AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene72958


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72958.t1 MTR_8g468810 92.275 466 33 2 1 466 1 463 0.0 867
MS.gene72958.t1 MTR_8g468810 93.048 374 23 2 1 374 1 371 0.0 696
MS.gene72958.t1 MTR_8g468810 92.790 319 20 2 1 319 1 316 0.0 588
MS.gene72958.t1 MTR_8g468810 93.082 318 19 2 1 318 1 315 0.0 588
MS.gene72958.t1 MTR_8g468810 93.082 318 19 2 1 318 1 315 0.0 588
MS.gene72958.t1 MTR_8g058970 65.155 485 142 4 1 466 1 477 0.0 585
MS.gene72958.t1 MTR_2g083840 54.430 474 191 10 1 466 1 457 5.07e-158 456
MS.gene72958.t1 MTR_4g032730 49.174 484 197 12 12 465 2 466 1.21e-137 404
MS.gene72958.t1 MTR_8g062270 49.890 455 196 12 26 465 16 453 9.02e-133 391
MS.gene72958.t1 MTR_8g468840 50.780 449 197 11 26 464 14 448 5.52e-131 386
MS.gene72958.t1 MTR_8g467800 49.684 475 202 12 5 466 3 453 1.19e-130 386
MS.gene72958.t1 MTR_5g092960 49.893 469 196 12 15 465 14 461 6.79e-127 376
MS.gene72958.t1 MTR_8g468760 50.000 466 171 12 13 465 2 418 1.35e-126 374
MS.gene72958.t1 MTR_8g014260 42.857 476 237 17 1 466 1 451 4.90e-102 312
MS.gene72958.t1 MTR_8g058965 44.068 472 230 13 12 466 2 456 3.31e-101 310
MS.gene72958.t1 MTR_5g092960 49.733 374 158 10 15 374 14 371 5.28e-95 293
MS.gene72958.t1 MTR_8g469020 40.998 461 238 13 25 466 6 451 6.39e-95 294
MS.gene72958.t1 MTR_8g070950 40.123 486 219 16 1 466 1 434 2.64e-91 284
MS.gene72958.t1 MTR_8g445780 44.418 421 197 14 1 416 1 389 2.64e-90 280
MS.gene72958.t1 MTR_8g467800 53.698 311 127 7 5 310 3 301 1.53e-85 266
MS.gene72958.t1 MTR_4g050250 43.088 434 201 14 2 408 4 418 5.68e-85 268
MS.gene72958.t1 MTR_8g062080 39.323 473 242 16 5 466 7 445 3.04e-80 256
MS.gene72958.t1 MTR_8g062010 40.402 448 234 14 26 466 9 430 5.60e-80 255
MS.gene72958.t1 MTR_8g062310 38.280 465 243 14 4 466 6 428 2.39e-77 248
MS.gene72958.t1 MTR_8g062300 36.874 499 260 14 1 466 1 477 1.65e-74 242
MS.gene72958.t1 MTR_8g014160 39.617 313 176 8 17 320 32 340 1.81e-58 198
MS.gene72958.t1 MTR_8g014160 48.718 78 37 1 389 466 351 425 8.11e-14 73.6
MS.gene72958.t1 MTR_4g024710 42.434 304 156 11 168 466 58 347 1.83e-54 186
MS.gene72958.t1 MTR_8g467790 36.111 396 186 14 26 406 148 491 5.75e-54 189
MS.gene72958.t1 MTR_8g014210 45.679 243 119 9 225 466 1 231 1.87e-46 161
MS.gene72958.t1 MTR_8g077460 42.174 230 126 5 18 242 2 229 1.78e-44 160
MS.gene72958.t1 MTR_8g077460 33.457 269 149 9 206 466 129 375 4.16e-29 118
MS.gene72958.t1 MTR_4g024745 40.925 281 152 9 166 442 10 280 6.71e-43 153
MS.gene72958.t1 MTR_5g021550 50.877 171 71 6 1 167 1 162 6.92e-41 144
MS.gene72958.t1 MTR_8g014290 43.750 160 80 6 18 168 2 160 2.27e-32 121
MS.gene72958.t1 MTR_4g024720 39.362 188 81 8 1 167 1 176 4.28e-28 111
MS.gene72958.t1 MTR_5g080710 29.306 447 271 19 25 458 32 446 2.65e-27 114
MS.gene72958.t1 MTR_7g098510 27.753 454 243 14 22 466 14 391 2.04e-26 110
MS.gene72958.t1 MTR_1g041245 38.500 200 99 7 25 217 10 192 5.43e-26 109
MS.gene72958.t1 MTR_5g084070 28.401 419 252 17 25 431 12 394 1.88e-24 105
MS.gene72958.t1 MTR_3g108150 28.879 464 230 18 19 465 6 386 2.83e-24 104
MS.gene72958.t1 MTR_3g082890 29.268 451 246 18 26 466 97 484 2.45e-23 102
MS.gene72958.t1 MTR_7g033915 28.540 459 208 19 24 465 9 364 3.89e-23 100
MS.gene72958.t1 MTR_8g014220 34.562 217 80 7 1 212 1 160 1.12e-22 94.7
MS.gene72958.t1 MTR_7g033990 27.549 461 220 17 21 458 6 375 1.15e-22 100
MS.gene72958.t1 MTR_3g023630 26.222 450 232 18 23 459 5 367 1.63e-21 96.3
MS.gene72958.t1 MTR_3g105060 26.786 448 237 19 24 466 12 373 1.79e-21 96.3
MS.gene72958.t1 MTR_7g026500 25.895 475 261 14 1 465 1 394 2.69e-21 95.9
MS.gene72958.t1 MTR_2g008310 25.951 447 248 16 26 466 2 371 3.15e-21 95.9
MS.gene72958.t1 MTR_4g056040 28.125 448 259 17 21 423 4 433 5.38e-21 95.9
MS.gene72958.t1 MTR_2g008320 26.549 452 245 16 26 466 52 427 6.22e-21 95.5
MS.gene72958.t1 MTR_6g022500 27.990 418 222 16 22 431 97 443 7.52e-21 95.5
MS.gene72958.t1 MTR_3g108560 27.703 444 242 16 26 465 20 388 1.03e-20 94.0
MS.gene72958.t1 MTR_2g086020 41.333 150 67 6 52 193 1 137 1.12e-20 92.8
MS.gene72958.t1 MTR_2g086020 42.202 109 61 1 358 466 209 315 9.12e-18 84.3
MS.gene72958.t1 MTR_7g056430 27.928 444 216 17 26 459 9 358 1.60e-20 95.5
MS.gene72958.t1 MTR_7g056420 27.865 445 217 17 26 460 9 359 1.69e-20 95.5
MS.gene72958.t1 MTR_3g107120 28.070 456 238 19 24 463 7 388 1.71e-20 93.6
MS.gene72958.t1 MTR_3g107100 32.283 254 149 11 20 266 5 242 2.19e-20 93.2
MS.gene72958.t1 MTR_7g032380 35.784 204 113 7 18 217 3 192 2.57e-20 92.4
MS.gene72958.t1 MTR_7g032380 32.394 142 86 3 332 466 218 356 4.69e-11 64.7
MS.gene72958.t1 MTR_7g098570 26.222 450 253 13 19 462 13 389 3.07e-20 93.6
MS.gene72958.t1 MTR_3g087260 28.008 482 268 15 26 465 12 456 3.09e-20 93.2
MS.gene72958.t1 MTR_7g056447 34.314 204 104 10 21 215 4 186 1.76e-19 89.0
MS.gene72958.t1 MTR_2g007450 27.893 484 255 21 6 463 2 417 8.81e-19 88.6
MS.gene72958.t1 MTR_3g082890 26.654 514 256 20 1 466 1 441 1.38e-18 88.2
MS.gene72958.t1 MTR_4g113810 32.571 175 101 6 108 272 1 168 2.00e-18 82.8
MS.gene72958.t1 MTR_4g056070 27.803 446 237 19 21 405 4 425 2.42e-18 87.4
MS.gene72958.t1 MTR_4g056020 28.169 426 257 18 21 423 4 403 3.17e-18 87.4
MS.gene72958.t1 MTR_1089s0010 25.821 457 238 19 26 466 8 379 4.70e-18 86.3
MS.gene72958.t1 MTR_3g036250 33.333 198 114 6 25 217 4 188 6.66e-18 85.5
MS.gene72958.t1 MTR_3g040700 30.275 218 132 6 7 217 22 226 6.73e-18 86.3
MS.gene72958.t1 MTR_7g055943 25.758 462 250 18 22 466 36 421 9.24e-18 85.5
MS.gene72958.t1 MTR_8g085430 31.343 268 137 11 22 274 7 242 9.81e-18 84.3
MS.gene72958.t1 MTR_2g007500 35.323 201 107 6 21 219 9 188 1.71e-17 84.0
MS.gene72958.t1 MTR_6g011460 25.000 464 274 15 7 466 28 421 2.34e-17 84.3
MS.gene72958.t1 MTR_3g107160 31.401 207 125 7 21 220 2 198 4.12e-17 83.2
MS.gene72958.t1 MTR_3g099830 31.731 208 107 9 19 219 5 184 5.34e-17 82.8
MS.gene72958.t1 MTR_5g008920 37.745 204 99 11 23 217 6 190 8.31e-17 82.4
MS.gene72958.t1 MTR_7g088260 24.468 470 272 12 4 466 69 462 2.60e-16 81.3
MS.gene72958.t1 MTR_5g008950 32.857 210 112 11 28 231 1 187 4.18e-16 80.1
MS.gene72958.t1 MTR_1g108820 26.829 451 244 18 25 463 7 383 2.33e-15 78.2
MS.gene72958.t1 MTR_4g024770 49.315 73 27 2 1 73 8 70 3.89e-15 70.9
MS.gene72958.t1 MTR_1g038710 26.374 455 290 18 9 440 2 434 5.68e-15 77.4
MS.gene72958.t1 MTR_7g033945 36.612 183 89 9 24 196 9 174 6.68e-15 73.2
MS.gene72958.t1 MTR_5g073420 32.990 194 118 8 26 216 11 195 1.28e-14 75.9
MS.gene72958.t1 MTR_7g034110 31.760 233 131 10 24 247 9 222 1.41e-14 75.1
MS.gene72958.t1 MTR_6g022360 27.725 422 208 17 22 431 39 375 1.90e-14 75.5
MS.gene72958.t1 MTR_3g048290 27.273 451 264 22 26 441 23 444 4.28e-14 74.7
MS.gene72958.t1 MTR_7g115270 32.381 210 124 7 19 220 5 204 4.63e-14 73.9
MS.gene72958.t1 MTR_1g085120 24.301 465 257 17 19 466 85 471 5.91e-14 74.3
MS.gene72958.t1 MTR_5g058100 33.816 207 117 10 19 220 2 193 6.03e-14 73.6
MS.gene72958.t1 MTR_1g085120 24.301 465 257 17 19 466 160 546 1.15e-13 73.6
MS.gene72958.t1 MTR_2g072720 22.547 479 321 13 11 465 24 476 2.12e-13 72.4
MS.gene72958.t1 MTR_4g080787 25.056 443 265 21 26 431 19 431 2.81e-13 72.0
MS.gene72958.t1 MTR_3g071850 24.286 420 243 14 23 431 21 376 2.82e-13 72.8
MS.gene72958.t1 MTR_7g056433 32.161 199 123 6 26 222 12 200 3.25e-13 71.6
MS.gene72958.t1 MTR_5g058000 36.792 212 103 12 21 222 3 193 6.81e-13 70.5
MS.gene72958.t1 MTR_7g034115 32.057 209 114 9 25 224 10 199 9.46e-13 70.1
MS.gene72958.t1 MTR_8g014230 50.685 73 32 2 384 456 27 95 2.26e-12 63.5
MS.gene72958.t1 MTR_5g083890 31.579 209 123 8 26 219 6 209 3.44e-12 68.9
MS.gene72958.t1 MTR_2g100590 27.500 200 135 3 24 218 40 234 3.46e-12 68.6
MS.gene72958.t1 MTR_7g098480 33.333 198 117 5 22 217 14 198 3.55e-12 68.6
MS.gene72958.t1 MTR_2g100590 27.500 200 135 3 24 218 40 234 3.59e-12 68.6
MS.gene72958.t1 MTR_2g100590 27.778 198 133 3 24 216 40 232 4.32e-12 68.6
MS.gene72958.t1 MTR_4g080773 25.397 441 269 21 26 431 19 434 6.40e-12 67.8
MS.gene72958.t1 MTR_7g114710 32.057 209 118 9 26 227 13 204 6.93e-12 67.0
MS.gene72958.t1 MTR_4g080773 25.397 441 269 21 26 431 19 434 1.02e-11 67.4
MS.gene72958.t1 MTR_7g032370 33.333 183 105 7 38 217 2 170 1.46e-11 66.2
MS.gene72958.t1 MTR_4g090940 27.515 338 184 15 2 311 138 442 2.32e-11 66.2
MS.gene72958.t1 MTR_4g093690 30.631 222 123 10 1 214 1 199 2.75e-11 64.3
MS.gene72958.t1 MTR_6g044560 29.661 236 134 11 7 218 161 388 2.85e-11 65.9
MS.gene72958.t1 MTR_2g048140 23.241 469 317 16 24 466 5 456 3.83e-11 65.5
MS.gene72958.t1 MTR_2g005990 28.638 213 120 7 25 219 5 203 5.16e-11 64.7
MS.gene72958.t1 MTR_2g007360 28.986 207 104 8 19 219 5 174 5.40e-11 64.7
MS.gene72958.t1 MTR_5g061680 32.143 196 115 8 26 216 11 193 7.11e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72958.t1 AT1G16930 28.807 486 276 19 13 466 2 449 3.54e-34 133
MS.gene72958.t1 AT1G16930 28.807 486 276 19 13 466 2 449 3.54e-34 133
MS.gene72958.t1 AT1G16930 28.807 486 276 19 13 466 2 449 3.54e-34 133
MS.gene72958.t1 AT5G56420 28.261 460 268 19 26 466 6 422 8.63e-31 123
MS.gene72958.t1 AT5G56420 28.261 460 268 19 26 466 6 422 8.63e-31 123
MS.gene72958.t1 AT5G56420 28.261 460 268 19 26 466 6 422 8.63e-31 123
MS.gene72958.t1 AT4G26340 28.947 456 271 18 26 466 2 419 2.68e-30 122
MS.gene72958.t1 AT5G60610 28.469 418 256 15 26 432 2 387 1.21e-26 111
MS.gene72958.t1 AT5G60610 28.469 418 256 15 26 432 2 387 1.21e-26 111
MS.gene72958.t1 AT5G56370 27.826 460 271 17 26 465 2 420 7.91e-26 109
MS.gene72958.t1 AT5G56370 27.826 460 271 17 26 465 2 420 7.91e-26 109
MS.gene72958.t1 AT5G56400 27.195 467 284 18 19 466 26 455 2.49e-25 108
MS.gene72958.t1 AT5G53840 26.522 460 294 19 18 463 8 437 1.64e-24 105
MS.gene72958.t1 AT4G10400 25.670 448 284 14 26 465 2 408 2.15e-24 105
MS.gene72958.t1 AT4G10400 25.670 448 284 14 26 465 2 408 2.15e-24 105
MS.gene72958.t1 AT4G10400 25.670 448 284 14 26 465 2 408 2.15e-24 105
MS.gene72958.t1 AT4G00160 30.303 462 264 19 26 465 16 441 2.25e-24 105
MS.gene72958.t1 AT1G80470 27.837 467 267 23 23 463 12 434 2.61e-24 105
MS.gene72958.t1 AT2G26030 26.931 479 269 20 24 463 2 438 2.90e-24 105
MS.gene72958.t1 AT2G26030 26.931 479 269 20 24 463 2 438 2.90e-24 105
MS.gene72958.t1 AT1G78750 25.786 477 305 18 11 463 4 455 3.05e-24 105
MS.gene72958.t1 AT1G78750 25.786 477 305 18 11 463 4 455 3.05e-24 105
MS.gene72958.t1 AT1G32375 26.419 458 283 16 26 466 2 422 3.37e-24 104
MS.gene72958.t1 AT1G32375 26.419 458 283 16 26 466 2 422 3.37e-24 104
MS.gene72958.t1 AT2G04230 28.929 439 260 16 15 432 2 409 5.13e-24 104
MS.gene72958.t1 AT2G26030 26.240 484 271 21 24 463 2 443 7.27e-24 103
MS.gene72958.t1 AT1G78760 25.949 474 293 20 11 463 4 440 1.92e-23 102
MS.gene72958.t1 AT5G62970 27.273 473 285 19 26 465 2 448 2.50e-23 102
MS.gene72958.t1 AT1G66300 27.236 492 290 25 1 463 1 453 3.28e-23 102
MS.gene72958.t1 AT5G22720 27.273 484 278 22 20 465 17 464 1.66e-22 100
MS.gene72958.t1 AT5G56440 25.597 461 289 16 26 465 2 429 2.58e-22 99.4
MS.gene72958.t1 AT5G38590 26.190 420 258 15 26 431 2 383 3.11e-22 99.0
MS.gene72958.t1 AT4G14103 33.456 272 154 12 26 285 8 264 1.15e-21 97.1
MS.gene72958.t1 AT4G14103 33.456 272 154 12 26 285 8 264 1.15e-21 97.1
MS.gene72958.t1 AT4G14103 33.456 272 154 12 26 285 8 264 1.65e-21 97.1
MS.gene72958.t1 AT5G53635 25.541 462 282 17 28 465 2 425 2.04e-21 96.7
MS.gene72958.t1 AT5G22730 27.273 495 284 20 6 463 8 463 2.27e-21 97.1
MS.gene72958.t1 AT5G22730 27.273 495 284 20 6 463 8 463 2.27e-21 97.1
MS.gene72958.t1 AT3G50710 26.350 463 282 17 26 466 2 427 2.28e-21 96.7
MS.gene72958.t1 AT1G66310 25.996 477 286 19 12 463 5 439 3.07e-21 96.3
MS.gene72958.t1 AT1G69630 27.254 477 277 25 18 463 11 448 1.30e-20 94.4
MS.gene72958.t1 AT5G38570 26.222 450 246 17 26 465 2 375 4.91e-20 92.0
MS.gene72958.t1 AT3G26922 32.787 305 165 14 19 310 7 284 5.40e-20 90.9
MS.gene72958.t1 AT3G26922 32.787 305 165 14 19 310 7 284 5.40e-20 90.9
MS.gene72958.t1 AT4G13965 27.957 465 269 20 18 463 3 420 5.94e-20 92.4
MS.gene72958.t1 AT1G13780 26.013 469 290 19 26 463 10 452 7.36e-20 92.4
MS.gene72958.t1 AT1G66290 25.956 497 287 25 1 463 1 450 8.07e-20 92.0
MS.gene72958.t1 AT5G56700 28.493 365 221 15 92 443 22 359 1.31e-19 90.5
MS.gene72958.t1 AT1G05080 27.253 455 287 17 26 465 13 438 2.07e-19 90.9
MS.gene72958.t1 AT4G13985 24.797 492 305 18 1 463 1 456 2.62e-19 90.5
MS.gene72958.t1 AT4G14096 29.213 267 170 9 26 285 8 262 5.24e-19 89.7
MS.gene72958.t1 AT4G14096 29.213 267 170 9 26 285 8 262 5.24e-19 89.7
MS.gene72958.t1 AT5G56820 25.918 490 246 20 18 463 7 423 6.19e-19 89.4
MS.gene72958.t1 AT1G55660 26.030 461 298 17 26 465 53 491 6.73e-19 89.7
MS.gene72958.t1 AT1G51370 26.593 455 276 20 26 463 19 432 8.76e-19 89.0
MS.gene72958.t1 AT5G27750 27.778 450 253 19 26 432 5 425 1.13e-18 88.6
MS.gene72958.t1 AT1G55660 30.612 245 153 8 26 263 53 287 1.48e-18 87.4
MS.gene72958.t1 AT1G22000 25.216 464 276 18 27 463 30 449 2.58e-18 87.8
MS.gene72958.t1 AT3G58940 26.477 457 245 20 26 439 2 410 2.76e-18 88.2
MS.gene72958.t1 AT3G58940 26.477 457 245 20 26 439 2 410 2.76e-18 88.2
MS.gene72958.t1 AT3G49030 27.313 454 256 19 26 465 21 414 2.82e-18 87.0
MS.gene72958.t1 AT3G59200 28.975 283 173 13 26 295 7 274 4.15e-18 86.3
MS.gene72958.t1 AT5G56410 26.437 435 252 17 33 432 10 411 5.55e-18 86.7
MS.gene72958.t1 AT4G00315 26.898 461 294 18 26 465 2 440 5.57e-18 86.7
MS.gene72958.t1 AT5G38590 30.597 268 160 13 26 284 2 252 6.52e-18 84.3
MS.gene72958.t1 AT3G49480 25.624 441 254 16 26 432 12 412 6.72e-18 86.3
MS.gene72958.t1 AT3G59200 28.975 283 173 13 26 295 7 274 9.51e-18 86.3
MS.gene72958.t1 AT4G26350 25.696 467 281 18 26 466 2 428 1.79e-17 84.7
MS.gene72958.t1 AT5G56370 29.010 293 176 11 26 312 2 268 2.13e-17 83.6
MS.gene72958.t1 AT1G06630 28.826 281 177 9 26 295 12 280 2.75e-17 82.8
MS.gene72958.t1 AT5G56560 25.333 450 289 17 27 466 6 418 2.86e-17 84.0
MS.gene72958.t1 AT4G10420 26.012 346 222 14 128 465 2 321 3.30e-17 82.8
MS.gene72958.t1 AT5G22610 24.842 475 293 19 26 464 18 464 3.86e-17 84.3
MS.gene72958.t1 AT3G49030 27.430 463 270 22 26 465 21 440 3.90e-17 84.0
MS.gene72958.t1 AT5G44980 27.842 431 255 22 24 429 2 401 3.99e-17 84.0
MS.gene72958.t1 AT5G44980 27.842 431 255 22 24 429 2 401 3.99e-17 84.0
MS.gene72958.t1 AT1G06630 28.826 281 177 9 26 295 12 280 4.36e-17 82.8
MS.gene72958.t1 AT1G06630 28.826 281 177 9 26 295 12 280 4.36e-17 82.8
MS.gene72958.t1 AT1G06630 28.826 281 177 9 26 295 12 280 6.25e-17 82.8
MS.gene72958.t1 AT1G06630 28.826 281 177 9 26 295 12 280 6.25e-17 82.8
MS.gene72958.t1 AT1G06630 28.826 281 177 9 26 295 12 280 6.25e-17 82.8
MS.gene72958.t1 AT1G06630 28.826 281 177 9 26 295 12 280 6.25e-17 82.8
MS.gene72958.t1 AT1G06630 28.826 281 177 9 26 295 21 289 6.56e-17 83.2
MS.gene72958.t1 AT3G59170 28.904 301 171 10 22 285 3 297 6.97e-17 83.2
MS.gene72958.t1 AT3G26922 31.148 305 145 13 19 310 7 259 7.32e-17 81.3
MS.gene72958.t1 AT5G41840 25.917 436 242 19 26 401 14 428 7.59e-17 83.6
MS.gene72958.t1 AT1G06630 28.826 281 177 9 26 295 12 280 1.10e-16 82.8
MS.gene72958.t1 AT5G44950 26.364 440 278 18 26 444 4 418 1.12e-16 82.4
MS.gene72958.t1 AT5G41830 25.908 413 256 14 26 407 13 406 1.44e-16 82.4
MS.gene72958.t1 AT3G58920 24.056 503 284 20 26 466 2 468 2.12e-16 81.6
MS.gene72958.t1 AT5G56380 27.097 465 288 21 26 466 2 439 2.42e-16 81.6
MS.gene72958.t1 AT5G56380 27.097 465 288 21 26 466 2 439 2.42e-16 81.6
MS.gene72958.t1 AT5G18780 26.427 473 284 23 18 463 3 438 2.49e-16 81.3
MS.gene72958.t1 AT5G18780 26.427 473 284 23 18 463 3 438 2.49e-16 81.3
MS.gene72958.t1 AT5G22610 24.078 461 284 18 26 464 18 434 2.54e-16 81.6
MS.gene72958.t1 AT5G41630 29.688 256 151 8 26 259 12 260 4.15e-16 80.9
MS.gene72958.t1 AT3G58860 29.779 272 173 11 26 290 7 267 5.29e-16 80.5
MS.gene72958.t1 AT5G56810 27.950 483 269 23 13 465 2 435 6.42e-16 80.1
MS.gene72958.t1 AT5G22700 26.452 465 251 20 15 436 33 449 6.50e-16 80.5
MS.gene72958.t1 AT5G22700 26.432 454 244 19 26 436 6 412 7.55e-16 80.1
MS.gene72958.t1 AT5G22700 26.432 454 244 19 26 436 6 412 7.55e-16 80.1
MS.gene72958.t1 AT5G22700 26.432 454 244 19 26 436 6 412 7.55e-16 80.1
MS.gene72958.t1 AT5G22700 26.432 454 244 19 26 436 6 412 7.55e-16 80.1
MS.gene72958.t1 AT5G56390 26.709 468 270 18 26 465 2 424 8.21e-16 79.7
MS.gene72958.t1 AT5G56690 23.888 427 271 15 28 431 4 399 1.09e-15 79.3
MS.gene72958.t1 AT4G09920 27.304 293 185 11 26 310 2 274 1.45e-15 77.8
MS.gene72958.t1 AT4G09920 27.304 293 185 11 26 310 2 274 1.45e-15 77.8
MS.gene72958.t1 AT3G26930 27.484 473 276 21 18 466 14 443 1.58e-15 79.0
MS.gene72958.t1 AT4G09920 28.041 296 179 13 26 310 2 274 2.09e-15 77.0
MS.gene72958.t1 AT4G09920 28.041 296 179 13 26 310 2 274 2.09e-15 77.0
MS.gene72958.t1 AT4G09920 28.041 296 179 13 26 310 2 274 2.09e-15 77.0
MS.gene72958.t1 AT5G38390 32.117 274 145 14 26 286 2 247 6.39e-15 77.0
MS.gene72958.t1 AT4G15060 26.368 402 239 16 20 401 20 384 1.16e-14 76.3
MS.gene72958.t1 AT5G50270 26.498 434 272 17 26 442 2 405 1.34e-14 75.9
MS.gene72958.t1 AT3G44810 30.556 252 153 9 21 259 2 244 1.37e-14 76.3
MS.gene72958.t1 AT3G59190 30.952 252 149 13 26 263 12 252 2.94e-14 74.7
MS.gene72958.t1 AT3G59190 30.952 252 149 13 26 263 12 252 3.63e-14 75.1
MS.gene72958.t1 AT3G26920 27.763 371 223 16 108 465 1 339 6.30e-14 73.2
MS.gene72958.t1 AT3G26920 27.763 371 223 16 108 465 1 339 6.30e-14 73.2
MS.gene72958.t1 AT3G58980 24.590 488 270 22 26 464 2 440 6.63e-14 74.3
MS.gene72958.t1 AT4G00320 27.099 262 155 7 26 259 13 266 6.64e-14 74.3
MS.gene72958.t1 AT3G54910 25.862 406 238 16 81 466 11 373 6.88e-14 73.6
MS.gene72958.t1 AT3G54910 25.862 406 238 16 81 466 11 373 6.88e-14 73.6
MS.gene72958.t1 AT3G54910 25.862 406 238 16 81 466 11 373 6.88e-14 73.6
MS.gene72958.t1 AT5G18770 24.729 461 297 17 26 462 24 458 9.04e-14 73.6
MS.gene72958.t1 AT1G66320 24.948 485 294 23 7 463 12 454 9.13e-14 73.6
MS.gene72958.t1 AT5G22730 27.456 397 227 16 6 370 8 375 1.09e-13 73.2
MS.gene72958.t1 AT1G13780 29.368 269 157 10 26 272 10 267 1.21e-13 72.4
MS.gene72958.t1 AT1G51370 26.382 398 240 18 26 407 19 379 1.32e-13 72.8
MS.gene72958.t1 AT5G18780 31.679 262 140 13 18 263 3 241 1.96e-13 72.0
MS.gene72958.t1 AT5G18780 31.679 262 140 13 18 263 3 241 1.96e-13 72.0
MS.gene72958.t1 AT4G15060 28.315 279 169 11 24 284 170 435 2.54e-13 72.4
MS.gene72958.t1 AT5G22700 25.740 439 246 19 15 436 33 408 3.60e-13 71.6
MS.gene72958.t1 AT3G59210 32.828 198 119 7 26 218 7 195 5.44e-13 71.2
MS.gene72958.t1 AT3G59210 32.828 198 119 7 26 218 7 195 5.44e-13 71.2
MS.gene72958.t1 AT3G59210 32.828 198 119 7 26 218 7 195 5.44e-13 71.2
MS.gene72958.t1 AT3G59210 32.828 198 119 7 26 218 7 195 5.44e-13 71.2
MS.gene72958.t1 AT3G59210 32.828 198 119 7 26 218 7 195 5.44e-13 71.2
MS.gene72958.t1 AT5G53640 28.837 215 127 8 7 216 3 196 6.72e-13 68.6
MS.gene72958.t1 AT5G38386 25.175 429 245 19 26 438 2 370 1.45e-12 69.7
MS.gene72958.t1 AT5G38386 25.175 429 245 19 26 438 2 370 1.45e-12 69.7
MS.gene72958.t1 AT3G49150 30.859 256 151 13 17 259 7 249 2.35e-12 69.3
MS.gene72958.t1 AT1G55030 28.037 428 262 19 17 432 7 400 2.65e-12 68.9
MS.gene72958.t1 AT5G27750 26.823 384 218 15 26 370 5 364 2.81e-12 68.6
MS.gene72958.t1 AT4G22280 27.597 308 164 13 26 310 2 273 6.21e-12 67.0
MS.gene72958.t1 AT3G26922 31.206 282 154 14 42 310 1 255 6.50e-12 66.6
MS.gene72958.t1 AT3G26922 31.206 282 154 14 42 310 1 255 6.50e-12 66.6
MS.gene72958.t1 AT4G22280 27.597 308 164 13 26 310 2 273 7.03e-12 67.4
MS.gene72958.t1 AT5G02930 26.510 298 174 11 2 285 4 270 7.69e-12 67.8
MS.gene72958.t1 AT3G58880 27.335 439 264 20 25 431 2 417 7.80e-12 67.4
MS.gene72958.t1 AT5G56560 27.612 268 149 8 27 283 6 239 1.09e-11 67.4
MS.gene72958.t1 AT5G18770 26.974 304 186 10 26 310 24 310 1.24e-11 66.6
MS.gene72958.t1 AT3G60040 27.305 282 173 12 26 285 13 284 1.59e-11 67.0
MS.gene72958.t1 AT3G59230 27.626 257 156 12 26 263 12 257 2.12e-11 66.2
MS.gene72958.t1 AT1G55030 28.058 417 257 18 25 432 8 390 2.27e-11 65.9
MS.gene72958.t1 AT5G56570 23.543 446 290 17 28 466 38 439 3.15e-11 65.5
MS.gene72958.t1 AT3G26930 25.513 439 262 19 52 466 1 398 3.36e-11 65.5
MS.gene72958.t1 AT3G60040 27.305 282 173 12 26 285 232 503 3.63e-11 66.2
MS.gene72958.t1 AT3G60040 27.305 282 173 12 26 285 233 504 3.64e-11 66.2
MS.gene72958.t1 AT3G49480 27.148 291 167 10 161 432 8 272 3.64e-11 64.7
MS.gene72958.t1 AT3G60040 27.305 282 173 12 26 285 232 503 4.95e-11 65.5
MS.gene72958.t1 AT3G60040 27.305 282 173 12 26 285 230 501 5.21e-11 65.5

Find 104 sgRNAs with CRISPR-Local

Find 127 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGACCTATATTCACTTTAA+AGG 0.147428 8.3:+41857752 MS.gene72958:CDS
TTGAAGACAATGCTTATTTC+TGG 0.178189 8.3:+41857836 MS.gene72958:CDS
TTTGGCAATGCAACTTCTAT+TGG 0.243149 8.3:+41857161 MS.gene72958:CDS
CGTCTTTCTTGCGGCCAATA+TGG 0.290758 8.3:+41856550 MS.gene72958:CDS
AGTTCCAAAGTTTCTAAGAT+TGG 0.318329 8.3:-41856996 None:intergenic
TACCAAAAGAAGAGATTATT+AGG 0.340479 8.3:+41857420 MS.gene72958:intron
AAGACACTACAACTAGAAAT+TGG 0.343256 8.3:+41856930 MS.gene72958:CDS
ATTCACTTTAAAGGATATAT+AGG 0.344348 8.3:+41857761 MS.gene72958:CDS
TGGTGAAATATTTGTGGAAT+TGG 0.346093 8.3:+41856875 MS.gene72958:CDS
GAGGACGCCGCTGACGAATA+TGG 0.362608 8.3:-41856494 None:intergenic
TTGGCAATGCAACTTCTATT+GGG 0.363130 8.3:+41857162 MS.gene72958:CDS
TTCGGCCTCTCTATCGCAAT+CGG 0.367347 8.3:-41856455 None:intergenic
AAGTGGGATACTAGACAATT+AGG 0.367479 8.3:-41857731 None:intergenic
TGCATTGCCAAATGTGATAT+TGG 0.374879 8.3:-41857150 None:intergenic
GTTAACGTACACAGTCTCTA+TGG 0.377657 8.3:+41856855 MS.gene72958:intron
TGGGGAGGAAGGAAAGTATA+TGG 0.387271 8.3:-41856336 None:intergenic
CCGAATCTTTGGCCAAGCTT+AGG 0.388638 8.3:+41857030 MS.gene72958:CDS
CGAATCTTTGGCCAAGCTTA+GGG 0.393635 8.3:+41857031 MS.gene72958:CDS
AGCCTCACCAATATCACATT+TGG 0.403388 8.3:+41857143 MS.gene72958:CDS
TCGTCTTCTTCTTCTCCTCC+TGG 0.405287 8.3:-41856253 None:intergenic
TGCGAAGTACCCGCGACATT+CGG 0.408630 8.3:+41856521 MS.gene72958:CDS
TCGGCCTCTCTATCGCAATC+GGG 0.418289 8.3:-41856454 None:intergenic
ATATGGCATAAGAGAGAGTC+TGG 0.419464 8.3:-41856319 None:intergenic
CGTGGATCCGCACCGCCGTT+GGG 0.424276 8.3:+41856605 MS.gene72958:CDS
ACTCTCCTCCAAGCTCTCTC+TGG 0.432658 8.3:+41857260 MS.gene72958:CDS
CTCATAGGTATCTTCATCTC+TGG 0.437215 8.3:+41856392 MS.gene72958:CDS
GTTTAATGCCAGAGAGAGCT+TGG 0.438724 8.3:-41857268 None:intergenic
CCTAAGCTTGGCCAAAGATT+CGG 0.439078 8.3:-41857030 None:intergenic
TGAAGAAATCAAGTCCATAT+TGG 0.439919 8.3:-41856564 None:intergenic
GGCCAAAGATTCGGTTGAAA+AGG 0.442677 8.3:-41857021 None:intergenic
AGAGGAGGTTAGTGCATGAT+AGG 0.446173 8.3:-41856699 None:intergenic
TGAAGCACGTCGTACAGAAA+AGG 0.458324 8.3:-41857531 None:intergenic
CTGTCCAATCTTAGAAACTT+TGG 0.459587 8.3:+41856992 MS.gene72958:CDS
CTTGGAGGAGAGTGAGTAAA+GGG 0.461485 8.3:-41857250 None:intergenic
AGTTGTAGTGTCTTCAATGA+TGG 0.466751 8.3:-41856921 None:intergenic
GCACTAACCTCCTCTCCATC+AGG 0.467643 8.3:+41856707 MS.gene72958:CDS
CAATGAGCCTTGTCTCTCAT+AGG 0.474674 8.3:+41856377 MS.gene72958:CDS
ATTATGAGAGCTTGAAGTAT+AGG 0.479156 8.3:-41857561 None:intergenic
ACGTGGATCCGCACCGCCGT+TGG 0.482549 8.3:+41856604 MS.gene72958:CDS
TCTCTATGGTGAAATATTTG+TGG 0.484639 8.3:+41856869 MS.gene72958:CDS
CTCGCTCTCTTCACGTCTGA+GGG 0.487168 8.3:+41856649 MS.gene72958:CDS
ATATCCTTTAAAGTGAATAT+AGG 0.491831 8.3:-41857756 None:intergenic
CATCGTAGAAATCAAAAGCT+TGG 0.492563 8.3:-41856423 None:intergenic
TCTCGCTCTCTTCACGTCTG+AGG 0.498144 8.3:+41856648 MS.gene72958:CDS
CAAAGTTTCTAAGATTGGAC+AGG 0.500334 8.3:-41856991 None:intergenic
ATGTGATATTGGTGAGGCTA+AGG 0.505330 8.3:-41857139 None:intergenic
TAACTTAGTCAAATTTAACT+TGG 0.510908 8.3:-41857943 None:intergenic
ATCCTCTAGGTGGGGCCCAA+CGG 0.512937 8.3:-41856620 None:intergenic
GAAGCACGTCGTACAGAAAA+GGG 0.514480 8.3:-41857530 None:intergenic
CGGAAGATGCGTCTTTCTTG+CGG 0.522752 8.3:+41856541 MS.gene72958:CDS
CTCTAGGTGGGGCCCAACGG+CGG 0.525268 8.3:-41856617 None:intergenic
AGGTTAGTGCATGATAGGAC+CGG 0.527359 8.3:-41856694 None:intergenic
CGGCTTCAAACTCCCTCTCC+CGG 0.528625 8.3:+41856675 MS.gene72958:CDS
GCTTGGAGGAGAGTGAGTAA+AGG 0.536107 8.3:-41857251 None:intergenic
AGATGTTTGTGTGGGGAGGA+AGG 0.540985 8.3:-41856347 None:intergenic
ACTGCTTAATCTGTCTGTGT+TGG 0.543571 8.3:-41856293 None:intergenic
TAAAGTGAATATAGGTCAAG+TGG 0.551062 8.3:-41857748 None:intergenic
CGCCGTTGGGCCCCACCTAG+AGG 0.559431 8.3:+41856618 MS.gene72958:CDS
AACAGATTCACTTTCAGAAG+AGG 0.560957 8.3:-41857225 None:intergenic
GTTTCGTTGTTATGCAGCAA+AGG 0.562730 8.3:+41857298 MS.gene72958:CDS
ACGCATCTTCCGAATGTCGC+GGG 0.569466 8.3:-41856530 None:intergenic
TTAAAGGATATATAGGACAT+TGG 0.572576 8.3:+41857768 MS.gene72958:CDS
ACAACTAGAAATTGGTAATG+TGG 0.572971 8.3:+41856938 MS.gene72958:CDS
GAAGAAGAAGACGATGGTCA+AGG 0.573718 8.3:+41856262 MS.gene72958:CDS
AGATTGGACAGGCAGAGAGA+AGG 0.579911 8.3:-41856980 None:intergenic
GGAAGATGGAACCCTAAGCT+TGG 0.579963 8.3:-41857042 None:intergenic
CTCTTCACGTCTGAGGGTGA+CGG 0.581747 8.3:+41856655 MS.gene72958:CDS
GTGCATGATAGGACCGGGAG+AGG 0.587136 8.3:-41856688 None:intergenic
TAATGCCAGAGAGAGCTTGG+AGG 0.588199 8.3:-41857265 None:intergenic
TTTGTTACCTGATGGAGAGG+AGG 0.590784 8.3:-41856714 None:intergenic
GGTGGGGCCCAACGGCGGTG+CGG 0.592704 8.3:-41856612 None:intergenic
TGTCTTGAGATTGACACACC+TGG 0.595030 8.3:+41857107 MS.gene72958:CDS
GAGCGAGATGAAGATCCTCT+AGG 0.596033 8.3:-41856633 None:intergenic
CGGCCTCTCTATCGCAATCG+GGG 0.599475 8.3:-41856453 None:intergenic
CGCGGGTACTTCGCATAGAG+AGG 0.601043 8.3:-41856513 None:intergenic
AGATTTGTTACCTGATGGAG+AGG 0.603999 8.3:-41856717 None:intergenic
GAGATGAAGATCCTCTAGGT+GGG 0.606924 8.3:-41856629 None:intergenic
TGCATGATAGGACCGGGAGA+GGG 0.607937 8.3:-41856687 None:intergenic
TGGCAGACAGTAGATCCCCT+TGG 0.612624 8.3:-41857923 None:intergenic
GGTTAGTGCATGATAGGACC+GGG 0.613486 8.3:-41856693 None:intergenic
CTGAACGCTCTGTTGACACG+TGG 0.616550 8.3:+41856587 MS.gene72958:CDS
AGTTCAAAACGAAGAAAACC+AGG 0.618933 8.3:+41856235 MS.gene72958:CDS
AGGCTAAGGTACTTGAGACC+AGG 0.622331 8.3:-41857125 None:intergenic
TACAGAAAAGGGTCGACAGT+GGG 0.624804 8.3:-41857519 None:intergenic
CGAGATGAAGATCCTCTAGG+TGG 0.630001 8.3:-41856630 None:intergenic
ACGAGTTAAATATAGTCTCA+CGG 0.631410 8.3:+41857691 MS.gene72958:CDS
GACTTTGCCATATTCGTCAG+CGG 0.631911 8.3:+41856487 MS.gene72958:CDS
AAAGTGAATATAGGTCAAGT+GGG 0.636598 8.3:-41857747 None:intergenic
AGATGAAGATCCTCTAGGTG+GGG 0.637705 8.3:-41856628 None:intergenic
GACGCATCTTCCGAATGTCG+CGG 0.645697 8.3:-41856531 None:intergenic
ACACAGATGTTTGTGTGGGG+AGG 0.652325 8.3:-41856351 None:intergenic
TTACCCCGATTGCGATAGAG+AGG 0.653960 8.3:+41856450 MS.gene72958:CDS
GTACACACAGATGTTTGTGT+GGG 0.661273 8.3:-41856355 None:intergenic
GGCAGAGAGAAGGATATCAA+CGG 0.662736 8.3:-41856970 None:intergenic
GTACAGAAAAGGGTCGACAG+TGG 0.663564 8.3:-41857520 None:intergenic
TGTACACACAGATGTTTGTG+TGG 0.665316 8.3:-41856356 None:intergenic
TATTGGGAACTTGCACAACG+TGG 0.670170 8.3:+41857178 MS.gene72958:CDS
GAAGATACCTATGAGAGACA+AGG 0.684686 8.3:-41856384 None:intergenic
TGGGAACTTGCACAACGTGG+AGG 0.687506 8.3:+41857181 MS.gene72958:CDS
GGAGGAGAAGAAGAAGACGA+TGG 0.687578 8.3:+41856256 MS.gene72958:CDS
TGCCAAATGTGATATTGGTG+AGG 0.688345 8.3:-41857145 None:intergenic
TCTCATAATTCATAATGACA+AGG 0.702264 8.3:+41857575 MS.gene72958:CDS
TACACACAGATGTTTGTGTG+GGG 0.739788 8.3:-41856354 None:intergenic
TCAAAACGAAGAAAACCAGG+AGG 0.776352 8.3:+41856238 MS.gene72958:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGTAAATTTAAAACTTTTCA+AGG - chr8.3:41857066-41857085 None:intergenic 15.0%
!!! ATTTTCGAAAAATCTATAAT+AGG - chr8.3:41857453-41857472 None:intergenic 15.0%
!! AAAAAGGTAAAGATTGAAAA+TGG - chr8.3:41856770-41856789 None:intergenic 20.0%
!! AATGGAATATATAATACACA+AGG - chr8.3:41857343-41857362 None:intergenic 20.0%
!! CAAATAATAACTGTACAAAA+AGG - chr8.3:41856786-41856805 None:intergenic 20.0%
!!! ATATCCTTTAAAGTGAATAT+AGG - chr8.3:41857759-41857778 None:intergenic 20.0%
!!! ATTCACTTTAAAGGATATAT+AGG + chr8.3:41857761-41857780 MS.gene72958:CDS 20.0%
!!! TGTGTTTTTGTTTGATTATT+TGG + chr8.3:41857636-41857655 MS.gene72958:intron 20.0%
! TACCAAAAGAAGAGATTATT+AGG + chr8.3:41857420-41857439 MS.gene72958:intron 25.0%
! TCTCATAATTCATAATGACA+AGG + chr8.3:41857575-41857594 MS.gene72958:CDS 25.0%
! TTAAAGGATATATAGGACAT+TGG + chr8.3:41857768-41857787 MS.gene72958:CDS 25.0%
! TTGACCTATATTCACTTTAA+AGG + chr8.3:41857752-41857771 MS.gene72958:CDS 25.0%
!! AAAATTTTCGAATATGCCAA+GGG + chr8.3:41857907-41857926 MS.gene72958:CDS 25.0%
!! TACCTAATAATCTCTTCTTT+TGG - chr8.3:41857425-41857444 None:intergenic 25.0%
!! TTTAACTTAAGCTTTAGTGT+GGG + chr8.3:41857611-41857630 MS.gene72958:intron 25.0%
!!! TTAAAACTTTTCAAGGAAGA+TGG - chr8.3:41857059-41857078 None:intergenic 25.0%
!!! TTTTTCGAAAATGCACTTTT+CGG + chr8.3:41857461-41857480 MS.gene72958:CDS 25.0%
AAAGTGAATATAGGTCAAGT+GGG - chr8.3:41857750-41857769 None:intergenic 30.0%
AAGACACTACAACTAGAAAT+TGG + chr8.3:41856930-41856949 MS.gene72958:CDS 30.0%
ACGAGTTAAATATAGTCTCA+CGG + chr8.3:41857691-41857710 MS.gene72958:CDS 30.0%
ATTATGAGAGCTTGAAGTAT+AGG - chr8.3:41857564-41857583 None:intergenic 30.0%
TAAAGTGAATATAGGTCAAG+TGG - chr8.3:41857751-41857770 None:intergenic 30.0%
TCTCTATGGTGAAATATTTG+TGG + chr8.3:41856869-41856888 MS.gene72958:CDS 30.0%
TGAAGAAATCAAGTCCATAT+TGG - chr8.3:41856567-41856586 None:intergenic 30.0%
TGGTGAAATATTTGTGGAAT+TGG + chr8.3:41856875-41856894 MS.gene72958:CDS 30.0%
TTGAAGACAATGCTTATTTC+TGG + chr8.3:41857836-41857855 MS.gene72958:CDS 30.0%
! AAATTTTCGAATATGCCAAG+GGG + chr8.3:41857908-41857927 MS.gene72958:CDS 30.0%
! AGACAATTAGGAACACTTTT+CGG - chr8.3:41857722-41857741 None:intergenic 30.0%
! GAAAATTTTCGAATATGCCA+AGG + chr8.3:41857906-41857925 MS.gene72958:CDS 30.0%
! GTTTAACTTAAGCTTTAGTG+TGG + chr8.3:41857610-41857629 MS.gene72958:intron 30.0%
!! ACAAAAGATTTGTTACCTGA+TGG - chr8.3:41856725-41856744 None:intergenic 30.0%
!! ACAACTAGAAATTGGTAATG+TGG + chr8.3:41856938-41856957 MS.gene72958:CDS 30.0%
!! AGTTCCAAAGTTTCTAAGAT+TGG - chr8.3:41856999-41857018 None:intergenic 30.0%
!! AGTTGTAATTTGTTTCCTAC+AGG + chr8.3:41857661-41857680 MS.gene72958:intron 30.0%
!!! GGCAAAGTCTTTGAAATTTT+CGG - chr8.3:41856476-41856495 None:intergenic 30.0%
AACAGATTCACTTTCAGAAG+AGG - chr8.3:41857228-41857247 None:intergenic 35.0%
AAGTGGGATACTAGACAATT+AGG - chr8.3:41857734-41857753 None:intergenic 35.0%
AGTTCAAAACGAAGAAAACC+AGG + chr8.3:41856235-41856254 MS.gene72958:CDS 35.0%
AGTTGTAGTGTCTTCAATGA+TGG - chr8.3:41856924-41856943 None:intergenic 35.0%
CATCGTAGAAATCAAAAGCT+TGG - chr8.3:41856426-41856445 None:intergenic 35.0%
CTGTCCAATCTTAGAAACTT+TGG + chr8.3:41856992-41857011 MS.gene72958:CDS 35.0%
TGCATTGCCAAATGTGATAT+TGG - chr8.3:41857153-41857172 None:intergenic 35.0%
TTGGCAATGCAACTTCTATT+GGG + chr8.3:41857162-41857181 MS.gene72958:CDS 35.0%
TTTGGCAATGCAACTTCTAT+TGG + chr8.3:41857161-41857180 MS.gene72958:CDS 35.0%
! GCTAGTTATGTTTTGCAGTA+TGG + chr8.3:41857806-41857825 MS.gene72958:CDS 35.0%
! TTCCTTTTCAACCGAATCTT+TGG + chr8.3:41857019-41857038 MS.gene72958:CDS 35.0%
!! CAAAGTTTCTAAGATTGGAC+AGG - chr8.3:41856994-41857013 None:intergenic 35.0%
ACTGCTTAATCTGTCTGTGT+TGG - chr8.3:41856296-41856315 None:intergenic 40.0%
AGCCTCACCAATATCACATT+TGG + chr8.3:41857143-41857162 MS.gene72958:CDS 40.0%
ATATGGCATAAGAGAGAGTC+TGG - chr8.3:41856322-41856341 None:intergenic 40.0%
ATGTGATATTGGTGAGGCTA+AGG - chr8.3:41857142-41857161 None:intergenic 40.0%
CTAATTCTCGTATCTCCACT+TGG + chr8.3:41857383-41857402 MS.gene72958:intron 40.0%
CTCATAGGTATCTTCATCTC+TGG + chr8.3:41856392-41856411 MS.gene72958:CDS 40.0%
GAAGATACCTATGAGAGACA+AGG - chr8.3:41856387-41856406 None:intergenic 40.0%
GTACACACAGATGTTTGTGT+GGG - chr8.3:41856358-41856377 None:intergenic 40.0%
GTTAACGTACACAGTCTCTA+TGG + chr8.3:41856855-41856874 MS.gene72958:intron 40.0%
GTTTCGTTGTTATGCAGCAA+AGG + chr8.3:41857298-41857317 MS.gene72958:CDS 40.0%
TAACTCGTGATGTATCCTGT+AGG - chr8.3:41857679-41857698 None:intergenic 40.0%
TACACACAGATGTTTGTGTG+GGG - chr8.3:41856357-41856376 None:intergenic 40.0%
TCAAAACGAAGAAAACCAGG+AGG + chr8.3:41856238-41856257 MS.gene72958:CDS 40.0%
TGCCAAATGTGATATTGGTG+AGG - chr8.3:41857148-41857167 None:intergenic 40.0%
TGTACACACAGATGTTTGTG+TGG - chr8.3:41856359-41856378 None:intergenic 40.0%
!! AGATTTGTTACCTGATGGAG+AGG - chr8.3:41856720-41856739 None:intergenic 40.0%
ACGTACACAACAACACCAAG+TGG - chr8.3:41857401-41857420 None:intergenic 45.0%
AGAGGAGGTTAGTGCATGAT+AGG - chr8.3:41856702-41856721 None:intergenic 45.0%
AGATGAAGATCCTCTAGGTG+GGG - chr8.3:41856631-41856650 None:intergenic 45.0%
AGGTTAGTGCATGATAGGAC+CGG - chr8.3:41856697-41856716 None:intergenic 45.0%
CCTAAGCTTGGCCAAAGATT+CGG - chr8.3:41857033-41857052 None:intergenic 45.0%
CGAATCTTTGGCCAAGCTTA+GGG + chr8.3:41857031-41857050 MS.gene72958:CDS 45.0%
CTTGGAGGAGAGTGAGTAAA+GGG - chr8.3:41857253-41857272 None:intergenic 45.0%
GAAGAAGAAGACGATGGTCA+AGG + chr8.3:41856262-41856281 MS.gene72958:CDS 45.0%
GAAGCACGTCGTACAGAAAA+GGG - chr8.3:41857533-41857552 None:intergenic 45.0%
GACTTTGCCATATTCGTCAG+CGG + chr8.3:41856487-41856506 MS.gene72958:CDS 45.0%
GAGATGAAGATCCTCTAGGT+GGG - chr8.3:41856632-41856651 None:intergenic 45.0%
GGCAGAGAGAAGGATATCAA+CGG - chr8.3:41856973-41856992 None:intergenic 45.0%
GTTTAATGCCAGAGAGAGCT+TGG - chr8.3:41857271-41857290 None:intergenic 45.0%
TACAGAAAAGGGTCGACAGT+GGG - chr8.3:41857522-41857541 None:intergenic 45.0%
TATTGGGAACTTGCACAACG+TGG + chr8.3:41857178-41857197 MS.gene72958:CDS 45.0%
TGAAGCACGTCGTACAGAAA+AGG - chr8.3:41857534-41857553 None:intergenic 45.0%
TGTCTTGAGATTGACACACC+TGG + chr8.3:41857107-41857126 MS.gene72958:CDS 45.0%
TTTGTTACCTGATGGAGAGG+AGG - chr8.3:41856717-41856736 None:intergenic 45.0%
! CAATGAGCCTTGTCTCTCAT+AGG + chr8.3:41856377-41856396 MS.gene72958:CDS 45.0%
! GGCCAAAGATTCGGTTGAAA+AGG - chr8.3:41857024-41857043 None:intergenic 45.0%
! TGGGGAGGAAGGAAAGTATA+TGG - chr8.3:41856339-41856358 None:intergenic 45.0%
!!! CAAATTTTTTAAATATATAA+TGG - chr8.3:41857361-41857380 None:intergenic 5.0%
ACACAGATGTTTGTGTGGGG+AGG - chr8.3:41856354-41856373 None:intergenic 50.0%
AGATGTTTGTGTGGGGAGGA+AGG - chr8.3:41856350-41856369 None:intergenic 50.0%
AGATTGGACAGGCAGAGAGA+AGG - chr8.3:41856983-41857002 None:intergenic 50.0%
CCGAATCTTTGGCCAAGCTT+AGG + chr8.3:41857030-41857049 MS.gene72958:CDS 50.0%
CGAGATGAAGATCCTCTAGG+TGG - chr8.3:41856633-41856652 None:intergenic 50.0%
CGGAAGATGCGTCTTTCTTG+CGG + chr8.3:41856541-41856560 MS.gene72958:CDS 50.0%
CGTCTTTCTTGCGGCCAATA+TGG + chr8.3:41856550-41856569 MS.gene72958:CDS 50.0%
GAGCGAGATGAAGATCCTCT+AGG - chr8.3:41856636-41856655 None:intergenic 50.0%
GCTTGGAGGAGAGTGAGTAA+AGG - chr8.3:41857254-41857273 None:intergenic 50.0%
GGAAGATGGAACCCTAAGCT+TGG - chr8.3:41857045-41857064 None:intergenic 50.0%
GGAGGAGAAGAAGAAGACGA+TGG + chr8.3:41856256-41856275 MS.gene72958:CDS 50.0%
GGTTAGTGCATGATAGGACC+GGG - chr8.3:41856696-41856715 None:intergenic 50.0%
GTACAGAAAAGGGTCGACAG+TGG - chr8.3:41857523-41857542 None:intergenic 50.0%
TAATGCCAGAGAGAGCTTGG+AGG - chr8.3:41857268-41857287 None:intergenic 50.0%
TCGTCTTCTTCTTCTCCTCC+TGG - chr8.3:41856256-41856275 None:intergenic 50.0%
TTACCCCGATTGCGATAGAG+AGG + chr8.3:41856450-41856469 MS.gene72958:CDS 50.0%
TTCGGCCTCTCTATCGCAAT+CGG - chr8.3:41856458-41856477 None:intergenic 50.0%
! AGGCTAAGGTACTTGAGACC+AGG - chr8.3:41857128-41857147 None:intergenic 50.0%
ACGCATCTTCCGAATGTCGC+GGG - chr8.3:41856533-41856552 None:intergenic 55.0%
ACTCTCCTCCAAGCTCTCTC+TGG + chr8.3:41857260-41857279 MS.gene72958:CDS 55.0%
CTCGCTCTCTTCACGTCTGA+GGG + chr8.3:41856649-41856668 MS.gene72958:CDS 55.0%
CTCTTCACGTCTGAGGGTGA+CGG + chr8.3:41856655-41856674 MS.gene72958:CDS 55.0%
CTGAACGCTCTGTTGACACG+TGG + chr8.3:41856587-41856606 MS.gene72958:CDS 55.0%
GACGCATCTTCCGAATGTCG+CGG - chr8.3:41856534-41856553 None:intergenic 55.0%
GCACTAACCTCCTCTCCATC+AGG + chr8.3:41856707-41856726 MS.gene72958:CDS 55.0%
TCGGCCTCTCTATCGCAATC+GGG - chr8.3:41856457-41856476 None:intergenic 55.0%
TCTCGCTCTCTTCACGTCTG+AGG + chr8.3:41856648-41856667 MS.gene72958:CDS 55.0%
TGCATGATAGGACCGGGAGA+GGG - chr8.3:41856690-41856709 None:intergenic 55.0%
TGGCAGACAGTAGATCCCCT+TGG - chr8.3:41857926-41857945 None:intergenic 55.0%
TGGGAACTTGCACAACGTGG+AGG + chr8.3:41857181-41857200 MS.gene72958:CDS 55.0%
! TGCGAAGTACCCGCGACATT+CGG + chr8.3:41856521-41856540 MS.gene72958:CDS 55.0%
ATCCTCTAGGTGGGGCCCAA+CGG - chr8.3:41856623-41856642 None:intergenic 60.0%
CGCGGGTACTTCGCATAGAG+AGG - chr8.3:41856516-41856535 None:intergenic 60.0%
CGGCCTCTCTATCGCAATCG+GGG - chr8.3:41856456-41856475 None:intergenic 60.0%
CGGCTTCAAACTCCCTCTCC+CGG + chr8.3:41856675-41856694 MS.gene72958:CDS 60.0%
GAGGACGCCGCTGACGAATA+TGG - chr8.3:41856497-41856516 None:intergenic 60.0%
GTGCATGATAGGACCGGGAG+AGG - chr8.3:41856691-41856710 None:intergenic 60.0%
ACGTGGATCCGCACCGCCGT+TGG + chr8.3:41856604-41856623 MS.gene72958:CDS 70.0%
CGTGGATCCGCACCGCCGTT+GGG + chr8.3:41856605-41856624 MS.gene72958:CDS 70.0%
CTCTAGGTGGGGCCCAACGG+CGG - chr8.3:41856620-41856639 None:intergenic 70.0%
CGCCGTTGGGCCCCACCTAG+AGG + chr8.3:41856618-41856637 MS.gene72958:CDS 75.0%
! GGTGGGGCCCAACGGCGGTG+CGG - chr8.3:41856615-41856634 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 41856226 41857961 41856226 ID=MS.gene72958
chr8.3 mRNA 41856226 41857961 41856226 ID=MS.gene72958.t1;Parent=MS.gene72958
chr8.3 exon 41856226 41856728 41856226 ID=MS.gene72958.t1.exon1;Parent=MS.gene72958.t1
chr8.3 CDS 41856226 41856728 41856226 ID=cds.MS.gene72958.t1;Parent=MS.gene72958.t1
chr8.3 exon 41856869 41857319 41856869 ID=MS.gene72958.t1.exon2;Parent=MS.gene72958.t1
chr8.3 CDS 41856869 41857319 41856869 ID=cds.MS.gene72958.t1;Parent=MS.gene72958.t1
chr8.3 exon 41857429 41857596 41857429 ID=MS.gene72958.t1.exon3;Parent=MS.gene72958.t1
chr8.3 CDS 41857429 41857596 41857429 ID=cds.MS.gene72958.t1;Parent=MS.gene72958.t1
chr8.3 exon 41857683 41857961 41857683 ID=MS.gene72958.t1.exon4;Parent=MS.gene72958.t1
chr8.3 CDS 41857683 41857961 41857683 ID=cds.MS.gene72958.t1;Parent=MS.gene72958.t1
Gene Sequence

>MS.gene72958

ATGGAGGAAAGTTCAAAACGAAGAAAACCAGGAGGAGAAGAAGAAGACGATGGTCAAGGCAGTAACACCAACACAGACAGATTAAGCAGTCTGCCAGACTCTCTCTTATGCCATATACTTTCCTTCCTCCCCACACAAACATCTGTGTGTACAATGAGCCTTGTCTCTCATAGGTATCTTCATCTCTGGAAACATCTCCAAGCTTTTGATTTCTACGATGTGTATTACCCCGATTGCGATAGAGAGGCCGAAAATTTCAAAGACTTTGCCATATTCGTCAGCGGCGTCCTCTCTATGCGAAGTACCCGCGACATTCGGAAGATGCGTCTTTCTTGCGGCCAATATGGACTTGATTTCTTCACTGAACGCTCTGTTGACACGTGGATCCGCACCGCCGTTGGGCCCCACCTAGAGGATCTTCATCTCGCTCTCTTCACGTCTGAGGGTGACGGCTTCAAACTCCCTCTCCCGGTCCTATCATGCACTAACCTCCTCTCCATCAGGTAACAAATCTTTTGTCAAACAATCTTCTATTTACATGCCATTTTCAATCTTTACCTTTTTGTACAGTTATTATTTGCACAGTTATTCTTGTTTAAATTAAAATGTGACATAATAAATGAAGATTTGTTAACGTACACAGTCTCTATGGTGAAATATTTGTGGAATTGGAACAATCTTCGCGTGTTTGTTTACCATCATTGAAGACACTACAACTAGAAATTGGTAATGTGGATGTGAATTCCGTTGATATCCTTCTCTCTGCCTGTCCAATCTTAGAAACTTTGGAACTTTCCTTTTCAACCGAATCTTTGGCCAAGCTTAGGGTTCCATCTTCCTTGAAAAGTTTTAAATTTACTATAGAGAATGACACTGAAGTTTGTCTTGAGATTGACACACCTGGTCTCAAGTACCTTAGCCTCACCAATATCACATTTGGCAATGCAACTTCTATTGGGAACTTGCACAACGTGGAGGAAGCATATCTTGATGTACTCTCCTCTTCTGAAAGTGAATCTGTTGACCCTTTACTCACTCTCCTCCAAGCTCTCTCTGGCATTAAACGTCTAGTGTTTCGTTGTTATGCAGCAAAGGTGAGTGAAATTTTCATTATCCTTGTGTATTATATATTCCATTATATATTTAAAAAATTTGTGCTAATTCTCGTATCTCCACTTGGTGTTGTTGTGTACGTACCAAAAGAAGAGATTATTAGGTACTGAACCTATTATAGATTTTTCGAAAATGCACTTTTCGGAATTTCGCTGTTTACTACATCTAGAGCTCATTTTTCCCACTGTCGACCCTTTTCTGTACGACGTGCTTCAGAAATGTCCTATACTTCAAGCTCTCATAATTCATAATGACAAGGTTCGTAAATAGAGTTTAACTTAAGCTTTAGTGTGGGTGTGTGTTTTTGTTTGATTATTTGGTGAGTTGTAATTTGTTTCCTACAGGATACATCACGAGTTAAATATAGTCTCACGGAAAAGCCGAAAAGTGTTCCTAATTGTCTAGTATCCCACTTGACCTATATTCACTTTAAAGGATATATAGGACATTGGCATGAGAAAGAATTTGCTAGTTATGTTTTGCAGTATGGACTTGTTTTGAAGACAATGCTTATTTCTGGTTTTTTGTCGAATGAAACGAAGAAGCATGCTAAGTACAACTATCGCAGAAAATTTTCGAATATGCCAAGGGGATCTACTGTCTGCCAAGTTAAATTTGACTAA

Protein sequence

>MS.gene72958.t1

MEESSKRRKPGGEEEDDGQGSNTNTDRLSSLPDSLLCHILSFLPTQTSVCTMSLVSHRYLHLWKHLQAFDFYDVYYPDCDREAENFKDFAIFVSGVLSMRSTRDIRKMRLSCGQYGLDFFTERSVDTWIRTAVGPHLEDLHLALFTSEGDGFKLPLPVLSCTNLLSISLYGEIFVELEQSSRVCLPSLKTLQLEIGNVDVNSVDILLSACPILETLELSFSTESLAKLRVPSSLKSFKFTIENDTEVCLEIDTPGLKYLSLTNITFGNATSIGNLHNVEEAYLDVLSSSESESVDPLLTLLQALSGIKRLVFRCYAAKKRLLGTEPIIDFSKMHFSEFRCLLHLELIFPTVDPFLYDVLQKCPILQALIIHNDKDTSRVKYSLTEKPKSVPNCLVSHLTYIHFKGYIGHWHEKEFASYVLQYGLVLKTMLISGFLSNETKKHAKYNYRRKFSNMPRGSTVCQVKFD