AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene34738


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34738.t1 MTR_8g058965 59.341 455 164 3 9 442 3 457 9.48e-176 500
MS.gene34738.t1 MTR_8g469020 57.743 452 167 4 18 446 6 456 5.56e-175 498
MS.gene34738.t1 MTR_8g070950 59.179 463 148 12 1 446 1 439 2.96e-165 473
MS.gene34738.t1 MTR_8g062010 56.629 445 169 8 6 441 1 430 2.68e-157 452
MS.gene34738.t1 MTR_8g062310 57.968 433 153 10 19 446 25 433 3.82e-156 449
MS.gene34738.t1 MTR_4g050250 58.111 413 141 7 7 387 8 420 8.55e-155 445
MS.gene34738.t1 MTR_8g062080 53.057 458 185 12 1 441 1 445 8.95e-148 428
MS.gene34738.t1 MTR_8g062300 50.507 493 184 14 1 445 1 481 5.48e-140 410
MS.gene34738.t1 MTR_8g467790 48.477 394 158 10 19 401 148 507 2.26e-104 320
MS.gene34738.t1 MTR_2g083840 45.415 458 232 10 1 441 1 457 7.80e-104 317
MS.gene34738.t1 MTR_8g468810 41.915 470 237 14 1 441 1 463 1.62e-94 293
MS.gene34738.t1 MTR_8g058970 40.833 480 242 13 1 441 1 477 2.51e-91 285
MS.gene34738.t1 MTR_8g062270 41.741 448 231 11 16 440 13 453 3.69e-91 284
MS.gene34738.t1 MTR_8g014260 40.948 464 240 15 1 442 1 452 8.39e-91 283
MS.gene34738.t1 MTR_8g467800 42.004 469 235 12 2 446 3 458 5.35e-88 276
MS.gene34738.t1 MTR_5g092960 39.514 453 243 10 14 440 14 461 4.28e-79 253
MS.gene34738.t1 MTR_8g468840 42.141 439 232 8 19 439 14 448 1.94e-78 251
MS.gene34738.t1 MTR_4g032730 37.821 468 249 11 11 440 3 466 6.07e-78 250
MS.gene34738.t1 MTR_8g468760 40.487 452 211 12 12 440 2 418 4.69e-74 238
MS.gene34738.t1 MTR_8g014160 39.908 436 198 14 19 441 41 425 1.57e-73 237
MS.gene34738.t1 MTR_8g445780 40.399 401 211 12 7 394 5 390 2.39e-71 231
MS.gene34738.t1 MTR_8g468810 41.867 375 190 12 1 351 1 371 1.58e-69 225
MS.gene34738.t1 MTR_8g077460 36.530 438 205 15 12 441 3 375 3.99e-62 206
MS.gene34738.t1 MTR_8g468810 43.279 305 147 10 1 285 1 299 3.59e-59 197
MS.gene34738.t1 MTR_8g468810 43.279 305 147 10 1 285 1 299 4.16e-59 197
MS.gene34738.t1 MTR_8g468810 43.279 305 147 10 1 285 1 299 1.00e-58 196
MS.gene34738.t1 MTR_2g086020 69.178 146 45 0 301 446 175 320 2.78e-57 192
MS.gene34738.t1 MTR_2g086020 49.333 150 62 3 45 189 2 142 2.51e-30 120
MS.gene34738.t1 MTR_5g092960 38.172 372 205 9 3 351 2 371 1.83e-54 187
MS.gene34738.t1 MTR_8g467800 43.522 301 143 9 2 285 3 293 7.14e-47 165
MS.gene34738.t1 MTR_4g024710 39.796 294 161 9 160 441 58 347 2.17e-46 164
MS.gene34738.t1 MTR_8g014210 40.254 236 128 6 214 441 1 231 5.32e-40 143
MS.gene34738.t1 MTR_1g041245 29.478 441 230 17 18 441 10 386 1.33e-34 133
MS.gene34738.t1 MTR_4g024745 37.276 279 159 10 158 424 10 284 8.71e-34 128
MS.gene34738.t1 MTR_5g021550 44.512 164 84 4 1 159 1 162 1.69e-33 124
MS.gene34738.t1 MTR_7g056433 27.650 434 253 13 16 441 9 389 8.71e-30 120
MS.gene34738.t1 MTR_5g080710 31.126 453 255 21 9 433 26 449 2.93e-29 119
MS.gene34738.t1 MTR_8g014290 43.709 151 76 4 19 160 10 160 8.94e-29 111
MS.gene34738.t1 MTR_5g084070 27.578 446 277 14 7 434 3 420 8.86e-28 115
MS.gene34738.t1 MTR_5g008950 26.424 439 239 15 21 445 1 369 7.77e-27 111
MS.gene34738.t1 MTR_7g034115 28.571 434 232 16 18 437 10 379 9.20e-27 111
MS.gene34738.t1 MTR_7g115270 26.742 445 260 12 11 438 4 399 2.26e-26 110
MS.gene34738.t1 MTR_5g008920 26.846 447 246 16 9 441 2 381 6.01e-26 108
MS.gene34738.t1 MTR_2g007450 28.846 468 254 19 6 441 1 421 9.99e-26 108
MS.gene34738.t1 MTR_7g033915 27.765 443 214 16 17 440 9 364 5.70e-25 105
MS.gene34738.t1 MTR_3g099800 64.198 81 28 1 353 432 19 99 1.11e-24 98.2
MS.gene34738.t1 MTR_7g026500 27.640 445 255 17 13 444 8 398 4.19e-24 103
MS.gene34738.t1 MTR_4g024720 40.659 182 85 6 1 162 1 179 1.10e-23 98.6
MS.gene34738.t1 MTR_5g073420 27.384 409 217 14 17 413 9 349 3.54e-23 100
MS.gene34738.t1 MTR_3g023630 26.977 430 232 15 17 433 6 366 1.03e-22 99.8
MS.gene34738.t1 MTR_7g007080 28.731 449 224 20 19 442 4 381 7.55e-21 94.4
MS.gene34738.t1 MTR_2g036470 27.033 455 252 16 6 440 1 395 1.04e-20 94.0
MS.gene34738.t1 MTR_3g071850 27.123 424 254 12 19 433 24 401 1.11e-20 95.5
MS.gene34738.t1 MTR_4g056040 27.669 459 252 19 12 410 5 443 1.20e-20 94.7
MS.gene34738.t1 MTR_7g056430 26.478 423 229 14 19 433 9 357 1.38e-20 95.5
MS.gene34738.t1 MTR_7g056420 26.478 423 229 14 19 433 9 357 1.48e-20 95.5
MS.gene34738.t1 MTR_6g022500 24.832 447 255 15 12 441 94 476 1.79e-20 94.0
MS.gene34738.t1 MTR_1g085120 26.376 436 252 13 19 441 92 471 1.86e-20 94.0
MS.gene34738.t1 MTR_5g058100 26.136 440 256 13 12 440 2 383 2.58e-20 92.8
MS.gene34738.t1 MTR_7g098480 27.594 453 250 16 1 440 1 388 2.66e-20 93.6
MS.gene34738.t1 MTR_1g085120 26.376 436 252 13 19 441 167 546 2.78e-20 94.0
MS.gene34738.t1 MTR_3g036250 25.058 431 246 12 16 438 2 363 3.19e-20 92.0
MS.gene34738.t1 MTR_3g108560 26.622 447 235 15 12 440 17 388 3.79e-20 92.4
MS.gene34738.t1 MTR_1g108820 27.231 437 252 17 13 438 2 383 4.29e-20 92.0
MS.gene34738.t1 MTR_3g107100 26.949 449 251 18 14 441 6 398 2.17e-19 90.1
MS.gene34738.t1 MTR_7g055943 26.068 468 249 20 2 441 23 421 7.12e-19 89.0
MS.gene34738.t1 MTR_7g032380 35.052 194 106 7 19 205 11 191 8.91e-19 87.8
MS.gene34738.t1 MTR_7g032380 29.379 177 105 5 279 441 186 356 1.75e-11 65.9
MS.gene34738.t1 MTR_8g014220 33.333 207 85 5 1 201 1 160 1.03e-18 83.6
MS.gene34738.t1 MTR_7g088260 26.281 449 254 15 6 441 78 462 1.32e-18 88.2
MS.gene34738.t1 MTR_4g098590 26.471 408 226 16 21 408 1 354 1.60e-18 87.4
MS.gene34738.t1 MTR_2g008320 25.727 447 243 14 17 442 50 428 2.14e-18 87.4
MS.gene34738.t1 MTR_1g038710 28.472 432 260 15 19 416 19 435 2.18e-18 87.4
MS.gene34738.t1 MTR_6g022360 26.862 443 223 17 14 431 38 404 2.59e-18 87.0
MS.gene34738.t1 MTR_4g056030 35.922 206 107 7 12 207 5 195 6.75e-18 86.3
MS.gene34738.t1 MTR_7g056447 33.854 192 107 5 19 204 9 186 9.40e-18 84.0
MS.gene34738.t1 MTR_4g056070 33.750 240 102 10 12 205 5 233 1.03e-17 85.5
MS.gene34738.t1 MTR_2g007500 30.542 203 116 5 8 205 3 185 1.41e-17 84.0
MS.gene34738.t1 MTR_6g045333 25.513 439 256 16 19 440 61 445 1.68e-17 84.7
MS.gene34738.t1 MTR_5g083890 26.555 418 236 13 19 411 6 377 1.81e-17 85.1
MS.gene34738.t1 MTR_8g085430 33.654 208 113 8 11 205 3 198 3.70e-17 82.8
MS.gene34738.t1 MTR_3g107120 35.784 204 106 11 19 206 9 203 5.57e-17 82.8
MS.gene34738.t1 MTR_4g056020 27.451 459 269 18 12 435 5 434 1.70e-16 81.6
MS.gene34738.t1 MTR_8g014230 49.367 79 38 2 351 429 17 93 2.91e-16 74.7
MS.gene34738.t1 MTR_4g113810 39.844 128 68 3 108 229 11 135 3.35e-16 76.6
MS.gene34738.t1 MTR_2g008310 25.581 430 255 13 19 442 2 372 5.62e-16 79.7
MS.gene34738.t1 MTR_2g082880 27.924 419 258 14 16 411 7 404 6.96e-16 79.7
MS.gene34738.t1 MTR_6g011460 26.742 445 246 19 15 441 39 421 1.45e-15 79.0
MS.gene34738.t1 MTR_7g033990 34.694 196 111 8 19 207 11 196 1.55e-15 78.6
MS.gene34738.t1 MTR_2g007400 25.835 449 252 13 19 442 12 404 1.76e-15 78.6
MS.gene34738.t1 MTR_2g082800 32.298 161 100 3 1 161 9 160 1.96e-15 78.2
MS.gene34738.t1 MTR_4g055990 32.365 241 107 10 12 208 5 233 2.18e-15 78.6
MS.gene34738.t1 MTR_4g055990 32.773 238 104 10 12 205 5 230 3.37e-15 78.2
MS.gene34738.t1 MTR_7g034110 34.184 196 107 7 19 205 11 193 4.07e-15 76.6
MS.gene34738.t1 MTR_1g014450 26.879 439 262 20 18 428 15 422 4.44e-15 77.4
MS.gene34738.t1 MTR_4g080590 26.005 423 262 15 16 409 20 420 5.74e-15 77.0
MS.gene34738.t1 MTR_3g108150 31.771 192 112 7 19 206 13 189 6.05e-15 76.6
MS.gene34738.t1 MTR_4g093690 32.270 282 133 16 19 278 18 263 8.42e-15 74.7
MS.gene34738.t1 MTR_3g040700 24.831 443 231 15 18 435 42 407 1.07e-14 76.3
MS.gene34738.t1 MTR_3g107160 25.676 444 247 17 16 442 7 384 1.35e-14 75.5
MS.gene34738.t1 MTR_7g032370 33.149 181 102 7 31 205 2 169 1.48e-14 75.1
MS.gene34738.t1 MTR_4g092430 34.810 158 88 6 7 161 29 174 2.05e-14 75.5
MS.gene34738.t1 MTR_4g092430 34.810 158 88 6 7 161 29 174 2.19e-14 75.5
MS.gene34738.t1 MTR_2g005990 25.934 455 238 17 17 438 4 392 3.07e-14 74.3
MS.gene34738.t1 MTR_7g098570 30.476 210 131 6 1 206 2 200 4.29e-14 74.3
MS.gene34738.t1 MTR_2g082850 34.161 161 99 4 6 163 9 165 5.24e-14 73.6
MS.gene34738.t1 MTR_7g094030 24.107 448 239 19 17 406 26 430 6.56e-14 73.9
MS.gene34738.t1 MTR_7g114710 25.688 436 227 19 19 441 13 364 7.75e-14 73.2
MS.gene34738.t1 MTR_1g053025 26.018 442 248 17 19 438 2 386 1.44e-13 72.4
MS.gene34738.t1 MTR_4g134150 31.250 240 133 11 19 248 14 231 1.65e-13 70.1
MS.gene34738.t1 MTR_7g033945 34.463 177 95 7 17 185 9 172 2.01e-13 68.9
MS.gene34738.t1 MTR_2g099980 30.208 192 124 5 1 190 20 203 2.06e-13 72.0
MS.gene34738.t1 MTR_7g034090 29.697 165 102 3 17 176 2 157 2.79e-13 71.6
MS.gene34738.t1 MTR_3g108560 32.000 200 106 7 12 205 17 192 3.48e-13 70.5
MS.gene34738.t1 MTR_7g033940 35.374 147 83 6 4 146 76 214 7.17e-13 68.2
MS.gene34738.t1 MTR_7g098510 28.302 212 130 6 1 205 1 197 9.56e-13 70.1
MS.gene34738.t1 MTR_7g098510 33.582 134 85 1 312 441 258 391 4.74e-12 67.8
MS.gene34738.t1 MTR_0049s0110 31.579 209 126 9 13 215 2 199 1.33e-12 68.2
MS.gene34738.t1 MTR_3g099830 23.649 444 245 16 12 438 5 371 1.38e-12 69.3
MS.gene34738.t1 MTR_4g024770 47.761 67 33 1 1 67 8 72 1.54e-12 63.2
MS.gene34738.t1 MTR_4g090940 30.675 163 98 6 1 161 141 290 1.66e-12 69.7
MS.gene34738.t1 MTR_3g048290 27.143 210 146 4 1 207 5 210 2.05e-12 69.3
MS.gene34738.t1 MTR_3g082890 32.394 213 119 9 4 207 2 198 2.65e-12 68.9
MS.gene34738.t1 MTR_3g082890 32.558 215 120 9 2 207 80 278 3.33e-12 68.6
MS.gene34738.t1 MTR_3g105060 26.174 447 219 23 19 441 14 373 3.60e-12 68.2
MS.gene34738.t1 MTR_0049s0110 31.579 209 126 9 13 215 2 199 3.61e-12 67.8
MS.gene34738.t1 MTR_0049s0110 31.579 209 126 9 13 215 2 199 3.62e-12 68.2
MS.gene34738.t1 MTR_0049s0110 31.579 209 126 9 13 215 2 199 3.65e-12 67.8
MS.gene34738.t1 MTR_2g072530 24.138 464 279 19 19 440 13 445 8.84e-12 67.0
MS.gene34738.t1 MTR_3g023470 33.548 155 84 6 8 159 4 142 1.12e-11 66.6
MS.gene34738.t1 MTR_8g014180 51.667 60 27 1 1 60 1 58 1.37e-11 60.1
MS.gene34738.t1 MTR_3g115430 41.333 75 41 1 367 441 54 125 1.43e-11 62.0
MS.gene34738.t1 MTR_7g007340 31.373 204 104 9 9 208 3 174 1.45e-11 66.2
MS.gene34738.t1 MTR_1g090900 33.333 180 108 6 13 191 5 173 3.02e-11 63.2
MS.gene34738.t1 MTR_5g045170 28.866 194 109 5 24 205 19 195 3.20e-11 65.1
MS.gene34738.t1 MTR_2g082780 32.164 171 102 6 24 192 17 175 3.28e-11 63.2
MS.gene34738.t1 MTR_5g087940 30.837 227 125 9 8 219 15 224 3.78e-11 65.1
MS.gene34738.t1 MTR_0492s0020 30.052 193 113 7 17 205 84 258 4.11e-11 65.1
MS.gene34738.t1 MTR_0543s0010 30.052 193 113 7 17 205 84 258 4.40e-11 65.1
MS.gene34738.t1 MTR_1g085120 26.460 291 177 10 19 285 179 456 5.46e-11 64.7
MS.gene34738.t1 MTR_1g094760 33.333 156 91 6 7 161 14 157 7.30e-11 64.7
MS.gene34738.t1 MTR_4g045680 39.326 89 48 2 6 94 3 85 7.84e-11 63.9
MS.gene34738.t1 MTR_3g110010 32.984 191 110 8 19 205 13 189 9.02e-11 64.7
MS.gene34738.t1 MTR_3g109982 32.812 192 111 8 19 206 13 190 9.03e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34738.t1 AT4G26340 29.360 453 255 17 19 441 2 419 5.71e-27 112
MS.gene34738.t1 AT5G56420 26.923 442 279 13 19 441 6 422 4.32e-25 107
MS.gene34738.t1 AT5G56420 26.923 442 279 13 19 441 6 422 4.32e-25 107
MS.gene34738.t1 AT5G56420 26.923 442 279 13 19 441 6 422 4.32e-25 107
MS.gene34738.t1 AT1G16930 26.160 474 274 17 12 441 8 449 2.56e-24 105
MS.gene34738.t1 AT1G16930 26.160 474 274 17 12 441 8 449 2.56e-24 105
MS.gene34738.t1 AT1G16930 26.160 474 274 17 12 441 8 449 2.56e-24 105
MS.gene34738.t1 AT4G10400 27.664 441 266 14 19 440 2 408 6.38e-24 103
MS.gene34738.t1 AT4G10400 27.664 441 266 14 19 440 2 408 6.38e-24 103
MS.gene34738.t1 AT4G10400 27.664 441 266 14 19 440 2 408 6.38e-24 103
MS.gene34738.t1 AT3G42770 28.406 433 274 10 21 433 1 417 9.16e-24 104
MS.gene34738.t1 AT5G53840 28.381 451 257 21 21 438 20 437 2.34e-22 99.4
MS.gene34738.t1 AT5G22730 27.948 458 274 21 17 438 26 463 2.46e-22 99.8
MS.gene34738.t1 AT5G22730 27.948 458 274 21 17 438 26 463 2.46e-22 99.8
MS.gene34738.t1 AT5G56560 28.125 448 259 18 21 441 7 418 4.84e-22 98.2
MS.gene34738.t1 AT1G32375 28.825 451 263 21 19 441 2 422 3.62e-21 95.5
MS.gene34738.t1 AT1G32375 28.825 451 263 21 19 441 2 422 3.62e-21 95.5
MS.gene34738.t1 AT5G22720 24.694 490 297 17 1 442 1 466 3.65e-21 96.3
MS.gene34738.t1 AT1G06630 28.889 360 213 14 19 351 12 355 4.91e-21 94.4
MS.gene34738.t1 AT1G06630 28.889 360 213 14 19 351 12 355 4.91e-21 94.4
MS.gene34738.t1 AT5G56370 25.785 446 280 13 19 440 2 420 5.42e-21 95.1
MS.gene34738.t1 AT5G56370 25.785 446 280 13 19 440 2 420 5.42e-21 95.1
MS.gene34738.t1 AT1G06630 28.852 357 211 14 19 348 12 352 1.14e-20 94.0
MS.gene34738.t1 AT1G06630 28.852 357 211 14 19 348 12 352 1.14e-20 94.0
MS.gene34738.t1 AT1G06630 28.852 357 211 14 19 348 12 352 1.14e-20 94.0
MS.gene34738.t1 AT1G06630 28.852 357 211 14 19 348 12 352 1.14e-20 94.0
MS.gene34738.t1 AT1G06630 28.852 357 211 14 19 348 21 361 1.41e-20 94.0
MS.gene34738.t1 AT1G06630 28.852 357 211 14 19 348 12 352 2.25e-20 94.0
MS.gene34738.t1 AT1G06630 29.963 267 162 9 19 268 12 270 6.41e-20 90.5
MS.gene34738.t1 AT1G66290 28.634 454 264 21 16 438 26 450 1.12e-19 91.7
MS.gene34738.t1 AT1G66310 25.974 462 283 15 7 438 7 439 1.70e-19 90.9
MS.gene34738.t1 AT4G09920 35.829 187 108 7 24 207 7 184 2.29e-19 88.6
MS.gene34738.t1 AT4G09920 35.829 187 108 7 24 207 7 184 2.29e-19 88.6
MS.gene34738.t1 AT4G09920 35.829 187 108 7 24 207 7 184 2.29e-19 88.6
MS.gene34738.t1 AT1G69630 32.821 195 119 4 16 207 15 200 2.84e-19 90.1
MS.gene34738.t1 AT4G09920 35.829 187 108 7 24 207 7 184 3.16e-19 88.6
MS.gene34738.t1 AT4G09920 35.829 187 108 7 24 207 7 184 3.16e-19 88.6
MS.gene34738.t1 AT5G44950 26.316 456 280 17 17 438 2 435 5.45e-19 89.4
MS.gene34738.t1 AT3G60040 27.737 411 230 16 19 390 13 395 1.62e-18 88.6
MS.gene34738.t1 AT5G60610 27.427 412 244 16 19 405 2 383 2.11e-18 87.0
MS.gene34738.t1 AT5G60610 27.427 412 244 16 19 405 2 383 2.11e-18 87.0
MS.gene34738.t1 AT3G60040 27.737 411 230 16 19 390 232 614 2.80e-18 88.2
MS.gene34738.t1 AT3G60040 27.737 411 230 16 19 390 233 615 2.93e-18 88.2
MS.gene34738.t1 AT3G60040 27.737 411 230 16 19 390 230 612 3.02e-18 87.8
MS.gene34738.t1 AT3G60040 27.737 411 230 16 19 390 232 614 3.73e-18 87.4
MS.gene34738.t1 AT1G78760 25.813 461 293 18 2 438 5 440 5.14e-18 86.7
MS.gene34738.t1 AT3G59200 33.673 196 112 6 19 205 7 193 6.41e-18 85.5
MS.gene34738.t1 AT3G44060 30.531 226 139 5 21 238 1 216 9.36e-18 85.5
MS.gene34738.t1 AT3G59200 33.673 196 112 6 19 205 7 193 1.24e-17 85.5
MS.gene34738.t1 AT5G38396 31.818 220 134 5 19 227 2 216 1.28e-17 85.5
MS.gene34738.t1 AT4G13985 29.167 216 137 5 1 207 1 209 1.75e-17 84.7
MS.gene34738.t1 AT1G78750 25.319 470 301 15 3 438 2 455 2.07e-17 84.7
MS.gene34738.t1 AT1G78750 25.319 470 301 15 3 438 2 455 2.07e-17 84.7
MS.gene34738.t1 AT4G00160 27.214 463 273 16 17 445 14 446 4.46e-17 83.6
MS.gene34738.t1 AT3G54910 26.961 408 243 15 54 441 1 373 5.22e-17 82.8
MS.gene34738.t1 AT3G54910 26.961 408 243 15 54 441 1 373 5.22e-17 82.8
MS.gene34738.t1 AT3G54910 26.961 408 243 15 54 441 1 373 5.22e-17 82.8
MS.gene34738.t1 AT3G59190 31.658 199 115 6 19 205 12 201 5.38e-17 82.8
MS.gene34738.t1 AT3G52680 30.283 459 262 19 17 445 19 449 5.66e-17 83.2
MS.gene34738.t1 AT2G26030 24.726 457 275 15 24 438 9 438 5.93e-17 83.2
MS.gene34738.t1 AT2G26030 24.726 457 275 15 24 438 9 438 5.93e-17 83.2
MS.gene34738.t1 AT5G22670 25.943 424 252 18 17 404 9 406 6.96e-17 82.8
MS.gene34738.t1 AT3G59230 32.512 203 112 6 19 205 12 205 7.44e-17 83.2
MS.gene34738.t1 AT2G26030 24.459 462 275 15 24 438 9 443 7.69e-17 82.8
MS.gene34738.t1 AT3G59190 31.658 199 115 6 19 205 12 201 8.14e-17 83.2
MS.gene34738.t1 AT3G50710 26.490 453 276 17 19 441 2 427 1.02e-16 82.4
MS.gene34738.t1 AT5G56380 25.813 461 281 15 19 441 2 439 1.37e-16 82.0
MS.gene34738.t1 AT5G56380 25.813 461 281 15 19 441 2 439 1.37e-16 82.0
MS.gene34738.t1 AT5G22610 24.947 473 286 19 3 442 2 438 1.83e-16 82.0
MS.gene34738.t1 AT3G59210 35.354 198 110 6 19 207 7 195 1.87e-16 82.0
MS.gene34738.t1 AT3G59210 35.354 198 110 6 19 207 7 195 1.87e-16 82.0
MS.gene34738.t1 AT3G59210 35.354 198 110 6 19 207 7 195 1.87e-16 82.0
MS.gene34738.t1 AT3G59210 35.354 198 110 6 19 207 7 195 1.87e-16 82.0
MS.gene34738.t1 AT3G59210 35.354 198 110 6 19 207 7 195 1.87e-16 82.0
MS.gene34738.t1 AT5G18780 25.330 454 283 14 17 438 9 438 2.32e-16 81.3
MS.gene34738.t1 AT5G18780 25.330 454 283 14 17 438 9 438 2.32e-16 81.3
MS.gene34738.t1 AT5G38590 25.513 439 263 14 19 429 2 404 2.38e-16 81.3
MS.gene34738.t1 AT3G58920 25.866 491 272 17 19 441 2 468 2.49e-16 81.3
MS.gene34738.t1 AT3G59170 31.628 215 115 6 19 205 7 217 3.27e-16 81.3
MS.gene34738.t1 AT3G59160 29.958 237 127 7 1 208 1 227 3.70e-16 80.9
MS.gene34738.t1 AT5G56440 26.638 458 270 14 19 440 2 429 4.32e-16 80.5
MS.gene34738.t1 AT4G14103 28.625 269 161 11 19 268 8 264 7.27e-16 79.3
MS.gene34738.t1 AT4G14103 28.625 269 161 11 19 268 8 264 7.27e-16 79.3
MS.gene34738.t1 AT2G26860 28.000 425 235 16 19 405 2 393 7.37e-16 79.7
MS.gene34738.t1 AT2G26860 28.000 425 235 16 19 405 2 393 7.37e-16 79.7
MS.gene34738.t1 AT5G38392 32.663 199 116 6 19 205 2 194 1.01e-15 76.3
MS.gene34738.t1 AT4G14103 28.625 269 161 11 19 268 8 264 1.04e-15 79.3
MS.gene34738.t1 AT3G59240 34.010 197 110 7 19 205 8 194 1.07e-15 79.7
MS.gene34738.t1 AT4G13965 27.130 446 268 17 17 438 8 420 3.74e-15 77.4
MS.gene34738.t1 AT1G66300 25.877 456 273 19 18 438 28 453 7.73e-15 76.6
MS.gene34738.t1 AT3G49150 32.178 202 120 8 14 207 11 203 1.69e-14 75.9
MS.gene34738.t1 AT4G14096 29.082 196 117 7 19 205 8 190 2.06e-14 75.5
MS.gene34738.t1 AT4G14096 29.082 196 117 7 19 205 8 190 2.06e-14 75.5
MS.gene34738.t1 AT5G22660 26.818 440 230 20 17 404 11 410 2.64e-14 75.1
MS.gene34738.t1 AT3G03040 32.663 199 117 7 19 207 2 193 2.78e-14 75.1
MS.gene34738.t1 AT3G03030 31.000 200 120 6 19 207 2 194 4.57e-14 74.3
MS.gene34738.t1 AT3G44810 32.273 220 132 7 17 227 5 216 4.73e-14 74.3
MS.gene34738.t1 AT3G03030 31.000 200 120 6 19 207 2 194 4.82e-14 73.6
MS.gene34738.t1 AT5G62970 25.551 454 284 15 26 440 10 448 5.10e-14 74.3
MS.gene34738.t1 AT3G52680 35.500 200 107 7 17 208 19 204 6.18e-14 73.6
MS.gene34738.t1 AT5G56400 27.632 456 268 19 17 441 31 455 6.75e-14 73.9
MS.gene34738.t1 AT5G18770 25.855 468 289 16 9 439 14 460 9.09e-14 73.6
MS.gene34738.t1 AT5G56370 26.061 330 207 10 19 337 2 305 9.32e-14 72.4
MS.gene34738.t1 AT4G13960 31.959 194 116 4 19 205 2 186 1.71e-13 72.8
MS.gene34738.t1 AT4G13960 31.959 194 116 4 19 205 2 186 1.71e-13 72.8
MS.gene34738.t1 AT5G41840 28.169 213 137 6 6 205 1 210 3.10e-13 72.0
MS.gene34738.t1 AT4G15060 32.178 202 114 8 14 205 21 209 3.73e-13 71.2
MS.gene34738.t1 AT1G55030 27.729 458 276 19 7 440 5 431 5.97e-13 70.9
MS.gene34738.t1 AT3G58940 29.412 204 123 6 19 207 2 199 6.33e-13 71.2
MS.gene34738.t1 AT3G58940 29.412 204 123 6 19 207 2 199 6.33e-13 71.2
MS.gene34738.t1 AT3G59000 32.759 174 105 4 19 185 2 170 6.67e-13 70.9
MS.gene34738.t1 AT5G22700 24.350 423 257 13 9 414 33 409 6.91e-13 70.5
MS.gene34738.t1 AT5G41830 29.500 200 124 6 19 205 13 208 7.65e-13 70.9
MS.gene34738.t1 AT5G56560 34.375 192 107 7 21 207 7 184 7.79e-13 70.9
MS.gene34738.t1 AT2G42720 31.088 193 123 5 19 205 2 190 8.09e-13 70.5
MS.gene34738.t1 AT4G15060 32.663 199 111 8 19 207 172 357 1.10e-12 70.5
MS.gene34738.t1 AT1G55660 31.527 203 127 6 8 205 42 237 1.44e-12 69.3
MS.gene34738.t1 AT1G55030 27.640 445 269 18 18 440 8 421 1.66e-12 69.3
MS.gene34738.t1 AT5G22730 28.297 364 214 18 17 347 26 375 1.66e-12 69.3
MS.gene34738.t1 AT5G38590 30.653 199 112 7 19 208 2 183 1.91e-12 68.2
MS.gene34738.t1 AT5G53635 30.964 197 113 6 20 208 1 182 2.85e-12 68.6
MS.gene34738.t1 AT1G55660 31.527 203 127 6 8 205 42 237 2.89e-12 68.9
MS.gene34738.t1 AT1G52650 28.311 219 143 5 19 229 2 214 3.02e-12 68.9
MS.gene34738.t1 AT5G56410 31.313 198 116 5 26 207 10 203 3.09e-12 68.9
MS.gene34738.t1 AT3G58860 26.601 203 131 5 14 207 2 195 3.57e-12 68.6
MS.gene34738.t1 AT5G50270 26.933 401 237 18 37 408 21 394 3.88e-12 68.2
MS.gene34738.t1 AT5G22700 24.099 444 273 15 9 414 33 450 4.18e-12 68.2
MS.gene34738.t1 AT4G00320 29.612 206 123 8 16 205 9 208 5.54e-12 68.2
MS.gene34738.t1 AT5G22700 24.424 434 264 15 19 414 6 413 8.44e-12 67.4
MS.gene34738.t1 AT5G22700 24.424 434 264 15 19 414 6 413 8.44e-12 67.4
MS.gene34738.t1 AT5G22700 24.424 434 264 15 19 414 6 413 8.44e-12 67.4
MS.gene34738.t1 AT5G22700 24.424 434 264 15 19 414 6 413 8.44e-12 67.4
MS.gene34738.t1 AT3G58880 32.512 203 112 9 18 207 2 192 1.18e-11 67.0
MS.gene34738.t1 AT3G58900 30.233 215 134 5 19 225 2 208 1.18e-11 65.9
MS.gene34738.t1 AT1G05080 31.455 213 122 7 1 207 1 195 1.29e-11 66.6
MS.gene34738.t1 AT1G64540 28.625 269 151 11 19 268 5 251 1.42e-11 66.6
MS.gene34738.t1 AT1G64540 28.625 269 151 11 19 268 5 251 1.42e-11 66.6
MS.gene34738.t1 AT3G58900 29.907 214 136 4 19 225 2 208 1.55e-11 65.9
MS.gene34738.t1 AT3G58900 29.907 214 136 4 19 225 2 208 1.55e-11 65.9
MS.gene34738.t1 AT5G18780 30.151 199 113 6 17 207 9 189 1.62e-11 66.2
MS.gene34738.t1 AT5G18780 30.151 199 113 6 17 207 9 189 1.62e-11 66.2
MS.gene34738.t1 AT3G58900 30.457 197 121 5 19 207 2 190 1.80e-11 66.2
MS.gene34738.t1 AT1G58310 28.440 218 117 7 19 209 8 213 1.94e-11 66.2
MS.gene34738.t1 AT5G41630 31.683 202 119 10 17 205 10 205 2.10e-11 66.2
MS.gene34738.t1 AT5G18770 32.057 209 119 7 9 207 14 209 2.20e-11 65.9
MS.gene34738.t1 AT4G10410 29.949 197 104 7 33 207 1 185 2.53e-11 64.3
MS.gene34738.t1 AT3G59000 35.000 120 69 2 19 133 2 117 2.88e-11 65.1
MS.gene34738.t1 AT5G22610 27.619 210 140 5 3 207 2 204 3.11e-11 65.9
MS.gene34738.t1 AT3G58820 30.323 155 98 3 19 167 2 152 3.32e-11 65.5
MS.gene34738.t1 AT4G27050 26.882 279 162 10 18 268 3 267 3.47e-11 65.5
MS.gene34738.t1 AT4G27050 26.882 279 162 10 18 268 3 267 3.47e-11 65.5
MS.gene34738.t1 AT4G27050 26.882 279 162 10 18 268 3 267 3.47e-11 65.5
MS.gene34738.t1 AT4G27050 26.882 279 162 10 18 268 3 267 3.47e-11 65.5
MS.gene34738.t1 AT4G27050 26.882 279 162 10 18 268 3 267 3.47e-11 65.5
MS.gene34738.t1 AT2G04230 31.579 228 125 9 19 230 13 225 6.09e-11 64.7
MS.gene34738.t1 AT5G15620 28.188 298 162 13 19 289 2 274 6.58e-11 64.3

Find 107 sgRNAs with CRISPR-Local

Find 136 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGAACATTGGTCAGAAATT+TGG 0.157901 8.1:+44881484 None:intergenic
TGAAGTAGATTGCAAAATTC+TGG 0.220987 8.1:+44881093 None:intergenic
AGGTGGGATTTGAGACATTT+AGG 0.244455 8.1:+44880826 None:intergenic
ATCGTCAGGTCTTCCATTTC+GGG 0.255849 8.1:-44882178 MS.gene34738:CDS
AATTCTGGATTATTTATAAC+AGG 0.256845 8.1:+44881108 None:intergenic
TATCGTCAGGTCTTCCATTT+CGG 0.259214 8.1:-44882179 MS.gene34738:CDS
AATGATGCCCAATGTGGTTT+TGG 0.312213 8.1:+44881373 None:intergenic
GGAACATTGGTCAGAAATTT+GGG 0.313252 8.1:+44881485 None:intergenic
CTGCTTCAACTCGAACCTTC+TGG 0.329644 8.1:-44881052 MS.gene34738:CDS
TGTGCCACCTTCCTCCAAAA+AGG 0.351535 8.1:-44881462 MS.gene34738:CDS
CTCGCAGATGGCGCCACCTC+TGG 0.354975 8.1:-44882205 MS.gene34738:CDS
TCAGACATTGCCTTTCTCTC+TGG 0.356495 8.1:-44881545 MS.gene34738:CDS
CTCTGAGGCGGTTGAGAATA+GGG 0.365625 8.1:+44881282 None:intergenic
TAGGAAGAACCATCACCTTT+AGG 0.373743 8.1:-44880877 MS.gene34738:CDS
GAAACTCGACATGCGCGTTA+TGG 0.374368 8.1:-44881570 MS.gene34738:CDS
GTATCCTTCTATGTGAATAT+AGG 0.383394 8.1:+44880801 None:intergenic
AAATAAAATCCCATCGTTTG+AGG 0.383750 8.1:-44881400 MS.gene34738:CDS
AAAACCACATTGGGCATCAT+TGG 0.392776 8.1:-44881371 MS.gene34738:CDS
GATGCAGATGGGTCTCCTTA+AGG 0.392816 8.1:-44880607 None:intergenic
TCTAAACGCTGCAGTCTTGT+TGG 0.405825 8.1:-44881650 MS.gene34738:intron
ATCAGCATTTGGTCACCATC+GGG 0.411925 8.1:+44881936 None:intergenic
CTCACCTATATTCACATAGA+AGG 0.412719 8.1:-44880805 MS.gene34738:CDS
ATATGCAGAGTTTCGAGAAC+GGG 0.430137 8.1:+44881518 None:intergenic
TGGCACATTTCAGACCCCTT+TGG 0.434270 8.1:+44880640 None:intergenic
AACGGGGCAGCCAGAGAGAA+AGG 0.437002 8.1:+44881535 None:intergenic
TCTCTGAGGCGGTTGAGAAT+AGG 0.437377 8.1:+44881281 None:intergenic
AGGTCTGCCAAAACCACATT+GGG 0.446150 8.1:-44881380 MS.gene34738:CDS
ATGTGGATCACTGCCGCCAT+TGG 0.447952 8.1:-44881996 MS.gene34738:CDS
GCACCAACCTCGTTTCCCTT+AGG 0.448633 8.1:-44881890 MS.gene34738:intron
TGGGCCCCACCTTCAAGAAC+TGG 0.453700 8.1:-44881976 MS.gene34738:CDS
CCGTCTCCACTCTGGCATAT+CGG 0.454386 8.1:-44882051 MS.gene34738:CDS
AAGAAGGGAGGATCAGCATT+TGG 0.464635 8.1:+44881925 None:intergenic
AGATTAACCCGTGCTCCAAA+GGG 0.465493 8.1:-44880655 MS.gene34738:CDS
TTCTTGAAGGTGGGGCCCAA+TGG 0.466618 8.1:+44881980 None:intergenic
TGTGGATCACTGCCGCCATT+GGG 0.470425 8.1:-44881995 MS.gene34738:CDS
TCAGCTCTTCTTCAAGTCCT+TGG 0.472411 8.1:+44880779 None:intergenic
GTGCAATTCAAGAGGGAAGA+AGG 0.476286 8.1:+44881909 None:intergenic
CAGAAGGTTCGAGTTGAAGC+AGG 0.476389 8.1:+44881053 None:intergenic
AAGATTAACCCGTGCTCCAA+AGG 0.478757 8.1:-44880656 MS.gene34738:CDS
CGAGTCTTGTTTCTCGCAGA+TGG 0.482951 8.1:-44882217 MS.gene34738:CDS
TTCGAATGTCACGGGATGTA+CGG 0.483799 8.1:+44882078 None:intergenic
AGTGCGAGTCGTCCCCGAAA+TGG 0.487438 8.1:+44882165 None:intergenic
CAGTAGATATAATGCATTGT+CGG 0.489268 8.1:+44881256 None:intergenic
TCAACAATGGAAATTTCTCA+TGG 0.492414 8.1:-44881433 MS.gene34738:CDS
TTCAGACCCCTTTGGAGCAC+GGG 0.495787 8.1:+44880648 None:intergenic
CAACTTGAATTTGATGCAGA+TGG 0.499106 8.1:-44880619 MS.gene34738:CDS
AGTAGATATAATGCATTGTC+GGG 0.500116 8.1:+44881257 None:intergenic
TTTGAACAATTTCAATTGAG+TGG 0.511478 8.1:+44882136 None:intergenic
CGAAAGTTCCGTCTCCACTC+TGG 0.511900 8.1:-44882059 MS.gene34738:CDS
CATTTGGTCACCATCGGGGT+TGG 0.512406 8.1:+44881941 None:intergenic
TGTCGAGATCCAGTTCTTGA+AGG 0.515111 8.1:+44881967 None:intergenic
GAGATCCAGTTCTTGAAGGT+GGG 0.517008 8.1:+44881971 None:intergenic
CCACCTCTGGAAGTATCGTC+AGG 0.518496 8.1:-44882192 MS.gene34738:CDS
AGTTTCAGCCACTTGAGTGA+TGG 0.526074 8.1:+44881587 None:intergenic
TCTCAATAATGTTAACCAGA+AGG 0.529397 8.1:+44881037 None:intergenic
TGCAGCTCACATGCTCCTAA+AGG 0.530041 8.1:+44880862 None:intergenic
TTGAAGGTGGGGCCCAATGG+CGG 0.531993 8.1:+44881983 None:intergenic
ATGTGGCACACTAGTGAGTC+CGG 0.533410 8.1:+44882275 None:intergenic
TTTGGCAGACCTCAAACGAT+GGG 0.549037 8.1:+44881391 None:intergenic
GGAAGGTGGCACAGGAACAT+TGG 0.549960 8.1:+44881472 None:intergenic
CGAGATCCAGTTCTTGAAGG+TGG 0.550648 8.1:+44881970 None:intergenic
GATCAGCATTTGGTCACCAT+CGG 0.551411 8.1:+44881935 None:intergenic
CCGATATGCCAGAGTGGAGA+CGG 0.554409 8.1:+44882051 None:intergenic
GAGGTCTGCCAAAACCACAT+TGG 0.557086 8.1:-44881381 MS.gene34738:CDS
TTCTGGATTATTTATAACAG+GGG 0.560129 8.1:+44881110 None:intergenic
TTTCAGACCCCTTTGGAGCA+CGG 0.563281 8.1:+44880647 None:intergenic
CTATGTGAATATAGGTGAGG+TGG 0.567193 8.1:+44880809 None:intergenic
CGACTTGATGAGTATTCTAC+CGG 0.568711 8.1:-44882294 MS.gene34738:CDS
CATCTGCATCAAATTCAAGT+TGG 0.571014 8.1:+44880620 None:intergenic
AGATCCAGTTCTTGAAGGTG+GGG 0.574983 8.1:+44881972 None:intergenic
TCACATGCTCCTAAAGGTGA+TGG 0.580001 8.1:+44880868 None:intergenic
TGCAATTCAAGAGGGAAGAA+GGG 0.594414 8.1:+44881910 None:intergenic
TATGTGAATATAGGTGAGGT+GGG 0.599772 8.1:+44880810 None:intergenic
GACGGAACTTTCGAATGTCA+CGG 0.599917 8.1:+44882069 None:intergenic
ACGGAACTTTCGAATGTCAC+GGG 0.601922 8.1:+44882070 None:intergenic
TGACCTAAGGGAAACGAGGT+TGG 0.602577 8.1:+44881887 None:intergenic
ATTCTGGATTATTTATAACA+GGG 0.605085 8.1:+44881109 None:intergenic
CACATGTTGATGCAGTTGCT+AGG 0.605641 8.1:+44882014 None:intergenic
CGAGGTTGGTGCAATTCAAG+AGG 0.606867 8.1:+44881901 None:intergenic
AGAAGGTTCGAGTTGAAGCA+GGG 0.607774 8.1:+44881054 None:intergenic
AACTTGAATTTGATGCAGAT+GGG 0.614698 8.1:-44880618 MS.gene34738:CDS
AATATGCAGAGTTTCGAGAA+CGG 0.614772 8.1:+44881517 None:intergenic
GAATGTCACGGGATGTACGG+AGG 0.618589 8.1:+44882081 None:intergenic
AATGTCACGGGATGTACGGA+GGG 0.633611 8.1:+44882082 None:intergenic
CTAGCAACTGCATCAACATG+TGG 0.635235 8.1:-44882013 MS.gene34738:CDS
TTTATAACAGGGGCACGAAG+TGG 0.635619 8.1:+44881120 None:intergenic
CTCGACATAGCCAACCCCGA+TGG 0.641689 8.1:-44881951 MS.gene34738:CDS
TGGCAACGTGCATAGTGTTG+TGG 0.644841 8.1:-44881351 MS.gene34738:CDS
TCTCATACTTCAAATCGACA+AGG 0.646252 8.1:-44880995 MS.gene34738:intron
CTTCTATGTGAATATAGGTG+AGG 0.646334 8.1:+44880806 None:intergenic
CGGTAGAATACTCATCAAGT+CGG 0.650262 8.1:+44882295 None:intergenic
CATTGTCGGGATCTCTGAGG+CGG 0.656358 8.1:+44881270 None:intergenic
TATGCAGAGTTTCGAGAACG+GGG 0.662560 8.1:+44881519 None:intergenic
TTGAGAGGAATGATAGGATG+TGG 0.672713 8.1:+44882258 None:intergenic
CCTGACGATACTTCCAGAGG+TGG 0.676431 8.1:+44882192 None:intergenic
TCGTCAGGTCTTCCATTTCG+GGG 0.679224 8.1:-44882177 MS.gene34738:CDS
TCAGCATTTGGTCACCATCG+GGG 0.679792 8.1:+44881937 None:intergenic
ATTCACATAGAAGGATACCA+AGG 0.680294 8.1:-44880796 MS.gene34738:CDS
AACCTGACCTAAGGGAAACG+AGG 0.690116 8.1:+44881883 None:intergenic
GAGGTTGGTGCAATTCAAGA+GGG 0.693328 8.1:+44881902 None:intergenic
AATTCAAGAGGGAAGAAGGG+AGG 0.701014 8.1:+44881913 None:intergenic
GATTAACCCGTGCTCCAAAG+GGG 0.703576 8.1:-44880654 MS.gene34738:CDS
AGACCTGACGATACTTCCAG+AGG 0.708801 8.1:+44882189 None:intergenic
GTTGCCAATGATGCCCAATG+TGG 0.714684 8.1:+44881367 None:intergenic
ATGCATTGTCGGGATCTCTG+AGG 0.715195 8.1:+44881267 None:intergenic
AAAGAAGAAGAAGAACACGA+TGG 0.720463 8.1:-44882320 MS.gene34738:CDS
GTTCATCCGATATGCCAGAG+TGG 0.724883 8.1:+44882045 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAATGAAAGTTAAATTT+GGG + chr8.1:44881230-44881249 None:intergenic 10.0%
!! TATATAATGAAAGTTAAATT+TGG + chr8.1:44881231-44881250 None:intergenic 10.0%
!! AACTTTCATTATATAATATC+TGG - chr8.1:44881236-44881255 MS.gene34738:CDS 15.0%
!! AATTCTGGATTATTTATAAC+AGG + chr8.1:44881851-44881870 None:intergenic 20.0%
!! ATTCTGGATTATTTATAACA+GGG + chr8.1:44881850-44881869 None:intergenic 20.0%
!!! GTAGATAATGTTAACTTTTA+TGG - chr8.1:44881278-44881297 MS.gene34738:CDS 20.0%
!!! TATTTTTGTTGATATTTCGA+TGG - chr8.1:44882249-44882268 MS.gene34738:CDS 20.0%
!!! TGTATCTGTATAACTATTTT+TGG - chr8.1:44881770-44881789 MS.gene34738:intron 20.0%
! AAAAAGGTGAAATTCAACAA+TGG - chr8.1:44881510-44881529 MS.gene34738:CDS 25.0%
! AGAATGAAATGAAAACAGAA+GGG - chr8.1:44881194-44881213 MS.gene34738:intron 25.0%
! TAGAATGAAATGAAAACAGA+AGG - chr8.1:44881193-44881212 MS.gene34738:intron 25.0%
! TTCTGGATTATTTATAACAG+GGG + chr8.1:44881849-44881868 None:intergenic 25.0%
! TTTGAACAATTTCAATTGAG+TGG + chr8.1:44880823-44880842 None:intergenic 25.0%
!! ATTGTTGAATTTCACCTTTT+TGG + chr8.1:44881511-44881530 None:intergenic 25.0%
!! GCTGAATATATTTTGTTGAA+CGG - chr8.1:44882205-44882224 MS.gene34738:CDS 25.0%
!!! AACGATGGGATTTTATTTTA+AGG + chr8.1:44881554-44881573 None:intergenic 25.0%
AAATAAAATCCCATCGTTTG+AGG - chr8.1:44881556-44881575 MS.gene34738:CDS 30.0%
AACTTGAATTTGATGCAGAT+GGG - chr8.1:44882338-44882357 MS.gene34738:CDS 30.0%
AGTAGATATAATGCATTGTC+GGG + chr8.1:44881702-44881721 None:intergenic 30.0%
CAGTAGATATAATGCATTGT+CGG + chr8.1:44881703-44881722 None:intergenic 30.0%
GTATCCTTCTATGTGAATAT+AGG + chr8.1:44882158-44882177 None:intergenic 30.0%
TCAACAATGGAAATTTCTCA+TGG - chr8.1:44881523-44881542 MS.gene34738:CDS 30.0%
TCTCAATAATGTTAACCAGA+AGG + chr8.1:44881922-44881941 None:intergenic 30.0%
TGAAGTAGATTGCAAAATTC+TGG + chr8.1:44881866-44881885 None:intergenic 30.0%
TTGTACATGATAACAAGTGA+TGG + chr8.1:44881809-44881828 None:intergenic 30.0%
!! TTTTGATTGAGAGGAATGAT+AGG + chr8.1:44880707-44880726 None:intergenic 30.0%
AAAGAAGAAGAAGAACACGA+TGG - chr8.1:44880636-44880655 MS.gene34738:CDS 35.0%
AATATGCAGAGTTTCGAGAA+CGG + chr8.1:44881442-44881461 None:intergenic 35.0%
AGGAACATTGGTCAGAAATT+TGG + chr8.1:44881475-44881494 None:intergenic 35.0%
ATTCACATAGAAGGATACCA+AGG - chr8.1:44882160-44882179 MS.gene34738:CDS 35.0%
CAACTTGAATTTGATGCAGA+TGG - chr8.1:44882337-44882356 MS.gene34738:CDS 35.0%
CATCTGCATCAAATTCAAGT+TGG + chr8.1:44882339-44882358 None:intergenic 35.0%
CTCACCTATATTCACATAGA+AGG - chr8.1:44882151-44882170 MS.gene34738:CDS 35.0%
CTTCTATGTGAATATAGGTG+AGG + chr8.1:44882153-44882172 None:intergenic 35.0%
GGAACATTGGTCAGAAATTT+GGG + chr8.1:44881474-44881493 None:intergenic 35.0%
TAACTGAAAACCTGACCTAA+GGG + chr8.1:44881084-44881103 None:intergenic 35.0%
TATGTGAATATAGGTGAGGT+GGG + chr8.1:44882149-44882168 None:intergenic 35.0%
TCTCATACTTCAAATCGACA+AGG - chr8.1:44881961-44881980 MS.gene34738:CDS 35.0%
TGATATCCATTGTTGTCGAT+AGG - chr8.1:44882060-44882079 MS.gene34738:CDS 35.0%
TTGTTATCATGTACAAGCAG+TGG - chr8.1:44881813-44881832 MS.gene34738:intron 35.0%
! GTTGAATTTCACCTTTTTGG+AGG + chr8.1:44881508-44881527 None:intergenic 35.0%
! TTCATTTTCCATCACTCAAG+TGG - chr8.1:44881361-44881380 MS.gene34738:CDS 35.0%
!! AATTTCACCTTTTTGGAGGA+AGG + chr8.1:44881504-44881523 None:intergenic 35.0%
!! GGGTTAATCTTTTGAGAGAA+CGG + chr8.1:44882291-44882310 None:intergenic 35.0%
AAAACCACATTGGGCATCAT+TGG - chr8.1:44881585-44881604 MS.gene34738:CDS 40.0%
ATATGCAGAGTTTCGAGAAC+GGG + chr8.1:44881441-44881460 None:intergenic 40.0%
CGACTTGATGAGTATTCTAC+CGG - chr8.1:44880662-44880681 MS.gene34738:CDS 40.0%
CGGTAGAATACTCATCAAGT+CGG + chr8.1:44880664-44880683 None:intergenic 40.0%
CTATGTGAATATAGGTGAGG+TGG + chr8.1:44882150-44882169 None:intergenic 40.0%
GTAACTGAAAACCTGACCTA+AGG + chr8.1:44881085-44881104 None:intergenic 40.0%
GTTCTTCCTATCGACAACAA+TGG + chr8.1:44882069-44882088 None:intergenic 40.0%
TAGGAAGAACCATCACCTTT+AGG - chr8.1:44882079-44882098 MS.gene34738:CDS 40.0%
TATCGTCAGGTCTTCCATTT+CGG - chr8.1:44880777-44880796 MS.gene34738:CDS 40.0%
TGCAATTCAAGAGGGAAGAA+GGG + chr8.1:44881049-44881068 None:intergenic 40.0%
TTGAGAGGAATGATAGGATG+TGG + chr8.1:44880701-44880720 None:intergenic 40.0%
! AATGATGCCCAATGTGGTTT+TGG + chr8.1:44881586-44881605 None:intergenic 40.0%
! AGGTGGGATTTGAGACATTT+AGG + chr8.1:44882133-44882152 None:intergenic 40.0%
AAGAAGGGAGGATCAGCATT+TGG + chr8.1:44881034-44881053 None:intergenic 45.0%
AAGATTAACCCGTGCTCCAA+AGG - chr8.1:44882300-44882319 MS.gene34738:CDS 45.0%
AATTCAAGAGGGAAGAAGGG+AGG + chr8.1:44881046-44881065 None:intergenic 45.0%
ACGGAACTTTCGAATGTCAC+GGG + chr8.1:44880889-44880908 None:intergenic 45.0%
AGATCCAGTTCTTGAAGGTG+GGG + chr8.1:44880987-44881006 None:intergenic 45.0%
AGATTAACCCGTGCTCCAAA+GGG - chr8.1:44882301-44882320 MS.gene34738:CDS 45.0%
AGGTCTGCCAAAACCACATT+GGG - chr8.1:44881576-44881595 MS.gene34738:CDS 45.0%
AGTTTCAGCCACTTGAGTGA+TGG + chr8.1:44881372-44881391 None:intergenic 45.0%
ATCAGCATTTGGTCACCATC+GGG + chr8.1:44881023-44881042 None:intergenic 45.0%
ATCGTCAGGTCTTCCATTTC+GGG - chr8.1:44880778-44880797 MS.gene34738:CDS 45.0%
CACATGTTGATGCAGTTGCT+AGG + chr8.1:44880945-44880964 None:intergenic 45.0%
CCTCTCAATCAAAAACGCTG+TGG - chr8.1:44880713-44880732 MS.gene34738:CDS 45.0%
CTAGCAACTGCATCAACATG+TGG - chr8.1:44880943-44880962 MS.gene34738:intron 45.0%
GACGGAACTTTCGAATGTCA+CGG + chr8.1:44880890-44880909 None:intergenic 45.0%
GAGATCCAGTTCTTGAAGGT+GGG + chr8.1:44880988-44881007 None:intergenic 45.0%
GATCAGCATTTGGTCACCAT+CGG + chr8.1:44881024-44881043 None:intergenic 45.0%
GCTGCGTCATTCGACAAAAA+AGG - chr8.1:44881722-44881741 MS.gene34738:intron 45.0%
GTGCAATTCAAGAGGGAAGA+AGG + chr8.1:44881050-44881069 None:intergenic 45.0%
TATGCAGAGTTTCGAGAACG+GGG + chr8.1:44881440-44881459 None:intergenic 45.0%
TCACATGCTCCTAAAGGTGA+TGG + chr8.1:44882091-44882110 None:intergenic 45.0%
TCAGACATTGCCTTTCTCTC+TGG - chr8.1:44881411-44881430 MS.gene34738:CDS 45.0%
TCAGCTCTTCTTCAAGTCCT+TGG + chr8.1:44882180-44882199 None:intergenic 45.0%
TGTCGAGATCCAGTTCTTGA+AGG + chr8.1:44880992-44881011 None:intergenic 45.0%
TTCGAATGTCACGGGATGTA+CGG + chr8.1:44880881-44880900 None:intergenic 45.0%
TTTGGCAGACCTCAAACGAT+GGG + chr8.1:44881568-44881587 None:intergenic 45.0%
! TCTAAACGCTGCAGTCTTGT+TGG - chr8.1:44881306-44881325 MS.gene34738:CDS 45.0%
! TTTATAACAGGGGCACGAAG+TGG + chr8.1:44881839-44881858 None:intergenic 45.0%
! TTTTGGCAGACCTCAAACGA+TGG + chr8.1:44881569-44881588 None:intergenic 45.0%
!! AGAAGGTTCGAGTTGAAGCA+GGG + chr8.1:44881905-44881924 None:intergenic 45.0%
!! CCACAGCGTTTTTGATTGAG+AGG + chr8.1:44880716-44880735 None:intergenic 45.0%
!! GAGGTTGGTGCAATTCAAGA+GGG + chr8.1:44881057-44881076 None:intergenic 45.0%
!! TTCACCTTTTTGGAGGAAGG+TGG + chr8.1:44881501-44881520 None:intergenic 45.0%
AACCTCGTTTCCCTTAGGTC+AGG - chr8.1:44881071-44881090 MS.gene34738:CDS 50.0%
AACCTGACCTAAGGGAAACG+AGG + chr8.1:44881076-44881095 None:intergenic 50.0%
AATGTCACGGGATGTACGGA+GGG + chr8.1:44880877-44880896 None:intergenic 50.0%
AGACCTGACGATACTTCCAG+AGG + chr8.1:44880770-44880789 None:intergenic 50.0%
ATGCATTGTCGGGATCTCTG+AGG + chr8.1:44881692-44881711 None:intergenic 50.0%
ATGTGGCACACTAGTGAGTC+CGG + chr8.1:44880684-44880703 None:intergenic 50.0%
CGAGATCCAGTTCTTGAAGG+TGG + chr8.1:44880989-44881008 None:intergenic 50.0%
CTGCTTCAACTCGAACCTTC+TGG - chr8.1:44881904-44881923 MS.gene34738:CDS 50.0%
GAAACTCGACATGCGCGTTA+TGG - chr8.1:44881386-44881405 MS.gene34738:CDS 50.0%
GAGGTCTGCCAAAACCACAT+TGG - chr8.1:44881575-44881594 MS.gene34738:CDS 50.0%
GATTAACCCGTGCTCCAAAG+GGG - chr8.1:44882302-44882321 MS.gene34738:CDS 50.0%
GTTCATCCGATATGCCAGAG+TGG + chr8.1:44880914-44880933 None:intergenic 50.0%
GTTGCCAATGATGCCCAATG+TGG + chr8.1:44881592-44881611 None:intergenic 50.0%
TCAGCATTTGGTCACCATCG+GGG + chr8.1:44881022-44881041 None:intergenic 50.0%
TCGTCAGGTCTTCCATTTCG+GGG - chr8.1:44880779-44880798 MS.gene34738:CDS 50.0%
TGACCTAAGGGAAACGAGGT+TGG + chr8.1:44881072-44881091 None:intergenic 50.0%
TGCAGCTCACATGCTCCTAA+AGG + chr8.1:44882097-44882116 None:intergenic 50.0%
TGGCAACGTGCATAGTGTTG+TGG - chr8.1:44881605-44881624 MS.gene34738:CDS 50.0%
TGGCACATTTCAGACCCCTT+TGG + chr8.1:44882319-44882338 None:intergenic 50.0%
TGTGCCACCTTCCTCCAAAA+AGG - chr8.1:44881494-44881513 MS.gene34738:CDS 50.0%
!! CAGAAGGTTCGAGTTGAAGC+AGG + chr8.1:44881906-44881925 None:intergenic 50.0%
!! CGAGGTTGGTGCAATTCAAG+AGG + chr8.1:44881058-44881077 None:intergenic 50.0%
!! CGAGTCTTGTTTCTCGCAGA+TGG - chr8.1:44880739-44880758 MS.gene34738:CDS 50.0%
!! CTCTGAGGCGGTTGAGAATA+GGG + chr8.1:44881677-44881696 None:intergenic 50.0%
!! TCTCTGAGGCGGTTGAGAAT+AGG + chr8.1:44881678-44881697 None:intergenic 50.0%
!! TTTCAGACCCCTTTGGAGCA+CGG + chr8.1:44882312-44882331 None:intergenic 50.0%
!! TTTTTGGAGGAAGGTGGCAC+AGG + chr8.1:44881495-44881514 None:intergenic 50.0%
ATGTGGATCACTGCCGCCAT+TGG - chr8.1:44880960-44880979 MS.gene34738:intron 55.0%
CATTTGGTCACCATCGGGGT+TGG + chr8.1:44881018-44881037 None:intergenic 55.0%
CCGATATGCCAGAGTGGAGA+CGG + chr8.1:44880908-44880927 None:intergenic 55.0%
CCGTCTCCACTCTGGCATAT+CGG - chr8.1:44880905-44880924 MS.gene34738:intron 55.0%
CCTGACGATACTTCCAGAGG+TGG + chr8.1:44880767-44880786 None:intergenic 55.0%
CGAAAGTTCCGTCTCCACTC+TGG - chr8.1:44880897-44880916 MS.gene34738:intron 55.0%
GAATGTCACGGGATGTACGG+AGG + chr8.1:44880878-44880897 None:intergenic 55.0%
GCACCAACCTCGTTTCCCTT+AGG - chr8.1:44881066-44881085 MS.gene34738:CDS 55.0%
GGAAGGTGGCACAGGAACAT+TGG + chr8.1:44881487-44881506 None:intergenic 55.0%
TGTGGATCACTGCCGCCATT+GGG - chr8.1:44880961-44880980 MS.gene34738:intron 55.0%
TTCTTGAAGGTGGGGCCCAA+TGG + chr8.1:44880979-44880998 None:intergenic 55.0%
! CATTGTCGGGATCTCTGAGG+CGG + chr8.1:44881689-44881708 None:intergenic 55.0%
!! CCACCTCTGGAAGTATCGTC+AGG - chr8.1:44880764-44880783 MS.gene34738:CDS 55.0%
!! TTCAGACCCCTTTGGAGCAC+GGG + chr8.1:44882311-44882330 None:intergenic 55.0%
AACGGGGCAGCCAGAGAGAA+AGG + chr8.1:44881424-44881443 None:intergenic 60.0%
AGTGCGAGTCGTCCCCGAAA+TGG + chr8.1:44880794-44880813 None:intergenic 60.0%
CTCGACATAGCCAACCCCGA+TGG - chr8.1:44881005-44881024 MS.gene34738:CDS 60.0%
TGGGCCCCACCTTCAAGAAC+TGG - chr8.1:44880980-44880999 MS.gene34738:intron 60.0%
TTGAAGGTGGGGCCCAATGG+CGG + chr8.1:44880976-44880995 None:intergenic 60.0%
CTCGCAGATGGCGCCACCTC+TGG - chr8.1:44880751-44880770 MS.gene34738:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 44880609 44882369 44880609 ID=MS.gene34738
chr8.1 mRNA 44880609 44882369 44880609 ID=MS.gene34738.t1;Parent=MS.gene34738
chr8.1 exon 44881891 44882369 44881891 ID=MS.gene34738.t1.exon1;Parent=MS.gene34738.t1
chr8.1 CDS 44881891 44882369 44881891 ID=cds.MS.gene34738.t1;Parent=MS.gene34738.t1
chr8.1 exon 44881235 44881658 44881235 ID=MS.gene34738.t1.exon2;Parent=MS.gene34738.t1
chr8.1 CDS 44881235 44881658 44881235 ID=cds.MS.gene34738.t1;Parent=MS.gene34738.t1
chr8.1 exon 44880996 44881145 44880996 ID=MS.gene34738.t1.exon3;Parent=MS.gene34738.t1
chr8.1 CDS 44880996 44881145 44880996 ID=cds.MS.gene34738.t1;Parent=MS.gene34738.t1
chr8.1 exon 44880609 44880896 44880609 ID=MS.gene34738.t1.exon4;Parent=MS.gene34738.t1
chr8.1 CDS 44880609 44880896 44880609 ID=cds.MS.gene34738.t1;Parent=MS.gene34738.t1
Gene Sequence

>MS.gene34738

ATGGCTGATTCTAAAATCAAACGACGCAAAGAAGAAGAAGAACACGATGGCACCGACTTGATGAGTATTCTACCGGACTCACTAGTGTGCCACATCCTATCATTCCTCTCAATCAAAAACGCTGTGGCGACGAGTCTTGTTTCTCGCAGATGGCGCCACCTCTGGAAGTATCGTCAGGTCTTCCATTTCGGGGACGACTCGCACTGCTACACCACTCAATTGAAATTGTTCAAAAAATTTGCATTCTTCGTGAACGCTGTGCTATCCCTCCGTACATCCCGTGACATTCGAAAGTTCCGTCTCCACTCTGGCATATCGGATGAACAAAAGTTTCCTAGCAACTGCATCAACATGTGGATCACTGCCGCCATTGGGCCCCACCTTCAAGAACTGGATCTCGACATAGCCAACCCCGATGGTGACCAAATGCTGATCCTCCCTTCTTCCCTCTTGAATTGCACCAACCTCGTTTCCCTTAGGTCAGGTTTTCAGTTACAAATCAACATTTTTTTTTTTTTTTTTAGTTTTAGTTTTATTCAATTCAACTCATTCAGAAATTAATATATGTCTATATATATATATAGTAGAATGAAATGAAAACAGAAGGGTTTAATTTTGCCCAAATTTAACTTTCATTATATAATATCTGGAAATAGTATTTATGAATTTGTAGATAATGTTAACTTTTATGGTTTCATCTAAACGCTGCAGTCTTGTTGGTGCAATTGAAATGAAAGTTCAACATTCTTCAGTTCATTTTCCATCACTCAAGTGGCTGAAACTCGACATGCGCGTTATGGATTCAGACATTGCCTTTCTCTCTGGCTGCCCCGTTCTCGAAACTCTGCATATTTACTTTGAACCCAAATTTCTGACCAATGTTCCTGTGCCACCTTCCTCCAAAAAGGTGAAATTCAACAATGGAAATTTCTCATGGACTTTCCTTAAAATAAAATCCCATCGTTTGAGGTCTGCCAAAACCACATTGGGCATCATTGGCAACGTGCATAGTGTTGTGGAAGCATATCTTGATGTCTTTTGCGAGCGTGAGAGTGAATTTGTCGACCCTATTCTCAACCGCCTCAGAGATCCCGACAATGCATTATATCTACTGCTGCGTCATTCGACAAAAAAGGTGAAGTTTTATTACTATGATTTATATGTATCTGTATAACTATTTTTGGTATTGATATTGTGCCATCACTTGTTATCATGTACAAGCAGTGGCCACTTCGTGCCCCTGTTATAAATAATCCAGAATTTTGCAATCTACTTCATCTAAAGTTCATTCTTCCCTGCTTCAACTCGAACCTTCTGGTTAACATTATTGAGAAATGTCATATTCTTCAAGTTCTCATACTTCAAATCGACAAGGTTTGTTGACTTATCAAGTTTAATTCAATGAATGTTTATATTACTCTGTACACACAAAAATATACTTGTAGTCATCATGATATCCATTGTTGTCGATAGGAAGAACCATCACCTTTAGGAGCATGTGAGCTGCAGTCAACAACAGTTCCTAAATGTCTCAAATCCCACCTCACCTATATTCACATAGAAGGATACCAAGGACTTGAAGAAGAGCTGACATTTGCTGAATATATTTTGTTGAACGGACTTGTTTTGAAGACAATGCTTATTTTTGTTGATATTTCGATGGACATAACAAACAAGTACCGTTCTCTCAAAAGATTAACCCGTGCTCCAAAGGGGTCTGAAATGTGCCAACTTGAATTTGATGCAGATGGGTCTCCTTAA

Protein sequence

>MS.gene34738.t1

MADSKIKRRKEEEEHDGTDLMSILPDSLVCHILSFLSIKNAVATSLVSRRWRHLWKYRQVFHFGDDSHCYTTQLKLFKKFAFFVNAVLSLRTSRDIRKFRLHSGISDEQKFPSNCINMWITAAIGPHLQELDLDIANPDGDQMLILPSSLLNCTNLVSLSLVGAIEMKVQHSSVHFPSLKWLKLDMRVMDSDIAFLSGCPVLETLHIYFEPKFLTNVPVPPSSKKVKFNNGNFSWTFLKIKSHRLRSAKTTLGIIGNVHSVVEAYLDVFCERESEFVDPILNRLRDPDNALYLLLRHSTKKWPLRAPVINNPEFCNLLHLKFILPCFNSNLLVNIIEKCHILQVLILQIDKEEPSPLGACELQSTTVPKCLKSHLTYIHIEGYQGLEEELTFAEYILLNGLVLKTMLIFVDISMDITNKYRSLKRLTRAPKGSEMCQLEFDADGSP