Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25353.t1 | XP_003628566.2 | 93.3 | 435 | 27 | 1 | 1 | 433 | 1 | 435 | 3.20E-233 | 817.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25353.t1 | Q9FM89 | 26.9 | 438 | 287 | 15 | 6 | 428 | 3 | 422 | 3.9e-22 | 107.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25353.t1 | G7LDT4 | 93.3 | 435 | 27 | 1 | 1 | 433 | 1 | 435 | 2.3e-233 | 817.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25353.t1 | MTR_8g062010 | 93.333 | 435 | 27 | 1 | 1 | 433 | 1 | 435 | 0.0 | 801 |
MS.gene25353.t1 | MTR_8g070950 | 64.155 | 438 | 141 | 8 | 3 | 432 | 9 | 438 | 8.17e-179 | 506 |
MS.gene25353.t1 | MTR_8g062080 | 58.036 | 448 | 159 | 9 | 1 | 432 | 15 | 449 | 2.58e-163 | 468 |
MS.gene25353.t1 | MTR_8g058965 | 57.363 | 455 | 156 | 9 | 9 | 432 | 13 | 460 | 2.73e-162 | 465 |
MS.gene25353.t1 | MTR_8g062310 | 57.991 | 438 | 158 | 8 | 1 | 432 | 15 | 432 | 1.48e-160 | 460 |
MS.gene25353.t1 | MTR_8g469020 | 55.361 | 457 | 163 | 9 | 9 | 432 | 7 | 455 | 4.63e-157 | 452 |
MS.gene25353.t1 | MTR_8g062300 | 55.603 | 464 | 158 | 10 | 9 | 432 | 26 | 481 | 4.96e-154 | 445 |
MS.gene25353.t1 | MTR_4g050250 | 52.670 | 412 | 151 | 11 | 2 | 374 | 14 | 420 | 1.38e-123 | 365 |
MS.gene25353.t1 | MTR_8g467790 | 50.132 | 379 | 141 | 9 | 9 | 372 | 148 | 493 | 9.42e-108 | 328 |
MS.gene25353.t1 | MTR_2g083840 | 43.612 | 454 | 220 | 12 | 3 | 428 | 12 | 457 | 2.76e-97 | 299 |
MS.gene25353.t1 | MTR_8g468810 | 42.198 | 455 | 218 | 20 | 6 | 428 | 22 | 463 | 3.48e-84 | 266 |
MS.gene25353.t1 | MTR_8g062270 | 39.693 | 456 | 224 | 17 | 7 | 427 | 14 | 453 | 1.44e-79 | 253 |
MS.gene25353.t1 | MTR_8g014260 | 40.848 | 448 | 227 | 18 | 8 | 428 | 15 | 451 | 1.53e-78 | 251 |
MS.gene25353.t1 | MTR_8g058970 | 40.129 | 466 | 226 | 16 | 9 | 428 | 19 | 477 | 1.17e-77 | 249 |
MS.gene25353.t1 | MTR_8g467800 | 39.597 | 447 | 230 | 10 | 9 | 428 | 20 | 453 | 1.75e-74 | 240 |
MS.gene25353.t1 | MTR_5g092960 | 39.121 | 455 | 233 | 14 | 7 | 427 | 17 | 461 | 3.06e-72 | 234 |
MS.gene25353.t1 | MTR_4g032730 | 37.908 | 459 | 238 | 13 | 9 | 427 | 15 | 466 | 3.64e-71 | 232 |
MS.gene25353.t1 | MTR_2g086020 | 77.622 | 143 | 32 | 0 | 290 | 432 | 177 | 319 | 3.43e-68 | 219 |
MS.gene25353.t1 | MTR_2g086020 | 49.333 | 150 | 59 | 5 | 35 | 175 | 1 | 142 | 4.87e-33 | 127 |
MS.gene25353.t1 | MTR_8g468760 | 36.324 | 457 | 222 | 14 | 1 | 427 | 1 | 418 | 2.98e-64 | 213 |
MS.gene25353.t1 | MTR_8g468840 | 38.255 | 447 | 237 | 13 | 8 | 426 | 13 | 448 | 5.06e-64 | 213 |
MS.gene25353.t1 | MTR_8g445780 | 39.356 | 404 | 203 | 16 | 2 | 381 | 5 | 390 | 3.92e-62 | 206 |
MS.gene25353.t1 | MTR_8g468810 | 41.598 | 363 | 169 | 18 | 6 | 338 | 22 | 371 | 3.51e-57 | 192 |
MS.gene25353.t1 | MTR_8g014160 | 35.778 | 450 | 208 | 19 | 1 | 428 | 35 | 425 | 1.27e-56 | 192 |
MS.gene25353.t1 | MTR_5g092960 | 38.950 | 362 | 184 | 11 | 7 | 338 | 17 | 371 | 6.67e-49 | 171 |
MS.gene25353.t1 | MTR_8g468810 | 43.103 | 290 | 130 | 14 | 6 | 272 | 22 | 299 | 1.98e-46 | 163 |
MS.gene25353.t1 | MTR_8g468810 | 43.103 | 290 | 130 | 14 | 6 | 272 | 22 | 299 | 2.95e-46 | 162 |
MS.gene25353.t1 | MTR_8g468810 | 43.103 | 290 | 130 | 14 | 6 | 272 | 22 | 299 | 5.71e-46 | 162 |
MS.gene25353.t1 | MTR_4g024710 | 38.487 | 304 | 155 | 12 | 145 | 428 | 56 | 347 | 4.15e-44 | 157 |
MS.gene25353.t1 | MTR_8g467800 | 40.925 | 281 | 142 | 7 | 9 | 272 | 20 | 293 | 4.15e-40 | 147 |
MS.gene25353.t1 | MTR_8g077460 | 50.376 | 133 | 63 | 3 | 296 | 428 | 246 | 375 | 4.20e-34 | 131 |
MS.gene25353.t1 | MTR_8g077460 | 40.969 | 227 | 111 | 11 | 1 | 211 | 1 | 220 | 1.56e-26 | 110 |
MS.gene25353.t1 | MTR_8g014210 | 39.831 | 236 | 123 | 9 | 205 | 428 | 3 | 231 | 8.27e-34 | 127 |
MS.gene25353.t1 | MTR_5g021550 | 46.980 | 149 | 73 | 4 | 5 | 148 | 15 | 162 | 8.35e-31 | 116 |
MS.gene25353.t1 | MTR_4g024745 | 36.029 | 272 | 148 | 11 | 154 | 407 | 17 | 280 | 2.45e-30 | 119 |
MS.gene25353.t1 | MTR_3g099800 | 63.218 | 87 | 31 | 1 | 340 | 425 | 19 | 105 | 5.57e-28 | 107 |
MS.gene25353.t1 | MTR_1g041245 | 28.764 | 445 | 223 | 21 | 9 | 428 | 11 | 386 | 1.02e-27 | 114 |
MS.gene25353.t1 | MTR_5g008950 | 27.880 | 434 | 228 | 17 | 11 | 428 | 1 | 365 | 1.02e-27 | 113 |
MS.gene25353.t1 | MTR_7g056433 | 27.816 | 435 | 244 | 16 | 8 | 428 | 11 | 389 | 3.99e-27 | 112 |
MS.gene25353.t1 | MTR_3g108150 | 28.276 | 435 | 239 | 18 | 7 | 427 | 11 | 386 | 4.29e-27 | 112 |
MS.gene25353.t1 | MTR_2g036470 | 27.394 | 449 | 243 | 21 | 2 | 427 | 7 | 395 | 2.96e-26 | 109 |
MS.gene25353.t1 | MTR_5g084070 | 27.189 | 434 | 287 | 12 | 1 | 420 | 1 | 419 | 8.97e-26 | 108 |
MS.gene25353.t1 | MTR_7g056287 | 27.252 | 433 | 237 | 16 | 9 | 427 | 3 | 371 | 1.25e-25 | 107 |
MS.gene25353.t1 | MTR_7g056277 | 27.483 | 433 | 236 | 16 | 9 | 427 | 259 | 627 | 3.52e-25 | 108 |
MS.gene25353.t1 | MTR_7g115270 | 26.437 | 435 | 257 | 18 | 8 | 425 | 11 | 399 | 1.67e-23 | 102 |
MS.gene25353.t1 | MTR_5g080710 | 26.869 | 428 | 283 | 13 | 9 | 420 | 33 | 446 | 1.47e-22 | 100 |
MS.gene25353.t1 | MTR_1g108820 | 29.812 | 426 | 240 | 18 | 9 | 425 | 8 | 383 | 5.46e-22 | 97.4 |
MS.gene25353.t1 | MTR_7g026500 | 26.879 | 439 | 243 | 18 | 9 | 427 | 14 | 394 | 6.46e-22 | 97.4 |
MS.gene25353.t1 | MTR_8g014290 | 42.308 | 156 | 76 | 6 | 5 | 148 | 6 | 159 | 6.93e-22 | 92.0 |
MS.gene25353.t1 | MTR_2g007450 | 27.966 | 472 | 238 | 22 | 1 | 425 | 1 | 417 | 1.14e-21 | 97.1 |
MS.gene25353.t1 | MTR_6g040270 | 27.714 | 433 | 231 | 19 | 11 | 425 | 10 | 378 | 1.21e-21 | 96.3 |
MS.gene25353.t1 | MTR_7g033915 | 27.400 | 427 | 229 | 18 | 9 | 427 | 11 | 364 | 1.50e-21 | 95.9 |
MS.gene25353.t1 | MTR_0543s0010 | 26.316 | 437 | 235 | 14 | 7 | 427 | 84 | 449 | 5.10e-21 | 95.1 |
MS.gene25353.t1 | MTR_7g098510 | 25.561 | 446 | 246 | 11 | 3 | 428 | 12 | 391 | 9.03e-21 | 94.0 |
MS.gene25353.t1 | MTR_2g008310 | 27.397 | 438 | 232 | 19 | 9 | 428 | 2 | 371 | 3.18e-20 | 92.4 |
MS.gene25353.t1 | MTR_3g087260 | 28.333 | 480 | 250 | 20 | 8 | 427 | 11 | 456 | 1.85e-19 | 90.5 |
MS.gene25353.t1 | MTR_7g098480 | 25.282 | 443 | 247 | 14 | 3 | 427 | 12 | 388 | 1.76e-18 | 87.8 |
MS.gene25353.t1 | MTR_0009s0080 | 25.686 | 401 | 229 | 16 | 11 | 395 | 20 | 367 | 3.13e-18 | 86.7 |
MS.gene25353.t1 | MTR_3g036250 | 24.480 | 433 | 237 | 13 | 9 | 425 | 5 | 363 | 3.93e-18 | 85.9 |
MS.gene25353.t1 | MTR_1g085120 | 25.740 | 439 | 248 | 17 | 9 | 428 | 92 | 471 | 4.13e-18 | 86.7 |
MS.gene25353.t1 | MTR_5g058000 | 26.512 | 430 | 242 | 18 | 9 | 427 | 8 | 374 | 7.83e-18 | 85.1 |
MS.gene25353.t1 | MTR_7g098570 | 25.571 | 438 | 236 | 16 | 9 | 424 | 20 | 389 | 8.63e-18 | 85.9 |
MS.gene25353.t1 | MTR_1g085120 | 26.977 | 430 | 254 | 16 | 9 | 428 | 167 | 546 | 1.02e-17 | 85.9 |
MS.gene25353.t1 | MTR_3g108560 | 25.858 | 437 | 240 | 17 | 8 | 427 | 19 | 388 | 1.39e-17 | 84.3 |
MS.gene25353.t1 | MTR_4g080787 | 24.733 | 469 | 291 | 15 | 3 | 427 | 13 | 463 | 2.73e-17 | 84.3 |
MS.gene25353.t1 | MTR_8g085430 | 32.995 | 197 | 113 | 8 | 9 | 193 | 11 | 200 | 2.91e-17 | 82.8 |
MS.gene25353.t1 | MTR_3g107120 | 27.430 | 463 | 244 | 23 | 1 | 433 | 1 | 401 | 2.99e-17 | 83.6 |
MS.gene25353.t1 | MTR_0492s0020 | 25.845 | 414 | 216 | 15 | 7 | 400 | 84 | 426 | 5.84e-17 | 82.8 |
MS.gene25353.t1 | MTR_3g023630 | 33.005 | 203 | 116 | 8 | 6 | 199 | 5 | 196 | 7.08e-17 | 82.0 |
MS.gene25353.t1 | MTR_7g032380 | 33.854 | 192 | 109 | 8 | 9 | 192 | 11 | 192 | 1.11e-16 | 81.3 |
MS.gene25353.t1 | MTR_7g032380 | 29.775 | 178 | 103 | 6 | 266 | 428 | 186 | 356 | 1.03e-12 | 69.3 |
MS.gene25353.t1 | MTR_3g107160 | 26.879 | 439 | 246 | 17 | 6 | 428 | 4 | 383 | 1.13e-16 | 81.6 |
MS.gene25353.t1 | MTR_4g056030 | 28.673 | 422 | 257 | 16 | 9 | 400 | 9 | 416 | 1.79e-16 | 81.6 |
MS.gene25353.t1 | MTR_7g056447 | 33.498 | 203 | 105 | 10 | 1 | 190 | 1 | 186 | 3.79e-16 | 79.0 |
MS.gene25353.t1 | MTR_4g056020 | 35.294 | 204 | 108 | 8 | 1 | 191 | 1 | 193 | 7.55e-16 | 79.7 |
MS.gene25353.t1 | MTR_8g014230 | 42.857 | 84 | 46 | 2 | 338 | 421 | 17 | 98 | 2.01e-15 | 72.4 |
MS.gene25353.t1 | MTR_6g022360 | 24.537 | 432 | 246 | 14 | 9 | 427 | 43 | 407 | 2.19e-15 | 78.2 |
MS.gene25353.t1 | MTR_5g083890 | 24.829 | 439 | 240 | 19 | 8 | 410 | 5 | 389 | 3.06e-15 | 78.2 |
MS.gene25353.t1 | MTR_4g024720 | 34.731 | 167 | 85 | 5 | 5 | 149 | 13 | 177 | 3.51e-15 | 74.7 |
MS.gene25353.t1 | MTR_1g115245 | 35.185 | 162 | 88 | 7 | 3 | 156 | 18 | 170 | 2.75e-14 | 73.6 |
MS.gene25353.t1 | MTR_1g066830 | 25.761 | 427 | 261 | 18 | 9 | 427 | 8 | 386 | 3.18e-14 | 74.3 |
MS.gene25353.t1 | MTR_4g056040 | 26.789 | 489 | 218 | 20 | 1 | 396 | 1 | 442 | 5.32e-14 | 74.3 |
MS.gene25353.t1 | MTR_4g080773 | 24.229 | 454 | 288 | 16 | 3 | 416 | 13 | 450 | 5.83e-14 | 73.9 |
MS.gene25353.t1 | MTR_3g107100 | 31.034 | 203 | 126 | 7 | 9 | 204 | 11 | 206 | 5.99e-14 | 73.6 |
MS.gene25353.t1 | MTR_4g080773 | 24.229 | 454 | 288 | 16 | 3 | 416 | 13 | 450 | 6.58e-14 | 73.9 |
MS.gene25353.t1 | MTR_5g045510 | 23.810 | 399 | 221 | 16 | 9 | 395 | 12 | 339 | 2.52e-13 | 71.6 |
MS.gene25353.t1 | MTR_2g007500 | 33.171 | 205 | 102 | 9 | 1 | 193 | 6 | 187 | 2.60e-13 | 71.2 |
MS.gene25353.t1 | MTR_1089s0010 | 33.813 | 139 | 80 | 5 | 297 | 428 | 246 | 379 | 2.70e-13 | 71.2 |
MS.gene25353.t1 | MTR_7g032370 | 32.778 | 180 | 104 | 8 | 20 | 192 | 1 | 170 | 4.15e-13 | 70.5 |
MS.gene25353.t1 | MTR_7g032370 | 32.847 | 137 | 84 | 3 | 299 | 428 | 217 | 352 | 2.40e-12 | 68.2 |
MS.gene25353.t1 | MTR_1g038710 | 25.602 | 457 | 264 | 15 | 9 | 416 | 19 | 448 | 1.61e-12 | 69.3 |
MS.gene25353.t1 | MTR_2g047858 | 33.158 | 190 | 116 | 8 | 9 | 191 | 115 | 300 | 2.00e-12 | 69.3 |
MS.gene25353.t1 | MTR_4g081030 | 26.062 | 353 | 180 | 13 | 7 | 322 | 15 | 323 | 3.50e-12 | 68.2 |
MS.gene25353.t1 | MTR_5g008920 | 31.188 | 202 | 119 | 9 | 1 | 193 | 1 | 191 | 3.57e-12 | 68.2 |
MS.gene25353.t1 | MTR_5g073420 | 34.021 | 194 | 108 | 11 | 9 | 191 | 11 | 195 | 5.49e-12 | 67.4 |
MS.gene25353.t1 | MTR_7g088260 | 31.500 | 200 | 104 | 10 | 6 | 191 | 88 | 268 | 5.69e-12 | 67.8 |
MS.gene25353.t1 | MTR_7g056430 | 30.208 | 192 | 102 | 8 | 1 | 191 | 1 | 161 | 7.79e-12 | 68.2 |
MS.gene25353.t1 | MTR_2g005990 | 32.512 | 203 | 109 | 11 | 9 | 191 | 6 | 200 | 8.25e-12 | 67.0 |
MS.gene25353.t1 | MTR_7g056420 | 30.208 | 192 | 102 | 8 | 1 | 191 | 1 | 161 | 9.09e-12 | 67.8 |
MS.gene25353.t1 | MTR_5g012840 | 29.843 | 191 | 104 | 7 | 243 | 428 | 153 | 318 | 1.10e-11 | 65.9 |
MS.gene25353.t1 | MTR_5g039950 | 25.432 | 405 | 246 | 13 | 8 | 395 | 22 | 387 | 1.84e-11 | 65.9 |
MS.gene25353.t1 | MTR_4g024770 | 50.000 | 60 | 26 | 2 | 3 | 59 | 15 | 73 | 2.74e-11 | 59.7 |
MS.gene25353.t1 | MTR_3g040700 | 27.670 | 206 | 122 | 8 | 9 | 201 | 43 | 234 | 3.21e-11 | 65.5 |
MS.gene25353.t1 | MTR_3g467400 | 28.708 | 209 | 116 | 9 | 9 | 194 | 3 | 201 | 3.32e-11 | 65.1 |
MS.gene25353.t1 | MTR_5g054920 | 29.358 | 109 | 75 | 1 | 291 | 397 | 71 | 179 | 3.34e-11 | 62.8 |
MS.gene25353.t1 | MTR_7g055943 | 31.313 | 198 | 115 | 10 | 4 | 191 | 35 | 221 | 3.41e-11 | 65.1 |
MS.gene25353.t1 | MTR_3g110010 | 34.715 | 193 | 106 | 11 | 8 | 193 | 12 | 191 | 4.88e-11 | 65.5 |
MS.gene25353.t1 | MTR_3g109982 | 34.715 | 193 | 106 | 11 | 8 | 193 | 12 | 191 | 5.24e-11 | 65.1 |
MS.gene25353.t1 | MTR_2g047872 | 32.323 | 198 | 116 | 10 | 9 | 194 | 23 | 214 | 6.83e-11 | 64.3 |
MS.gene25353.t1 | MTR_2g091145 | 25.553 | 407 | 264 | 17 | 9 | 395 | 21 | 408 | 8.46e-11 | 63.9 |
MS.gene25353.t1 | MTR_7g034115 | 34.375 | 192 | 106 | 10 | 9 | 191 | 11 | 191 | 8.79e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25353.t1 | AT5G56420 | 27.778 | 450 | 268 | 20 | 6 | 428 | 3 | 422 | 9.25e-24 | 103 |
MS.gene25353.t1 | AT5G56420 | 27.778 | 450 | 268 | 20 | 6 | 428 | 3 | 422 | 9.25e-24 | 103 |
MS.gene25353.t1 | AT5G56420 | 27.778 | 450 | 268 | 20 | 6 | 428 | 3 | 422 | 9.25e-24 | 103 |
MS.gene25353.t1 | AT4G10400 | 26.757 | 441 | 267 | 15 | 9 | 427 | 2 | 408 | 1.78e-22 | 99.4 |
MS.gene25353.t1 | AT4G10400 | 26.757 | 441 | 267 | 15 | 9 | 427 | 2 | 408 | 1.78e-22 | 99.4 |
MS.gene25353.t1 | AT4G10400 | 26.757 | 441 | 267 | 15 | 9 | 427 | 2 | 408 | 1.78e-22 | 99.4 |
MS.gene25353.t1 | AT4G26340 | 28.731 | 449 | 260 | 22 | 9 | 428 | 2 | 419 | 4.16e-21 | 95.5 |
MS.gene25353.t1 | AT3G50710 | 26.813 | 455 | 269 | 21 | 9 | 428 | 2 | 427 | 7.97e-20 | 91.7 |
MS.gene25353.t1 | AT5G56820 | 28.348 | 448 | 257 | 20 | 6 | 425 | 12 | 423 | 9.48e-20 | 91.3 |
MS.gene25353.t1 | AT4G13965 | 26.696 | 457 | 263 | 19 | 2 | 425 | 3 | 420 | 1.37e-19 | 90.9 |
MS.gene25353.t1 | AT5G56560 | 26.517 | 445 | 269 | 21 | 10 | 428 | 6 | 418 | 1.45e-19 | 90.9 |
MS.gene25353.t1 | AT1G78750 | 25.328 | 458 | 295 | 17 | 2 | 425 | 11 | 455 | 3.99e-18 | 86.7 |
MS.gene25353.t1 | AT1G78750 | 25.328 | 458 | 295 | 17 | 2 | 425 | 11 | 455 | 3.99e-18 | 86.7 |
MS.gene25353.t1 | AT5G56400 | 26.233 | 446 | 290 | 15 | 4 | 428 | 28 | 455 | 4.76e-18 | 86.7 |
MS.gene25353.t1 | AT2G26030 | 24.464 | 466 | 277 | 19 | 9 | 425 | 4 | 443 | 6.67e-18 | 85.9 |
MS.gene25353.t1 | AT5G56440 | 26.432 | 454 | 273 | 19 | 9 | 427 | 2 | 429 | 7.97e-18 | 85.5 |
MS.gene25353.t1 | AT3G52680 | 28.540 | 452 | 274 | 17 | 7 | 430 | 19 | 449 | 1.11e-17 | 85.5 |
MS.gene25353.t1 | AT3G59200 | 36.000 | 200 | 100 | 10 | 8 | 191 | 6 | 193 | 2.70e-17 | 83.6 |
MS.gene25353.t1 | AT3G59200 | 35.678 | 199 | 104 | 10 | 7 | 191 | 5 | 193 | 4.23e-17 | 84.0 |
MS.gene25353.t1 | AT3G42770 | 26.316 | 437 | 275 | 16 | 11 | 420 | 1 | 417 | 6.35e-17 | 83.2 |
MS.gene25353.t1 | AT2G26030 | 24.678 | 466 | 271 | 19 | 9 | 425 | 4 | 438 | 7.58e-17 | 82.8 |
MS.gene25353.t1 | AT2G26030 | 24.678 | 466 | 271 | 19 | 9 | 425 | 4 | 438 | 7.58e-17 | 82.8 |
MS.gene25353.t1 | AT5G50270 | 27.400 | 427 | 259 | 19 | 9 | 407 | 2 | 405 | 7.62e-17 | 82.4 |
MS.gene25353.t1 | AT1G78760 | 25.420 | 476 | 264 | 23 | 4 | 429 | 11 | 445 | 1.78e-16 | 81.6 |
MS.gene25353.t1 | AT2G04230 | 27.896 | 423 | 238 | 22 | 7 | 391 | 11 | 404 | 2.45e-16 | 81.3 |
MS.gene25353.t1 | AT4G00160 | 27.826 | 460 | 265 | 21 | 7 | 428 | 14 | 444 | 2.45e-16 | 81.3 |
MS.gene25353.t1 | AT5G22660 | 26.471 | 476 | 260 | 22 | 2 | 425 | 6 | 443 | 3.81e-16 | 80.5 |
MS.gene25353.t1 | AT5G56370 | 26.174 | 447 | 274 | 15 | 9 | 427 | 2 | 420 | 7.59e-16 | 79.7 |
MS.gene25353.t1 | AT5G56370 | 26.174 | 447 | 274 | 15 | 9 | 427 | 2 | 420 | 7.59e-16 | 79.7 |
MS.gene25353.t1 | AT4G26350 | 26.201 | 458 | 269 | 22 | 9 | 428 | 2 | 428 | 1.14e-15 | 79.0 |
MS.gene25353.t1 | AT3G60040 | 26.077 | 441 | 268 | 19 | 8 | 412 | 12 | 430 | 1.28e-15 | 79.7 |
MS.gene25353.t1 | AT5G22610 | 23.991 | 446 | 284 | 15 | 8 | 426 | 17 | 434 | 1.78e-15 | 78.6 |
MS.gene25353.t1 | AT5G53635 | 26.503 | 449 | 273 | 15 | 11 | 427 | 2 | 425 | 2.79e-15 | 77.8 |
MS.gene25353.t1 | AT3G60040 | 25.734 | 443 | 267 | 18 | 8 | 412 | 231 | 649 | 2.81e-15 | 78.6 |
MS.gene25353.t1 | AT1G66290 | 26.049 | 453 | 268 | 22 | 9 | 425 | 29 | 450 | 2.87e-15 | 77.8 |
MS.gene25353.t1 | AT3G60040 | 25.734 | 443 | 267 | 18 | 8 | 412 | 229 | 647 | 3.32e-15 | 78.2 |
MS.gene25353.t1 | AT3G60040 | 25.734 | 443 | 267 | 18 | 8 | 412 | 232 | 650 | 3.32e-15 | 78.6 |
MS.gene25353.t1 | AT3G60040 | 25.734 | 443 | 267 | 18 | 8 | 412 | 231 | 649 | 3.38e-15 | 78.6 |
MS.gene25353.t1 | AT3G59230 | 31.500 | 200 | 116 | 5 | 8 | 191 | 11 | 205 | 6.66e-15 | 77.0 |
MS.gene25353.t1 | AT4G14103 | 31.472 | 197 | 115 | 6 | 6 | 191 | 5 | 192 | 1.60e-14 | 75.1 |
MS.gene25353.t1 | AT4G14103 | 31.472 | 197 | 115 | 6 | 6 | 191 | 5 | 192 | 1.60e-14 | 75.1 |
MS.gene25353.t1 | AT1G66310 | 27.876 | 452 | 260 | 23 | 9 | 425 | 19 | 439 | 1.86e-14 | 75.5 |
MS.gene25353.t1 | AT4G14103 | 31.472 | 197 | 115 | 6 | 6 | 191 | 5 | 192 | 1.92e-14 | 75.5 |
MS.gene25353.t1 | AT1G32375 | 32.407 | 216 | 120 | 10 | 9 | 212 | 2 | 203 | 3.42e-14 | 74.3 |
MS.gene25353.t1 | AT1G32375 | 32.407 | 216 | 120 | 10 | 9 | 212 | 2 | 203 | 3.42e-14 | 74.3 |
MS.gene25353.t1 | AT5G22720 | 23.690 | 477 | 279 | 18 | 5 | 427 | 19 | 464 | 5.43e-14 | 73.9 |
MS.gene25353.t1 | AT3G49030 | 26.490 | 453 | 278 | 20 | 3 | 427 | 15 | 440 | 6.46e-14 | 73.9 |
MS.gene25353.t1 | AT4G09920 | 29.843 | 191 | 116 | 7 | 9 | 191 | 2 | 182 | 7.03e-14 | 72.8 |
MS.gene25353.t1 | AT4G09920 | 29.843 | 191 | 116 | 7 | 9 | 191 | 2 | 182 | 7.03e-14 | 72.8 |
MS.gene25353.t1 | AT4G09920 | 29.534 | 193 | 114 | 7 | 9 | 191 | 2 | 182 | 7.91e-14 | 72.0 |
MS.gene25353.t1 | AT4G09920 | 29.534 | 193 | 114 | 7 | 9 | 191 | 2 | 182 | 7.91e-14 | 72.0 |
MS.gene25353.t1 | AT4G09920 | 29.534 | 193 | 114 | 7 | 9 | 191 | 2 | 182 | 7.91e-14 | 72.0 |
MS.gene25353.t1 | AT3G26930 | 29.258 | 458 | 257 | 22 | 6 | 428 | 18 | 443 | 8.15e-14 | 73.6 |
MS.gene25353.t1 | AT2G26860 | 26.139 | 417 | 250 | 15 | 9 | 392 | 2 | 393 | 2.17e-13 | 72.0 |
MS.gene25353.t1 | AT2G26860 | 26.139 | 417 | 250 | 15 | 9 | 392 | 2 | 393 | 2.17e-13 | 72.0 |
MS.gene25353.t1 | AT1G16930 | 25.257 | 487 | 261 | 24 | 1 | 428 | 7 | 449 | 2.42e-13 | 72.0 |
MS.gene25353.t1 | AT1G16930 | 25.257 | 487 | 261 | 24 | 1 | 428 | 7 | 449 | 2.42e-13 | 72.0 |
MS.gene25353.t1 | AT1G16930 | 25.257 | 487 | 261 | 24 | 1 | 428 | 7 | 449 | 2.42e-13 | 72.0 |
MS.gene25353.t1 | AT5G53640 | 31.507 | 219 | 99 | 10 | 1 | 191 | 1 | 196 | 3.94e-13 | 68.9 |
MS.gene25353.t1 | AT5G38590 | 24.201 | 438 | 261 | 18 | 9 | 413 | 2 | 401 | 4.36e-13 | 70.9 |
MS.gene25353.t1 | AT3G49030 | 26.000 | 450 | 258 | 21 | 3 | 427 | 15 | 414 | 4.90e-13 | 70.9 |
MS.gene25353.t1 | AT3G51530 | 25.882 | 425 | 257 | 17 | 4 | 398 | 22 | 418 | 8.01e-13 | 70.5 |
MS.gene25353.t1 | AT3G52680 | 33.668 | 199 | 108 | 7 | 7 | 194 | 19 | 204 | 1.37e-12 | 69.3 |
MS.gene25353.t1 | AT5G60610 | 26.150 | 413 | 245 | 18 | 9 | 392 | 2 | 383 | 1.50e-12 | 69.3 |
MS.gene25353.t1 | AT5G60610 | 26.150 | 413 | 245 | 18 | 9 | 392 | 2 | 383 | 1.50e-12 | 69.3 |
MS.gene25353.t1 | AT4G13985 | 24.895 | 478 | 258 | 20 | 9 | 425 | 19 | 456 | 1.94e-12 | 69.3 |
MS.gene25353.t1 | AT4G14096 | 30.729 | 192 | 117 | 7 | 8 | 191 | 7 | 190 | 7.90e-12 | 67.4 |
MS.gene25353.t1 | AT4G14096 | 30.729 | 192 | 117 | 7 | 8 | 191 | 7 | 190 | 7.90e-12 | 67.4 |
MS.gene25353.t1 | AT3G59190 | 32.039 | 206 | 114 | 11 | 3 | 191 | 5 | 201 | 8.70e-12 | 67.0 |
MS.gene25353.t1 | AT3G59190 | 32.039 | 206 | 114 | 11 | 3 | 191 | 5 | 201 | 1.05e-11 | 67.0 |
MS.gene25353.t1 | AT5G41630 | 32.536 | 209 | 116 | 11 | 1 | 191 | 4 | 205 | 1.55e-11 | 66.2 |
MS.gene25353.t1 | AT1G06630 | 25.278 | 360 | 219 | 14 | 8 | 335 | 11 | 352 | 2.30e-11 | 65.9 |
MS.gene25353.t1 | AT1G06630 | 25.278 | 360 | 219 | 14 | 8 | 335 | 11 | 352 | 2.30e-11 | 65.9 |
MS.gene25353.t1 | AT1G06630 | 25.278 | 360 | 219 | 14 | 8 | 335 | 11 | 352 | 2.30e-11 | 65.9 |
MS.gene25353.t1 | AT1G06630 | 25.278 | 360 | 219 | 14 | 8 | 335 | 11 | 352 | 2.30e-11 | 65.9 |
MS.gene25353.t1 | AT1G06630 | 25.278 | 360 | 219 | 14 | 8 | 335 | 11 | 352 | 2.46e-11 | 65.5 |
MS.gene25353.t1 | AT1G06630 | 25.278 | 360 | 219 | 14 | 8 | 335 | 11 | 352 | 2.46e-11 | 65.5 |
MS.gene25353.t1 | AT3G26922 | 33.166 | 199 | 105 | 9 | 8 | 194 | 13 | 195 | 2.62e-11 | 64.7 |
MS.gene25353.t1 | AT3G26922 | 33.166 | 199 | 105 | 9 | 8 | 194 | 13 | 195 | 2.62e-11 | 64.7 |
MS.gene25353.t1 | AT1G06630 | 25.278 | 360 | 219 | 14 | 8 | 335 | 20 | 361 | 3.46e-11 | 65.1 |
MS.gene25353.t1 | AT3G59170 | 30.909 | 220 | 116 | 9 | 7 | 193 | 5 | 221 | 3.68e-11 | 65.5 |
MS.gene25353.t1 | AT3G58940 | 31.868 | 182 | 97 | 8 | 9 | 171 | 2 | 175 | 4.20e-11 | 65.5 |
MS.gene25353.t1 | AT3G58940 | 31.868 | 182 | 97 | 8 | 9 | 171 | 2 | 175 | 4.20e-11 | 65.5 |
MS.gene25353.t1 | AT1G06630 | 28.205 | 195 | 126 | 5 | 8 | 191 | 11 | 202 | 4.23e-11 | 64.3 |
MS.gene25353.t1 | AT1G06630 | 25.278 | 360 | 219 | 14 | 8 | 335 | 11 | 352 | 4.72e-11 | 65.1 |
MS.gene25353.t1 | AT1G58310 | 29.954 | 217 | 109 | 8 | 7 | 192 | 6 | 210 | 5.48e-11 | 64.7 |
MS.gene25353.t1 | AT1G66320 | 25.490 | 459 | 256 | 22 | 14 | 425 | 35 | 454 | 7.10e-11 | 64.3 |
Find 106 sgRNAs with CRISPR-Local
Find 123 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GACCCAGCCGTCTCTCTTTA+AGG | 0.096468 | 8.2:+39049769 | MS.gene25353:CDS |
TCCGGCTGCCATGTTCTTAA+AGG | 0.277720 | 8.2:-39049514 | None:intergenic |
TGATATTTCCAGTTACATTA+AGG | 0.290409 | 8.2:-39048964 | None:intergenic |
CATTGGCCATTTCCACAGTA+TGG | 0.333347 | 8.2:+39048997 | MS.gene25353:CDS |
TCGACAAATTCGCTTTCAAC+TGG | 0.344429 | 8.2:-39049046 | None:intergenic |
TGTAACTGGAAATATCAAAT+TGG | 0.358240 | 8.2:+39048970 | MS.gene25353:CDS |
AGAAGTTTGGTGACATAGTC+TGG | 0.364604 | 8.2:-39048872 | None:intergenic |
CAGGACATTCGAGTTGAAAC+AGG | 0.370609 | 8.2:-39049300 | None:intergenic |
CTCGGAGGTGTTTGAGAATA+GGG | 0.373089 | 8.2:-39049069 | None:intergenic |
ACTCTCTGGCTGCCCCGGTC+TGG | 0.378377 | 8.2:+39048817 | MS.gene25353:CDS |
CTCGCCGGTGGCGTTATCTC+TGG | 0.383892 | 8.2:+39048292 | MS.gene25353:CDS |
CTGTGGATCCTTGCTGCCAC+TGG | 0.389738 | 8.2:+39048504 | MS.gene25353:CDS |
TTCGTGTCATTCAACATCTA+AGG | 0.391135 | 8.2:+39049117 | MS.gene25353:CDS |
ACCGGGGCAGCCAGAGAGTA+AGG | 0.393311 | 8.2:-39048813 | None:intergenic |
TGGAGTTACCTTAATGTAAC+TGG | 0.395592 | 8.2:+39048956 | MS.gene25353:CDS |
AGGTGGGATTTGAGACATTC+AGG | 0.399944 | 8.2:-39049550 | None:intergenic |
TTTGAATGTCGCGGGATTTG+CGG | 0.402806 | 8.2:-39048422 | None:intergenic |
CTTCCACCATACTGTGGAAA+TGG | 0.406312 | 8.2:-39049003 | None:intergenic |
TCAGAAGTTGCCTTACTCTC+TGG | 0.409070 | 8.2:+39048803 | MS.gene25353:CDS |
ACTATGGCACGACGGAAATC+AGG | 0.413973 | 8.2:+39048174 | None:intergenic |
GCCTTACTCTCTGGCTGCCC+CGG | 0.418848 | 8.2:+39048812 | MS.gene25353:CDS |
GCACAAATCTTGTTTCTCTC+AGG | 0.423152 | 8.2:+39048601 | MS.gene25353:CDS |
ATATCCTTCTATGTGAATAT+AGG | 0.424387 | 8.2:-39049575 | None:intergenic |
AATATCAAATTGGCCATCAT+TGG | 0.425497 | 8.2:+39048980 | MS.gene25353:CDS |
GGATTTCGATCTCTTGGAGC+TGG | 0.432007 | 8.2:-39048909 | None:intergenic |
CTGACCTATATTCACATAGA+AGG | 0.433553 | 8.2:+39049571 | MS.gene25353:CDS |
TCTCGGAGGTGTTTGAGAAT+AGG | 0.436391 | 8.2:-39049070 | None:intergenic |
CGTCGGAGAAGTTGAAGACT+TGG | 0.448814 | 8.2:-39048323 | None:intergenic |
AGTGGTGGATTTCGATCTCT+TGG | 0.460719 | 8.2:-39048915 | None:intergenic |
TCATATACTCTTTGCGATCT+CGG | 0.462793 | 8.2:-39049087 | None:intergenic |
ATATGCAACAGGAGTGAGTC+TGG | 0.464210 | 8.2:-39048219 | None:intergenic |
CTGCCCCGGTCTGGAAACTT+TGG | 0.467080 | 8.2:+39048826 | MS.gene25353:CDS |
ATATATAATCTCTTCAATGA+TGG | 0.467974 | 8.2:-39048761 | None:intergenic |
TGGGTCAAATTTAAGTTGGC+AGG | 0.480559 | 8.2:-39049752 | None:intergenic |
GGAAGGTGGAATGAGAAGTT+TGG | 0.482287 | 8.2:-39048885 | None:intergenic |
TGAAGTAAATTGCGAAACTC+TGG | 0.482988 | 8.2:-39049260 | None:intergenic |
GGAAGGACATGATATGCAAC+AGG | 0.493505 | 8.2:-39048230 | None:intergenic |
CGGCTGGGTCAAATTTAAGT+TGG | 0.494896 | 8.2:-39049756 | None:intergenic |
CTCACTATCACCAACCCATT+CGG | 0.495214 | 8.2:+39048453 | MS.gene25353:CDS |
CTTCTATGTGAATATAGGTC+AGG | 0.500493 | 8.2:-39049570 | None:intergenic |
CGACAAATTCGCTTTCAACT+GGG | 0.505565 | 8.2:-39049045 | None:intergenic |
TCTCATAATTCAAAGCAAGA+AGG | 0.505625 | 8.2:+39049358 | MS.gene25353:CDS |
GATCTCTTGGAGCTGGAGGA+AGG | 0.507584 | 8.2:-39048902 | None:intergenic |
GAAAGGAGGGAGGGTTATTG+CGG | 0.510199 | 8.2:-39048565 | None:intergenic |
CGGTGAGAGAGAGTTCTTGA+AGG | 0.511886 | 8.2:-39048533 | None:intergenic |
GGTTATTGCGGAGTCCTTGA+CGG | 0.512266 | 8.2:-39048553 | None:intergenic |
ATTCACATAGAAGGATATCA+AGG | 0.515119 | 8.2:+39049580 | MS.gene25353:CDS |
TTCTTGAAGGTGAGGGCCAG+TGG | 0.517112 | 8.2:-39048520 | None:intergenic |
CTGACAATTTCACCTGGAGC+TGG | 0.518959 | 8.2:+39048936 | MS.gene25353:CDS |
CTGTTTCAACTCGAATGTCC+TGG | 0.520806 | 8.2:+39049301 | MS.gene25353:CDS |
CCATCCAAAGTTTCCAGACC+GGG | 0.523685 | 8.2:-39048830 | None:intergenic |
GACGAGAGTCATCGTAGCTA+CGG | 0.525998 | 8.2:-39048268 | None:intergenic |
GAATGTCGCGGGATTTGCGG+AGG | 0.534092 | 8.2:-39048419 | None:intergenic |
GTAGAAACATGCCACCGAAT+GGG | 0.534153 | 8.2:-39048467 | None:intergenic |
GTAGCTACGGAGGTTCTAGT+AGG | 0.538342 | 8.2:-39048255 | None:intergenic |
ACCATCCAAAGTTTCCAGAC+CGG | 0.539301 | 8.2:-39048831 | None:intergenic |
CACCTTAAAGAGAGACGGCT+GGG | 0.541106 | 8.2:-39049771 | None:intergenic |
AGAGAGAGTTCTTGAAGGTG+AGG | 0.541451 | 8.2:-39048528 | None:intergenic |
CGATGACTCTCGTCTCTCGC+CGG | 0.542962 | 8.2:+39048277 | MS.gene25353:CDS |
CCCGGTCTGGAAACTTTGGA+TGG | 0.544555 | 8.2:+39048830 | MS.gene25353:CDS |
ACCTTTAAGAACATGGCAGC+CGG | 0.545276 | 8.2:+39049513 | MS.gene25353:CDS |
TCAGGAACCGTTGTTGACTC+CGG | 0.545420 | 8.2:-39049532 | None:intergenic |
ATTTCTCAAGCACGTTGACC+AGG | 0.546076 | 8.2:-39049319 | None:intergenic |
GACAAATTCGCTTTCAACTG+GGG | 0.549522 | 8.2:-39049044 | None:intergenic |
TGTAGAAACATGCCACCGAA+TGG | 0.565747 | 8.2:-39048468 | None:intergenic |
TTTCGATCTCTTGGAGCTGG+AGG | 0.565969 | 8.2:-39048906 | None:intergenic |
TCACCTTAAAGAGAGACGGC+TGG | 0.570926 | 8.2:-39049772 | None:intergenic |
CCACCACTGACAATTTCACC+TGG | 0.571233 | 8.2:+39048930 | MS.gene25353:CDS |
CTACGGAGGTTCTAGTAGGA+AGG | 0.576017 | 8.2:-39048251 | None:intergenic |
CTATGTGAATATAGGTCAGG+TGG | 0.580589 | 8.2:-39049567 | None:intergenic |
CCAGGTGAAATTGTCAGTGG+TGG | 0.585148 | 8.2:-39048930 | None:intergenic |
AAGATTAACTGATATACCAA+GGG | 0.586408 | 8.2:+39049720 | MS.gene25353:CDS |
ATTAAGGTAACTCCAGCTCC+AGG | 0.586794 | 8.2:-39048948 | None:intergenic |
GAGAGAGTTCTTGAAGGTGA+GGG | 0.588776 | 8.2:-39048527 | None:intergenic |
CCGGTGGCGTTATCTCTGGA+AGG | 0.590496 | 8.2:+39048296 | MS.gene25353:CDS |
TGGCCATTTCCACAGTATGG+TGG | 0.597988 | 8.2:+39049000 | MS.gene25353:CDS |
TACACGACTGTGTTCAACTG+TGG | 0.605228 | 8.2:+39048487 | MS.gene25353:CDS |
AACTATCACCTTTAAGAACA+TGG | 0.605685 | 8.2:+39049506 | MS.gene25353:CDS |
TTTGTAACATAGCGACTCGT+CGG | 0.610095 | 8.2:-39048340 | None:intergenic |
ACTGTGGAAATGGCCAATGA+TGG | 0.610943 | 8.2:-39048993 | None:intergenic |
TGGCAGGTGACAGAGCCCCT+TGG | 0.611510 | 8.2:-39049736 | None:intergenic |
AAAGATTAACTGATATACCA+AGG | 0.612225 | 8.2:+39049719 | MS.gene25353:CDS |
TTTAGAACAGTGGCATGAAG+TGG | 0.614365 | 8.2:-39049233 | None:intergenic |
CTCTTGGAGCTGGAGGAAGG+TGG | 0.615652 | 8.2:-39048899 | None:intergenic |
GGTGAGGGCCAGTGGCAGCA+AGG | 0.616020 | 8.2:-39048512 | None:intergenic |
TGACTCTCGTCTCTCGCCGG+TGG | 0.621406 | 8.2:+39048280 | MS.gene25353:CDS |
AATGTCGCGGGATTTGCGGA+GGG | 0.621780 | 8.2:-39048418 | None:intergenic |
AGAACTCTCTCTCACCGTCA+AGG | 0.624267 | 8.2:+39048539 | MS.gene25353:CDS |
GGAGGTTCTAGTAGGAAGGA+AGG | 0.628714 | 8.2:-39048247 | None:intergenic |
AAACATGCCACCGAATGGGT+TGG | 0.634674 | 8.2:-39048463 | None:intergenic |
ACTATCACCAACCCATTCGG+TGG | 0.634952 | 8.2:+39048456 | MS.gene25353:CDS |
GTTTGGTGACATAGTCTGGA+GGG | 0.638914 | 8.2:-39048868 | None:intergenic |
TATGTGAATATAGGTCAGGT+GGG | 0.640734 | 8.2:-39049566 | None:intergenic |
CTCTGGATAGTTTAGAACAG+TGG | 0.647378 | 8.2:-39049243 | None:intergenic |
CCTTCCAGAGATAACGCCAC+CGG | 0.649705 | 8.2:-39048296 | None:intergenic |
GAAATGCTTCCACCATACTG+TGG | 0.660794 | 8.2:-39049009 | None:intergenic |
AAGAGATTATATATCGACGT+AGG | 0.665926 | 8.2:+39048770 | MS.gene25353:CDS |
AGGACATTCGAGTTGAAACA+GGG | 0.672325 | 8.2:-39049299 | None:intergenic |
GCTCCAGGTGAAATTGTCAG+TGG | 0.674603 | 8.2:-39048933 | None:intergenic |
TATACTCTTTGCGATCTCGG+AGG | 0.680932 | 8.2:-39049084 | None:intergenic |
AGTTTGGTGACATAGTCTGG+AGG | 0.688870 | 8.2:-39048869 | None:intergenic |
TTATGAGAACTTGAAGCATG+TGG | 0.695487 | 8.2:-39049343 | None:intergenic |
CATCCAAAGTTTCCAGACCG+GGG | 0.699918 | 8.2:-39048829 | None:intergenic |
ATGGCAGCCGGAGTCAACAA+CGG | 0.700697 | 8.2:+39049525 | MS.gene25353:CDS |
GAGAGTCATCGTAGCTACGG+AGG | 0.707835 | 8.2:-39048265 | None:intergenic |
AGATTAACTGATATACCAAG+GGG | 0.725053 | 8.2:+39049721 | MS.gene25353:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AGTTTAATTAAATCAATTTT+TGG | + | chr8.2:39049396-39049415 | MS.gene25353:intron | 10.0% |
!!! | ACACAAAAATATATTTTTGA+GGG | + | chr8.2:39049456-39049475 | MS.gene25353:intron | 15.0% |
!!! | AGATATTACAATTTTCTTTT+TGG | - | chr8.2:39048637-39048656 | None:intergenic | 15.0% |
!!! | TACACAAAAATATATTTTTG+AGG | + | chr8.2:39049455-39049474 | MS.gene25353:intron | 15.0% |
!! | AATTGATTAAAAAGAAAGGA+GGG | - | chr8.2:39048581-39048600 | None:intergenic | 20.0% |
!! | ATATATAATCTCTTCAATGA+TGG | - | chr8.2:39048764-39048783 | None:intergenic | 20.0% |
!!! | AAGGTGAAGTTTTATTTTTA+TGG | + | chr8.2:39049136-39049155 | MS.gene25353:intron | 20.0% |
! | AAAGATTAACTGATATACCA+AGG | + | chr8.2:39049719-39049738 | MS.gene25353:CDS | 25.0% |
! | AAGATTAACTGATATACCAA+GGG | + | chr8.2:39049720-39049739 | MS.gene25353:CDS | 25.0% |
! | ATATCCTTCTATGTGAATAT+AGG | - | chr8.2:39049578-39049597 | None:intergenic | 25.0% |
! | CAATTGATTAAAAAGAAAGG+AGG | - | chr8.2:39048582-39048601 | None:intergenic | 25.0% |
! | GTGCAATTGATTAAAAAGAA+AGG | - | chr8.2:39048585-39048604 | None:intergenic | 25.0% |
! | TGATATTTCCAGTTACATTA+AGG | - | chr8.2:39048967-39048986 | None:intergenic | 25.0% |
! | TGTAACTGGAAATATCAAAT+TGG | + | chr8.2:39048970-39048989 | MS.gene25353:CDS | 25.0% |
AAGAGATTATATATCGACGT+AGG | + | chr8.2:39048770-39048789 | MS.gene25353:CDS | 30.0% | |
AATATCAAATTGGCCATCAT+TGG | + | chr8.2:39048980-39048999 | MS.gene25353:CDS | 30.0% | |
AGATTAACTGATATACCAAG+GGG | + | chr8.2:39049721-39049740 | MS.gene25353:CDS | 30.0% | |
ATTCACATAGAAGGATATCA+AGG | + | chr8.2:39049580-39049599 | MS.gene25353:CDS | 30.0% | |
TACATGATAACAACAAGTGA+TGG | - | chr8.2:39049203-39049222 | None:intergenic | 30.0% | |
TCTCATAATTCAAAGCAAGA+AGG | + | chr8.2:39049358-39049377 | MS.gene25353:CDS | 30.0% | |
! | AACTATCACCTTTAAGAACA+TGG | + | chr8.2:39049506-39049525 | MS.gene25353:CDS | 30.0% |
!! | CATTTGCTGAATATCTTTTG+AGG | + | chr8.2:39049620-39049639 | MS.gene25353:CDS | 30.0% |
CTGACCTATATTCACATAGA+AGG | + | chr8.2:39049571-39049590 | MS.gene25353:CDS | 35.0% | |
CTTCTATGTGAATATAGGTC+AGG | - | chr8.2:39049573-39049592 | None:intergenic | 35.0% | |
GATTAAAAAGAAAGGAGGGA+GGG | - | chr8.2:39048577-39048596 | None:intergenic | 35.0% | |
TATGTGAATATAGGTCAGGT+GGG | - | chr8.2:39049569-39049588 | None:intergenic | 35.0% | |
TCATATACTCTTTGCGATCT+CGG | - | chr8.2:39049090-39049109 | None:intergenic | 35.0% | |
TGAAGTAAATTGCGAAACTC+TGG | - | chr8.2:39049263-39049282 | None:intergenic | 35.0% | |
TGATTAAAAAGAAAGGAGGG+AGG | - | chr8.2:39048578-39048597 | None:intergenic | 35.0% | |
TGGAGTTACCTTAATGTAAC+TGG | + | chr8.2:39048956-39048975 | MS.gene25353:CDS | 35.0% | |
TTATGAGAACTTGAAGCATG+TGG | - | chr8.2:39049346-39049365 | None:intergenic | 35.0% | |
! | ATTGAACTTTTGAATGTCGC+GGG | - | chr8.2:39048433-39048452 | None:intergenic | 35.0% |
! | GATTGAACTTTTGAATGTCG+CGG | - | chr8.2:39048434-39048453 | None:intergenic | 35.0% |
! | TTCGTGTCATTCAACATCTA+AGG | + | chr8.2:39049117-39049136 | MS.gene25353:CDS | 35.0% |
!! | GCTGAATATCTTTTGAGGAA+CGG | + | chr8.2:39049625-39049644 | MS.gene25353:CDS | 35.0% |
!!! | GGTGTTTTGAAAAGACAAAC+AGG | - | chr8.2:39048697-39048716 | None:intergenic | 35.0% |
CGACAAATTCGCTTTCAACT+GGG | - | chr8.2:39049048-39049067 | None:intergenic | 40.0% | |
CTATGTGAATATAGGTCAGG+TGG | - | chr8.2:39049570-39049589 | None:intergenic | 40.0% | |
GACAAATTCGCTTTCAACTG+GGG | - | chr8.2:39049047-39049066 | None:intergenic | 40.0% | |
TCGACAAATTCGCTTTCAAC+TGG | - | chr8.2:39049049-39049068 | None:intergenic | 40.0% | |
TTTGTAACATAGCGACTCGT+CGG | - | chr8.2:39048343-39048362 | None:intergenic | 40.0% | |
! | AGAAGTTTGGTGACATAGTC+TGG | - | chr8.2:39048875-39048894 | None:intergenic | 40.0% |
! | CTCTGGATAGTTTAGAACAG+TGG | - | chr8.2:39049246-39049265 | None:intergenic | 40.0% |
! | GCACAAATCTTGTTTCTCTC+AGG | + | chr8.2:39048601-39048620 | MS.gene25353:CDS | 40.0% |
! | TTTAGAACAGTGGCATGAAG+TGG | - | chr8.2:39049236-39049255 | None:intergenic | 40.0% |
!! | AGGACATTCGAGTTGAAACA+GGG | - | chr8.2:39049302-39049321 | None:intergenic | 40.0% |
!! | TGGGTCAAATTTAAGTTGGC+AGG | - | chr8.2:39049755-39049774 | None:intergenic | 40.0% |
!! | TGTTGTCTCTTGTTGTTGGT+AGG | + | chr8.2:39049480-39049499 | MS.gene25353:intron | 40.0% |
ACCATCCAAAGTTTCCAGAC+CGG | - | chr8.2:39048834-39048853 | None:intergenic | 45.0% | |
ACTGTGGAAATGGCCAATGA+TGG | - | chr8.2:39048996-39049015 | None:intergenic | 45.0% | |
AGAGAGAGTTCTTGAAGGTG+AGG | - | chr8.2:39048531-39048550 | None:intergenic | 45.0% | |
ATATGCAACAGGAGTGAGTC+TGG | - | chr8.2:39048222-39048241 | None:intergenic | 45.0% | |
ATTAAGGTAACTCCAGCTCC+AGG | - | chr8.2:39048951-39048970 | None:intergenic | 45.0% | |
ATTTCTCAAGCACGTTGACC+AGG | - | chr8.2:39049322-39049341 | None:intergenic | 45.0% | |
CATTGGCCATTTCCACAGTA+TGG | + | chr8.2:39048997-39049016 | MS.gene25353:CDS | 45.0% | |
CGGCTGGGTCAAATTTAAGT+TGG | - | chr8.2:39049759-39049778 | None:intergenic | 45.0% | |
CTCACTATCACCAACCCATT+CGG | + | chr8.2:39048453-39048472 | MS.gene25353:CDS | 45.0% | |
CTGTTTCAACTCGAATGTCC+TGG | + | chr8.2:39049301-39049320 | MS.gene25353:CDS | 45.0% | |
CTTCCACCATACTGTGGAAA+TGG | - | chr8.2:39049006-39049025 | None:intergenic | 45.0% | |
GAAATGCTTCCACCATACTG+TGG | - | chr8.2:39049012-39049031 | None:intergenic | 45.0% | |
GAACTTCACACTCAAGTCTG+TGG | - | chr8.2:39048718-39048737 | None:intergenic | 45.0% | |
GAGAGAGTTCTTGAAGGTGA+GGG | - | chr8.2:39048530-39048549 | None:intergenic | 45.0% | |
GGAAGGACATGATATGCAAC+AGG | - | chr8.2:39048233-39048252 | None:intergenic | 45.0% | |
GGAAGGTGGAATGAGAAGTT+TGG | - | chr8.2:39048888-39048907 | None:intergenic | 45.0% | |
GTAGAAACATGCCACCGAAT+GGG | - | chr8.2:39048470-39048489 | None:intergenic | 45.0% | |
TACACGACTGTGTTCAACTG+TGG | + | chr8.2:39048487-39048506 | MS.gene25353:CDS | 45.0% | |
TATACTCTTTGCGATCTCGG+AGG | - | chr8.2:39049087-39049106 | None:intergenic | 45.0% | |
TCAGAAGTTGCCTTACTCTC+TGG | + | chr8.2:39048803-39048822 | MS.gene25353:CDS | 45.0% | |
TGTAGAAACATGCCACCGAA+TGG | - | chr8.2:39048471-39048490 | None:intergenic | 45.0% | |
TTTGAATGTCGCGGGATTTG+CGG | - | chr8.2:39048425-39048444 | None:intergenic | 45.0% | |
! | ACCTTTAAGAACATGGCAGC+CGG | + | chr8.2:39049513-39049532 | MS.gene25353:CDS | 45.0% |
! | AGGTGGGATTTGAGACATTC+AGG | - | chr8.2:39049553-39049572 | None:intergenic | 45.0% |
! | AGTTTGGTGACATAGTCTGG+AGG | - | chr8.2:39048872-39048891 | None:intergenic | 45.0% |
! | GGGATGTTGTCTCTTGTTGT+TGG | + | chr8.2:39049476-39049495 | MS.gene25353:intron | 45.0% |
! | GTTTGGTGACATAGTCTGGA+GGG | - | chr8.2:39048871-39048890 | None:intergenic | 45.0% |
!! | AGTGGTGGATTTCGATCTCT+TGG | - | chr8.2:39048918-39048937 | None:intergenic | 45.0% |
!! | CAGGACATTCGAGTTGAAAC+AGG | - | chr8.2:39049303-39049322 | None:intergenic | 45.0% |
!! | CTCGGAGGTGTTTGAGAATA+GGG | - | chr8.2:39049072-39049091 | None:intergenic | 45.0% |
!! | TCTCGGAGGTGTTTGAGAAT+AGG | - | chr8.2:39049073-39049092 | None:intergenic | 45.0% |
!! | TGTCTCTTGTTGTTGGTAGG+AGG | + | chr8.2:39049483-39049502 | MS.gene25353:intron | 45.0% |
AAACATGCCACCGAATGGGT+TGG | - | chr8.2:39048466-39048485 | None:intergenic | 50.0% | |
ACTATCACCAACCCATTCGG+TGG | + | chr8.2:39048456-39048475 | MS.gene25353:CDS | 50.0% | |
AGAACTCTCTCTCACCGTCA+AGG | + | chr8.2:39048539-39048558 | MS.gene25353:CDS | 50.0% | |
CATCCAAAGTTTCCAGACCG+GGG | - | chr8.2:39048832-39048851 | None:intergenic | 50.0% | |
CCACCACTGACAATTTCACC+TGG | + | chr8.2:39048930-39048949 | MS.gene25353:CDS | 50.0% | |
CCAGGTGAAATTGTCAGTGG+TGG | - | chr8.2:39048933-39048952 | None:intergenic | 50.0% | |
CCATCCAAAGTTTCCAGACC+GGG | - | chr8.2:39048833-39048852 | None:intergenic | 50.0% | |
CGGTGAGAGAGAGTTCTTGA+AGG | - | chr8.2:39048536-39048555 | None:intergenic | 50.0% | |
CGTCGGAGAAGTTGAAGACT+TGG | - | chr8.2:39048326-39048345 | None:intergenic | 50.0% | |
CTGACAATTTCACCTGGAGC+TGG | + | chr8.2:39048936-39048955 | MS.gene25353:CDS | 50.0% | |
GAAAGGAGGGAGGGTTATTG+CGG | - | chr8.2:39048568-39048587 | None:intergenic | 50.0% | |
GACGAGAGTCATCGTAGCTA+CGG | - | chr8.2:39048271-39048290 | None:intergenic | 50.0% | |
GCTCCAGGTGAAATTGTCAG+TGG | - | chr8.2:39048936-39048955 | None:intergenic | 50.0% | |
GGATTTCGATCTCTTGGAGC+TGG | - | chr8.2:39048912-39048931 | None:intergenic | 50.0% | |
GGTTATTGCGGAGTCCTTGA+CGG | - | chr8.2:39048556-39048575 | None:intergenic | 50.0% | |
TCCGGCTGCCATGTTCTTAA+AGG | - | chr8.2:39049517-39049536 | None:intergenic | 50.0% | |
TGGCCATTTCCACAGTATGG+TGG | + | chr8.2:39049000-39049019 | MS.gene25353:CDS | 50.0% | |
TTTCGATCTCTTGGAGCTGG+AGG | - | chr8.2:39048909-39048928 | None:intergenic | 50.0% | |
! | CTACGGAGGTTCTAGTAGGA+AGG | - | chr8.2:39048254-39048273 | None:intergenic | 50.0% |
! | GGAGGTTCTAGTAGGAAGGA+AGG | - | chr8.2:39048250-39048269 | None:intergenic | 50.0% |
! | GTAGCTACGGAGGTTCTAGT+AGG | - | chr8.2:39048258-39048277 | None:intergenic | 50.0% |
!! | TCAGGAACCGTTGTTGACTC+CGG | - | chr8.2:39049535-39049554 | None:intergenic | 50.0% |
AATGTCGCGGGATTTGCGGA+GGG | - | chr8.2:39048421-39048440 | None:intergenic | 55.0% | |
ATGGCAGCCGGAGTCAACAA+CGG | + | chr8.2:39049525-39049544 | MS.gene25353:CDS | 55.0% | |
CCCGGTCTGGAAACTTTGGA+TGG | + | chr8.2:39048830-39048849 | MS.gene25353:CDS | 55.0% | |
CCTTCCAGAGATAACGCCAC+CGG | - | chr8.2:39048299-39048318 | None:intergenic | 55.0% | |
GAGAGTCATCGTAGCTACGG+AGG | - | chr8.2:39048268-39048287 | None:intergenic | 55.0% | |
GATCTCTTGGAGCTGGAGGA+AGG | - | chr8.2:39048905-39048924 | None:intergenic | 55.0% | |
TTCTTGAAGGTGAGGGCCAG+TGG | - | chr8.2:39048523-39048542 | None:intergenic | 55.0% | |
CAGTGGCATGAAGTGGCGAC+TGG | - | chr8.2:39049229-39049248 | None:intergenic | 60.0% | |
CCGGTGGCGTTATCTCTGGA+AGG | + | chr8.2:39048296-39048315 | MS.gene25353:CDS | 60.0% | |
CGATGACTCTCGTCTCTCGC+CGG | + | chr8.2:39048277-39048296 | MS.gene25353:CDS | 60.0% | |
CTCTTGGAGCTGGAGGAAGG+TGG | - | chr8.2:39048902-39048921 | None:intergenic | 60.0% | |
CTGCCCCGGTCTGGAAACTT+TGG | + | chr8.2:39048826-39048845 | MS.gene25353:CDS | 60.0% | |
CTGTGGATCCTTGCTGCCAC+TGG | + | chr8.2:39048504-39048523 | MS.gene25353:CDS | 60.0% | |
GAATGTCGCGGGATTTGCGG+AGG | - | chr8.2:39048422-39048441 | None:intergenic | 60.0% | |
ACCGGGGCAGCCAGAGAGTA+AGG | - | chr8.2:39048816-39048835 | None:intergenic | 65.0% | |
CTCGCCGGTGGCGTTATCTC+TGG | + | chr8.2:39048292-39048311 | MS.gene25353:CDS | 65.0% | |
GCCTTACTCTCTGGCTGCCC+CGG | + | chr8.2:39048812-39048831 | MS.gene25353:CDS | 65.0% | |
TGACTCTCGTCTCTCGCCGG+TGG | + | chr8.2:39048280-39048299 | MS.gene25353:CDS | 65.0% | |
TGGCAGGTGACAGAGCCCCT+TGG | - | chr8.2:39049739-39049758 | None:intergenic | 65.0% | |
ACTCTCTGGCTGCCCCGGTC+TGG | + | chr8.2:39048817-39048836 | MS.gene25353:CDS | 70.0% | |
GGTGAGGGCCAGTGGCAGCA+AGG | - | chr8.2:39048515-39048534 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 39048177 | 39049789 | 39048177 | ID=MS.gene25353 |
chr8.2 | mRNA | 39048177 | 39049789 | 39048177 | ID=MS.gene25353.t1;Parent=MS.gene25353 |
chr8.2 | exon | 39048177 | 39048622 | 39048177 | ID=MS.gene25353.t1.exon1;Parent=MS.gene25353.t1 |
chr8.2 | CDS | 39048177 | 39048622 | 39048177 | ID=cds.MS.gene25353.t1;Parent=MS.gene25353.t1 |
chr8.2 | exon | 39048721 | 39049138 | 39048721 | ID=MS.gene25353.t1.exon2;Parent=MS.gene25353.t1 |
chr8.2 | CDS | 39048721 | 39049138 | 39048721 | ID=cds.MS.gene25353.t1;Parent=MS.gene25353.t1 |
chr8.2 | exon | 39049230 | 39049379 | 39049230 | ID=MS.gene25353.t1.exon3;Parent=MS.gene25353.t1 |
chr8.2 | CDS | 39049230 | 39049379 | 39049230 | ID=cds.MS.gene25353.t1;Parent=MS.gene25353.t1 |
chr8.2 | exon | 39049502 | 39049789 | 39049502 | ID=MS.gene25353.t1.exon4;Parent=MS.gene25353.t1 |
chr8.2 | CDS | 39049502 | 39049789 | 39049502 | ID=cds.MS.gene25353.t1;Parent=MS.gene25353.t1 |
Gene Sequence |
Protein sequence |