 | 14 | 232 | 2.47e-12 | 68.2 |
MS.gene039287.t1 | MTR_1g016310 | 27.149 | 221 | 132 | 8 | 20 | 213 | 14 | 232 | 2.72e-12 | 68.9 |
MS.gene039287.t1 | MTR_7g094050 | 34.959 | 123 | 77 | 2 | 326 | 447 | 2 | 122 | 3.86e-12 | 63.9 |
MS.gene039287.t1 | MTR_2g047858 | 25.000 | 176 | 127 | 3 | 22 | 192 | 111 | 286 | 1.37e-11 | 67.0 |
MS.gene039287.t1 | MTR_3g107160 | 31.757 | 148 | 89 | 3 | 20 | 159 | 4 | 147 | 1.47e-11 | 66.2 |
MS.gene039287.t1 | MTR_2g007500 | 30.714 | 140 | 78 | 3 | 26 | 162 | 14 | 137 | 1.85e-11 | 65.5 |
MS.gene039287.t1 | MTR_0049s0110 | 26.536 | 358 | 197 | 16 | 26 | 364 | 8 | 318 | 2.97e-11 | 65.1 |
MS.gene039287.t1 | MTR_7g032380 | 30.178 | 169 | 99 | 7 | 26 | 184 | 11 | 170 | 3.85e-11 | 64.7 |
MS.gene039287.t1 | MTR_0049s0110 | 26.536 | 358 | 197 | 16 | 26 | 364 | 8 | 318 | 4.47e-11 | 64.7 |
MS.gene039287.t1 | MTR_4g098590 | 27.500 | 200 | 122 | 7 | 28 | 211 | 1 | 193 | 4.92e-11 | 64.7 |
MS.gene039287.t1 | MTR_2g082860 | 39.130 | 92 | 49 | 3 | 25 | 110 | 26 | 116 | 5.10e-11 | 60.5 |
MS.gene039287.t1 | MTR_7g023330 | 27.897 | 233 | 151 | 8 | 204 | 424 | 139 | 366 | 6.96e-11 | 64.3 |
MS.gene039287.t1 | MTR_0049s0110 | 34.437 | 151 | 90 | 7 | 26 | 172 | 8 | 153 | 7.39e-11 | 63.2 |
MS.gene039287.t1 | MTR_1g016340 | 24.036 | 441 | 263 | 18 | 17 | 424 | 11 | 412 | 7.47e-11 | 64.3 |
MS.gene039287.t1 | MTR_1g016340 | 24.036 | 441 | 263 | 18 | 17 | 424 | 6 | 407 | 9.04e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene039287.t1 | AT3G14710 | 28.541 | 473 | 284 | 13 | 8 | 458 | 1 | 441 | 9.78e-40 | 149 |
MS.gene039287.t1 | AT4G10400 | 25.225 | 444 | 286 | 13 | 26 | 459 | 2 | 409 | 1.61e-22 | 99.8 |
MS.gene039287.t1 | AT4G10400 | 25.225 | 444 | 286 | 13 | 26 | 459 | 2 | 409 | 1.61e-22 | 99.8 |
MS.gene039287.t1 | AT4G10400 | 25.225 | 444 | 286 | 13 | 26 | 459 | 2 | 409 | 1.61e-22 | 99.8 |
MS.gene039287.t1 | AT3G03030 | 25.926 | 432 | 281 | 15 | 26 | 424 | 2 | 427 | 1.91e-21 | 97.1 |
MS.gene039287.t1 | AT5G22730 | 25.319 | 470 | 299 | 17 | 18 | 456 | 15 | 463 | 7.38e-21 | 95.5 |
MS.gene039287.t1 | AT5G22730 | 25.319 | 470 | 299 | 17 | 18 | 456 | 15 | 463 | 7.38e-21 | 95.5 |
MS.gene039287.t1 | AT4G14096 | 28.062 | 449 | 269 | 18 | 23 | 442 | 5 | 428 | 7.40e-21 | 95.5 |
MS.gene039287.t1 | AT4G14096 | 28.062 | 449 | 269 | 18 | 23 | 442 | 5 | 428 | 7.40e-21 | 95.5 |
MS.gene039287.t1 | AT3G59200 | 24.628 | 471 | 303 | 15 | 25 | 457 | 6 | 462 | 1.86e-19 | 91.3 |
MS.gene039287.t1 | AT4G14103 | 26.027 | 438 | 267 | 15 | 23 | 442 | 5 | 403 | 2.47e-19 | 90.5 |
MS.gene039287.t1 | AT4G14103 | 27.095 | 358 | 239 | 12 | 23 | 366 | 5 | 354 | 6.11e-19 | 89.0 |
MS.gene039287.t1 | AT4G14103 | 27.095 | 358 | 239 | 12 | 23 | 366 | 5 | 354 | 6.11e-19 | 89.0 |
MS.gene039287.t1 | AT2G42730 | 25.847 | 472 | 285 | 20 | 25 | 457 | 4 | 449 | 7.17e-19 | 89.4 |
MS.gene039287.t1 | AT1G66310 | 24.847 | 491 | 275 | 22 | 8 | 456 | 1 | 439 | 1.17e-18 | 88.6 |
MS.gene039287.t1 | AT3G59200 | 26.016 | 369 | 235 | 10 | 25 | 366 | 6 | 363 | 1.92e-18 | 87.0 |
MS.gene039287.t1 | AT5G38590 | 25.485 | 412 | 264 | 12 | 26 | 424 | 2 | 383 | 4.16e-18 | 86.7 |
MS.gene039287.t1 | AT3G59230 | 26.141 | 482 | 292 | 19 | 23 | 457 | 9 | 473 | 6.88e-18 | 86.7 |
MS.gene039287.t1 | AT4G26340 | 25.301 | 415 | 267 | 11 | 26 | 425 | 2 | 388 | 7.23e-18 | 85.9 |
MS.gene039287.t1 | AT3G03030 | 26.433 | 314 | 203 | 11 | 26 | 316 | 2 | 310 | 1.68e-17 | 84.0 |
MS.gene039287.t1 | AT3G59240 | 27.115 | 461 | 285 | 18 | 25 | 452 | 7 | 449 | 4.67e-17 | 84.0 |
MS.gene039287.t1 | AT3G58930 | 25.734 | 443 | 274 | 18 | 26 | 424 | 2 | 433 | 1.24e-16 | 82.4 |
MS.gene039287.t1 | AT3G58930 | 25.734 | 443 | 274 | 18 | 26 | 424 | 2 | 433 | 1.24e-16 | 82.4 |
MS.gene039287.t1 | AT3G58930 | 25.734 | 443 | 274 | 18 | 26 | 424 | 2 | 433 | 1.24e-16 | 82.4 |
MS.gene039287.t1 | AT2G26030 | 22.529 | 435 | 275 | 18 | 26 | 426 | 4 | 410 | 1.62e-16 | 82.0 |
MS.gene039287.t1 | AT2G26030 | 22.529 | 435 | 275 | 18 | 26 | 426 | 4 | 410 | 1.62e-16 | 82.0 |
MS.gene039287.t1 | AT2G26030 | 22.273 | 440 | 275 | 18 | 26 | 426 | 4 | 415 | 1.73e-16 | 82.0 |
MS.gene039287.t1 | AT3G60040 | 28.042 | 378 | 218 | 15 | 25 | 369 | 12 | 368 | 2.99e-16 | 81.6 |
MS.gene039287.t1 | AT3G60040 | 28.042 | 378 | 218 | 15 | 25 | 369 | 229 | 585 | 3.70e-16 | 81.6 |
MS.gene039287.t1 | AT3G60040 | 28.042 | 378 | 218 | 15 | 25 | 369 | 231 | 587 | 3.77e-16 | 81.6 |
MS.gene039287.t1 | AT2G29930 | 24.632 | 475 | 294 | 20 | 23 | 458 | 9 | 458 | 3.99e-16 | 80.9 |
MS.gene039287.t1 | AT2G29930 | 24.632 | 475 | 294 | 20 | 23 | 458 | 9 | 458 | 3.99e-16 | 80.9 |
MS.gene039287.t1 | AT3G60040 | 28.042 | 378 | 218 | 15 | 25 | 369 | 231 | 587 | 4.07e-16 | 81.6 |
MS.gene039287.t1 | AT1G16930 | 23.517 | 489 | 291 | 16 | 8 | 456 | 1 | 446 | 4.15e-16 | 80.9 |
MS.gene039287.t1 | AT1G16930 | 23.517 | 489 | 291 | 16 | 8 | 456 | 1 | 446 | 4.15e-16 | 80.9 |
MS.gene039287.t1 | AT1G16930 | 23.517 | 489 | 291 | 16 | 8 | 456 | 1 | 446 | 4.15e-16 | 80.9 |
MS.gene039287.t1 | AT3G60040 | 28.042 | 378 | 218 | 15 | 25 | 369 | 232 | 588 | 4.33e-16 | 81.6 |
MS.gene039287.t1 | AT2G29910 | 29.596 | 223 | 139 | 7 | 23 | 240 | 2 | 211 | 4.46e-16 | 79.7 |
MS.gene039287.t1 | AT2G29910 | 29.596 | 223 | 139 | 7 | 23 | 240 | 2 | 211 | 4.46e-16 | 79.7 |
MS.gene039287.t1 | AT1G69630 | 25.403 | 496 | 272 | 21 | 9 | 456 | 3 | 448 | 6.51e-16 | 80.1 |
MS.gene039287.t1 | AT2G29910 | 29.596 | 223 | 139 | 7 | 23 | 240 | 2 | 211 | 6.83e-16 | 79.3 |
MS.gene039287.t1 | AT2G29910 | 29.596 | 223 | 139 | 7 | 23 | 240 | 2 | 211 | 6.83e-16 | 79.3 |
MS.gene039287.t1 | AT2G29910 | 29.596 | 223 | 139 | 7 | 23 | 240 | 2 | 211 | 6.83e-16 | 79.3 |
MS.gene039287.t1 | AT2G29910 | 29.596 | 223 | 139 | 7 | 23 | 240 | 2 | 211 | 6.83e-16 | 79.3 |
MS.gene039287.t1 | AT2G29910 | 29.596 | 223 | 139 | 7 | 23 | 240 | 26 | 235 | 8.11e-16 | 79.3 |
MS.gene039287.t1 | AT4G09920 | 30.645 | 186 | 118 | 4 | 26 | 207 | 2 | 180 | 9.54e-16 | 78.2 |
MS.gene039287.t1 | AT4G09920 | 30.645 | 186 | 118 | 4 | 26 | 207 | 2 | 180 | 9.54e-16 | 78.2 |
MS.gene039287.t1 | AT4G09920 | 30.645 | 186 | 118 | 4 | 26 | 207 | 2 | 180 | 9.54e-16 | 78.2 |
MS.gene039287.t1 | AT4G09920 | 30.645 | 186 | 118 | 4 | 26 | 207 | 2 | 180 | 1.04e-15 | 78.2 |
MS.gene039287.t1 | AT4G09920 | 30.645 | 186 | 118 | 4 | 26 | 207 | 2 | 180 | 1.04e-15 | 78.2 |
MS.gene039287.t1 | AT4G00160 | 24.295 | 461 | 288 | 15 | 25 | 458 | 15 | 441 | 1.61e-15 | 79.0 |
MS.gene039287.t1 | AT3G58940 | 26.753 | 385 | 204 | 17 | 26 | 372 | 2 | 346 | 1.96e-15 | 79.3 |
MS.gene039287.t1 | AT3G58940 | 26.753 | 385 | 204 | 17 | 26 | 372 | 2 | 346 | 1.96e-15 | 79.3 |
MS.gene039287.t1 | AT3G49030 | 25.054 | 459 | 289 | 17 | 24 | 461 | 19 | 443 | 2.99e-15 | 78.2 |
MS.gene039287.t1 | AT3G26922 | 26.901 | 171 | 118 | 2 | 26 | 194 | 14 | 179 | 3.78e-15 | 76.6 |
MS.gene039287.t1 | AT3G26922 | 26.901 | 171 | 118 | 2 | 26 | 194 | 14 | 179 | 3.78e-15 | 76.6 |
MS.gene039287.t1 | AT1G52650 | 26.136 | 440 | 263 | 18 | 26 | 426 | 2 | 418 | 5.31e-15 | 77.4 |
MS.gene039287.t1 | AT1G48400 | 33.333 | 147 | 92 | 3 | 25 | 165 | 9 | 155 | 1.12e-14 | 76.6 |
MS.gene039287.t1 | AT1G48400 | 33.333 | 147 | 92 | 3 | 25 | 165 | 9 | 155 | 1.18e-14 | 76.6 |
MS.gene039287.t1 | AT1G55030 | 24.053 | 449 | 289 | 18 | 26 | 458 | 19 | 431 | 1.60e-14 | 75.9 |
MS.gene039287.t1 | AT1G55030 | 24.053 | 449 | 289 | 18 | 26 | 458 | 9 | 421 | 1.97e-14 | 75.5 |
MS.gene039287.t1 | AT4G13960 | 26.087 | 368 | 226 | 12 | 26 | 366 | 2 | 350 | 2.02e-14 | 75.5 |
MS.gene039287.t1 | AT4G13960 | 26.087 | 368 | 226 | 12 | 26 | 366 | 2 | 350 | 2.02e-14 | 75.5 |
MS.gene039287.t1 | AT3G49150 | 32.000 | 175 | 110 | 6 | 20 | 188 | 10 | 181 | 4.40e-14 | 74.7 |
MS.gene039287.t1 | AT5G35995 | 24.187 | 492 | 278 | 20 | 23 | 458 | 2 | 454 | 5.02e-14 | 74.3 |
MS.gene039287.t1 | AT5G35995 | 24.187 | 492 | 278 | 20 | 23 | 458 | 2 | 454 | 5.02e-14 | 74.3 |
MS.gene039287.t1 | AT1G78760 | 24.066 | 482 | 264 | 25 | 23 | 456 | 13 | 440 | 5.34e-14 | 74.3 |
MS.gene039287.t1 | AT5G56560 | 22.472 | 445 | 297 | 14 | 28 | 458 | 7 | 417 | 5.97e-14 | 73.9 |
MS.gene039287.t1 | AT1G06630 | 27.100 | 369 | 226 | 15 | 23 | 369 | 9 | 356 | 1.67e-13 | 72.4 |
MS.gene039287.t1 | AT1G06630 | 27.100 | 369 | 226 | 15 | 23 | 369 | 9 | 356 | 1.67e-13 | 72.4 |
MS.gene039287.t1 | AT1G06630 | 27.100 | 369 | 226 | 15 | 23 | 369 | 9 | 356 | 1.67e-13 | 72.4 |
MS.gene039287.t1 | AT1G06630 | 27.100 | 369 | 226 | 15 | 23 | 369 | 9 | 356 | 1.67e-13 | 72.4 |
MS.gene039287.t1 | AT4G27050 | 24.286 | 490 | 277 | 21 | 24 | 458 | 2 | 452 | 1.96e-13 | 72.4 |
MS.gene039287.t1 | AT4G27050 | 24.286 | 490 | 277 | 21 | 24 | 458 | 2 | 452 | 1.96e-13 | 72.4 |
MS.gene039287.t1 | AT4G27050 | 24.286 | 490 | 277 | 21 | 24 | 458 | 2 | 452 | 1.96e-13 | 72.4 |
MS.gene039287.t1 | AT4G27050 | 24.286 | 490 | 277 | 21 | 24 | 458 | 2 | 452 | 1.96e-13 | 72.4 |
MS.gene039287.t1 | AT4G27050 | 24.286 | 490 | 277 | 21 | 24 | 458 | 2 | 452 | 1.96e-13 | 72.4 |
MS.gene039287.t1 | AT1G06630 | 27.100 | 369 | 226 | 15 | 23 | 369 | 18 | 365 | 2.01e-13 | 72.4 |
MS.gene039287.t1 | AT1G06630 | 27.100 | 369 | 226 | 15 | 23 | 369 | 9 | 356 | 2.12e-13 | 72.4 |
MS.gene039287.t1 | AT3G03040 | 25.137 | 366 | 239 | 15 | 26 | 366 | 2 | 357 | 2.68e-13 | 72.0 |
MS.gene039287.t1 | AT1G06630 | 31.395 | 172 | 110 | 4 | 23 | 186 | 9 | 180 | 3.01e-13 | 70.9 |
MS.gene039287.t1 | AT1G06630 | 26.648 | 364 | 226 | 14 | 23 | 366 | 9 | 351 | 3.93e-13 | 70.9 |
MS.gene039287.t1 | AT1G06630 | 26.648 | 364 | 226 | 14 | 23 | 366 | 9 | 351 | 3.93e-13 | 70.9 |
MS.gene039287.t1 | AT1G58310 | 25.203 | 492 | 299 | 17 | 25 | 458 | 7 | 487 | 5.31e-13 | 71.2 |
MS.gene039287.t1 | AT4G10420 | 25.215 | 349 | 221 | 10 | 123 | 459 | 2 | 322 | 5.66e-13 | 70.1 |
MS.gene039287.t1 | AT4G26350 | 29.143 | 175 | 110 | 5 | 26 | 194 | 2 | 168 | 6.45e-13 | 70.9 |
MS.gene039287.t1 | AT5G56380 | 22.807 | 456 | 312 | 15 | 26 | 459 | 2 | 439 | 6.87e-13 | 70.9 |
MS.gene039287.t1 | AT5G56380 | 22.807 | 456 | 312 | 15 | 26 | 459 | 2 | 439 | 6.87e-13 | 70.9 |
MS.gene039287.t1 | AT3G59190 | 27.528 | 178 | 119 | 5 | 17 | 186 | 3 | 178 | 6.97e-13 | 70.5 |
MS.gene039287.t1 | AT3G52680 | 22.103 | 466 | 290 | 15 | 25 | 458 | 20 | 444 | 8.89e-13 | 70.5 |
MS.gene039287.t1 | AT3G49040 | 27.556 | 225 | 128 | 7 | 26 | 234 | 17 | 222 | 1.24e-12 | 68.9 |
MS.gene039287.t1 | AT3G59190 | 27.907 | 172 | 114 | 5 | 23 | 186 | 9 | 178 | 1.27e-12 | 70.1 |
MS.gene039287.t1 | AT5G38392 | 31.544 | 149 | 91 | 4 | 26 | 165 | 2 | 148 | 1.48e-12 | 67.4 |
MS.gene039287.t1 | AT2G26860 | 24.299 | 428 | 264 | 15 | 26 | 425 | 2 | 397 | 1.99e-12 | 69.3 |
MS.gene039287.t1 | AT2G26860 | 24.299 | 428 | 264 | 15 | 26 | 425 | 2 | 397 | 1.99e-12 | 69.3 |
MS.gene039287.t1 | AT3G59170 | 24.056 | 503 | 271 | 23 | 25 | 458 | 6 | 466 | 2.43e-12 | 69.3 |
MS.gene039287.t1 | AT4G13965 | 23.529 | 408 | 271 | 12 | 26 | 421 | 10 | 388 | 2.50e-12 | 68.9 |
MS.gene039287.t1 | AT5G41630 | 28.177 | 181 | 113 | 6 | 23 | 188 | 9 | 187 | 2.77e-12 | 68.9 |
MS.gene039287.t1 | AT3G49030 | 27.315 | 216 | 144 | 5 | 24 | 234 | 19 | 226 | 4.33e-12 | 68.2 |
MS.gene039287.t1 | AT5G44980 | 23.256 | 430 | 281 | 15 | 24 | 428 | 2 | 407 | 6.52e-12 | 67.8 |
MS.gene039287.t1 | AT5G44980 | 23.256 | 430 | 281 | 15 | 24 | 428 | 2 | 407 | 6.52e-12 | 67.8 |
MS.gene039287.t1 | AT4G22280 | 23.318 | 446 | 294 | 14 | 26 | 458 | 2 | 412 | 7.75e-12 | 67.4 |
MS.gene039287.t1 | AT3G50710 | 21.786 | 459 | 295 | 17 | 26 | 456 | 2 | 424 | 8.99e-12 | 67.4 |
MS.gene039287.t1 | AT5G56440 | 33.140 | 172 | 102 | 7 | 26 | 191 | 2 | 166 | 9.08e-12 | 67.4 |
MS.gene039287.t1 | AT3G42770 | 24.729 | 461 | 278 | 20 | 28 | 457 | 1 | 423 | 9.37e-12 | 67.4 |
MS.gene039287.t1 | AT5G56410 | 23.434 | 431 | 267 | 17 | 33 | 427 | 10 | 413 | 1.04e-11 | 67.4 |
MS.gene039287.t1 | AT3G58930 | 24.598 | 435 | 255 | 17 | 26 | 424 | 2 | 399 | 1.33e-11 | 66.6 |
MS.gene039287.t1 | AT3G58930 | 24.598 | 435 | 255 | 17 | 26 | 424 | 2 | 399 | 1.33e-11 | 66.6 |
MS.gene039287.t1 | AT1G64540 | 24.528 | 477 | 280 | 21 | 25 | 458 | 4 | 443 | 1.34e-11 | 66.6 |
MS.gene039287.t1 | AT1G64540 | 24.528 | 477 | 280 | 21 | 25 | 458 | 4 | 443 | 1.34e-11 | 66.6 |
MS.gene039287.t1 | AT5G38590 | 28.037 | 214 | 143 | 4 | 26 | 236 | 2 | 207 | 1.77e-11 | 65.5 |
MS.gene039287.t1 | AT5G38396 | 23.641 | 368 | 242 | 11 | 26 | 366 | 2 | 357 | 1.92e-11 | 66.2 |
MS.gene039287.t1 | AT4G10410 | 32.192 | 146 | 95 | 1 | 40 | 185 | 1 | 142 | 2.08e-11 | 64.7 |
MS.gene039287.t1 | AT3G58880 | 25.067 | 371 | 234 | 15 | 26 | 370 | 3 | 355 | 3.92e-11 | 65.5 |
MS.gene039287.t1 | AT3G58860 | 23.729 | 354 | 240 | 13 | 26 | 366 | 7 | 343 | 4.12e-11 | 65.5 |
MS.gene039287.t1 | AT3G26922 | 24.516 | 155 | 110 | 2 | 42 | 194 | 1 | 150 | 4.37e-11 | 63.9 |
MS.gene039287.t1 | AT3G26922 | 24.516 | 155 | 110 | 2 | 42 | 194 | 1 | 150 | 4.37e-11 | 63.9 |
MS.gene039287.t1 | AT5G56690 | 26.168 | 214 | 148 | 6 | 28 | 235 | 4 | 213 | 4.69e-11 | 65.1 |
MS.gene039287.t1 | AT5G02920 | 30.769 | 195 | 112 | 8 | 26 | 215 | 28 | 204 | 6.64e-11 | 63.2 |
MS.gene039287.t1 | AT5G22730 | 25.132 | 378 | 239 | 14 | 18 | 367 | 15 | 376 | 6.78e-11 | 64.3 |
MS.gene039287.t1 | AT5G53640 | 25.694 | 144 | 101 | 1 | 18 | 161 | 14 | 151 | 8.23e-11 | 62.4 |
MS.gene039287.t1 | AT5G44950 | 23.095 | 433 | 274 | 19 | 25 | 426 | 3 | 407 | 9.52e-11 | 63.9 |
MS.gene039287.t1 | AT5G41830 | 28.070 | 171 | 102 | 5 | 22 | 171 | 9 | 179 | 9.64e-11 | 64.3 |
Find 53 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCAATCTTTAGATTGATTA+TGG | 0.175935 | 2.2:+20197602 | None:intergenic |
AACTCTCCTTTCTAAGATAA+AGG | 0.259318 | 2.2:+20197419 | None:intergenic |
GCATCGACTATAAACCTTAA+TGG | 0.263797 | 2.2:+20197050 | None:intergenic |
CCAAACTTCAATCCAACTTC+TGG | 0.268395 | 2.2:+20197629 | None:intergenic |
ATCATGTAAATATGCCATTA+AGG | 0.269665 | 2.2:-20197064 | MS.gene039287:CDS |
ACATTACATGAAAGCATTCT+TGG | 0.297529 | 2.2:-20197705 | MS.gene039287:CDS |
CCAGAAGTTGGATTGAAGTT+TGG | 0.300897 | 2.2:-20197629 | MS.gene039287:CDS |
AAACAAGAGTATTAAGAATT+GGG | 0.310703 | 2.2:+20196631 | None:intergenic |
AAAACAAGAGTATTAAGAAT+TGG | 0.321700 | 2.2:+20196630 | None:intergenic |
TGTTGTTGATGAAGATAAAA+AGG | 0.327183 | 2.2:-20196941 | MS.gene039287:CDS |
TTCACCAATCTGCCTGTCTT+TGG | 0.335476 | 2.2:-20196720 | MS.gene039287:CDS |
CCTTCTGTTGTTTCACCTGA+TGG | 0.356513 | 2.2:+20197747 | None:intergenic |
GCGATATGAAGATATTGATT+TGG | 0.364051 | 2.2:-20196032 | MS.gene039287:CDS |
GGATTTGAACAATGCAACTA+TGG | 0.365906 | 2.2:-20197790 | MS.gene039287:CDS |
AAGCTAATGTTCTGTGTTGT+TGG | 0.374573 | 2.2:+20197144 | None:intergenic |
CTTAACAGATTTCTCATATG+AGG | 0.389788 | 2.2:-20197028 | MS.gene039287:CDS |
TACATGATTTATTTGAATGA+TGG | 0.398273 | 2.2:+20197079 | None:intergenic |
AATGCGAAAGAGTATGATCT+TGG | 0.402234 | 2.2:-20196124 | MS.gene039287:CDS |
TTAAGCAAAGAGAGAAACTT+TGG | 0.410637 | 2.2:+20197484 | None:intergenic |
GCTTCAAACACTTTGAGAAT+CGG | 0.411946 | 2.2:+20197183 | None:intergenic |
CTTCAAACACTTTGAGAATC+GGG | 0.419619 | 2.2:+20197184 | None:intergenic |
GTGCTAACCGCGTCTATGAT+TGG | 0.420698 | 2.2:+20197663 | None:intergenic |
AAGATTGATGATAGTTTGCT+TGG | 0.424937 | 2.2:-20197588 | MS.gene039287:CDS |
CCTTCCAAAGACAGGCAGAT+TGG | 0.430732 | 2.2:+20196716 | None:intergenic |
CTAGCATTCTATCCAGAAGT+TGG | 0.443558 | 2.2:-20197641 | MS.gene039287:CDS |
GGATTTCCTTTATCTTAGAA+AGG | 0.446472 | 2.2:-20197425 | MS.gene039287:CDS |
CTCAAAGTGTTTGAAGCTAG+AGG | 0.446938 | 2.2:-20197177 | MS.gene039287:CDS |
GAAAGAGTATGATCTTGGTT+TGG | 0.459333 | 2.2:-20196119 | MS.gene039287:CDS |
CTGTTGTTTCACCTGATGGA+AGG | 0.467906 | 2.2:+20197751 | None:intergenic |
TAGTTTGCTTGGTTCTAAGA+AGG | 0.491339 | 2.2:-20197577 | MS.gene039287:CDS |
ATTGAAAACTTCTCAAGTAA+AGG | 0.498014 | 2.2:+20197114 | None:intergenic |
TTTAAGACAAATCGATGAAG+TGG | 0.500710 | 2.2:-20196881 | MS.gene039287:CDS |
TAAGTTAACCTTCCAAAGAC+AGG | 0.506614 | 2.2:+20196708 | None:intergenic |
TAAGAAGGAAAAGATGCAAA+AGG | 0.508260 | 2.2:-20197562 | MS.gene039287:CDS |
GAAACAAAACACCTTCCATC+AGG | 0.516491 | 2.2:-20197762 | MS.gene039287:CDS |
AACTTATCTGCAACTAAATG+AGG | 0.518407 | 2.2:-20196691 | MS.gene039287:CDS |
CCAATCTGCCTGTCTTTGGA+AGG | 0.521176 | 2.2:-20196716 | MS.gene039287:CDS |
TATTAAGAATTGGGGAATTG+CGG | 0.526660 | 2.2:+20196640 | None:intergenic |
GTTGGAAAATGCAGCAATGT+TGG | 0.535430 | 2.2:-20196086 | MS.gene039287:CDS |
AACAAGAGTATTAAGAATTG+GGG | 0.542817 | 2.2:+20196632 | None:intergenic |
TGGTTTGGTTAAATTCATGT+TGG | 0.555114 | 2.2:-20196104 | MS.gene039287:CDS |
TTAACAGATTTCTCATATGA+GGG | 0.557255 | 2.2:-20197027 | MS.gene039287:CDS |
AAGGACAGAATGGAAGAACT+TGG | 0.560909 | 2.2:-20196922 | MS.gene039287:CDS |
ATGCATCTCAGATAAGTGAA+TGG | 0.564518 | 2.2:-20197446 | MS.gene039287:CDS |
CTGCAACTAAATGAGGTCAC+TGG | 0.573768 | 2.2:-20196684 | MS.gene039287:CDS |
TCAAAGTGTTTGAAGCTAGA+GGG | 0.585679 | 2.2:-20197176 | MS.gene039287:CDS |
TTGCAATAGTTAGAACACCT+TGG | 0.610190 | 2.2:+20195980 | None:intergenic |
TTGAAGCTAGAGGGTGCGAA+TGG | 0.623897 | 2.2:-20197167 | MS.gene039287:CDS |
GGAGAAGATGATGATATCGC+TGG | 0.630933 | 2.2:-20196065 | MS.gene039287:CDS |
CCATCAGGTGAAACAACAGA+AGG | 0.638403 | 2.2:-20197747 | MS.gene039287:CDS |
AGCAGATACTCTCATTACCA+AGG | 0.666981 | 2.2:-20195997 | MS.gene039287:CDS |
ATTCATTCCAATCATAGACG+CGG | 0.694975 | 2.2:-20197670 | MS.gene039287:CDS |
AAGCTTGACAGAAAGCAGTG+AGG | 0.749319 | 2.2:+20196172 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTCTTTTATGATAGTTAAA+TGG | - | chr2.2:20196916-20196935 | MS.gene039287:CDS | 15.0% |
!! | ATCAATCTTTAGATTGATTA+TGG | + | chr2.2:20196142-20196161 | None:intergenic | 20.0% |
!! | TACATGATTTATTTGAATGA+TGG | + | chr2.2:20196665-20196684 | None:intergenic | 20.0% |
!!! | AAAACAAGAGTATTAAGAAT+TGG | + | chr2.2:20197114-20197133 | None:intergenic | 20.0% |
!!! | AAACAAGAGTATTAAGAATT+GGG | + | chr2.2:20197113-20197132 | None:intergenic | 20.0% |
!!! | AAGAAATTTAATGTCTTGTT+TGG | - | chr2.2:20197171-20197190 | MS.gene039287:CDS | 20.0% |
!!! | ACTGAAATTATTGTTTTACA+AGG | - | chr2.2:20196887-20196906 | MS.gene039287:CDS | 20.0% |
!!! | AGTTATATCTTTTGAACAAA+TGG | + | chr2.2:20196529-20196548 | None:intergenic | 20.0% |
!!! | ATTAAGTTGTTTTTTCAATC+AGG | - | chr2.2:20197438-20197457 | MS.gene039287:CDS | 20.0% |
!!! | GTTTTACTTAATGTAAGTTT+AGG | - | chr2.2:20197129-20197148 | MS.gene039287:CDS | 20.0% |
!!! | TATTGATTTGGAAAAAGTTA+AGG | - | chr2.2:20197721-20197740 | MS.gene039287:CDS | 20.0% |
!!! | TTAAGTTGTTTTTTCAATCA+GGG | - | chr2.2:20197439-20197458 | MS.gene039287:CDS | 20.0% |
! | ATCATGTAAATATGCCATTA+AGG | - | chr2.2:20196677-20196696 | MS.gene039287:CDS | 25.0% |
! | ATTGAAAACTTCTCAAGTAA+AGG | + | chr2.2:20196630-20196649 | None:intergenic | 25.0% |
! | TCATGATACACAAAATTTCA+GGG | - | chr2.2:20197503-20197522 | MS.gene039287:CDS | 25.0% |
! | TTAACAGATTTCTCATATGA+GGG | - | chr2.2:20196714-20196733 | MS.gene039287:CDS | 25.0% |
! | TTCAAAAACTTAGCATTTCT+GGG | - | chr2.2:20196481-20196500 | MS.gene039287:intron | 25.0% |
!! | AGAAGTTTTCAATAGCAATA+TGG | - | chr2.2:20196637-20196656 | MS.gene039287:CDS | 25.0% |
!! | TGTTGTTGATGAAGATAAAA+AGG | - | chr2.2:20196800-20196819 | MS.gene039287:intron | 25.0% |
!!! | AACAAGAGTATTAAGAATTG+GGG | + | chr2.2:20197112-20197131 | None:intergenic | 25.0% |
!!! | ATTTAATGTCTTGTTTGGAT+TGG | - | chr2.2:20197176-20197195 | MS.gene039287:CDS | 25.0% |
AACTTATCTGCAACTAAATG+AGG | - | chr2.2:20197050-20197069 | MS.gene039287:CDS | 30.0% | |
CTAGAATAGCTTACAAAAAC+AGG | - | chr2.2:20197310-20197329 | MS.gene039287:CDS | 30.0% | |
CTCATGATACACAAAATTTC+AGG | - | chr2.2:20197502-20197521 | MS.gene039287:CDS | 30.0% | |
CTTAACAGATTTCTCATATG+AGG | - | chr2.2:20196713-20196732 | MS.gene039287:CDS | 30.0% | |
CTTCAAAAACTTAGCATTTC+TGG | - | chr2.2:20196480-20196499 | MS.gene039287:intron | 30.0% | |
GATAGTTAAATGGCTATAGT+TGG | - | chr2.2:20196926-20196945 | MS.gene039287:CDS | 30.0% | |
GCTTAAAGTATAAGCACTTA+TGG | + | chr2.2:20197413-20197432 | None:intergenic | 30.0% | |
GCTTATTTGAACTGATCTAT+TGG | - | chr2.2:20197198-20197217 | MS.gene039287:CDS | 30.0% | |
GGATTTCCTTTATCTTAGAA+AGG | - | chr2.2:20196316-20196335 | MS.gene039287:intron | 30.0% | |
TAAAATTTCTCTTGTCTTGC+AGG | - | chr2.2:20196975-20196994 | MS.gene039287:CDS | 30.0% | |
TAAGAAGGAAAAGATGCAAA+AGG | - | chr2.2:20196179-20196198 | MS.gene039287:CDS | 30.0% | |
TATTAAGAATTGGGGAATTG+CGG | + | chr2.2:20197104-20197123 | None:intergenic | 30.0% | |
TGAAGATAAAAAGGACAGAA+TGG | - | chr2.2:20196809-20196828 | MS.gene039287:intron | 30.0% | |
TTAAGCAAAGAGAGAAACTT+TGG | + | chr2.2:20196260-20196279 | None:intergenic | 30.0% | |
! | AAGCTATTCTAGAGAACTTA+TGG | + | chr2.2:20197302-20197321 | None:intergenic | 30.0% |
! | CAGAAATGCTAAGTTTTTGA+AGG | + | chr2.2:20196482-20196501 | None:intergenic | 30.0% |
! | GCGATATGAAGATATTGATT+TGG | - | chr2.2:20197709-20197728 | MS.gene039287:CDS | 30.0% |
! | TTTAAGACAAATCGATGAAG+TGG | - | chr2.2:20196860-20196879 | MS.gene039287:CDS | 30.0% |
!! | AACTCTCCTTTCTAAGATAA+AGG | + | chr2.2:20196325-20196344 | None:intergenic | 30.0% |
!! | AAGATTGATGATAGTTTGCT+TGG | - | chr2.2:20196153-20196172 | MS.gene039287:CDS | 30.0% |
!! | ACATTACATGAAAGCATTCT+TGG | - | chr2.2:20196036-20196055 | MS.gene039287:CDS | 30.0% |
!! | TGCTAAGTTTTTGAAGGTTT+TGG | + | chr2.2:20196476-20196495 | None:intergenic | 30.0% |
!! | TGGTTTGGTTAAATTCATGT+TGG | - | chr2.2:20197637-20197656 | MS.gene039287:CDS | 30.0% |
!! | TTTTGGAGACAAACAGATAT+GGG | + | chr2.2:20196459-20196478 | None:intergenic | 30.0% |
AAGCTAATGTTCTGTGTTGT+TGG | + | chr2.2:20196600-20196619 | None:intergenic | 35.0% | |
ATGCATCTCAGATAAGTGAA+TGG | - | chr2.2:20196295-20196314 | MS.gene039287:intron | 35.0% | |
ATTCATTCCAATCATAGACG+CGG | - | chr2.2:20196071-20196090 | MS.gene039287:CDS | 35.0% | |
ATTGCAGCGAAAAAGTGAAT+CGG | + | chr2.2:20196391-20196410 | None:intergenic | 35.0% | |
GGATTTGAACAATGCAACTA+TGG | - | chr2.2:20195951-20195970 | MS.gene039287:CDS | 35.0% | |
TAAGTTAACCTTCCAAAGAC+AGG | + | chr2.2:20197036-20197055 | None:intergenic | 35.0% | |
TTGCAATAGTTAGAACACCT+TGG | + | chr2.2:20197764-20197783 | None:intergenic | 35.0% | |
! | AATGCGAAAGAGTATGATCT+TGG | - | chr2.2:20197617-20197636 | MS.gene039287:CDS | 35.0% |
! | CTTCAAACACTTTGAGAATC+GGG | + | chr2.2:20196560-20196579 | None:intergenic | 35.0% |
! | GAAAGAGTATGATCTTGGTT+TGG | - | chr2.2:20197622-20197641 | MS.gene039287:CDS | 35.0% |
! | GCTTCAAACACTTTGAGAAT+CGG | + | chr2.2:20196561-20196580 | None:intergenic | 35.0% |
! | TCAAAGTGTTTGAAGCTAGA+GGG | - | chr2.2:20196565-20196584 | MS.gene039287:intron | 35.0% |
!! | GCATCGACTATAAACCTTAA+TGG | + | chr2.2:20196694-20196713 | None:intergenic | 35.0% |
!! | TAGTTTGCTTGGTTCTAAGA+AGG | - | chr2.2:20196164-20196183 | MS.gene039287:CDS | 35.0% |
!!! | GTTTTGGAGACAAACAGATA+TGG | + | chr2.2:20196460-20196479 | None:intergenic | 35.0% |
AAGGACAGAATGGAAGAACT+TGG | - | chr2.2:20196819-20196838 | MS.gene039287:intron | 40.0% | |
AGCAGATACTCTCATTACCA+AGG | - | chr2.2:20197744-20197763 | MS.gene039287:CDS | 40.0% | |
CCAAACTTCAATCCAACTTC+TGG | + | chr2.2:20196115-20196134 | None:intergenic | 40.0% | |
CCAGAAGTTGGATTGAAGTT+TGG | - | chr2.2:20196112-20196131 | MS.gene039287:CDS | 40.0% | |
CTAGCATTCTATCCAGAAGT+TGG | - | chr2.2:20196100-20196119 | MS.gene039287:CDS | 40.0% | |
GAAAAAGTGAATCGGAAGGA+AGG | + | chr2.2:20196383-20196402 | None:intergenic | 40.0% | |
GAAACAAAACACCTTCCATC+AGG | - | chr2.2:20195979-20195998 | MS.gene039287:CDS | 40.0% | |
GTTGGAAAATGCAGCAATGT+TGG | - | chr2.2:20197655-20197674 | MS.gene039287:CDS | 40.0% | |
! | CTCAAAGTGTTTGAAGCTAG+AGG | - | chr2.2:20196564-20196583 | MS.gene039287:intron | 40.0% |
! | CTCTTGTCTTGCAGGTTTTA+AGG | - | chr2.2:20196983-20197002 | MS.gene039287:CDS | 40.0% |
!!! | TGATGATATCGCTGGCTTTT+TGG | - | chr2.2:20197684-20197703 | MS.gene039287:CDS | 40.0% |
AAGCTTGACAGAAAGCAGTG+AGG | + | chr2.2:20197572-20197591 | None:intergenic | 45.0% | |
CAGCGAAAAAGTGAATCGGA+AGG | + | chr2.2:20196387-20196406 | None:intergenic | 45.0% | |
CCATCAGGTGAAACAACAGA+AGG | - | chr2.2:20195994-20196013 | MS.gene039287:CDS | 45.0% | |
CTGCAACTAAATGAGGTCAC+TGG | - | chr2.2:20197057-20197076 | MS.gene039287:CDS | 45.0% | |
GGAGAAGATGATGATATCGC+TGG | - | chr2.2:20197676-20197695 | MS.gene039287:CDS | 45.0% | |
TTCACCAATCTGCCTGTCTT+TGG | - | chr2.2:20197021-20197040 | MS.gene039287:CDS | 45.0% | |
!! | CCTTCTGTTGTTTCACCTGA+TGG | + | chr2.2:20195997-20196016 | None:intergenic | 45.0% |
!! | CTGTTGTTTCACCTGATGGA+AGG | + | chr2.2:20195993-20196012 | None:intergenic | 45.0% |
!!! | GTCTTGCAGGTTTTAAGGCA+TGG | - | chr2.2:20196988-20197007 | MS.gene039287:CDS | 45.0% |
CCAATCTGCCTGTCTTTGGA+AGG | - | chr2.2:20197025-20197044 | MS.gene039287:CDS | 50.0% | |
CCTTCCAAAGACAGGCAGAT+TGG | + | chr2.2:20197028-20197047 | None:intergenic | 50.0% | |
GTGCTAACCGCGTCTATGAT+TGG | + | chr2.2:20196081-20196100 | None:intergenic | 50.0% | |
! | TTGAAGCTAGAGGGTGCGAA+TGG | - | chr2.2:20196574-20196593 | MS.gene039287:intron | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 20195949 | 20197814 | 20195949 | ID=MS.gene039287 |
chr2.2 | mRNA | 20195949 | 20197814 | 20195949 | ID=MS.gene039287.t1;Parent=MS.gene039287 |
chr2.2 | exon | 20196855 | 20197814 | 20196855 | ID=MS.gene039287.t1.exon1;Parent=MS.gene039287.t1 |
chr2.2 | CDS | 20196855 | 20197814 | 20196855 | ID=cds.MS.gene039287.t1;Parent=MS.gene039287.t1 |
chr2.2 | exon | 20196623 | 20196766 | 20196623 | ID=MS.gene039287.t1.exon2;Parent=MS.gene039287.t1 |
chr2.2 | CDS | 20196623 | 20196766 | 20196623 | ID=cds.MS.gene039287.t1;Parent=MS.gene039287.t1 |
chr2.2 | exon | 20195949 | 20196239 | 20195949 | ID=MS.gene039287.t1.exon3;Parent=MS.gene039287.t1 |
chr2.2 | CDS | 20195949 | 20196239 | 20195949 | ID=cds.MS.gene039287.t1;Parent=MS.gene039287.t1 |
Gene Sequence |
Protein sequence |