Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25297.t1 | XP_003628587.2 | 90.7 | 367 | 34 | 0 | 1 | 367 | 464 | 830 | 8.60E-190 | 672.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25297.t1 | Q9LV26 | 32.3 | 192 | 105 | 7 | 25 | 214 | 30 | 198 | 3.3e-12 | 74.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25297.t1 | G7LEM0 | 84.1 | 396 | 34 | 2 | 1 | 367 | 1 | 396 | 5.1e-184 | 653.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25297.t1 | MTR_8g062300 | 84.171 | 398 | 30 | 4 | 1 | 367 | 1 | 396 | 0.0 | 662 |
MS.gene25297.t1 | MTR_8g062080 | 51.491 | 369 | 147 | 10 | 5 | 358 | 4 | 355 | 7.15e-108 | 324 |
MS.gene25297.t1 | MTR_8g062310 | 51.420 | 352 | 152 | 8 | 16 | 367 | 15 | 347 | 1.93e-105 | 317 |
MS.gene25297.t1 | MTR_8g070950 | 52.394 | 376 | 147 | 10 | 1 | 367 | 1 | 353 | 8.27e-104 | 313 |
MS.gene25297.t1 | MTR_8g062010 | 53.714 | 350 | 145 | 9 | 26 | 367 | 9 | 349 | 2.07e-103 | 312 |
MS.gene25297.t1 | MTR_4g050250 | 46.024 | 415 | 164 | 14 | 7 | 377 | 1 | 399 | 1.33e-94 | 290 |
MS.gene25297.t1 | MTR_8g058965 | 45.802 | 393 | 166 | 10 | 13 | 374 | 2 | 378 | 4.45e-93 | 286 |
MS.gene25297.t1 | MTR_8g469020 | 44.882 | 381 | 164 | 11 | 26 | 374 | 7 | 373 | 1.66e-85 | 267 |
MS.gene25297.t1 | MTR_8g467790 | 45.304 | 362 | 139 | 10 | 25 | 367 | 147 | 468 | 1.57e-79 | 253 |
MS.gene25297.t1 | MTR_8g062270 | 41.011 | 356 | 174 | 13 | 23 | 353 | 13 | 357 | 1.20e-58 | 197 |
MS.gene25297.t1 | MTR_2g083840 | 39.779 | 362 | 189 | 12 | 24 | 366 | 19 | 370 | 2.48e-57 | 194 |
MS.gene25297.t1 | MTR_8g468810 | 39.062 | 384 | 191 | 15 | 5 | 359 | 3 | 372 | 3.84e-55 | 186 |
MS.gene25297.t1 | MTR_8g468810 | 38.903 | 383 | 191 | 15 | 5 | 358 | 3 | 371 | 2.56e-53 | 183 |
MS.gene25297.t1 | MTR_8g058970 | 37.629 | 388 | 198 | 13 | 10 | 358 | 3 | 385 | 2.73e-52 | 181 |
MS.gene25297.t1 | MTR_5g092960 | 35.696 | 381 | 208 | 10 | 9 | 362 | 4 | 374 | 9.95e-49 | 170 |
MS.gene25297.t1 | MTR_5g092960 | 35.185 | 378 | 209 | 9 | 9 | 359 | 4 | 372 | 1.32e-47 | 168 |
MS.gene25297.t1 | MTR_4g032730 | 36.066 | 366 | 203 | 10 | 13 | 358 | 2 | 356 | 2.65e-47 | 167 |
MS.gene25297.t1 | MTR_8g467800 | 37.600 | 375 | 201 | 11 | 1 | 358 | 1 | 359 | 3.21e-46 | 164 |
MS.gene25297.t1 | MTR_8g468840 | 36.415 | 357 | 194 | 10 | 26 | 359 | 14 | 360 | 2.59e-45 | 162 |
MS.gene25297.t1 | MTR_8g468810 | 40.196 | 306 | 148 | 13 | 5 | 288 | 3 | 295 | 5.00e-45 | 158 |
MS.gene25297.t1 | MTR_8g468810 | 40.196 | 306 | 148 | 13 | 5 | 288 | 3 | 295 | 5.71e-45 | 158 |
MS.gene25297.t1 | MTR_8g468810 | 40.196 | 306 | 148 | 13 | 5 | 288 | 3 | 295 | 1.19e-44 | 158 |
MS.gene25297.t1 | MTR_8g445780 | 37.912 | 364 | 192 | 15 | 13 | 358 | 2 | 349 | 2.56e-44 | 158 |
MS.gene25297.t1 | MTR_8g468760 | 36.490 | 359 | 161 | 12 | 15 | 350 | 2 | 316 | 7.16e-44 | 157 |
MS.gene25297.t1 | MTR_8g014260 | 35.733 | 389 | 204 | 16 | 1 | 365 | 1 | 367 | 2.17e-42 | 154 |
MS.gene25297.t1 | MTR_2g086020 | 59.589 | 146 | 54 | 4 | 52 | 196 | 1 | 142 | 3.63e-42 | 150 |
MS.gene25297.t1 | MTR_2g086020 | 71.186 | 59 | 13 | 2 | 311 | 367 | 178 | 234 | 8.65e-13 | 68.9 |
MS.gene25297.t1 | MTR_8g467800 | 37.003 | 327 | 173 | 11 | 1 | 310 | 1 | 311 | 4.18e-35 | 132 |
MS.gene25297.t1 | MTR_8g014160 | 31.884 | 276 | 158 | 9 | 26 | 280 | 41 | 307 | 2.03e-21 | 95.5 |
MS.gene25297.t1 | MTR_5g021550 | 42.308 | 156 | 75 | 8 | 20 | 166 | 13 | 162 | 1.26e-19 | 85.5 |
MS.gene25297.t1 | MTR_8g077460 | 35.484 | 217 | 117 | 10 | 19 | 221 | 3 | 210 | 2.28e-19 | 89.0 |
MS.gene25297.t1 | MTR_8g014290 | 38.217 | 157 | 76 | 8 | 26 | 167 | 10 | 160 | 2.33e-17 | 79.0 |
MS.gene25297.t1 | MTR_3g107160 | 27.820 | 266 | 167 | 9 | 21 | 268 | 5 | 263 | 1.45e-16 | 80.9 |
MS.gene25297.t1 | MTR_7g056447 | 31.707 | 205 | 121 | 8 | 26 | 224 | 9 | 200 | 1.58e-16 | 79.7 |
MS.gene25297.t1 | MTR_4g024720 | 40.141 | 142 | 65 | 8 | 1 | 136 | 1 | 128 | 5.25e-16 | 76.6 |
MS.gene25297.t1 | MTR_3g107100 | 28.409 | 352 | 192 | 15 | 20 | 364 | 5 | 303 | 6.84e-16 | 79.0 |
MS.gene25297.t1 | MTR_5g084070 | 27.616 | 344 | 214 | 15 | 25 | 354 | 12 | 334 | 1.41e-13 | 72.0 |
MS.gene25297.t1 | MTR_2g007450 | 30.667 | 225 | 123 | 11 | 21 | 221 | 11 | 226 | 2.53e-13 | 71.2 |
MS.gene25297.t1 | MTR_3g107120 | 26.909 | 275 | 161 | 11 | 26 | 270 | 9 | 273 | 2.80e-13 | 71.2 |
MS.gene25297.t1 | MTR_5g008950 | 28.767 | 219 | 128 | 9 | 28 | 241 | 1 | 196 | 1.48e-12 | 68.9 |
MS.gene25297.t1 | MTR_3g467400 | 29.808 | 208 | 121 | 9 | 26 | 217 | 3 | 201 | 1.93e-12 | 68.6 |
MS.gene25297.t1 | MTR_8g085430 | 30.049 | 203 | 119 | 7 | 25 | 216 | 10 | 200 | 2.01e-12 | 68.2 |
MS.gene25297.t1 | MTR_2g007400 | 28.019 | 207 | 134 | 7 | 25 | 220 | 11 | 213 | 3.33e-12 | 67.8 |
MS.gene25297.t1 | MTR_5g080710 | 27.246 | 345 | 220 | 13 | 25 | 354 | 32 | 360 | 8.49e-12 | 66.6 |
MS.gene25297.t1 | MTR_8g468910 | 39.252 | 107 | 57 | 4 | 7 | 110 | 29 | 130 | 9.21e-12 | 66.6 |
MS.gene25297.t1 | MTR_1g492880 | 38.889 | 90 | 53 | 2 | 22 | 110 | 2 | 90 | 2.33e-11 | 60.5 |
MS.gene25297.t1 | MTR_7g056433 | 34.171 | 199 | 109 | 10 | 26 | 216 | 12 | 196 | 2.64e-11 | 65.1 |
MS.gene25297.t1 | MTR_7g115270 | 29.500 | 200 | 127 | 7 | 26 | 218 | 12 | 204 | 2.88e-11 | 65.1 |
MS.gene25297.t1 | MTR_1089s0010 | 27.861 | 201 | 129 | 8 | 21 | 217 | 3 | 191 | 2.91e-11 | 64.7 |
MS.gene25297.t1 | MTR_2g007500 | 30.732 | 205 | 107 | 8 | 21 | 216 | 9 | 187 | 3.21e-11 | 64.3 |
MS.gene25297.t1 | MTR_1g492880 | 38.889 | 90 | 53 | 2 | 22 | 110 | 2 | 90 | 3.23e-11 | 60.1 |
MS.gene25297.t1 | MTR_4g113810 | 35.537 | 121 | 67 | 5 | 107 | 221 | 3 | 118 | 3.28e-11 | 62.0 |
MS.gene25297.t1 | MTR_3g036250 | 28.638 | 213 | 116 | 11 | 26 | 223 | 5 | 196 | 3.41e-11 | 64.7 |
MS.gene25297.t1 | MTR_1g107385 | 32.917 | 240 | 125 | 12 | 11 | 220 | 3 | 236 | 3.84e-11 | 64.7 |
MS.gene25297.t1 | MTR_5g073420 | 29.353 | 201 | 116 | 10 | 25 | 214 | 10 | 195 | 4.18e-11 | 64.3 |
MS.gene25297.t1 | MTR_1g041245 | 33.503 | 197 | 113 | 10 | 25 | 216 | 10 | 193 | 4.29e-11 | 64.3 |
MS.gene25297.t1 | MTR_4g024770 | 48.611 | 72 | 27 | 2 | 1 | 72 | 8 | 69 | 5.70e-11 | 58.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25297.t1 | AT4G10400 | 27.757 | 263 | 167 | 9 | 25 | 275 | 1 | 252 | 2.54e-16 | 80.5 |
MS.gene25297.t1 | AT4G10400 | 27.757 | 263 | 167 | 9 | 25 | 275 | 1 | 252 | 2.54e-16 | 80.5 |
MS.gene25297.t1 | AT4G10400 | 27.757 | 263 | 167 | 9 | 25 | 275 | 1 | 252 | 2.54e-16 | 80.5 |
MS.gene25297.t1 | AT1G69630 | 30.594 | 219 | 128 | 8 | 10 | 220 | 2 | 204 | 3.04e-16 | 80.5 |
MS.gene25297.t1 | AT1G78750 | 29.954 | 217 | 127 | 9 | 12 | 216 | 4 | 207 | 2.26e-15 | 77.8 |
MS.gene25297.t1 | AT1G78750 | 29.954 | 217 | 127 | 9 | 12 | 216 | 4 | 207 | 2.26e-15 | 77.8 |
MS.gene25297.t1 | AT3G59160 | 28.889 | 225 | 120 | 9 | 19 | 214 | 8 | 221 | 2.41e-14 | 74.7 |
MS.gene25297.t1 | AT3G42770 | 31.000 | 200 | 120 | 6 | 28 | 217 | 1 | 192 | 7.10e-14 | 73.6 |
MS.gene25297.t1 | AT1G66290 | 28.959 | 221 | 125 | 12 | 2 | 213 | 5 | 202 | 4.16e-13 | 70.9 |
MS.gene25297.t1 | AT1G16930 | 31.818 | 198 | 111 | 10 | 26 | 216 | 15 | 195 | 5.44e-13 | 70.5 |
MS.gene25297.t1 | AT1G16930 | 31.818 | 198 | 111 | 10 | 26 | 216 | 15 | 195 | 5.44e-13 | 70.5 |
MS.gene25297.t1 | AT1G16930 | 31.818 | 198 | 111 | 10 | 26 | 216 | 15 | 195 | 5.44e-13 | 70.5 |
MS.gene25297.t1 | AT4G26340 | 32.864 | 213 | 126 | 7 | 25 | 233 | 1 | 200 | 1.16e-12 | 69.3 |
MS.gene25297.t1 | AT3G59190 | 30.288 | 208 | 120 | 10 | 19 | 214 | 7 | 201 | 1.43e-12 | 68.9 |
MS.gene25297.t1 | AT3G59190 | 30.288 | 208 | 120 | 10 | 19 | 214 | 7 | 201 | 1.84e-12 | 68.9 |
MS.gene25297.t1 | AT4G14103 | 28.571 | 196 | 122 | 6 | 26 | 214 | 8 | 192 | 5.42e-12 | 67.4 |
MS.gene25297.t1 | AT3G59170 | 30.455 | 220 | 113 | 9 | 26 | 214 | 7 | 217 | 6.17e-12 | 67.4 |
MS.gene25297.t1 | AT2G42720 | 30.256 | 195 | 126 | 5 | 25 | 214 | 1 | 190 | 6.37e-12 | 67.0 |
MS.gene25297.t1 | AT4G14103 | 28.571 | 196 | 122 | 6 | 26 | 214 | 8 | 192 | 6.90e-12 | 66.6 |
MS.gene25297.t1 | AT4G14103 | 28.571 | 196 | 122 | 6 | 26 | 214 | 8 | 192 | 6.90e-12 | 66.6 |
MS.gene25297.t1 | AT3G59200 | 28.141 | 199 | 121 | 6 | 26 | 214 | 7 | 193 | 7.93e-12 | 66.6 |
MS.gene25297.t1 | AT5G56440 | 31.088 | 193 | 119 | 5 | 25 | 214 | 1 | 182 | 8.51e-12 | 66.6 |
MS.gene25297.t1 | AT5G56420 | 27.985 | 268 | 167 | 9 | 26 | 278 | 6 | 262 | 1.63e-11 | 65.9 |
MS.gene25297.t1 | AT5G56420 | 27.985 | 268 | 167 | 9 | 26 | 278 | 6 | 262 | 1.63e-11 | 65.9 |
MS.gene25297.t1 | AT5G56420 | 27.985 | 268 | 167 | 9 | 26 | 278 | 6 | 262 | 1.63e-11 | 65.9 |
MS.gene25297.t1 | AT3G59200 | 28.141 | 199 | 121 | 6 | 26 | 214 | 7 | 193 | 1.73e-11 | 65.9 |
MS.gene25297.t1 | AT5G22720 | 27.083 | 240 | 147 | 9 | 26 | 257 | 23 | 242 | 1.98e-11 | 65.9 |
MS.gene25297.t1 | AT3G26922 | 27.007 | 274 | 170 | 7 | 17 | 285 | 5 | 253 | 2.49e-11 | 64.7 |
MS.gene25297.t1 | AT3G26922 | 27.007 | 274 | 170 | 7 | 17 | 285 | 5 | 253 | 2.49e-11 | 64.7 |
Find 105 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGTAAACACTGCAGTCTTTC+TGG | 0.129894 | 8.2:-38299927 | MS.gene25297:intron |
AAACGAAGGATATATTAATT+TGG | 0.153932 | 8.2:-38299658 | MS.gene25297:CDS |
CCCCAAGCTGGAAACTTTGC+AGG | 0.229332 | 8.2:-38299790 | MS.gene25297:CDS |
GATTGGCCGGTTTCGAGCTC+TGG | 0.257085 | 8.2:+38299709 | None:intergenic |
CTTGTCTTGCACCTCCTACT+TGG | 0.287348 | 8.2:-38298368 | MS.gene25297:CDS |
GTCTCTCGGCACAGAAATTA+TGG | 0.288190 | 8.2:-38299847 | MS.gene25297:CDS |
ACCTGCAAAGTTTCCAGCTT+GGG | 0.309530 | 8.2:+38299789 | None:intergenic |
AACGAAGGATATATTAATTT+GGG | 0.327225 | 8.2:-38299657 | MS.gene25297:CDS |
CTCGCCGGTGGCGCCACCTC+TGG | 0.341008 | 8.2:-38300612 | MS.gene25297:CDS |
TATATTAATTTGGGCATTGT+AGG | 0.357147 | 8.2:-38299648 | MS.gene25297:CDS |
ATGTTTCAACTCAAATCTTC+TGG | 0.358687 | 8.2:-38299325 | MS.gene25297:CDS |
GAGATAGAGGTGTTGAAGTT+GGG | 0.360637 | 8.2:+38300375 | None:intergenic |
ACTAGGAGGTGGTCGAGAAC+AGG | 0.375934 | 8.2:+38299558 | None:intergenic |
AGAGATAGAGGTGTTGAAGT+TGG | 0.394213 | 8.2:+38300374 | None:intergenic |
GTAGACGGTAACAGTAGAAT+TGG | 0.397098 | 8.2:+38300572 | None:intergenic |
TTCCAACTAGAACCTCTGTT+TGG | 0.407347 | 8.2:-38300651 | MS.gene25297:CDS |
TTGGAAGGAAGGACATGATA+TGG | 0.420389 | 8.2:+38300668 | None:intergenic |
TGTAGGCAACTTTCACACTA+TGG | 0.425217 | 8.2:-38299631 | MS.gene25297:CDS |
AAATTACTTTCCTTCCTCTC+TGG | 0.429603 | 8.2:-38299816 | MS.gene25297:CDS |
CCTCTCTGGCTGCCCCAAGC+TGG | 0.444251 | 8.2:-38299802 | MS.gene25297:CDS |
TTGTCTTGCACCTCCTACTT+GGG | 0.447540 | 8.2:-38298367 | MS.gene25297:CDS |
GCTCCAACCTCCTTTCCCTT+AGG | 0.450370 | 8.2:-38300300 | MS.gene25297:intron |
TCTTTCTGGTAAGATCAGTA+TGG | 0.453817 | 8.2:-38299913 | MS.gene25297:CDS |
AATTCAGGATAATTTAGAAC+AGG | 0.454737 | 8.2:+38299381 | None:intergenic |
CCTTCCAGAGGTGGCGCCAC+CGG | 0.463852 | 8.2:+38300608 | None:intergenic |
CCGTAGATTTATAGCATCAT+GGG | 0.467450 | 8.2:+38299533 | None:intergenic |
TGCGGAAATTGCGGAGGTTG+AGG | 0.468343 | 8.2:+38300506 | None:intergenic |
CAATTGATGAAGAGGGAAGG+AGG | 0.470818 | 8.2:+38300322 | None:intergenic |
CGGCCAATCATAATTTCACT+TGG | 0.473090 | 8.2:-38299695 | MS.gene25297:CDS |
TTATAGCATCATGGGGAACT+AGG | 0.481247 | 8.2:+38299541 | None:intergenic |
AATTGATGAAGAGGGAAGGA+GGG | 0.486231 | 8.2:+38300323 | None:intergenic |
AACCTGCAAAGTTTCCAGCT+TGG | 0.491460 | 8.2:+38299788 | None:intergenic |
ATTGGCCGGTTTCGAGCTCT+GGG | 0.493701 | 8.2:+38299710 | None:intergenic |
ACCGTAGATTTATAGCATCA+TGG | 0.495398 | 8.2:+38299532 | None:intergenic |
CGTGTGAAGATCACATCTAA+TGG | 0.496529 | 8.2:-38298327 | MS.gene25297:CDS |
AACAGTAGAATTGGAAGACT+TGG | 0.497863 | 8.2:+38300581 | None:intergenic |
CAATGTGAACATAGAGATAG+AGG | 0.499821 | 8.2:+38300362 | None:intergenic |
GGTCCAAGTGAAATTATGAT+TGG | 0.503329 | 8.2:+38299692 | None:intergenic |
ATCACATCTAATGGTGCTAT+GGG | 0.509525 | 8.2:-38298318 | MS.gene25297:CDS |
TTCCTCCCAGAGCTCGAAAC+CGG | 0.515568 | 8.2:-38299715 | MS.gene25297:CDS |
AACTCTTCTGCTGATTTCTG+TGG | 0.519465 | 8.2:+38300754 | None:intergenic |
ATATGGCACAGGAGTGTGTT+CGG | 0.519601 | 8.2:+38300685 | None:intergenic |
GATCACATCTAATGGTGCTA+TGG | 0.523249 | 8.2:-38298319 | MS.gene25297:CDS |
GTCCAAACAGAGGTTCTAGT+TGG | 0.524498 | 8.2:+38300649 | None:intergenic |
TGAATGGAATTGAATGTAGA+CGG | 0.528341 | 8.2:+38300557 | None:intergenic |
CTTGGGGCAGCCAGAGAGGA+AGG | 0.529957 | 8.2:+38299806 | None:intergenic |
GGTTGGAGCAATTGATGAAG+AGG | 0.530052 | 8.2:+38300314 | None:intergenic |
TTCGAGCTCTGGGAGGAAGA+TGG | 0.530767 | 8.2:+38299720 | None:intergenic |
CGACAAATTCACTCTCAAAA+CGG | 0.535261 | 8.2:+38299583 | None:intergenic |
CAAGTGAAATTATGATTGGC+CGG | 0.539162 | 8.2:+38299696 | None:intergenic |
CCCATGATGCTATAAATCTA+CGG | 0.544523 | 8.2:-38299533 | MS.gene25297:CDS |
TGATGAAGAGGGAAGGAGGG+AGG | 0.545199 | 8.2:+38300326 | None:intergenic |
CTATGAGCCTCGTCTCTCGC+CGG | 0.546013 | 8.2:-38300627 | MS.gene25297:CDS |
CCGGTGGCGCCACCTCTGGA+AGG | 0.547084 | 8.2:-38300608 | MS.gene25297:CDS |
TCCTTCGTTTATATCGAAGT+AGG | 0.548690 | 8.2:+38299671 | None:intergenic |
TTACCTAAGGGAAAGGAGGT+TGG | 0.550204 | 8.2:+38300297 | None:intergenic |
GTGTTGAAGTTGGGGTCCAA+TGG | 0.551379 | 8.2:+38300384 | None:intergenic |
CCAGCTTGGGGCAGCCAGAG+AGG | 0.557168 | 8.2:+38299802 | None:intergenic |
GTTGGAGCAATTGATGAAGA+GGG | 0.561648 | 8.2:+38300315 | None:intergenic |
GCATTCGTCACAAAGACTGC+AGG | 0.566927 | 8.2:+38299750 | None:intergenic |
GTTGGGGTCCAATGGCATCA+AGG | 0.569817 | 8.2:+38300392 | None:intergenic |
TCGTGGATCCTTGATGCCAT+TGG | 0.570896 | 8.2:-38300400 | MS.gene25297:CDS |
TATGAATGTTGCGGAAATTG+CGG | 0.578436 | 8.2:+38300497 | None:intergenic |
AGATAGAGGTGTTGAAGTTG+GGG | 0.580903 | 8.2:+38300376 | None:intergenic |
AAACAGAGGTTCTAGTTGGA+AGG | 0.581002 | 8.2:+38300653 | None:intergenic |
TCAAGAAGTACGACCCAAGT+AGG | 0.584778 | 8.2:+38298354 | None:intergenic |
GAGCAATTGATGAAGAGGGA+AGG | 0.585056 | 8.2:+38300319 | None:intergenic |
AGAAGATTTGAGTTGAAACA+TGG | 0.586977 | 8.2:+38299327 | None:intergenic |
CCTGCAAAGTTTCCAGCTTG+GGG | 0.588595 | 8.2:+38299790 | None:intergenic |
AGAGACAACATCTTCAGTGA+TGG | 0.590452 | 8.2:+38299864 | None:intergenic |
GGAAGGACATGATATGGCAC+AGG | 0.590863 | 8.2:+38300674 | None:intergenic |
AGAGGTTCTAGTTGGAAGGA+AGG | 0.597523 | 8.2:+38300657 | None:intergenic |
CTAGGAGGTGGTCGAGAACA+GGG | 0.599798 | 8.2:+38299559 | None:intergenic |
TGAGAGGTTACCTAAGGGAA+AGG | 0.607320 | 8.2:+38300290 | None:intergenic |
CATCATGGGGAACTAGGAGG+TGG | 0.608053 | 8.2:+38299547 | None:intergenic |
TCACTGAAGATGTTGTCTCT+CGG | 0.611749 | 8.2:-38299861 | MS.gene25297:CDS |
GGCGCCACCGGCGAGAGACG+AGG | 0.612718 | 8.2:+38300620 | None:intergenic |
GATGGCAGAATCAAGAAGCA+TGG | 0.615963 | 8.2:-38300779 | MS.gene25297:CDS |
CATTAGATGTGATCTTCACA+CGG | 0.618872 | 8.2:+38298328 | None:intergenic |
CTTGGAGATCCTTCCAGAGG+TGG | 0.619949 | 8.2:+38300599 | None:intergenic |
TGAGCCTCGTCTCTCGCCGG+TGG | 0.621828 | 8.2:-38300624 | MS.gene25297:CDS |
TTGTCCACTGTGTTGAATCG+TGG | 0.624204 | 8.2:-38300417 | MS.gene25297:CDS |
TTCTGGTAAGATCAGTATGG+AGG | 0.627628 | 8.2:-38299910 | MS.gene25297:CDS |
GATGGAACTTATGAATGTTG+CGG | 0.629837 | 8.2:+38300488 | None:intergenic |
GTTGCGTCATTCGACATCAA+AGG | 0.630198 | 8.2:-38299511 | MS.gene25297:intron |
GAGTTAGTAAACGATGGCGG+AGG | 0.630834 | 8.2:-38300736 | MS.gene25297:CDS |
GATGAAAGGTGAGATCGAGA+TGG | 0.636927 | 8.2:+38300470 | None:intergenic |
AGAAGTACGACCCAAGTAGG+AGG | 0.642646 | 8.2:+38298357 | None:intergenic |
ATTAGATGTGATCTTCACAC+GGG | 0.650735 | 8.2:+38298329 | None:intergenic |
GGCCGGTTTCGAGCTCTGGG+AGG | 0.664051 | 8.2:+38299713 | None:intergenic |
TTATGAGAACTTGAAGCATG+CGG | 0.670506 | 8.2:+38299283 | None:intergenic |
AGGCAACTTTCACACTATGG+AGG | 0.670571 | 8.2:-38299628 | MS.gene25297:CDS |
GAGGTTACCTAAGGGAAAGG+AGG | 0.670966 | 8.2:+38300293 | None:intergenic |
TGCGGCATTTCTCAAGCACG+TGG | 0.671395 | 8.2:+38299301 | None:intergenic |
CGTAGATTTATAGCATCATG+GGG | 0.673823 | 8.2:+38299534 | None:intergenic |
GCAGAAGAGTTAGTAAACGA+TGG | 0.674951 | 8.2:-38300742 | MS.gene25297:CDS |
TCTCATAATTCAGAGCAACA+AGG | 0.677248 | 8.2:-38299268 | MS.gene25297:intron |
TAGCATCATGGGGAACTAGG+AGG | 0.681420 | 8.2:+38299544 | None:intergenic |
ACCTACTTCGATATAAACGA+AGG | 0.682972 | 8.2:-38299672 | MS.gene25297:CDS |
AGACTTGGAGATCCTTCCAG+AGG | 0.695151 | 8.2:+38300596 | None:intergenic |
GAAGAGTTAGTAAACGATGG+CGG | 0.698804 | 8.2:-38300739 | MS.gene25297:CDS |
GAATGTTGCGGAAATTGCGG+AGG | 0.710599 | 8.2:+38300500 | None:intergenic |
GAGGCTCATAGTCCAAACAG+AGG | 0.753115 | 8.2:+38300639 | None:intergenic |
TTAGATGTGATCTTCACACG+GGG | 0.760934 | 8.2:+38298330 | None:intergenic |
GGATCCACGATTCAACACAG+TGG | 0.768479 | 8.2:+38300413 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAATATTAGTAATTTGA+TGG | + | chr8.2:38299059-38299078 | None:intergenic | 10.0% |
!! | CATAATATATAGTAATAAGA+AGG | + | chr8.2:38298847-38298866 | None:intergenic | 15.0% |
!! | TTGAAAAAATTCTTAAATGT+TGG | - | chr8.2:38300440-38300459 | MS.gene25297:CDS | 15.0% |
!!! | AAAACAAATTTTTATGAAGT+GGG | + | chr8.2:38300569-38300588 | None:intergenic | 15.0% |
!! | AAACGAAGGATATATTAATT+TGG | - | chr8.2:38299431-38299450 | MS.gene25297:intron | 20.0% |
!! | AACGAAGGATATATTAATTT+GGG | - | chr8.2:38299432-38299451 | MS.gene25297:intron | 20.0% |
!! | AGTTTAATTCAAACAATCTT+TGG | - | chr8.2:38299859-38299878 | MS.gene25297:CDS | 20.0% |
!! | TGAGCATAAAAATAAATGAT+TGG | + | chr8.2:38298917-38298936 | None:intergenic | 20.0% |
!!! | AATAACAGAAACTTTTTGAA+TGG | + | chr8.2:38298551-38298570 | None:intergenic | 20.0% |
!!! | AGTAAAATCAGATTTTGTAA+AGG | + | chr8.2:38300420-38300439 | None:intergenic | 20.0% |
!!! | GAAAACAAATTTTTATGAAG+TGG | + | chr8.2:38300570-38300589 | None:intergenic | 20.0% |
!!! | TTTTATGCTCAAATTGAAAA+GGG | - | chr8.2:38298926-38298945 | MS.gene25297:intron | 20.0% |
!!! | TTTTTATGCTCAAATTGAAA+AGG | - | chr8.2:38298925-38298944 | MS.gene25297:intron | 20.0% |
! | AAATTCAATACTTGTCTGTA+TGG | + | chr8.2:38300247-38300266 | None:intergenic | 25.0% |
! | GAAATAAGAGTTGTCAAAAA+CGG | + | chr8.2:38298648-38298667 | None:intergenic | 25.0% |
! | TAACGATAATTTCAACAAGT+TGG | + | chr8.2:38300068-38300087 | None:intergenic | 25.0% |
!! | AATTCAGGATAATTTAGAAC+AGG | + | chr8.2:38299711-38299730 | None:intergenic | 25.0% |
!! | ATATAGCTTGTACTATTCTT+GGG | - | chr8.2:38300118-38300137 | MS.gene25297:intron | 25.0% |
!! | TATATAGCTTGTACTATTCT+TGG | - | chr8.2:38300117-38300136 | MS.gene25297:intron | 25.0% |
!! | TATATTAATTTGGGCATTGT+AGG | - | chr8.2:38299441-38299460 | MS.gene25297:intron | 25.0% |
!!! | TTGCCTTTTAAAAGAATTTC+AGG | - | chr8.2:38300464-38300483 | MS.gene25297:CDS | 25.0% |
AAAATTGATACTGCAATGAG+AGG | + | chr8.2:38298818-38298837 | None:intergenic | 30.0% | |
ACATGCATGTATATATTGAC+AGG | + | chr8.2:38299885-38299904 | None:intergenic | 30.0% | |
ATAACTATACTACTCCTTGT+AGG | + | chr8.2:38300165-38300184 | None:intergenic | 30.0% | |
ATAGCAATGTTGTGTCAATT+AGG | - | chr8.2:38298958-38298977 | MS.gene25297:intron | 30.0% | |
ATGTTTCAACTCAAATCTTC+TGG | - | chr8.2:38299764-38299783 | MS.gene25297:CDS | 30.0% | |
CTATATAGAAGCAAGTGTTT+GGG | + | chr8.2:38300104-38300123 | None:intergenic | 30.0% | |
GAAAAATGCATGTTGGAATT+CGG | - | chr8.2:38299964-38299983 | MS.gene25297:intron | 30.0% | |
GCTTCTACTCACAAATATAT+TGG | + | chr8.2:38299927-38299946 | None:intergenic | 30.0% | |
GTTTCATTTCTATGAGGAAA+AGG | - | chr8.2:38300275-38300294 | MS.gene25297:intron | 30.0% | |
TAACTATACTACTCCTTGTA+GGG | + | chr8.2:38300164-38300183 | None:intergenic | 30.0% | |
TACAGTGTTTCATTTCTATG+AGG | - | chr8.2:38300269-38300288 | MS.gene25297:intron | 30.0% | |
TAGAAACAAGCAACAAATGT+TGG | + | chr8.2:38300666-38300685 | None:intergenic | 30.0% | |
TATATAGAAGCAAGTGTTTG+GGG | + | chr8.2:38300103-38300122 | None:intergenic | 30.0% | |
TGAATGGAATTGAATGTAGA+CGG | + | chr8.2:38298535-38298554 | None:intergenic | 30.0% | |
TTGGAATTCGGTTAGAATTA+TGG | - | chr8.2:38299976-38299995 | MS.gene25297:intron | 30.0% | |
! | AAGATAGACCTTTGATGATA+TGG | + | chr8.2:38300346-38300365 | None:intergenic | 30.0% |
! | CCACCTGAAATTCTTTTAAA+AGG | + | chr8.2:38300470-38300489 | None:intergenic | 30.0% |
! | TATAGCTTGTACTATTCTTG+GGG | - | chr8.2:38300119-38300138 | MS.gene25297:intron | 30.0% |
! | TATATTGACCTGTCAGTTTT+TGG | - | chr8.2:38299141-38299160 | MS.gene25297:intron | 30.0% |
! | TTAGTAATTTGATGGCAAAC+AGG | + | chr8.2:38299051-38299070 | None:intergenic | 30.0% |
! | TTTTGTAAATCGCGAAATTC+AGG | + | chr8.2:38299726-38299745 | None:intergenic | 30.0% |
!! | AAGGTGAGGTTTTACTTTTA+TGG | - | chr8.2:38299597-38299616 | MS.gene25297:CDS | 30.0% |
!! | AGAAGATTTGAGTTGAAACA+TGG | + | chr8.2:38299765-38299784 | None:intergenic | 30.0% |
!! | CCTTTTAAAAGAATTTCAGG+TGG | - | chr8.2:38300467-38300486 | MS.gene25297:CDS | 30.0% |
!!! | ATTGGTTTTGTCATCCAAAA+AGG | - | chr8.2:38299005-38299024 | MS.gene25297:intron | 30.0% |
!!! | TAAACGTTTTAGCTAACTTG+AGG | - | chr8.2:38300695-38300714 | MS.gene25297:CDS | 30.0% |
AAATTACTTTCCTTCCTCTC+TGG | - | chr8.2:38299273-38299292 | MS.gene25297:CDS | 35.0% | |
AACAGTAGAATTGGAAGACT+TGG | + | chr8.2:38298511-38298530 | None:intergenic | 35.0% | |
AAGATTGCCAAGAAACTAGT+TGG | + | chr8.2:38300535-38300554 | None:intergenic | 35.0% | |
AATCCTTCAATACCAGTTTC+TGG | - | chr8.2:38300386-38300405 | MS.gene25297:CDS | 35.0% | |
ACCGTAGATTTATAGCATCA+TGG | + | chr8.2:38299560-38299579 | None:intergenic | 35.0% | |
ACCTACTTCGATATAAACGA+AGG | - | chr8.2:38299417-38299436 | MS.gene25297:intron | 35.0% | |
AGAGTGAGAAAAATGCATGT+TGG | - | chr8.2:38299957-38299976 | MS.gene25297:intron | 35.0% | |
AGTGTTTACCAAAAACTGAC+AGG | + | chr8.2:38299152-38299171 | None:intergenic | 35.0% | |
ATTAGATGTGATCTTCACAC+GGG | + | chr8.2:38300763-38300782 | None:intergenic | 35.0% | |
CAAGTGAAATTATGATTGGC+CGG | + | chr8.2:38299396-38299415 | None:intergenic | 35.0% | |
CAATGTGAACATAGAGATAG+AGG | + | chr8.2:38298730-38298749 | None:intergenic | 35.0% | |
CATTAGATGTGATCTTCACA+CGG | + | chr8.2:38300764-38300783 | None:intergenic | 35.0% | |
CCCATGATGCTATAAATCTA+CGG | - | chr8.2:38299556-38299575 | MS.gene25297:CDS | 35.0% | |
CCGTAGATTTATAGCATCAT+GGG | + | chr8.2:38299559-38299578 | None:intergenic | 35.0% | |
CGACAAATTCACTCTCAAAA+CGG | + | chr8.2:38299509-38299528 | None:intergenic | 35.0% | |
CGTAGATTTATAGCATCATG+GGG | + | chr8.2:38299558-38299577 | None:intergenic | 35.0% | |
CTTTCGATGGTCTATTTAAG+AGG | - | chr8.2:38298982-38299001 | MS.gene25297:intron | 35.0% | |
GATGGAACTTATGAATGTTG+CGG | + | chr8.2:38298604-38298623 | None:intergenic | 35.0% | |
GATGGTCTATTTAAGAGGAT+TGG | - | chr8.2:38298987-38299006 | MS.gene25297:intron | 35.0% | |
GCTATATAGAAGCAAGTGTT+TGG | + | chr8.2:38300105-38300124 | None:intergenic | 35.0% | |
GGTCCAAGTGAAATTATGAT+TGG | + | chr8.2:38299400-38299419 | None:intergenic | 35.0% | |
GGTTAAGATAAAGTCTAGAG+TGG | + | chr8.2:38300047-38300066 | None:intergenic | 35.0% | |
GTTAGAATTATGGTAAGTGG+TGG | - | chr8.2:38299986-38300005 | MS.gene25297:intron | 35.0% | |
TATGAATGTTGCGGAAATTG+CGG | + | chr8.2:38298595-38298614 | None:intergenic | 35.0% | |
TATGGGTTCCATATCATCAA+AGG | - | chr8.2:38300335-38300354 | MS.gene25297:CDS | 35.0% | |
TCCTTCGTTTATATCGAAGT+AGG | + | chr8.2:38299421-38299440 | None:intergenic | 35.0% | |
TCGGTTAGAATTATGGTAAG+TGG | - | chr8.2:38299983-38300002 | MS.gene25297:intron | 35.0% | |
TCTCATAATTCAGAGCAACA+AGG | - | chr8.2:38299821-38299840 | MS.gene25297:CDS | 35.0% | |
TGTCATCCAAAAAGGATTAG+CGG | - | chr8.2:38299013-38299032 | MS.gene25297:intron | 35.0% | |
TTATGAGAACTTGAAGCATG+CGG | + | chr8.2:38299809-38299828 | None:intergenic | 35.0% | |
! | AAACTGGTATTGAAGGATTG+GGG | + | chr8.2:38300385-38300404 | None:intergenic | 35.0% |
! | AGAAACTGGTATTGAAGGAT+TGG | + | chr8.2:38300387-38300406 | None:intergenic | 35.0% |
! | ATACCAGAAACTGGTATTGA+AGG | + | chr8.2:38300392-38300411 | None:intergenic | 35.0% |
! | GAAACTGGTATTGAAGGATT+GGG | + | chr8.2:38300386-38300405 | None:intergenic | 35.0% |
! | TCTTTCTGGTAAGATCAGTA+TGG | - | chr8.2:38299176-38299195 | MS.gene25297:intron | 35.0% |
! | TTGATGATATGGAACCCATA+TGG | + | chr8.2:38300335-38300354 | None:intergenic | 35.0% |
!! | ATCACATCTAATGGTGCTAT+GGG | - | chr8.2:38300771-38300790 | MS.gene25297:CDS | 35.0% |
!! | TCAATACCAGTTTCTGGTAT+TGG | - | chr8.2:38300392-38300411 | MS.gene25297:CDS | 35.0% |
AAGCAAGTGTTTGGGGATAT+AGG | + | chr8.2:38300096-38300115 | None:intergenic | 40.0% | |
AAGGAACCAATACCAGAAAC+TGG | + | chr8.2:38300401-38300420 | None:intergenic | 40.0% | |
AATTGATGAAGAGGGAAGGA+GGG | + | chr8.2:38298769-38298788 | None:intergenic | 40.0% | |
AGAGACAACATCTTCAGTGA+TGG | + | chr8.2:38299228-38299247 | None:intergenic | 40.0% | |
ATGATATGGAACCCATATGG+TGG | + | chr8.2:38300332-38300351 | None:intergenic | 40.0% | |
ATGCTGCAAGGCATATAGAT+TGG | + | chr8.2:38300208-38300227 | None:intergenic | 40.0% | |
CAAGGCATATAGATTGGATC+AGG | + | chr8.2:38300202-38300221 | None:intergenic | 40.0% | |
CCTTGTAGGGATCTTGATTT+GGG | + | chr8.2:38300151-38300170 | None:intergenic | 40.0% | |
CGATAACAACAAGTGATTGC+AGG | + | chr8.2:38299660-38299679 | None:intergenic | 40.0% | |
CGGCCAATCATAATTTCACT+TGG | - | chr8.2:38299394-38299413 | MS.gene25297:CDS | 40.0% | |
CGTGTGAAGATCACATCTAA+TGG | - | chr8.2:38300762-38300781 | MS.gene25297:CDS | 40.0% | |
GAAGAGTTAGTAAACGATGG+CGG | - | chr8.2:38298350-38298369 | MS.gene25297:CDS | 40.0% | |
GACTCATCTTTCCACCATAT+GGG | - | chr8.2:38300318-38300337 | MS.gene25297:CDS | 40.0% | |
GCAGAAGAGTTAGTAAACGA+TGG | - | chr8.2:38298347-38298366 | MS.gene25297:CDS | 40.0% | |
GTAGACGGTAACAGTAGAAT+TGG | + | chr8.2:38298520-38298539 | None:intergenic | 40.0% | |
GTCAAAAACGGAACGATGAA+AGG | + | chr8.2:38298636-38298655 | None:intergenic | 40.0% | |
GTGTCAATTAGGTCTTTCGA+TGG | - | chr8.2:38298969-38298988 | MS.gene25297:intron | 40.0% | |
GTTGGAGCAATTGATGAAGA+GGG | + | chr8.2:38298777-38298796 | None:intergenic | 40.0% | |
TACTTGTCTGTATGGCATGA+TGG | + | chr8.2:38300239-38300258 | None:intergenic | 40.0% | |
TCACTGAAGATGTTGTCTCT+CGG | - | chr8.2:38299228-38299247 | MS.gene25297:intron | 40.0% | |
TCCTTGTAGGGATCTTGATT+TGG | + | chr8.2:38300152-38300171 | None:intergenic | 40.0% | |
TGACTCATCTTTCCACCATA+TGG | - | chr8.2:38300317-38300336 | MS.gene25297:CDS | 40.0% | |
TGCAATGAGAGGTTACCTAA+GGG | + | chr8.2:38298807-38298826 | None:intergenic | 40.0% | |
TGGATCCTGAAAATGTGTTC+AGG | + | chr8.2:38300027-38300046 | None:intergenic | 40.0% | |
TGTAGGCAACTTTCACACTA+TGG | - | chr8.2:38299458-38299477 | MS.gene25297:intron | 40.0% | |
TTAGATGTGATCTTCACACG+GGG | + | chr8.2:38300762-38300781 | None:intergenic | 40.0% | |
TTATAGCATCATGGGGAACT+AGG | + | chr8.2:38299551-38299570 | None:intergenic | 40.0% | |
TTCCAACTAGAACCTCTGTT+TGG | - | chr8.2:38298438-38298457 | MS.gene25297:intron | 40.0% | |
TTCTGGTAAGATCAGTATGG+AGG | - | chr8.2:38299179-38299198 | MS.gene25297:intron | 40.0% | |
TTGGAAGGAAGGACATGATA+TGG | + | chr8.2:38298424-38298443 | None:intergenic | 40.0% | |
! | AAACAGAGGTTCTAGTTGGA+AGG | + | chr8.2:38298439-38298458 | None:intergenic | 40.0% |
! | ACCTGATCCAACTAGTTTCT+TGG | - | chr8.2:38300525-38300544 | MS.gene25297:CDS | 40.0% |
! | ATTTCAGGTGGTCTATCACT+TGG | - | chr8.2:38300479-38300498 | MS.gene25297:CDS | 40.0% |
! | CTTGTAGGGATCTTGATTTG+GGG | + | chr8.2:38300150-38300169 | None:intergenic | 40.0% |
! | GATCACATCTAATGGTGCTA+TGG | - | chr8.2:38300770-38300789 | MS.gene25297:CDS | 40.0% |
! | TCATGCCTGAACACATTTTC+AGG | - | chr8.2:38300019-38300038 | MS.gene25297:intron | 40.0% |
!! | AACTCTTCTGCTGATTTCTG+TGG | + | chr8.2:38298338-38298357 | None:intergenic | 40.0% |
!! | AGAGATAGAGGTGTTGAAGT+TGG | + | chr8.2:38298718-38298737 | None:intergenic | 40.0% |
!! | AGATAGAGGTGTTGAAGTTG+GGG | + | chr8.2:38298716-38298735 | None:intergenic | 40.0% |
!! | GAGATAGAGGTGTTGAAGTT+GGG | + | chr8.2:38298717-38298736 | None:intergenic | 40.0% |
AACCTGCAAAGTTTCCAGCT+TGG | + | chr8.2:38299304-38299323 | None:intergenic | 45.0% | |
ACCTGCAAAGTTTCCAGCTT+GGG | + | chr8.2:38299303-38299322 | None:intergenic | 45.0% | |
AGGCAACTTTCACACTATGG+AGG | - | chr8.2:38299461-38299480 | MS.gene25297:intron | 45.0% | |
ATGGTGACAAGAATGCTGCA+AGG | + | chr8.2:38300220-38300239 | None:intergenic | 45.0% | |
CAATTGATGAAGAGGGAAGG+AGG | + | chr8.2:38298770-38298789 | None:intergenic | 45.0% | |
CCCAAATCAAGATCCCTACA+AGG | - | chr8.2:38300148-38300167 | MS.gene25297:intron | 45.0% | |
CTGCAATGAGAGGTTACCTA+AGG | + | chr8.2:38298808-38298827 | None:intergenic | 45.0% | |
GAGCAATTGATGAAGAGGGA+AGG | + | chr8.2:38298773-38298792 | None:intergenic | 45.0% | |
GATGAAAGGTGAGATCGAGA+TGG | + | chr8.2:38298622-38298641 | None:intergenic | 45.0% | |
GCCAAGAAACTAGTTGGATC+AGG | + | chr8.2:38300529-38300548 | None:intergenic | 45.0% | |
GGTAAACACTGCAGTCTTTC+TGG | - | chr8.2:38299162-38299181 | MS.gene25297:intron | 45.0% | |
GGTTGGAGCAATTGATGAAG+AGG | + | chr8.2:38298778-38298797 | None:intergenic | 45.0% | |
GTATTGAAGGATTGGGGCAA+AGG | + | chr8.2:38300379-38300398 | None:intergenic | 45.0% | |
GTCATTCGACATCAAAGGTG+AGG | - | chr8.2:38299583-38299602 | MS.gene25297:CDS | 45.0% | |
GTCTCTCGGCACAGAAATTA+TGG | - | chr8.2:38299242-38299261 | MS.gene25297:intron | 45.0% | |
GTTGCGTCATTCGACATCAA+AGG | - | chr8.2:38299578-38299597 | MS.gene25297:CDS | 45.0% | |
TGAGAGGTTACCTAAGGGAA+AGG | + | chr8.2:38298802-38298821 | None:intergenic | 45.0% | |
TTACCTAAGGGAAAGGAGGT+TGG | + | chr8.2:38298795-38298814 | None:intergenic | 45.0% | |
TTGTCCACTGTGTTGAATCG+TGG | - | chr8.2:38298672-38298691 | MS.gene25297:intron | 45.0% | |
TTGTCTTGCACCTCCTACTT+GGG | - | chr8.2:38300722-38300741 | MS.gene25297:CDS | 45.0% | |
! | AGAGGTTCTAGTTGGAAGGA+AGG | + | chr8.2:38298435-38298454 | None:intergenic | 45.0% |
! | ATATGGCACAGGAGTGTGTT+CGG | + | chr8.2:38298407-38298426 | None:intergenic | 45.0% |
! | GTCCAAACAGAGGTTCTAGT+TGG | + | chr8.2:38298443-38298462 | None:intergenic | 45.0% |
! | TCAAGAAGTACGACCCAAGT+AGG | + | chr8.2:38300738-38300757 | None:intergenic | 45.0% |
AGACTTGGAGATCCTTCCAG+AGG | + | chr8.2:38298496-38298515 | None:intergenic | 50.0% | |
CCTGCAAAGTTTCCAGCTTG+GGG | + | chr8.2:38299302-38299321 | None:intergenic | 50.0% | |
CTTGTCTTGCACCTCCTACT+TGG | - | chr8.2:38300721-38300740 | MS.gene25297:CDS | 50.0% | |
GAATGTTGCGGAAATTGCGG+AGG | + | chr8.2:38298592-38298611 | None:intergenic | 50.0% | |
GAGGCTCATAGTCCAAACAG+AGG | + | chr8.2:38298453-38298472 | None:intergenic | 50.0% | |
GAGGTTACCTAAGGGAAAGG+AGG | + | chr8.2:38298799-38298818 | None:intergenic | 50.0% | |
GCATTCGTCACAAAGACTGC+AGG | + | chr8.2:38299342-38299361 | None:intergenic | 50.0% | |
GGAAGGACATGATATGGCAC+AGG | + | chr8.2:38298418-38298437 | None:intergenic | 50.0% | |
GGATCCACGATTCAACACAG+TGG | + | chr8.2:38298679-38298698 | None:intergenic | 50.0% | |
GTGTTGAAGTTGGGGTCCAA+TGG | + | chr8.2:38298708-38298727 | None:intergenic | 50.0% | |
TAGCATCATGGGGAACTAGG+AGG | + | chr8.2:38299548-38299567 | None:intergenic | 50.0% | |
TCGTGGATCCTTGATGCCAT+TGG | - | chr8.2:38298689-38298708 | MS.gene25297:intron | 50.0% | |
! | AGAAGTACGACCCAAGTAGG+AGG | + | chr8.2:38300735-38300754 | None:intergenic | 50.0% |
! | GAGTTAGTAAACGATGGCGG+AGG | - | chr8.2:38298353-38298372 | MS.gene25297:CDS | 50.0% |
ACTAGGAGGTGGTCGAGAAC+AGG | + | chr8.2:38299534-38299553 | None:intergenic | 55.0% | |
CATCATGGGGAACTAGGAGG+TGG | + | chr8.2:38299545-38299564 | None:intergenic | 55.0% | |
CCCCAAGCTGGAAACTTTGC+AGG | - | chr8.2:38299299-38299318 | MS.gene25297:CDS | 55.0% | |
CTAGGAGGTGGTCGAGAACA+GGG | + | chr8.2:38299533-38299552 | None:intergenic | 55.0% | |
CTTGGAGATCCTTCCAGAGG+TGG | + | chr8.2:38298493-38298512 | None:intergenic | 55.0% | |
GCTCCAACCTCCTTTCCCTT+AGG | - | chr8.2:38298789-38298808 | MS.gene25297:intron | 55.0% | |
GTTGGGGTCCAATGGCATCA+AGG | + | chr8.2:38298700-38298719 | None:intergenic | 55.0% | |
TGATGAAGAGGGAAGGAGGG+AGG | + | chr8.2:38298766-38298785 | None:intergenic | 55.0% | |
TGCGGAAATTGCGGAGGTTG+AGG | + | chr8.2:38298586-38298605 | None:intergenic | 55.0% | |
TGCGGCATTTCTCAAGCACG+TGG | + | chr8.2:38299791-38299810 | None:intergenic | 55.0% | |
TTCCTCCCAGAGCTCGAAAC+CGG | - | chr8.2:38299374-38299393 | MS.gene25297:CDS | 55.0% | |
! | ATTGGCCGGTTTCGAGCTCT+GGG | + | chr8.2:38299382-38299401 | None:intergenic | 55.0% |
! | GCTGCGCCGCTAATCCTTTT+TGG | + | chr8.2:38299022-38299041 | None:intergenic | 55.0% |
!! | TTCGAGCTCTGGGAGGAAGA+TGG | + | chr8.2:38299372-38299391 | None:intergenic | 55.0% |
CTATGAGCCTCGTCTCTCGC+CGG | - | chr8.2:38298462-38298481 | MS.gene25297:intron | 60.0% | |
! | GATTGGCCGGTTTCGAGCTC+TGG | + | chr8.2:38299383-38299402 | None:intergenic | 60.0% |
CTTGGGGCAGCCAGAGAGGA+AGG | + | chr8.2:38299286-38299305 | None:intergenic | 65.0% | |
CCAGCTTGGGGCAGCCAGAG+AGG | + | chr8.2:38299290-38299309 | None:intergenic | 70.0% | |
CCTCTCTGGCTGCCCCAAGC+TGG | - | chr8.2:38299287-38299306 | MS.gene25297:CDS | 70.0% | |
CCTTCCAGAGGTGGCGCCAC+CGG | + | chr8.2:38298484-38298503 | None:intergenic | 70.0% | |
TGAGCCTCGTCTCTCGCCGG+TGG | - | chr8.2:38298465-38298484 | MS.gene25297:intron | 70.0% | |
!! | GGCCGGTTTCGAGCTCTGGG+AGG | + | chr8.2:38299379-38299398 | None:intergenic | 70.0% |
CCGGTGGCGCCACCTCTGGA+AGG | - | chr8.2:38298481-38298500 | MS.gene25297:intron | 75.0% | |
! | CTCGCCGGTGGCGCCACCTC+TGG | - | chr8.2:38298477-38298496 | MS.gene25297:intron | 80.0% |
! | GGCGCCACCGGCGAGAGACG+AGG | + | chr8.2:38298472-38298491 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 38298311 | 38300800 | 38298311 | ID=MS.gene25297 |
chr8.2 | mRNA | 38298311 | 38300800 | 38298311 | ID=MS.gene25297.t1;Parent=MS.gene25297 |
chr8.2 | exon | 38300301 | 38300800 | 38300301 | ID=MS.gene25297.t1.exon1;Parent=MS.gene25297.t1 |
chr8.2 | CDS | 38300301 | 38300800 | 38300301 | ID=cds.MS.gene25297.t1;Parent=MS.gene25297.t1 |
chr8.2 | exon | 38299512 | 38299935 | 38299512 | ID=MS.gene25297.t1.exon2;Parent=MS.gene25297.t1 |
chr8.2 | CDS | 38299512 | 38299935 | 38299512 | ID=cds.MS.gene25297.t1;Parent=MS.gene25297.t1 |
chr8.2 | exon | 38299269 | 38299418 | 38299269 | ID=MS.gene25297.t1.exon3;Parent=MS.gene25297.t1 |
chr8.2 | CDS | 38299269 | 38299418 | 38299269 | ID=cds.MS.gene25297.t1;Parent=MS.gene25297.t1 |
chr8.2 | exon | 38298311 | 38298394 | 38298311 | ID=MS.gene25297.t1.exon4;Parent=MS.gene25297.t1 |
chr8.2 | CDS | 38298311 | 38298394 | 38298311 | ID=cds.MS.gene25297.t1;Parent=MS.gene25297.t1 |
Gene Sequence |
Protein sequence |