Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64993.t1 | XP_003628566.2 | 91.9 | 434 | 33 | 1 | 1 | 432 | 1 | 434 | 2.40E-228 | 801.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64993.t1 | Q9FM89 | 26.8 | 441 | 284 | 16 | 6 | 428 | 3 | 422 | 3.5e-23 | 110.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64993.t1 | G7LDT4 | 91.9 | 434 | 33 | 1 | 1 | 432 | 1 | 434 | 1.7e-228 | 801.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64993.t1 | MTR_8g062010 | 91.935 | 434 | 33 | 1 | 1 | 432 | 1 | 434 | 0.0 | 786 |
MS.gene64993.t1 | MTR_8g070950 | 63.242 | 438 | 145 | 8 | 3 | 432 | 9 | 438 | 5.14e-175 | 497 |
MS.gene64993.t1 | MTR_8g062080 | 57.589 | 448 | 161 | 10 | 1 | 432 | 15 | 449 | 1.59e-159 | 458 |
MS.gene64993.t1 | MTR_8g062310 | 58.491 | 424 | 152 | 7 | 9 | 428 | 25 | 428 | 5.72e-158 | 453 |
MS.gene64993.t1 | MTR_8g058965 | 56.209 | 459 | 155 | 11 | 9 | 432 | 13 | 460 | 7.31e-158 | 454 |
MS.gene64993.t1 | MTR_8g469020 | 54.923 | 457 | 165 | 10 | 9 | 432 | 7 | 455 | 6.58e-154 | 444 |
MS.gene64993.t1 | MTR_8g062300 | 55.388 | 464 | 159 | 10 | 9 | 432 | 26 | 481 | 2.54e-153 | 443 |
MS.gene64993.t1 | MTR_4g050250 | 51.942 | 412 | 154 | 10 | 2 | 374 | 14 | 420 | 2.53e-122 | 362 |
MS.gene64993.t1 | MTR_8g467790 | 50.396 | 379 | 140 | 9 | 9 | 372 | 148 | 493 | 2.39e-108 | 329 |
MS.gene64993.t1 | MTR_2g083840 | 43.612 | 454 | 220 | 12 | 3 | 428 | 12 | 457 | 1.29e-96 | 297 |
MS.gene64993.t1 | MTR_8g468810 | 42.257 | 452 | 218 | 18 | 8 | 428 | 24 | 463 | 1.44e-85 | 269 |
MS.gene64993.t1 | MTR_8g062270 | 39.868 | 454 | 222 | 16 | 9 | 427 | 16 | 453 | 2.13e-80 | 255 |
MS.gene64993.t1 | MTR_8g058970 | 38.622 | 479 | 233 | 16 | 3 | 428 | 7 | 477 | 7.82e-77 | 247 |
MS.gene64993.t1 | MTR_8g014260 | 40.220 | 455 | 232 | 17 | 3 | 428 | 8 | 451 | 9.05e-77 | 246 |
MS.gene64993.t1 | MTR_8g467800 | 40.090 | 444 | 232 | 9 | 9 | 428 | 20 | 453 | 4.66e-76 | 244 |
MS.gene64993.t1 | MTR_4g032730 | 39.262 | 461 | 229 | 14 | 9 | 427 | 15 | 466 | 3.01e-74 | 240 |
MS.gene64993.t1 | MTR_5g092960 | 38.411 | 453 | 235 | 13 | 9 | 427 | 19 | 461 | 3.99e-69 | 226 |
MS.gene64993.t1 | MTR_2g086020 | 77.622 | 143 | 32 | 0 | 290 | 432 | 177 | 319 | 1.10e-67 | 218 |
MS.gene64993.t1 | MTR_2g086020 | 48.684 | 152 | 61 | 4 | 35 | 177 | 1 | 144 | 1.25e-32 | 126 |
MS.gene64993.t1 | MTR_8g468840 | 37.194 | 449 | 247 | 12 | 4 | 426 | 9 | 448 | 3.66e-63 | 211 |
MS.gene64993.t1 | MTR_8g468760 | 36.026 | 458 | 222 | 15 | 1 | 427 | 1 | 418 | 2.09e-62 | 207 |
MS.gene64993.t1 | MTR_8g445780 | 38.366 | 404 | 204 | 16 | 3 | 381 | 7 | 390 | 3.62e-60 | 201 |
MS.gene64993.t1 | MTR_8g468810 | 41.389 | 360 | 170 | 16 | 8 | 338 | 24 | 371 | 3.29e-57 | 192 |
MS.gene64993.t1 | MTR_8g014160 | 35.874 | 446 | 207 | 18 | 5 | 428 | 37 | 425 | 1.13e-56 | 192 |
MS.gene64993.t1 | MTR_8g468810 | 42.857 | 287 | 131 | 12 | 8 | 272 | 24 | 299 | 3.01e-46 | 162 |
MS.gene64993.t1 | MTR_8g468810 | 43.206 | 287 | 130 | 13 | 8 | 272 | 24 | 299 | 3.31e-46 | 162 |
MS.gene64993.t1 | MTR_8g468810 | 42.857 | 287 | 131 | 12 | 8 | 272 | 24 | 299 | 4.78e-46 | 162 |
MS.gene64993.t1 | MTR_5g092960 | 38.611 | 360 | 184 | 11 | 9 | 338 | 19 | 371 | 8.11e-46 | 163 |
MS.gene64993.t1 | MTR_4g024710 | 37.829 | 304 | 157 | 12 | 145 | 428 | 56 | 347 | 2.73e-42 | 152 |
MS.gene64993.t1 | MTR_8g467800 | 41.637 | 281 | 140 | 7 | 9 | 272 | 20 | 293 | 1.06e-40 | 148 |
MS.gene64993.t1 | MTR_8g077460 | 50.376 | 133 | 63 | 3 | 296 | 428 | 246 | 375 | 4.37e-34 | 131 |
MS.gene64993.t1 | MTR_8g077460 | 40.088 | 227 | 113 | 11 | 1 | 211 | 1 | 220 | 6.07e-26 | 108 |
MS.gene64993.t1 | MTR_8g014210 | 38.723 | 235 | 127 | 7 | 205 | 428 | 3 | 231 | 5.37e-34 | 127 |
MS.gene64993.t1 | MTR_5g021550 | 47.945 | 146 | 70 | 4 | 8 | 148 | 18 | 162 | 1.92e-30 | 115 |
MS.gene64993.t1 | MTR_3g099800 | 65.517 | 87 | 29 | 1 | 340 | 425 | 19 | 105 | 6.12e-30 | 112 |
MS.gene64993.t1 | MTR_1g041245 | 28.764 | 445 | 223 | 19 | 9 | 428 | 11 | 386 | 2.71e-29 | 118 |
MS.gene64993.t1 | MTR_4g024745 | 35.231 | 281 | 146 | 12 | 154 | 411 | 17 | 284 | 9.09e-29 | 114 |
MS.gene64993.t1 | MTR_5g008950 | 28.276 | 435 | 219 | 18 | 14 | 428 | 4 | 365 | 1.10e-27 | 113 |
MS.gene64993.t1 | MTR_3g108150 | 29.195 | 435 | 233 | 19 | 8 | 427 | 12 | 386 | 1.60e-26 | 110 |
MS.gene64993.t1 | MTR_5g084070 | 27.650 | 434 | 285 | 12 | 1 | 420 | 1 | 419 | 6.92e-26 | 109 |
MS.gene64993.t1 | MTR_7g056433 | 26.424 | 439 | 251 | 17 | 5 | 428 | 8 | 389 | 1.65e-25 | 107 |
MS.gene64993.t1 | MTR_7g056287 | 26.790 | 433 | 239 | 16 | 9 | 427 | 3 | 371 | 2.01e-25 | 107 |
MS.gene64993.t1 | MTR_7g056277 | 26.712 | 438 | 243 | 16 | 4 | 427 | 254 | 627 | 4.15e-25 | 108 |
MS.gene64993.t1 | MTR_2g036470 | 26.932 | 453 | 240 | 21 | 2 | 427 | 7 | 395 | 6.51e-25 | 105 |
MS.gene64993.t1 | MTR_2g007450 | 28.602 | 472 | 235 | 22 | 1 | 425 | 1 | 417 | 1.52e-24 | 105 |
MS.gene64993.t1 | MTR_7g026500 | 26.757 | 441 | 245 | 15 | 7 | 427 | 12 | 394 | 5.41e-23 | 100 |
MS.gene64993.t1 | MTR_5g080710 | 25.522 | 431 | 285 | 13 | 9 | 420 | 33 | 446 | 1.15e-22 | 100 |
MS.gene64993.t1 | MTR_8g014290 | 42.308 | 156 | 76 | 6 | 5 | 148 | 6 | 159 | 3.38e-22 | 93.2 |
MS.gene64993.t1 | MTR_7g115270 | 25.455 | 440 | 265 | 16 | 3 | 425 | 6 | 399 | 9.80e-22 | 97.1 |
MS.gene64993.t1 | MTR_6g040270 | 26.852 | 432 | 236 | 18 | 11 | 425 | 10 | 378 | 1.12e-20 | 93.6 |
MS.gene64993.t1 | MTR_7g075820 | 26.058 | 449 | 241 | 19 | 7 | 425 | 4 | 391 | 1.35e-20 | 93.6 |
MS.gene64993.t1 | MTR_2g008310 | 27.626 | 438 | 231 | 20 | 9 | 428 | 2 | 371 | 1.63e-20 | 93.2 |
MS.gene64993.t1 | MTR_0543s0010 | 25.858 | 437 | 237 | 14 | 7 | 427 | 84 | 449 | 2.87e-20 | 93.2 |
MS.gene64993.t1 | MTR_1g108820 | 29.108 | 426 | 243 | 18 | 9 | 425 | 8 | 383 | 5.30e-20 | 91.7 |
MS.gene64993.t1 | MTR_7g056430 | 26.218 | 431 | 237 | 15 | 1 | 422 | 1 | 359 | 8.99e-20 | 92.8 |
MS.gene64993.t1 | MTR_7g033915 | 27.400 | 427 | 229 | 18 | 9 | 427 | 11 | 364 | 1.38e-19 | 90.1 |
MS.gene64993.t1 | MTR_7g098480 | 25.566 | 442 | 246 | 14 | 4 | 427 | 12 | 388 | 5.22e-19 | 89.4 |
MS.gene64993.t1 | MTR_7g007080 | 28.289 | 456 | 225 | 23 | 8 | 433 | 3 | 386 | 5.54e-19 | 88.6 |
MS.gene64993.t1 | MTR_7g098570 | 25.785 | 446 | 241 | 16 | 1 | 424 | 12 | 389 | 2.01e-18 | 87.8 |
MS.gene64993.t1 | MTR_8g085430 | 32.663 | 199 | 111 | 8 | 9 | 193 | 11 | 200 | 2.99e-18 | 85.9 |
MS.gene64993.t1 | MTR_3g087260 | 27.615 | 478 | 256 | 18 | 8 | 427 | 11 | 456 | 2.16e-17 | 84.3 |
MS.gene64993.t1 | MTR_5g007410 | 26.651 | 424 | 250 | 16 | 14 | 425 | 31 | 405 | 3.48e-17 | 83.6 |
MS.gene64993.t1 | MTR_1g085120 | 25.581 | 430 | 260 | 16 | 9 | 428 | 92 | 471 | 3.56e-17 | 84.0 |
MS.gene64993.t1 | MTR_4g080787 | 24.598 | 435 | 270 | 13 | 3 | 395 | 13 | 431 | 3.65e-17 | 84.0 |
MS.gene64993.t1 | MTR_3g107120 | 26.906 | 446 | 247 | 19 | 1 | 425 | 1 | 388 | 3.94e-17 | 83.2 |
MS.gene64993.t1 | MTR_3g107160 | 27.252 | 433 | 245 | 15 | 8 | 428 | 9 | 383 | 6.15e-17 | 82.4 |
MS.gene64993.t1 | MTR_1g085120 | 26.047 | 430 | 258 | 16 | 9 | 428 | 167 | 546 | 7.06e-17 | 83.2 |
MS.gene64993.t1 | MTR_2g007400 | 25.862 | 464 | 247 | 23 | 1 | 428 | 1 | 403 | 1.81e-16 | 81.3 |
MS.gene64993.t1 | MTR_3g108560 | 26.196 | 439 | 236 | 20 | 8 | 427 | 19 | 388 | 1.94e-16 | 80.9 |
MS.gene64993.t1 | MTR_7g032380 | 33.333 | 192 | 110 | 7 | 9 | 192 | 11 | 192 | 1.96e-16 | 80.9 |
MS.gene64993.t1 | MTR_7g032380 | 30.387 | 181 | 98 | 7 | 266 | 428 | 186 | 356 | 4.22e-13 | 70.5 |
MS.gene64993.t1 | MTR_0492s0020 | 25.362 | 414 | 218 | 15 | 7 | 400 | 84 | 426 | 3.23e-16 | 80.9 |
MS.gene64993.t1 | MTR_7g056447 | 33.166 | 199 | 111 | 9 | 1 | 190 | 1 | 186 | 9.09e-16 | 77.8 |
MS.gene64993.t1 | MTR_4g024720 | 34.302 | 172 | 86 | 6 | 3 | 149 | 8 | 177 | 1.02e-15 | 76.3 |
MS.gene64993.t1 | MTR_3g023630 | 33.679 | 193 | 108 | 8 | 6 | 189 | 5 | 186 | 2.28e-15 | 77.8 |
MS.gene64993.t1 | MTR_8g014230 | 42.857 | 84 | 46 | 2 | 338 | 421 | 17 | 98 | 2.31e-15 | 72.0 |
MS.gene64993.t1 | MTR_3g107100 | 31.250 | 192 | 119 | 6 | 9 | 194 | 11 | 195 | 4.11e-15 | 77.0 |
MS.gene64993.t1 | MTR_2g007500 | 33.659 | 205 | 101 | 8 | 1 | 193 | 6 | 187 | 1.02e-14 | 75.5 |
MS.gene64993.t1 | MTR_1g053025 | 24.771 | 436 | 258 | 14 | 9 | 425 | 2 | 386 | 4.16e-14 | 73.9 |
MS.gene64993.t1 | MTR_5g083890 | 29.469 | 207 | 118 | 8 | 8 | 191 | 5 | 206 | 4.98e-14 | 74.3 |
MS.gene64993.t1 | MTR_1g066830 | 24.476 | 429 | 264 | 18 | 9 | 427 | 8 | 386 | 6.39e-14 | 73.6 |
MS.gene64993.t1 | MTR_4g080773 | 25.740 | 439 | 263 | 16 | 3 | 395 | 13 | 434 | 1.75e-13 | 72.4 |
MS.gene64993.t1 | MTR_1g107385 | 25.277 | 451 | 247 | 18 | 6 | 425 | 29 | 420 | 2.02e-13 | 72.0 |
MS.gene64993.t1 | MTR_5g008920 | 32.020 | 203 | 116 | 9 | 1 | 193 | 1 | 191 | 3.67e-13 | 71.2 |
MS.gene64993.t1 | MTR_5g073420 | 34.021 | 194 | 108 | 11 | 7 | 189 | 9 | 193 | 3.98e-13 | 70.9 |
MS.gene64993.t1 | MTR_1g115245 | 35.220 | 159 | 92 | 6 | 3 | 156 | 18 | 170 | 4.84e-13 | 70.1 |
MS.gene64993.t1 | MTR_2g005990 | 33.831 | 201 | 109 | 10 | 7 | 189 | 4 | 198 | 4.93e-13 | 70.9 |
MS.gene64993.t1 | MTR_1089s0010 | 33.577 | 137 | 83 | 4 | 297 | 428 | 246 | 379 | 5.53e-13 | 70.5 |
MS.gene64993.t1 | MTR_2g091145 | 26.128 | 421 | 264 | 18 | 3 | 395 | 7 | 408 | 7.84e-13 | 70.5 |
MS.gene64993.t1 | MTR_5g012840 | 30.890 | 191 | 102 | 8 | 243 | 428 | 153 | 318 | 1.28e-12 | 68.9 |
MS.gene64993.t1 | MTR_7g032370 | 32.847 | 137 | 84 | 3 | 299 | 428 | 217 | 352 | 1.37e-12 | 68.9 |
MS.gene64993.t1 | MTR_7g032370 | 31.111 | 180 | 107 | 7 | 20 | 192 | 1 | 170 | 1.02e-11 | 66.2 |
MS.gene64993.t1 | MTR_7g023310 | 24.434 | 442 | 257 | 16 | 8 | 403 | 25 | 435 | 1.37e-12 | 69.7 |
MS.gene64993.t1 | MTR_7g098510 | 33.571 | 140 | 83 | 2 | 296 | 428 | 255 | 391 | 1.42e-12 | 69.3 |
MS.gene64993.t1 | MTR_2g072530 | 22.944 | 462 | 302 | 15 | 5 | 432 | 9 | 450 | 2.06e-12 | 68.9 |
MS.gene64993.t1 | MTR_7g056420 | 31.053 | 190 | 99 | 8 | 1 | 189 | 1 | 159 | 2.88e-12 | 69.3 |
MS.gene64993.t1 | MTR_7g055943 | 31.658 | 199 | 109 | 12 | 4 | 189 | 35 | 219 | 3.29e-12 | 68.6 |
MS.gene64993.t1 | MTR_4g080773 | 25.339 | 442 | 261 | 16 | 3 | 395 | 13 | 434 | 5.20e-12 | 68.2 |
MS.gene64993.t1 | MTR_3g110010 | 33.679 | 193 | 108 | 10 | 8 | 193 | 12 | 191 | 6.34e-12 | 68.2 |
MS.gene64993.t1 | MTR_3g109982 | 33.679 | 193 | 108 | 10 | 8 | 193 | 12 | 191 | 7.98e-12 | 67.8 |
MS.gene64993.t1 | MTR_4g024770 | 50.000 | 60 | 26 | 2 | 3 | 59 | 15 | 73 | 1.20e-11 | 60.8 |
MS.gene64993.t1 | MTR_5g040850 | 32.547 | 212 | 117 | 12 | 9 | 201 | 7 | 211 | 2.34e-11 | 65.9 |
MS.gene64993.t1 | MTR_5g054920 | 29.358 | 109 | 75 | 1 | 291 | 397 | 71 | 179 | 3.68e-11 | 62.4 |
MS.gene64993.t1 | MTR_5g008910 | 36.585 | 82 | 48 | 1 | 347 | 428 | 225 | 302 | 5.25e-11 | 63.9 |
MS.gene64993.t1 | MTR_3g105060 | 32.738 | 168 | 97 | 7 | 9 | 171 | 14 | 170 | 5.99e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64993.t1 | AT5G56420 | 27.033 | 455 | 265 | 19 | 6 | 428 | 3 | 422 | 1.55e-24 | 105 |
MS.gene64993.t1 | AT5G56420 | 27.033 | 455 | 265 | 19 | 6 | 428 | 3 | 422 | 1.55e-24 | 105 |
MS.gene64993.t1 | AT5G56420 | 27.033 | 455 | 265 | 19 | 6 | 428 | 3 | 422 | 1.55e-24 | 105 |
MS.gene64993.t1 | AT4G10400 | 26.984 | 441 | 266 | 15 | 9 | 427 | 2 | 408 | 9.88e-23 | 100 |
MS.gene64993.t1 | AT4G10400 | 26.984 | 441 | 266 | 15 | 9 | 427 | 2 | 408 | 9.88e-23 | 100 |
MS.gene64993.t1 | AT4G10400 | 26.984 | 441 | 266 | 15 | 9 | 427 | 2 | 408 | 9.88e-23 | 100 |
MS.gene64993.t1 | AT4G26340 | 28.764 | 445 | 265 | 20 | 9 | 428 | 2 | 419 | 1.64e-21 | 96.7 |
MS.gene64993.t1 | AT3G50710 | 25.551 | 454 | 276 | 17 | 9 | 428 | 2 | 427 | 2.62e-21 | 95.9 |
MS.gene64993.t1 | AT5G56440 | 27.333 | 450 | 274 | 17 | 9 | 427 | 2 | 429 | 1.22e-19 | 90.9 |
MS.gene64993.t1 | AT3G42770 | 27.045 | 440 | 268 | 18 | 11 | 420 | 1 | 417 | 2.57e-19 | 90.5 |
MS.gene64993.t1 | AT2G26030 | 25.696 | 467 | 270 | 21 | 9 | 425 | 4 | 443 | 3.17e-19 | 90.1 |
MS.gene64993.t1 | AT5G56560 | 25.390 | 449 | 273 | 19 | 8 | 428 | 4 | 418 | 4.48e-18 | 86.3 |
MS.gene64993.t1 | AT5G56400 | 26.682 | 446 | 288 | 15 | 4 | 428 | 28 | 455 | 6.74e-18 | 85.9 |
MS.gene64993.t1 | AT4G13965 | 26.562 | 448 | 261 | 19 | 9 | 425 | 10 | 420 | 8.02e-18 | 85.5 |
MS.gene64993.t1 | AT5G56820 | 27.009 | 448 | 263 | 18 | 6 | 425 | 12 | 423 | 1.00e-17 | 85.5 |
MS.gene64993.t1 | AT5G56370 | 27.069 | 447 | 270 | 15 | 9 | 427 | 2 | 420 | 1.44e-17 | 84.7 |
MS.gene64993.t1 | AT5G56370 | 27.069 | 447 | 270 | 15 | 9 | 427 | 2 | 420 | 1.44e-17 | 84.7 |
MS.gene64993.t1 | AT3G59200 | 36.224 | 196 | 103 | 10 | 7 | 189 | 5 | 191 | 4.80e-17 | 82.8 |
MS.gene64993.t1 | AT3G52680 | 28.913 | 460 | 260 | 20 | 7 | 429 | 19 | 448 | 6.30e-17 | 83.2 |
MS.gene64993.t1 | AT3G59200 | 35.897 | 195 | 105 | 9 | 7 | 189 | 5 | 191 | 9.95e-17 | 82.8 |
MS.gene64993.t1 | AT5G38570 | 24.943 | 437 | 247 | 16 | 9 | 427 | 2 | 375 | 3.65e-16 | 80.1 |
MS.gene64993.t1 | AT4G00160 | 27.632 | 456 | 271 | 20 | 7 | 428 | 14 | 444 | 4.75e-16 | 80.5 |
MS.gene64993.t1 | AT5G50270 | 28.125 | 416 | 247 | 19 | 9 | 395 | 2 | 394 | 5.11e-16 | 80.1 |
MS.gene64993.t1 | AT1G66310 | 27.716 | 451 | 262 | 21 | 9 | 425 | 19 | 439 | 1.58e-15 | 78.6 |
MS.gene64993.t1 | AT5G22660 | 26.261 | 476 | 261 | 20 | 2 | 425 | 6 | 443 | 3.65e-15 | 77.8 |
MS.gene64993.t1 | AT4G14103 | 32.308 | 195 | 112 | 7 | 6 | 189 | 5 | 190 | 6.57e-15 | 76.6 |
MS.gene64993.t1 | AT4G14103 | 32.308 | 195 | 112 | 7 | 6 | 189 | 5 | 190 | 7.06e-15 | 76.3 |
MS.gene64993.t1 | AT4G14103 | 32.308 | 195 | 112 | 7 | 6 | 189 | 5 | 190 | 7.06e-15 | 76.3 |
MS.gene64993.t1 | AT1G78760 | 25.586 | 469 | 272 | 23 | 4 | 429 | 11 | 445 | 1.44e-14 | 75.9 |
MS.gene64993.t1 | AT3G59230 | 31.313 | 198 | 115 | 5 | 8 | 189 | 11 | 203 | 1.48e-14 | 75.9 |
MS.gene64993.t1 | AT5G56810 | 27.394 | 449 | 268 | 18 | 6 | 425 | 12 | 431 | 4.01e-14 | 74.3 |
MS.gene64993.t1 | AT5G53635 | 26.339 | 448 | 275 | 14 | 11 | 427 | 2 | 425 | 6.18e-14 | 73.6 |
MS.gene64993.t1 | AT5G38590 | 25.114 | 438 | 257 | 19 | 9 | 413 | 2 | 401 | 1.16e-13 | 72.8 |
MS.gene64993.t1 | AT4G09920 | 30.688 | 189 | 113 | 7 | 9 | 189 | 2 | 180 | 1.33e-13 | 72.0 |
MS.gene64993.t1 | AT4G09920 | 30.688 | 189 | 113 | 7 | 9 | 189 | 2 | 180 | 1.33e-13 | 72.0 |
MS.gene64993.t1 | AT3G49030 | 26.593 | 455 | 281 | 20 | 3 | 430 | 15 | 443 | 1.60e-13 | 72.4 |
MS.gene64993.t1 | AT5G22610 | 23.661 | 448 | 287 | 15 | 6 | 426 | 15 | 434 | 1.68e-13 | 72.4 |
MS.gene64993.t1 | AT4G09920 | 30.688 | 189 | 113 | 7 | 9 | 189 | 2 | 180 | 1.99e-13 | 70.9 |
MS.gene64993.t1 | AT4G09920 | 30.688 | 189 | 113 | 7 | 9 | 189 | 2 | 180 | 1.99e-13 | 70.9 |
MS.gene64993.t1 | AT4G09920 | 30.688 | 189 | 113 | 7 | 9 | 189 | 2 | 180 | 1.99e-13 | 70.9 |
MS.gene64993.t1 | AT5G60610 | 25.791 | 411 | 249 | 16 | 9 | 392 | 2 | 383 | 2.08e-13 | 72.0 |
MS.gene64993.t1 | AT5G60610 | 25.791 | 411 | 249 | 16 | 9 | 392 | 2 | 383 | 2.08e-13 | 72.0 |
MS.gene64993.t1 | AT3G26930 | 29.011 | 455 | 262 | 19 | 6 | 428 | 18 | 443 | 2.16e-13 | 72.0 |
MS.gene64993.t1 | AT4G13985 | 25.263 | 475 | 260 | 21 | 9 | 425 | 19 | 456 | 2.80e-13 | 72.0 |
MS.gene64993.t1 | AT5G56410 | 26.150 | 413 | 264 | 14 | 16 | 397 | 10 | 412 | 3.56e-13 | 71.6 |
MS.gene64993.t1 | AT1G66290 | 25.835 | 449 | 274 | 21 | 9 | 425 | 29 | 450 | 3.83e-13 | 71.2 |
MS.gene64993.t1 | AT1G32375 | 32.870 | 216 | 119 | 9 | 9 | 212 | 2 | 203 | 6.31e-13 | 70.5 |
MS.gene64993.t1 | AT1G32375 | 32.870 | 216 | 119 | 9 | 9 | 212 | 2 | 203 | 6.31e-13 | 70.5 |
MS.gene64993.t1 | AT4G14096 | 31.771 | 192 | 115 | 7 | 6 | 189 | 5 | 188 | 1.08e-12 | 70.1 |
MS.gene64993.t1 | AT4G14096 | 31.771 | 192 | 115 | 7 | 6 | 189 | 5 | 188 | 1.08e-12 | 70.1 |
MS.gene64993.t1 | AT4G00315 | 32.804 | 189 | 113 | 6 | 9 | 189 | 2 | 184 | 1.10e-12 | 70.1 |
MS.gene64993.t1 | AT1G55660 | 32.308 | 195 | 114 | 8 | 5 | 189 | 49 | 235 | 1.13e-12 | 69.3 |
MS.gene64993.t1 | AT3G49030 | 26.106 | 452 | 261 | 21 | 3 | 430 | 15 | 417 | 1.45e-12 | 69.3 |
MS.gene64993.t1 | AT5G53640 | 31.944 | 216 | 98 | 9 | 1 | 189 | 1 | 194 | 1.50e-12 | 67.4 |
MS.gene64993.t1 | AT1G55660 | 32.308 | 195 | 114 | 8 | 5 | 189 | 49 | 235 | 1.87e-12 | 69.3 |
MS.gene64993.t1 | AT2G26860 | 26.150 | 413 | 255 | 15 | 9 | 392 | 2 | 393 | 4.19e-12 | 68.2 |
MS.gene64993.t1 | AT2G26860 | 26.150 | 413 | 255 | 15 | 9 | 392 | 2 | 393 | 4.19e-12 | 68.2 |
MS.gene64993.t1 | AT3G59170 | 31.364 | 220 | 115 | 9 | 7 | 193 | 5 | 221 | 5.60e-12 | 67.8 |
MS.gene64993.t1 | AT1G49610 | 29.787 | 188 | 87 | 7 | 9 | 196 | 26 | 168 | 6.91e-12 | 67.0 |
MS.gene64993.t1 | AT3G58940 | 31.694 | 183 | 96 | 7 | 9 | 171 | 2 | 175 | 9.89e-12 | 67.4 |
MS.gene64993.t1 | AT3G58940 | 31.694 | 183 | 96 | 7 | 9 | 171 | 2 | 175 | 9.89e-12 | 67.4 |
MS.gene64993.t1 | AT3G51530 | 25.537 | 419 | 257 | 16 | 7 | 398 | 28 | 418 | 1.29e-11 | 66.6 |
MS.gene64993.t1 | AT3G52680 | 34.634 | 205 | 106 | 9 | 3 | 194 | 15 | 204 | 2.12e-11 | 65.5 |
MS.gene64993.t1 | AT3G44090 | 30.303 | 231 | 125 | 11 | 11 | 226 | 26 | 235 | 5.94e-11 | 64.7 |
Find 107 sgRNAs with CRISPR-Local
Find 126 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCGGCTGCCATGTTCTTAA+AGG | 0.277720 | 8.4:-39632554 | None:intergenic |
TGATATTTCCAGTTTCATTA+AGG | 0.298410 | 8.4:-39632011 | None:intergenic |
CATTGGCCATTTCCACAGTA+TGG | 0.333347 | 8.4:+39632044 | MS.gene64993:CDS |
CATCGTAGCTACGGAGGTTC+TGG | 0.347202 | 8.4:-39631306 | None:intergenic |
TGAAACTGGAAATATCAAAT+TGG | 0.357830 | 8.4:+39632017 | MS.gene64993:CDS |
CAGGACATTCGAGTTGAAAC+AGG | 0.370609 | 8.4:-39632347 | None:intergenic |
CTCGGAGGTGTTTGAGAATA+GGG | 0.373089 | 8.4:-39632116 | None:intergenic |
ACTCTCTGGCTGCCCCGGCC+TGG | 0.377441 | 8.4:+39631864 | MS.gene64993:CDS |
CTCGCCGGTGGCGTTATCTC+TGG | 0.383892 | 8.4:+39631339 | MS.gene64993:CDS |
GACCCAGTTGTCTCTCGTTA+AGG | 0.389452 | 8.4:+39632809 | MS.gene64993:CDS |
TTCGTGTCATTCAACATCTA+AGG | 0.391135 | 8.4:+39632164 | MS.gene64993:CDS |
GCCGGGGCAGCCAGAGAGTA+AGG | 0.393311 | 8.4:-39631860 | None:intergenic |
TCACCTTAACGAGAGACAAC+TGG | 0.395455 | 8.4:-39632812 | None:intergenic |
TGGAGTTACCTTAATGAAAC+TGG | 0.398797 | 8.4:+39632003 | MS.gene64993:CDS |
AGGTGGGATTTGAGACATTC+AGG | 0.399944 | 8.4:-39632590 | None:intergenic |
TTGTGGATCCTTGCTGCCAC+TGG | 0.401466 | 8.4:+39631551 | MS.gene64993:CDS |
TTTGAATGTCGCGGGATTTG+CGG | 0.402806 | 8.4:-39631469 | None:intergenic |
CTTCCACCATACTGTGGAAA+TGG | 0.406312 | 8.4:-39632050 | None:intergenic |
TCAGAAGTTGCCTTACTCTC+TGG | 0.409070 | 8.4:+39631850 | MS.gene64993:CDS |
ACAATTGAATAGAGTCGAAT+AGG | 0.410599 | 8.4:-39631532 | None:intergenic |
TAGACAGCTCAATCTGTCTT+TGG | 0.416873 | 8.4:-39631243 | None:intergenic |
GCACAAATCTTGTTTCTCTC+AGG | 0.423152 | 8.4:+39631648 | MS.gene64993:CDS |
ATATCCTTCTATGTGAATAT+AGG | 0.424387 | 8.4:-39632615 | None:intergenic |
AATATCAAATTGGCCATCAT+TGG | 0.425497 | 8.4:+39632027 | MS.gene64993:CDS |
GGATTTCGATCTCTTGGAGC+TGG | 0.432007 | 8.4:-39631956 | None:intergenic |
CTGACCTATATTCACATAGA+AGG | 0.433553 | 8.4:+39632611 | MS.gene64993:CDS |
TCTCGGAGGTGTTTGAGAAT+AGG | 0.436391 | 8.4:-39632117 | None:intergenic |
AGAAGTTTGGTGACATAGTC+CGG | 0.439373 | 8.4:-39631919 | None:intergenic |
AGTAACCATCGAAAGTTTCC+AGG | 0.449929 | 8.4:-39631882 | None:intergenic |
GCCTTACTCTCTGGCTGCCC+CGG | 0.454749 | 8.4:+39631859 | MS.gene64993:CDS |
AGTGGTGGATTTCGATCTCT+TGG | 0.460719 | 8.4:-39631962 | None:intergenic |
TCATATACTCTTTGCGATCT+CGG | 0.462793 | 8.4:-39632134 | None:intergenic |
ATATATAATCTCTTCAATGA+TGG | 0.467974 | 8.4:-39631808 | None:intergenic |
CTCACTATCACCTATCCATT+CGG | 0.478226 | 8.4:+39631500 | MS.gene64993:CDS |
TGGGTCAAATTTAAGTTGGC+AGG | 0.480559 | 8.4:-39632792 | None:intergenic |
GGAAGGTGGAATGAGAAGTT+TGG | 0.482287 | 8.4:-39631932 | None:intergenic |
TGAAGTAAATTGCGAAACTC+TGG | 0.482988 | 8.4:-39632307 | None:intergenic |
CGTCGGAGAAGTCGAAGACT+TGG | 0.485808 | 8.4:-39631370 | None:intergenic |
ATATGCAACAAGAGCGAGTC+CGG | 0.490729 | 8.4:-39631266 | None:intergenic |
TATTCGACTCTATTCAATTG+TGG | 0.493927 | 8.4:+39631534 | MS.gene64993:CDS |
CCATCGAAAGTTTCCAGGCC+GGG | 0.498848 | 8.4:-39631877 | None:intergenic |
CTTCTATGTGAATATAGGTC+AGG | 0.500493 | 8.4:-39632610 | None:intergenic |
TCTCATAATTCAAAGCAAGA+AGG | 0.505625 | 8.4:+39632405 | MS.gene64993:CDS |
CAACTGGGTCAAATTTAAGT+TGG | 0.507227 | 8.4:-39632796 | None:intergenic |
GATCTCTTGGAGCTGGAGGA+AGG | 0.507584 | 8.4:-39631949 | None:intergenic |
GAAAGGAGGGAGGGTTATTG+CGG | 0.510199 | 8.4:-39631612 | None:intergenic |
CGGCGAGAGAGAGTTCTTGA+AGG | 0.511886 | 8.4:-39631580 | None:intergenic |
ATTCACATAGAAGGATATCA+AGG | 0.515119 | 8.4:+39632620 | MS.gene64993:CDS |
TTCTTGAAGGTGAGGGCCAG+TGG | 0.517112 | 8.4:-39631567 | None:intergenic |
CTGACAATTTCACCTGGAGC+TGG | 0.518959 | 8.4:+39631983 | MS.gene64993:CDS |
CTGTTTCAACTCGAATGTCC+TGG | 0.520806 | 8.4:+39632348 | MS.gene64993:CDS |
GGTTATTGCGGAGTCCTTGA+CGG | 0.524165 | 8.4:-39631600 | None:intergenic |
CACCTTAACGAGAGACAACT+GGG | 0.527843 | 8.4:-39632811 | None:intergenic |
GAATGTCGCGGGATTTGCGG+AGG | 0.534092 | 8.4:-39631466 | None:intergenic |
ATTAAGGTAACTCCAGCTCC+AGG | 0.538006 | 8.4:-39631995 | None:intergenic |
ACCTTTAAGAACATGGCAGC+CGG | 0.545276 | 8.4:+39632553 | MS.gene64993:CDS |
TCAGGAACCGTTGTTGACTC+CGG | 0.545420 | 8.4:-39632572 | None:intergenic |
ACCATCGAAAGTTTCCAGGC+CGG | 0.545971 | 8.4:-39631878 | None:intergenic |
GACAAATTCGCTTTCAACTG+AGG | 0.546013 | 8.4:-39632091 | None:intergenic |
ATTTCTCAAGCACGTTGACC+AGG | 0.546076 | 8.4:-39632366 | None:intergenic |
AGAGAGAGTTCTTGAAGGTG+AGG | 0.548677 | 8.4:-39631575 | None:intergenic |
CGATGAGTCTCGTCTCTCGC+CGG | 0.554372 | 8.4:+39631324 | MS.gene64993:CDS |
AGACAGATTGAGCTGTCTAC+CGG | 0.560720 | 8.4:+39631247 | MS.gene64993:CDS |
CTACGGAGGTTCTGGTAGGA+AGG | 0.563860 | 8.4:-39631298 | None:intergenic |
TTTCGATCTCTTGGAGCTGG+AGG | 0.565969 | 8.4:-39631953 | None:intergenic |
CATCGAAAGTTTCCAGGCCG+GGG | 0.568832 | 8.4:-39631876 | None:intergenic |
CCACCACTGACAATTTCACC+TGG | 0.571233 | 8.4:+39631977 | MS.gene64993:CDS |
AGAACTCTCTCTCGCCGTCA+AGG | 0.572716 | 8.4:+39631586 | MS.gene64993:CDS |
GAGAGAGTTCTTGAAGGTGA+GGG | 0.575203 | 8.4:-39631574 | None:intergenic |
CTATGTGAATATAGGTCAGG+TGG | 0.580589 | 8.4:-39632607 | None:intergenic |
GAACATGCCACCGAATGGAT+AGG | 0.581081 | 8.4:-39631510 | None:intergenic |
GACGAGACTCATCGTAGCTA+CGG | 0.584840 | 8.4:-39631315 | None:intergenic |
CCAGGTGAAATTGTCAGTGG+TGG | 0.585148 | 8.4:-39631977 | None:intergenic |
AAGATTAACTGATATACCAA+GGG | 0.586408 | 8.4:+39632760 | MS.gene64993:CDS |
CCGGTGGCGTTATCTCTGGA+AGG | 0.590496 | 8.4:+39631343 | MS.gene64993:CDS |
GGAGGTTCTGGTAGGAAGGA+AGG | 0.592255 | 8.4:-39631294 | None:intergenic |
AATTATCACCTTTAAGAACA+TGG | 0.595449 | 8.4:+39632546 | MS.gene64993:CDS |
AATAGGAACATGCCACCGAA+TGG | 0.595662 | 8.4:-39631515 | None:intergenic |
CCCGGCCTGGAAACTTTCGA+TGG | 0.597496 | 8.4:+39631877 | MS.gene64993:CDS |
TGGCCATTTCCACAGTATGG+TGG | 0.597988 | 8.4:+39632047 | MS.gene64993:CDS |
AATGTCGCGGGATTTGCGGA+GGG | 0.602470 | 8.4:-39631465 | None:intergenic |
TGAGTCTCGTCTCTCGCCGG+TGG | 0.605450 | 8.4:+39631327 | MS.gene64993:CDS |
TTTGTAACATAGCGACTCGT+CGG | 0.610095 | 8.4:-39631387 | None:intergenic |
ACTGTGGAAATGGCCAATGA+TGG | 0.610943 | 8.4:-39632040 | None:intergenic |
TGGCAGGTGACAGAGCCCCT+TGG | 0.611510 | 8.4:-39632776 | None:intergenic |
AAAGATTAACTGATATACCA+AGG | 0.612225 | 8.4:+39632759 | MS.gene64993:CDS |
TTTAGAACAGTGGCATGAAG+TGG | 0.614365 | 8.4:-39632280 | None:intergenic |
CTCTTGGAGCTGGAGGAAGG+TGG | 0.615652 | 8.4:-39631946 | None:intergenic |
GGTGAGGGCCAGTGGCAGCA+AGG | 0.616020 | 8.4:-39631559 | None:intergenic |
GTAGCTACGGAGGTTCTGGT+AGG | 0.629988 | 8.4:-39631302 | None:intergenic |
TATGTGAATATAGGTCAGGT+GGG | 0.640734 | 8.4:-39632606 | None:intergenic |
CTCTGGATAGTTTAGAACAG+TGG | 0.647378 | 8.4:-39632290 | None:intergenic |
CCTTCCAGAGATAACGCCAC+CGG | 0.649705 | 8.4:-39631343 | None:intergenic |
GTTTGGTGACATAGTCCGGA+GGG | 0.653362 | 8.4:-39631915 | None:intergenic |
GAAATGCTTCCACCATACTG+TGG | 0.660794 | 8.4:-39632056 | None:intergenic |
AAGAGATTATATATCGACGT+AGG | 0.665926 | 8.4:+39631817 | MS.gene64993:CDS |
AGGACATTCGAGTTGAAACA+GGG | 0.672325 | 8.4:-39632346 | None:intergenic |
ACTATCACCTATCCATTCGG+TGG | 0.673109 | 8.4:+39631503 | MS.gene64993:CDS |
GCTCCAGGTGAAATTGTCAG+TGG | 0.674603 | 8.4:-39631980 | None:intergenic |
TATACTCTTTGCGATCTCGG+AGG | 0.680932 | 8.4:-39632131 | None:intergenic |
CGTAATCGACGATGGCACGA+CGG | 0.680995 | 8.4:+39631213 | None:intergenic |
TTATGAGAACTTGAAGCATG+TGG | 0.695487 | 8.4:-39632390 | None:intergenic |
AGTTTGGTGACATAGTCCGG+AGG | 0.698297 | 8.4:-39631916 | None:intergenic |
ATGGCAGCCGGAGTCAACAA+CGG | 0.700697 | 8.4:+39632565 | MS.gene64993:CDS |
TGATACTTCAATGTACACAA+CGG | 0.705251 | 8.4:+39632718 | MS.gene64993:CDS |
GAGACTCATCGTAGCTACGG+AGG | 0.713528 | 8.4:-39631312 | None:intergenic |
AGATTAACTGATATACCAAG+GGG | 0.725053 | 8.4:+39632761 | MS.gene64993:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AGTTTAATTAAATCAATTTT+TGG | + | chr8.4:39632443-39632462 | MS.gene64993:intron | 10.0% |
!!! | ACACAAAAATATATTTTTGA+GGG | + | chr8.4:39632499-39632518 | MS.gene64993:intron | 15.0% |
!!! | AGATATTACAATTTTCTTTT+TGG | - | chr8.4:39631684-39631703 | None:intergenic | 15.0% |
!!! | TACACAAAAATATATTTTTG+AGG | + | chr8.4:39632498-39632517 | MS.gene64993:intron | 15.0% |
!! | AATTGATTAAAAAGAAAGGA+GGG | - | chr8.4:39631628-39631647 | None:intergenic | 20.0% |
!! | ATATATAATCTCTTCAATGA+TGG | - | chr8.4:39631811-39631830 | None:intergenic | 20.0% |
!!! | AAGGTGAAGTTTTATTTTTA+TGG | + | chr8.4:39632183-39632202 | MS.gene64993:intron | 20.0% |
! | AAAGATTAACTGATATACCA+AGG | + | chr8.4:39632759-39632778 | MS.gene64993:CDS | 25.0% |
! | AAGATTAACTGATATACCAA+GGG | + | chr8.4:39632760-39632779 | MS.gene64993:CDS | 25.0% |
! | ATATCCTTCTATGTGAATAT+AGG | - | chr8.4:39632618-39632637 | None:intergenic | 25.0% |
! | CAATTGATTAAAAAGAAAGG+AGG | - | chr8.4:39631629-39631648 | None:intergenic | 25.0% |
! | GTGCAATTGATTAAAAAGAA+AGG | - | chr8.4:39631632-39631651 | None:intergenic | 25.0% |
! | TGAAACTGGAAATATCAAAT+TGG | + | chr8.4:39632017-39632036 | MS.gene64993:CDS | 25.0% |
! | TGATATTTCCAGTTTCATTA+AGG | - | chr8.4:39632014-39632033 | None:intergenic | 25.0% |
!! | AATTATCACCTTTAAGAACA+TGG | + | chr8.4:39632546-39632565 | MS.gene64993:CDS | 25.0% |
AAGAGATTATATATCGACGT+AGG | + | chr8.4:39631817-39631836 | MS.gene64993:CDS | 30.0% | |
AATATCAAATTGGCCATCAT+TGG | + | chr8.4:39632027-39632046 | MS.gene64993:CDS | 30.0% | |
ACAATTGAATAGAGTCGAAT+AGG | - | chr8.4:39631535-39631554 | None:intergenic | 30.0% | |
AGATTAACTGATATACCAAG+GGG | + | chr8.4:39632761-39632780 | MS.gene64993:CDS | 30.0% | |
ATTCACATAGAAGGATATCA+AGG | + | chr8.4:39632620-39632639 | MS.gene64993:CDS | 30.0% | |
TACATGATAACAACAAGTGA+TGG | - | chr8.4:39632250-39632269 | None:intergenic | 30.0% | |
TATTCGACTCTATTCAATTG+TGG | + | chr8.4:39631534-39631553 | MS.gene64993:CDS | 30.0% | |
TCTCATAATTCAAAGCAAGA+AGG | + | chr8.4:39632405-39632424 | MS.gene64993:CDS | 30.0% | |
TGATACTTCAATGTACACAA+CGG | + | chr8.4:39632718-39632737 | MS.gene64993:CDS | 30.0% | |
! | ATTGAATTTTTGAATGTCGC+GGG | - | chr8.4:39631480-39631499 | None:intergenic | 30.0% |
! | CAGTTAATCTTTTGACAGAA+TGG | - | chr8.4:39632751-39632770 | None:intergenic | 30.0% |
! | GATTGAATTTTTGAATGTCG+CGG | - | chr8.4:39631481-39631500 | None:intergenic | 30.0% |
!! | CATTTGCTGAATATCTTTTG+AGG | + | chr8.4:39632660-39632679 | MS.gene64993:CDS | 30.0% |
CAACTGGGTCAAATTTAAGT+TGG | - | chr8.4:39632799-39632818 | None:intergenic | 35.0% | |
CTGACCTATATTCACATAGA+AGG | + | chr8.4:39632611-39632630 | MS.gene64993:CDS | 35.0% | |
CTTCTATGTGAATATAGGTC+AGG | - | chr8.4:39632613-39632632 | None:intergenic | 35.0% | |
GATTAAAAAGAAAGGAGGGA+GGG | - | chr8.4:39631624-39631643 | None:intergenic | 35.0% | |
TATGTGAATATAGGTCAGGT+GGG | - | chr8.4:39632609-39632628 | None:intergenic | 35.0% | |
TCATATACTCTTTGCGATCT+CGG | - | chr8.4:39632137-39632156 | None:intergenic | 35.0% | |
TGAAGTAAATTGCGAAACTC+TGG | - | chr8.4:39632310-39632329 | None:intergenic | 35.0% | |
TGATTAAAAAGAAAGGAGGG+AGG | - | chr8.4:39631625-39631644 | None:intergenic | 35.0% | |
TGGAGTTACCTTAATGAAAC+TGG | + | chr8.4:39632003-39632022 | MS.gene64993:CDS | 35.0% | |
TTATGAGAACTTGAAGCATG+TGG | - | chr8.4:39632393-39632412 | None:intergenic | 35.0% | |
! | TTCGTGTCATTCAACATCTA+AGG | + | chr8.4:39632164-39632183 | MS.gene64993:CDS | 35.0% |
!! | GCTGAATATCTTTTGAGGAA+CGG | + | chr8.4:39632665-39632684 | MS.gene64993:CDS | 35.0% |
!!! | GGTGTTTTGAAAAGACAAAC+AGG | - | chr8.4:39631744-39631763 | None:intergenic | 35.0% |
AGTAACCATCGAAAGTTTCC+AGG | - | chr8.4:39631885-39631904 | None:intergenic | 40.0% | |
CTATGTGAATATAGGTCAGG+TGG | - | chr8.4:39632610-39632629 | None:intergenic | 40.0% | |
CTCACTATCACCTATCCATT+CGG | + | chr8.4:39631500-39631519 | MS.gene64993:CDS | 40.0% | |
GACAAATTCGCTTTCAACTG+AGG | - | chr8.4:39632094-39632113 | None:intergenic | 40.0% | |
TAGACAGCTCAATCTGTCTT+TGG | - | chr8.4:39631246-39631265 | None:intergenic | 40.0% | |
TTTGTAACATAGCGACTCGT+CGG | - | chr8.4:39631390-39631409 | None:intergenic | 40.0% | |
! | AGAAGTTTGGTGACATAGTC+CGG | - | chr8.4:39631922-39631941 | None:intergenic | 40.0% |
! | CTCTGGATAGTTTAGAACAG+TGG | - | chr8.4:39632293-39632312 | None:intergenic | 40.0% |
! | GCACAAATCTTGTTTCTCTC+AGG | + | chr8.4:39631648-39631667 | MS.gene64993:CDS | 40.0% |
! | TTTAGAACAGTGGCATGAAG+TGG | - | chr8.4:39632283-39632302 | None:intergenic | 40.0% |
!! | AGGACATTCGAGTTGAAACA+GGG | - | chr8.4:39632349-39632368 | None:intergenic | 40.0% |
!! | TGGGTCAAATTTAAGTTGGC+AGG | - | chr8.4:39632795-39632814 | None:intergenic | 40.0% |
!! | TTACTTTTGCTTTCACCCTC+CGG | + | chr8.4:39631900-39631919 | MS.gene64993:CDS | 40.0% |
AATAGGAACATGCCACCGAA+TGG | - | chr8.4:39631518-39631537 | None:intergenic | 45.0% | |
ACTATCACCTATCCATTCGG+TGG | + | chr8.4:39631503-39631522 | MS.gene64993:CDS | 45.0% | |
ACTGTGGAAATGGCCAATGA+TGG | - | chr8.4:39632043-39632062 | None:intergenic | 45.0% | |
AGACAGATTGAGCTGTCTAC+CGG | + | chr8.4:39631247-39631266 | MS.gene64993:CDS | 45.0% | |
AGAGAGAGTTCTTGAAGGTG+AGG | - | chr8.4:39631578-39631597 | None:intergenic | 45.0% | |
ATATGCAACAAGAGCGAGTC+CGG | - | chr8.4:39631269-39631288 | None:intergenic | 45.0% | |
ATTAAGGTAACTCCAGCTCC+AGG | - | chr8.4:39631998-39632017 | None:intergenic | 45.0% | |
ATTTCTCAAGCACGTTGACC+AGG | - | chr8.4:39632369-39632388 | None:intergenic | 45.0% | |
CATTGGCCATTTCCACAGTA+TGG | + | chr8.4:39632044-39632063 | MS.gene64993:CDS | 45.0% | |
CTGTTTCAACTCGAATGTCC+TGG | + | chr8.4:39632348-39632367 | MS.gene64993:CDS | 45.0% | |
CTTCCACCATACTGTGGAAA+TGG | - | chr8.4:39632053-39632072 | None:intergenic | 45.0% | |
GAAATGCTTCCACCATACTG+TGG | - | chr8.4:39632059-39632078 | None:intergenic | 45.0% | |
GAACTTCACACTCAAGTCTG+TGG | - | chr8.4:39631765-39631784 | None:intergenic | 45.0% | |
GAGAGAGTTCTTGAAGGTGA+GGG | - | chr8.4:39631577-39631596 | None:intergenic | 45.0% | |
GGAAGGTGGAATGAGAAGTT+TGG | - | chr8.4:39631935-39631954 | None:intergenic | 45.0% | |
TATACTCTTTGCGATCTCGG+AGG | - | chr8.4:39632134-39632153 | None:intergenic | 45.0% | |
TCAGAAGTTGCCTTACTCTC+TGG | + | chr8.4:39631850-39631869 | MS.gene64993:CDS | 45.0% | |
TTTGAATGTCGCGGGATTTG+CGG | - | chr8.4:39631472-39631491 | None:intergenic | 45.0% | |
! | ACCTTTAAGAACATGGCAGC+CGG | + | chr8.4:39632553-39632572 | MS.gene64993:CDS | 45.0% |
! | AGGTGGGATTTGAGACATTC+AGG | - | chr8.4:39632593-39632612 | None:intergenic | 45.0% |
! | TGAGGGTTGTCTCTTGTTGT+TGG | + | chr8.4:39632516-39632535 | MS.gene64993:intron | 45.0% |
!! | AGTGGTGGATTTCGATCTCT+TGG | - | chr8.4:39631965-39631984 | None:intergenic | 45.0% |
!! | CAGGACATTCGAGTTGAAAC+AGG | - | chr8.4:39632350-39632369 | None:intergenic | 45.0% |
!! | CTCGGAGGTGTTTGAGAATA+GGG | - | chr8.4:39632119-39632138 | None:intergenic | 45.0% |
!! | GGTTGTCTCTTGTTGTTGGT+AGG | + | chr8.4:39632520-39632539 | MS.gene64993:intron | 45.0% |
!! | TCTCGGAGGTGTTTGAGAAT+AGG | - | chr8.4:39632120-39632139 | None:intergenic | 45.0% |
!! | TGTCTCTTGTTGTTGGTAGG+AGG | + | chr8.4:39632523-39632542 | MS.gene64993:intron | 45.0% |
ACCATCGAAAGTTTCCAGGC+CGG | - | chr8.4:39631881-39631900 | None:intergenic | 50.0% | |
CCACCACTGACAATTTCACC+TGG | + | chr8.4:39631977-39631996 | MS.gene64993:CDS | 50.0% | |
CCAGGTGAAATTGTCAGTGG+TGG | - | chr8.4:39631980-39631999 | None:intergenic | 50.0% | |
CTGACAATTTCACCTGGAGC+TGG | + | chr8.4:39631983-39632002 | MS.gene64993:CDS | 50.0% | |
GAAAGGAGGGAGGGTTATTG+CGG | - | chr8.4:39631615-39631634 | None:intergenic | 50.0% | |
GAACATGCCACCGAATGGAT+AGG | - | chr8.4:39631513-39631532 | None:intergenic | 50.0% | |
GACGAGACTCATCGTAGCTA+CGG | - | chr8.4:39631318-39631337 | None:intergenic | 50.0% | |
GCTCCAGGTGAAATTGTCAG+TGG | - | chr8.4:39631983-39632002 | None:intergenic | 50.0% | |
GGATTTCGATCTCTTGGAGC+TGG | - | chr8.4:39631959-39631978 | None:intergenic | 50.0% | |
GGTTATTGCGGAGTCCTTGA+CGG | - | chr8.4:39631603-39631622 | None:intergenic | 50.0% | |
TCCGGCTGCCATGTTCTTAA+AGG | - | chr8.4:39632557-39632576 | None:intergenic | 50.0% | |
TGGCCATTTCCACAGTATGG+TGG | + | chr8.4:39632047-39632066 | MS.gene64993:CDS | 50.0% | |
TTTCGATCTCTTGGAGCTGG+AGG | - | chr8.4:39631956-39631975 | None:intergenic | 50.0% | |
! | AGTTTGGTGACATAGTCCGG+AGG | - | chr8.4:39631919-39631938 | None:intergenic | 50.0% |
! | GTTTGGTGACATAGTCCGGA+GGG | - | chr8.4:39631918-39631937 | None:intergenic | 50.0% |
!! | TCAGGAACCGTTGTTGACTC+CGG | - | chr8.4:39632575-39632594 | None:intergenic | 50.0% |
AATGTCGCGGGATTTGCGGA+GGG | - | chr8.4:39631468-39631487 | None:intergenic | 55.0% | |
AGAACTCTCTCTCGCCGTCA+AGG | + | chr8.4:39631586-39631605 | MS.gene64993:CDS | 55.0% | |
ATGGCAGCCGGAGTCAACAA+CGG | + | chr8.4:39632565-39632584 | MS.gene64993:CDS | 55.0% | |
CATCGAAAGTTTCCAGGCCG+GGG | - | chr8.4:39631879-39631898 | None:intergenic | 55.0% | |
CATCGTAGCTACGGAGGTTC+TGG | - | chr8.4:39631309-39631328 | None:intergenic | 55.0% | |
CCATCGAAAGTTTCCAGGCC+GGG | - | chr8.4:39631880-39631899 | None:intergenic | 55.0% | |
CCTTCCAGAGATAACGCCAC+CGG | - | chr8.4:39631346-39631365 | None:intergenic | 55.0% | |
CGGCGAGAGAGAGTTCTTGA+AGG | - | chr8.4:39631583-39631602 | None:intergenic | 55.0% | |
CGTCGGAGAAGTCGAAGACT+TGG | - | chr8.4:39631373-39631392 | None:intergenic | 55.0% | |
GAGACTCATCGTAGCTACGG+AGG | - | chr8.4:39631315-39631334 | None:intergenic | 55.0% | |
GATCTCTTGGAGCTGGAGGA+AGG | - | chr8.4:39631952-39631971 | None:intergenic | 55.0% | |
TTCTTGAAGGTGAGGGCCAG+TGG | - | chr8.4:39631570-39631589 | None:intergenic | 55.0% | |
TTGTGGATCCTTGCTGCCAC+TGG | + | chr8.4:39631551-39631570 | MS.gene64993:CDS | 55.0% | |
! | CTACGGAGGTTCTGGTAGGA+AGG | - | chr8.4:39631301-39631320 | None:intergenic | 55.0% |
! | GGAGGTTCTGGTAGGAAGGA+AGG | - | chr8.4:39631297-39631316 | None:intergenic | 55.0% |
! | GTAGCTACGGAGGTTCTGGT+AGG | - | chr8.4:39631305-39631324 | None:intergenic | 55.0% |
CAGTGGCATGAAGTGGCGAC+TGG | - | chr8.4:39632276-39632295 | None:intergenic | 60.0% | |
CCCGGCCTGGAAACTTTCGA+TGG | + | chr8.4:39631877-39631896 | MS.gene64993:CDS | 60.0% | |
CCGGTGGCGTTATCTCTGGA+AGG | + | chr8.4:39631343-39631362 | MS.gene64993:CDS | 60.0% | |
CGATGAGTCTCGTCTCTCGC+CGG | + | chr8.4:39631324-39631343 | MS.gene64993:CDS | 60.0% | |
CTCTTGGAGCTGGAGGAAGG+TGG | - | chr8.4:39631949-39631968 | None:intergenic | 60.0% | |
GAATGTCGCGGGATTTGCGG+AGG | - | chr8.4:39631469-39631488 | None:intergenic | 60.0% | |
CTCGCCGGTGGCGTTATCTC+TGG | + | chr8.4:39631339-39631358 | MS.gene64993:CDS | 65.0% | |
GCCTTACTCTCTGGCTGCCC+CGG | + | chr8.4:39631859-39631878 | MS.gene64993:CDS | 65.0% | |
TGAGTCTCGTCTCTCGCCGG+TGG | + | chr8.4:39631327-39631346 | MS.gene64993:CDS | 65.0% | |
TGGCAGGTGACAGAGCCCCT+TGG | - | chr8.4:39632779-39632798 | None:intergenic | 65.0% | |
GCCGGGGCAGCCAGAGAGTA+AGG | - | chr8.4:39631863-39631882 | None:intergenic | 70.0% | |
GGTGAGGGCCAGTGGCAGCA+AGG | - | chr8.4:39631562-39631581 | None:intergenic | 70.0% | |
ACTCTCTGGCTGCCCCGGCC+TGG | + | chr8.4:39631864-39631883 | MS.gene64993:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 39631224 | 39632829 | 39631224 | ID=MS.gene64993 |
chr8.4 | mRNA | 39631224 | 39632829 | 39631224 | ID=MS.gene64993.t1;Parent=MS.gene64993 |
chr8.4 | exon | 39631224 | 39631669 | 39631224 | ID=MS.gene64993.t1.exon1;Parent=MS.gene64993.t1 |
chr8.4 | CDS | 39631224 | 39631669 | 39631224 | ID=cds.MS.gene64993.t1;Parent=MS.gene64993.t1 |
chr8.4 | exon | 39631768 | 39632185 | 39631768 | ID=MS.gene64993.t1.exon2;Parent=MS.gene64993.t1 |
chr8.4 | CDS | 39631768 | 39632185 | 39631768 | ID=cds.MS.gene64993.t1;Parent=MS.gene64993.t1 |
chr8.4 | exon | 39632277 | 39632426 | 39632277 | ID=MS.gene64993.t1.exon3;Parent=MS.gene64993.t1 |
chr8.4 | CDS | 39632277 | 39632426 | 39632277 | ID=cds.MS.gene64993.t1;Parent=MS.gene64993.t1 |
chr8.4 | exon | 39632542 | 39632829 | 39632542 | ID=MS.gene64993.t1.exon4;Parent=MS.gene64993.t1 |
chr8.4 | CDS | 39632542 | 39632829 | 39632542 | ID=cds.MS.gene64993.t1;Parent=MS.gene64993.t1 |
Gene Sequence |
Protein sequence |