Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062537.t1 | XP_003628587.2 | 59.4 | 463 | 155 | 8 | 6 | 453 | 472 | 916 | 9.30E-135 | 490.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062537.t1 | Q56XS8 | 24.9 | 466 | 284 | 18 | 23 | 445 | 10 | 452 | 3.6e-18 | 94.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062537.t1 | G7LEM0 | 56.4 | 486 | 162 | 9 | 6 | 453 | 9 | 482 | 2.6e-131 | 478.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062537.t1 | MTR_8g062300 | 56.478 | 494 | 162 | 10 | 1 | 453 | 1 | 482 | 9.56e-172 | 491 |
MS.gene062537.t1 | MTR_8g062080 | 55.940 | 463 | 181 | 9 | 1 | 453 | 1 | 450 | 7.52e-163 | 467 |
MS.gene062537.t1 | MTR_8g070950 | 56.596 | 470 | 154 | 11 | 1 | 452 | 1 | 438 | 6.63e-162 | 464 |
MS.gene062537.t1 | MTR_8g062310 | 52.784 | 449 | 186 | 7 | 1 | 448 | 5 | 428 | 6.67e-152 | 439 |
MS.gene062537.t1 | MTR_8g062010 | 55.257 | 447 | 162 | 10 | 23 | 452 | 9 | 434 | 9.47e-152 | 438 |
MS.gene062537.t1 | MTR_8g469020 | 49.787 | 470 | 177 | 13 | 22 | 452 | 6 | 455 | 3.74e-138 | 404 |
MS.gene062537.t1 | MTR_8g058965 | 48.347 | 484 | 187 | 12 | 9 | 453 | 2 | 461 | 1.41e-130 | 385 |
MS.gene062537.t1 | MTR_4g050250 | 47.178 | 443 | 162 | 13 | 1 | 394 | 1 | 420 | 1.87e-110 | 333 |
MS.gene062537.t1 | MTR_8g467790 | 45.098 | 408 | 145 | 12 | 23 | 402 | 148 | 504 | 1.22e-98 | 305 |
MS.gene062537.t1 | MTR_8g468810 | 38.969 | 485 | 237 | 15 | 1 | 448 | 1 | 463 | 1.43e-86 | 272 |
MS.gene062537.t1 | MTR_8g062270 | 38.229 | 463 | 229 | 14 | 20 | 447 | 13 | 453 | 3.31e-81 | 258 |
MS.gene062537.t1 | MTR_2g083840 | 39.651 | 459 | 224 | 12 | 22 | 448 | 20 | 457 | 3.32e-80 | 256 |
MS.gene062537.t1 | MTR_2g086020 | 83.448 | 145 | 24 | 0 | 308 | 452 | 175 | 319 | 4.19e-75 | 238 |
MS.gene062537.t1 | MTR_2g086020 | 60.959 | 146 | 49 | 2 | 49 | 190 | 1 | 142 | 7.69e-48 | 167 |
MS.gene062537.t1 | MTR_4g032730 | 36.456 | 491 | 234 | 15 | 9 | 447 | 2 | 466 | 5.01e-75 | 243 |
MS.gene062537.t1 | MTR_8g058970 | 36.926 | 501 | 236 | 19 | 3 | 448 | 2 | 477 | 4.14e-72 | 235 |
MS.gene062537.t1 | MTR_8g467800 | 38.608 | 474 | 230 | 17 | 8 | 448 | 8 | 453 | 6.04e-72 | 234 |
MS.gene062537.t1 | MTR_8g468840 | 36.752 | 468 | 223 | 15 | 21 | 446 | 12 | 448 | 4.21e-70 | 229 |
MS.gene062537.t1 | MTR_8g014260 | 38.731 | 457 | 228 | 20 | 23 | 448 | 16 | 451 | 1.54e-69 | 228 |
MS.gene062537.t1 | MTR_8g468760 | 36.443 | 461 | 226 | 17 | 10 | 447 | 2 | 418 | 2.52e-63 | 211 |
MS.gene062537.t1 | MTR_8g468810 | 38.931 | 393 | 183 | 14 | 1 | 358 | 1 | 371 | 3.77e-63 | 209 |
MS.gene062537.t1 | MTR_5g092960 | 33.895 | 475 | 256 | 12 | 11 | 447 | 7 | 461 | 6.60e-63 | 211 |
MS.gene062537.t1 | MTR_8g445780 | 36.235 | 425 | 212 | 16 | 1 | 401 | 1 | 390 | 4.82e-57 | 193 |
MS.gene062537.t1 | MTR_8g468810 | 41.158 | 311 | 141 | 11 | 1 | 281 | 1 | 299 | 6.16e-54 | 183 |
MS.gene062537.t1 | MTR_8g468810 | 40.836 | 311 | 142 | 11 | 1 | 281 | 1 | 299 | 6.80e-54 | 183 |
MS.gene062537.t1 | MTR_8g468810 | 41.158 | 311 | 141 | 11 | 1 | 281 | 1 | 299 | 1.21e-53 | 183 |
MS.gene062537.t1 | MTR_8g014160 | 34.273 | 461 | 210 | 16 | 14 | 448 | 32 | 425 | 7.85e-51 | 178 |
MS.gene062537.t1 | MTR_5g092960 | 32.984 | 382 | 205 | 10 | 11 | 358 | 7 | 371 | 1.97e-40 | 149 |
MS.gene062537.t1 | MTR_4g024710 | 35.880 | 301 | 158 | 11 | 166 | 448 | 64 | 347 | 5.68e-40 | 147 |
MS.gene062537.t1 | MTR_8g467800 | 39.130 | 299 | 144 | 13 | 8 | 281 | 8 | 293 | 3.58e-35 | 134 |
MS.gene062537.t1 | MTR_8g077460 | 47.651 | 149 | 74 | 4 | 301 | 448 | 230 | 375 | 4.48e-34 | 131 |
MS.gene062537.t1 | MTR_8g077460 | 36.946 | 203 | 110 | 7 | 23 | 212 | 10 | 207 | 3.18e-23 | 101 |
MS.gene062537.t1 | MTR_8g014210 | 39.908 | 218 | 112 | 8 | 233 | 448 | 31 | 231 | 6.79e-32 | 122 |
MS.gene062537.t1 | MTR_3g099800 | 71.605 | 81 | 22 | 1 | 360 | 439 | 19 | 99 | 2.47e-30 | 113 |
MS.gene062537.t1 | MTR_7g098510 | 28.211 | 436 | 241 | 14 | 23 | 448 | 18 | 391 | 4.50e-29 | 118 |
MS.gene062537.t1 | MTR_4g024745 | 33.793 | 290 | 145 | 12 | 166 | 431 | 18 | 284 | 1.02e-26 | 109 |
MS.gene062537.t1 | MTR_1g041245 | 29.279 | 444 | 230 | 18 | 22 | 448 | 10 | 386 | 3.97e-26 | 109 |
MS.gene062537.t1 | MTR_5g021550 | 43.421 | 152 | 72 | 7 | 17 | 156 | 13 | 162 | 5.87e-25 | 100 |
MS.gene062537.t1 | MTR_5g008950 | 26.424 | 439 | 234 | 17 | 25 | 448 | 1 | 365 | 5.02e-23 | 100 |
MS.gene062537.t1 | MTR_3g107160 | 26.244 | 442 | 258 | 14 | 15 | 448 | 2 | 383 | 9.16e-23 | 100 |
MS.gene062537.t1 | MTR_8g014290 | 36.601 | 153 | 77 | 5 | 23 | 157 | 10 | 160 | 8.59e-21 | 89.4 |
MS.gene062537.t1 | MTR_7g026500 | 25.901 | 444 | 247 | 16 | 23 | 447 | 14 | 394 | 6.84e-20 | 91.7 |
MS.gene062537.t1 | MTR_7g098480 | 27.211 | 441 | 237 | 15 | 22 | 447 | 17 | 388 | 7.80e-20 | 92.0 |
MS.gene062537.t1 | MTR_3g107100 | 25.828 | 453 | 256 | 16 | 19 | 450 | 7 | 400 | 1.70e-19 | 90.5 |
MS.gene062537.t1 | MTR_7g098570 | 26.835 | 436 | 241 | 16 | 22 | 444 | 19 | 389 | 3.70e-19 | 90.1 |
MS.gene062537.t1 | MTR_7g115270 | 25.909 | 440 | 257 | 16 | 23 | 445 | 12 | 399 | 3.96e-19 | 89.4 |
MS.gene062537.t1 | MTR_5g080710 | 27.517 | 447 | 262 | 17 | 23 | 440 | 33 | 446 | 6.99e-19 | 89.4 |
MS.gene062537.t1 | MTR_2g007450 | 28.480 | 467 | 239 | 24 | 16 | 445 | 9 | 417 | 3.17e-18 | 87.0 |
MS.gene062537.t1 | MTR_5g084070 | 27.064 | 436 | 279 | 14 | 19 | 440 | 9 | 419 | 3.21e-18 | 87.0 |
MS.gene062537.t1 | MTR_7g033990 | 27.169 | 438 | 226 | 19 | 23 | 440 | 11 | 375 | 4.80e-18 | 86.3 |
MS.gene062537.t1 | MTR_1g085120 | 26.106 | 452 | 250 | 17 | 16 | 448 | 85 | 471 | 5.72e-18 | 86.7 |
MS.gene062537.t1 | MTR_5g073420 | 26.087 | 414 | 219 | 16 | 23 | 422 | 11 | 351 | 5.92e-18 | 85.9 |
MS.gene062537.t1 | MTR_1g085120 | 26.106 | 452 | 250 | 17 | 16 | 448 | 160 | 546 | 6.97e-18 | 86.7 |
MS.gene062537.t1 | MTR_7g056447 | 32.618 | 233 | 127 | 10 | 23 | 248 | 9 | 218 | 3.57e-17 | 82.0 |
MS.gene062537.t1 | MTR_6g040270 | 25.858 | 437 | 240 | 21 | 25 | 445 | 10 | 378 | 2.43e-16 | 80.9 |
MS.gene062537.t1 | MTR_7g055943 | 23.663 | 486 | 259 | 22 | 3 | 448 | 8 | 421 | 2.53e-16 | 81.3 |
MS.gene062537.t1 | MTR_7g032380 | 34.375 | 192 | 109 | 7 | 23 | 208 | 11 | 191 | 1.19e-15 | 78.6 |
MS.gene062537.t1 | MTR_4g024720 | 39.231 | 130 | 56 | 7 | 8 | 126 | 10 | 127 | 1.48e-15 | 75.9 |
MS.gene062537.t1 | MTR_3g036250 | 24.186 | 430 | 250 | 14 | 22 | 445 | 4 | 363 | 4.00e-15 | 77.0 |
MS.gene062537.t1 | MTR_3g107120 | 26.742 | 445 | 239 | 15 | 23 | 445 | 9 | 388 | 2.31e-14 | 75.1 |
MS.gene062537.t1 | MTR_4g098590 | 25.735 | 408 | 232 | 15 | 25 | 415 | 1 | 354 | 1.03e-13 | 72.8 |
MS.gene062537.t1 | MTR_8g014230 | 44.565 | 92 | 46 | 3 | 357 | 448 | 18 | 104 | 1.36e-13 | 67.0 |
MS.gene062537.t1 | MTR_3g040700 | 24.112 | 394 | 222 | 13 | 22 | 407 | 42 | 366 | 1.43e-13 | 72.8 |
MS.gene062537.t1 | MTR_6g022500 | 25.240 | 416 | 223 | 19 | 19 | 415 | 97 | 443 | 2.35e-13 | 72.4 |
MS.gene062537.t1 | MTR_3g052990 | 33.702 | 181 | 114 | 4 | 6 | 186 | 11 | 185 | 4.99e-13 | 71.2 |
MS.gene062537.t1 | MTR_0009s0080 | 25.185 | 405 | 226 | 15 | 28 | 415 | 23 | 367 | 5.35e-13 | 70.9 |
MS.gene062537.t1 | MTR_3g052940 | 32.597 | 181 | 116 | 4 | 6 | 186 | 11 | 185 | 1.42e-12 | 69.7 |
MS.gene062537.t1 | MTR_3g052940 | 32.597 | 181 | 116 | 4 | 6 | 186 | 11 | 185 | 1.69e-12 | 69.7 |
MS.gene062537.t1 | MTR_3g052940 | 32.597 | 181 | 116 | 4 | 6 | 186 | 11 | 185 | 1.70e-12 | 69.7 |
MS.gene062537.t1 | MTR_5g083890 | 25.170 | 441 | 240 | 16 | 23 | 430 | 6 | 389 | 1.96e-12 | 69.3 |
MS.gene062537.t1 | MTR_4g056030 | 25.806 | 465 | 271 | 18 | 18 | 442 | 4 | 434 | 1.96e-12 | 69.3 |
MS.gene062537.t1 | MTR_8g085430 | 32.512 | 203 | 107 | 9 | 22 | 208 | 10 | 198 | 2.07e-12 | 68.6 |
MS.gene062537.t1 | MTR_1g053025 | 25.397 | 441 | 255 | 20 | 23 | 445 | 2 | 386 | 4.02e-12 | 68.2 |
MS.gene062537.t1 | MTR_4g093690 | 29.902 | 204 | 125 | 8 | 19 | 214 | 14 | 207 | 4.04e-12 | 67.0 |
MS.gene062537.t1 | MTR_1g038710 | 25.858 | 437 | 256 | 19 | 23 | 417 | 19 | 429 | 4.85e-12 | 68.2 |
MS.gene062537.t1 | MTR_6g022360 | 23.218 | 435 | 262 | 16 | 19 | 447 | 39 | 407 | 1.43e-11 | 66.2 |
MS.gene062537.t1 | MTR_5g008920 | 32.821 | 195 | 108 | 8 | 23 | 208 | 9 | 189 | 2.36e-11 | 65.5 |
MS.gene062537.t1 | MTR_2g007500 | 31.472 | 197 | 101 | 7 | 22 | 208 | 13 | 185 | 2.89e-11 | 65.1 |
MS.gene062537.t1 | MTR_3g108150 | 34.184 | 196 | 99 | 11 | 23 | 208 | 13 | 188 | 3.49e-11 | 65.1 |
MS.gene062537.t1 | MTR_1g107385 | 24.528 | 477 | 259 | 22 | 9 | 445 | 5 | 420 | 6.53e-11 | 64.3 |
MS.gene062537.t1 | MTR_3g105060 | 27.778 | 198 | 131 | 7 | 23 | 217 | 14 | 202 | 8.65e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062537.t1 | AT1G78750 | 26.955 | 486 | 271 | 24 | 13 | 445 | 1 | 455 | 2.13e-20 | 94.0 |
MS.gene062537.t1 | AT1G78750 | 26.955 | 486 | 271 | 24 | 13 | 445 | 1 | 455 | 2.13e-20 | 94.0 |
MS.gene062537.t1 | AT5G56420 | 26.009 | 446 | 281 | 18 | 23 | 448 | 6 | 422 | 1.66e-18 | 87.8 |
MS.gene062537.t1 | AT5G56420 | 26.009 | 446 | 281 | 18 | 23 | 448 | 6 | 422 | 1.66e-18 | 87.8 |
MS.gene062537.t1 | AT5G56420 | 26.009 | 446 | 281 | 18 | 23 | 448 | 6 | 422 | 1.66e-18 | 87.8 |
MS.gene062537.t1 | AT1G32375 | 27.617 | 449 | 274 | 18 | 23 | 448 | 2 | 422 | 3.33e-18 | 87.0 |
MS.gene062537.t1 | AT1G32375 | 27.617 | 449 | 274 | 18 | 23 | 448 | 2 | 422 | 3.33e-18 | 87.0 |
MS.gene062537.t1 | AT1G13780 | 25.977 | 435 | 258 | 18 | 23 | 415 | 10 | 422 | 1.93e-17 | 84.7 |
MS.gene062537.t1 | AT5G53635 | 26.872 | 454 | 271 | 18 | 25 | 447 | 2 | 425 | 1.95e-17 | 84.7 |
MS.gene062537.t1 | AT4G26340 | 27.912 | 455 | 262 | 17 | 23 | 448 | 2 | 419 | 1.50e-16 | 82.0 |
MS.gene062537.t1 | AT1G78760 | 24.895 | 474 | 290 | 20 | 13 | 449 | 1 | 445 | 3.37e-16 | 80.9 |
MS.gene062537.t1 | AT4G13985 | 24.380 | 484 | 285 | 21 | 10 | 445 | 6 | 456 | 1.17e-15 | 79.3 |
MS.gene062537.t1 | AT1G66290 | 24.628 | 471 | 285 | 19 | 9 | 445 | 16 | 450 | 1.65e-15 | 79.0 |
MS.gene062537.t1 | AT1G51370 | 25.734 | 443 | 276 | 19 | 23 | 443 | 19 | 430 | 1.96e-15 | 78.6 |
MS.gene062537.t1 | AT5G56440 | 27.174 | 460 | 268 | 18 | 23 | 447 | 2 | 429 | 3.30e-15 | 77.8 |
MS.gene062537.t1 | AT5G18770 | 25.490 | 459 | 285 | 16 | 23 | 446 | 24 | 460 | 1.47e-14 | 76.3 |
MS.gene062537.t1 | AT1G16930 | 25.847 | 472 | 269 | 21 | 22 | 448 | 14 | 449 | 5.07e-14 | 74.3 |
MS.gene062537.t1 | AT1G16930 | 25.847 | 472 | 269 | 21 | 22 | 448 | 14 | 449 | 5.07e-14 | 74.3 |
MS.gene062537.t1 | AT1G16930 | 25.847 | 472 | 269 | 21 | 22 | 448 | 14 | 449 | 5.07e-14 | 74.3 |
MS.gene062537.t1 | AT1G66320 | 26.160 | 474 | 274 | 21 | 11 | 445 | 18 | 454 | 5.55e-14 | 74.3 |
MS.gene062537.t1 | AT4G09920 | 31.959 | 194 | 115 | 7 | 23 | 210 | 2 | 184 | 6.60e-14 | 72.4 |
MS.gene062537.t1 | AT4G09920 | 31.959 | 194 | 115 | 7 | 23 | 210 | 2 | 184 | 6.60e-14 | 72.4 |
MS.gene062537.t1 | AT4G09920 | 31.959 | 194 | 115 | 7 | 23 | 210 | 2 | 184 | 6.60e-14 | 72.4 |
MS.gene062537.t1 | AT4G09920 | 31.959 | 194 | 115 | 7 | 23 | 210 | 2 | 184 | 7.10e-14 | 72.8 |
MS.gene062537.t1 | AT4G09920 | 31.959 | 194 | 115 | 7 | 23 | 210 | 2 | 184 | 7.10e-14 | 72.8 |
MS.gene062537.t1 | AT1G69630 | 26.068 | 468 | 279 | 20 | 10 | 440 | 6 | 443 | 7.18e-14 | 73.9 |
MS.gene062537.t1 | AT5G53840 | 25.435 | 460 | 296 | 18 | 9 | 445 | 2 | 437 | 8.46e-14 | 73.6 |
MS.gene062537.t1 | AT2G26030 | 26.022 | 465 | 277 | 21 | 23 | 445 | 4 | 443 | 1.28e-13 | 73.2 |
MS.gene062537.t1 | AT3G59200 | 32.558 | 215 | 119 | 11 | 23 | 224 | 7 | 208 | 1.97e-13 | 72.0 |
MS.gene062537.t1 | AT5G27750 | 25.055 | 451 | 274 | 16 | 23 | 427 | 5 | 437 | 3.21e-13 | 71.6 |
MS.gene062537.t1 | AT3G59200 | 32.558 | 215 | 119 | 11 | 23 | 224 | 7 | 208 | 3.28e-13 | 72.0 |
MS.gene062537.t1 | AT2G26030 | 26.395 | 466 | 269 | 23 | 23 | 445 | 4 | 438 | 3.74e-13 | 71.6 |
MS.gene062537.t1 | AT2G26030 | 26.395 | 466 | 269 | 23 | 23 | 445 | 4 | 438 | 3.74e-13 | 71.6 |
MS.gene062537.t1 | AT5G22720 | 26.471 | 476 | 265 | 21 | 23 | 447 | 23 | 464 | 6.31e-13 | 70.9 |
MS.gene062537.t1 | AT1G13780 | 30.455 | 220 | 119 | 11 | 23 | 224 | 10 | 213 | 8.66e-13 | 69.7 |
MS.gene062537.t1 | AT4G15060 | 26.303 | 422 | 238 | 19 | 7 | 394 | 11 | 393 | 1.10e-12 | 70.1 |
MS.gene062537.t1 | AT5G44960 | 28.337 | 427 | 222 | 21 | 23 | 413 | 5 | 383 | 1.19e-12 | 69.7 |
MS.gene062537.t1 | AT5G50270 | 26.056 | 426 | 249 | 12 | 23 | 415 | 2 | 394 | 1.60e-12 | 69.3 |
MS.gene062537.t1 | AT5G44950 | 25.108 | 462 | 266 | 19 | 23 | 439 | 4 | 430 | 2.22e-12 | 68.9 |
MS.gene062537.t1 | AT1G55660 | 25.708 | 459 | 293 | 20 | 20 | 447 | 50 | 491 | 2.32e-12 | 69.3 |
MS.gene062537.t1 | AT3G58940 | 30.806 | 211 | 110 | 9 | 23 | 210 | 2 | 199 | 2.59e-12 | 69.3 |
MS.gene062537.t1 | AT3G58940 | 30.806 | 211 | 110 | 9 | 23 | 210 | 2 | 199 | 2.59e-12 | 69.3 |
MS.gene062537.t1 | AT3G49030 | 27.354 | 446 | 283 | 21 | 23 | 450 | 21 | 443 | 1.13e-11 | 67.0 |
MS.gene062537.t1 | AT1G51370 | 30.928 | 194 | 111 | 8 | 23 | 211 | 19 | 194 | 1.67e-11 | 65.9 |
MS.gene062537.t1 | AT1G51370 | 30.928 | 194 | 111 | 8 | 23 | 211 | 19 | 194 | 2.79e-11 | 65.5 |
MS.gene062537.t1 | AT1G49610 | 27.536 | 207 | 113 | 6 | 11 | 195 | 6 | 197 | 3.36e-11 | 65.1 |
MS.gene062537.t1 | AT5G53640 | 29.665 | 209 | 131 | 8 | 8 | 213 | 6 | 201 | 4.00e-11 | 63.2 |
MS.gene062537.t1 | AT3G26922 | 27.170 | 265 | 171 | 10 | 14 | 274 | 7 | 253 | 4.10e-11 | 64.3 |
MS.gene062537.t1 | AT3G26922 | 27.170 | 265 | 171 | 10 | 14 | 274 | 7 | 253 | 4.10e-11 | 64.3 |
MS.gene062537.t1 | AT5G35995 | 29.289 | 239 | 134 | 9 | 23 | 254 | 5 | 215 | 5.09e-11 | 65.1 |
MS.gene062537.t1 | AT5G35995 | 29.289 | 239 | 134 | 9 | 23 | 254 | 5 | 215 | 5.09e-11 | 65.1 |
MS.gene062537.t1 | AT5G56810 | 28.139 | 462 | 272 | 23 | 12 | 445 | 2 | 431 | 6.48e-11 | 64.7 |
Find 109 sgRNAs with CRISPR-Local
Find 127 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCAATTTCTTCTTCTGCTTT+TGG | 0.217119 | 8.1:+44430572 | None:intergenic |
CCACTCAACTTCGTTCAAAA+AGG | 0.237370 | 8.1:-44430378 | MS.gene062537:CDS |
GCCAACTCATGCCCCTGTTC+TGG | 0.268203 | 8.1:-44429467 | MS.gene062537:CDS |
TGATGTAAATCGCGAAATTC+AGG | 0.289569 | 8.1:+44429439 | None:intergenic |
CATTGTTGCGACGGAAGTTC+TGG | 0.309789 | 8.1:+44430466 | None:intergenic |
GACCCAGTTGTATCTTCTTA+AGG | 0.337539 | 8.1:-44428929 | None:intergenic |
TGTTGGTAACTTTCACAGTA+TGG | 0.341967 | 8.1:-44429735 | MS.gene062537:CDS |
TTCTAATACTGCAGTCTTCA+CGG | 0.375556 | 8.1:-44430028 | MS.gene062537:intron |
CTCGGATGAGGTTGAGAATA+GGG | 0.385948 | 8.1:+44429663 | None:intergenic |
TCAAGGACTTGAAGATGAAT+TGG | 0.403742 | 8.1:-44429101 | MS.gene062537:CDS |
TATCTCTGGCTGCCCTAGGC+TGG | 0.405016 | 8.1:-44429891 | MS.gene062537:CDS |
GAATTAGTTTCCCTTATCTC+TGG | 0.405102 | 8.1:-44429905 | MS.gene062537:CDS |
ATGCTTCAACTCAAATCTTC+TGG | 0.414841 | 8.1:-44429398 | MS.gene062537:CDS |
CTGACCTATGTTCACATAGA+AGG | 0.414878 | 8.1:-44429127 | MS.gene062537:CDS |
TCACCTTAAGAAGATACAAC+TGG | 0.418927 | 8.1:+44428926 | None:intergenic |
CCTAGGGCAGCCAGAGATAA+GGG | 0.428957 | 8.1:+44429895 | None:intergenic |
GAAAGTCGAAGTCGAAGATC+TGG | 0.433372 | 8.1:+44430402 | None:intergenic |
CTCCTAGATATCTTCATCTC+TGG | 0.433430 | 8.1:-44430433 | MS.gene062537:CDS |
CTTCAGTGATGGAAAATAAA+CGG | 0.433476 | 8.1:+44429964 | None:intergenic |
CTCTTAATCGTTTGAGAGAA+CGG | 0.434146 | 8.1:+44428990 | None:intergenic |
TTGCGACGGAAGTTCTGGTT+GGG | 0.435631 | 8.1:+44430471 | None:intergenic |
AATTCAGGATAATCCAGAAC+AGG | 0.435810 | 8.1:+44429454 | None:intergenic |
TTCGAATGTCGCGGGATTTG+CGG | 0.439604 | 8.1:+44430324 | None:intergenic |
CCCTTATCTCTGGCTGCCCT+AGG | 0.444881 | 8.1:-44429895 | MS.gene062537:CDS |
TTGGGAGGAAGGACATGATA+TGG | 0.449100 | 8.1:+44430489 | None:intergenic |
CGCTTCTGTCATCTCGGATG+AGG | 0.454440 | 8.1:+44429651 | None:intergenic |
GTCTCTCGGCGAAGATATTG+TGG | 0.456589 | 8.1:-44429936 | MS.gene062537:CDS |
ACTTACTTTAATATAAATGA+AGG | 0.456907 | 8.1:-44429776 | MS.gene062537:CDS |
TTCCAGAGATGAAGATATCT+AGG | 0.456977 | 8.1:+44430431 | None:intergenic |
AGTCCAAGTGAGATCGTCAT+TGG | 0.462467 | 8.1:+44429796 | None:intergenic |
GAAGAAATTGACGGCGGAGG+AGG | 0.465548 | 8.1:-44430560 | MS.gene062537:CDS |
GGAAGGTTTCTCGAGAACTT+TGG | 0.472309 | 8.1:+44429820 | None:intergenic |
ACCATTGAGAACATGGCAAC+CGG | 0.478521 | 8.1:-44429185 | MS.gene062537:CDS |
CAACTGGGTCAAATTTAAGT+TGG | 0.482494 | 8.1:+44428942 | None:intergenic |
CCTCCAATGACGATCTCACT+TGG | 0.486462 | 8.1:-44429799 | MS.gene062537:CDS |
GCCTAGGGCAGCCAGAGATA+AGG | 0.486530 | 8.1:+44429894 | None:intergenic |
AAGATAGAGTTGTTGAAGGT+GGG | 0.486842 | 8.1:+44430214 | None:intergenic |
ACATGCAAAGTTTCCAGCCT+AGG | 0.487752 | 8.1:+44429878 | None:intergenic |
TCTCGGATGAGGTTGAGAAT+AGG | 0.495111 | 8.1:+44429662 | None:intergenic |
TGCCATGTTCTCAATGGTAG+TGG | 0.499626 | 8.1:+44429190 | None:intergenic |
GATTTGAGTTGAAGCATGGA+AGG | 0.506598 | 8.1:+44429404 | None:intergenic |
ACGTGGATTCTTGCTGCCAT+TGG | 0.513966 | 8.1:-44430239 | MS.gene062537:CDS |
TTGTTGAAGGTGGGGTCCAA+TGG | 0.515637 | 8.1:+44430223 | None:intergenic |
GCACTAACCTCCTTTCCCTC+AGG | 0.516291 | 8.1:-44430142 | MS.gene062537:intron |
GGAAGTTCTGGTTGGGAGGA+AGG | 0.519935 | 8.1:+44430478 | None:intergenic |
GTTCACATAGAAGGATATCA+AGG | 0.520078 | 8.1:-44429118 | MS.gene062537:CDS |
CTTCTATGTGAACATAGGTC+AGG | 0.522459 | 8.1:+44429128 | None:intergenic |
GAGGCGATGACCTCACCGAC+AGG | 0.523086 | 8.1:-44430541 | MS.gene062537:CDS |
GAAATTCGCTTCTGTCATCT+CGG | 0.525450 | 8.1:+44429645 | None:intergenic |
TACAAAGATAGAGTTGTTGA+AGG | 0.530392 | 8.1:+44430210 | None:intergenic |
GTTGCGACGGAAGTTCTGGT+TGG | 0.533913 | 8.1:+44430470 | None:intergenic |
AAAGATAGAGTTGTTGAAGG+TGG | 0.535343 | 8.1:+44430213 | None:intergenic |
TCAGAAACTGTTATTGACTC+CGG | 0.543380 | 8.1:+44429166 | None:intergenic |
CATGCAAAGTTTCCAGCCTA+GGG | 0.543778 | 8.1:+44429879 | None:intergenic |
ATATCCTTCTATGTGAACAT+AGG | 0.544669 | 8.1:+44429123 | None:intergenic |
ATAAGGGAAACTAATTCAGT+TGG | 0.544720 | 8.1:+44429911 | None:intergenic |
CGCTGAATCCACGATGGCGG+AGG | 0.546316 | 8.1:-44430603 | None:intergenic |
GAAGAAGAAATTGACGGCGG+AGG | 0.547881 | 8.1:-44430563 | MS.gene062537:CDS |
CCAAGTGAGATCGTCATTGG+AGG | 0.548795 | 8.1:+44429799 | None:intergenic |
TCCGGTTGCCATGTTCTCAA+TGG | 0.550198 | 8.1:+44429184 | None:intergenic |
GCAAAAGTTACCTGAGGGAA+AGG | 0.550738 | 8.1:+44430132 | None:intergenic |
ATAGATCCTCATCATCGTCT+AGG | 0.550888 | 8.1:+44429612 | None:intergenic |
AGAAGATTTGAGTTGAAGCA+TGG | 0.552646 | 8.1:+44429400 | None:intergenic |
GAAAATAAACGGAGTTTGCA+CGG | 0.554058 | 8.1:+44429975 | None:intergenic |
CACCTTAAGAAGATACAACT+GGG | 0.558337 | 8.1:+44428927 | None:intergenic |
ATATGGCATAGTACAGAGTC+CGG | 0.561225 | 8.1:+44430506 | None:intergenic |
AACCACTACCATTGAGAACA+TGG | 0.563418 | 8.1:-44429192 | MS.gene062537:CDS |
TCCAGAACAGGGGCATGAGT+TGG | 0.570030 | 8.1:+44429466 | None:intergenic |
CGGTAGAGTGCTCAGCCTGT+CGG | 0.570238 | 8.1:+44430526 | None:intergenic |
CGACAGGCTGAGCACTCTAC+CGG | 0.570912 | 8.1:-44430525 | MS.gene062537:CDS |
TGGCACATGTCAGAGCCCCT+TGG | 0.573859 | 8.1:+44428962 | None:intergenic |
TACAAATTCAGTTTCAGCCA+CGG | 0.574682 | 8.1:+44429688 | None:intergenic |
GCAAATCCCGCGACATTCGA+AGG | 0.578368 | 8.1:-44430322 | MS.gene062537:CDS |
TCTCTCGGCGAAGATATTGT+GGG | 0.579344 | 8.1:-44429935 | MS.gene062537:CDS |
AGATAGAGTTGTTGAAGGTG+GGG | 0.580102 | 8.1:+44430215 | None:intergenic |
TCTTCACGGTTCAATCGAAA+CGG | 0.582481 | 8.1:-44430014 | MS.gene062537:CDS |
ACGGAACCTTCGAATGTCGC+GGG | 0.584834 | 8.1:+44430316 | None:intergenic |
CTATGTGAACATAGGTCAGG+TGG | 0.588925 | 8.1:+44429131 | None:intergenic |
GACGAGACTCATTGTTGCGA+CGG | 0.590038 | 8.1:+44430457 | None:intergenic |
AGAGACAATATCTTCAGTGA+TGG | 0.590680 | 8.1:+44429953 | None:intergenic |
CGACGGAAGTTCTGGTTGGG+AGG | 0.592790 | 8.1:+44430474 | None:intergenic |
GTGAGATCGTCATTGGAGGA+AGG | 0.596129 | 8.1:+44429803 | None:intergenic |
AAAGCAGAAGAAGAAATTGA+CGG | 0.596467 | 8.1:-44430569 | MS.gene062537:CDS |
CTGAGTTGTAACTCATCGCG+TGG | 0.606212 | 8.1:+44430272 | None:intergenic |
GACAGAAGCGAATTTCATAA+CGG | 0.611584 | 8.1:-44429638 | MS.gene062537:CDS |
GATCCTCATCATCGTCTAGG+AGG | 0.620289 | 8.1:+44429615 | None:intergenic |
GAGTGCTCAGCCTGTCGGTG+AGG | 0.620743 | 8.1:+44430531 | None:intergenic |
TCACTGAAGATATTGTCTCT+CGG | 0.622255 | 8.1:-44429950 | MS.gene062537:CDS |
TAGATATCTTCATCTCTGGA+AGG | 0.622526 | 8.1:-44430429 | MS.gene062537:CDS |
CGGCCTCCTAGACGATGATG+AGG | 0.623457 | 8.1:-44429618 | MS.gene062537:CDS |
GTTGCGTCATTCGACATCAA+AGG | 0.623983 | 8.1:-44429582 | MS.gene062537:intron |
CAATTGATGAAGAGTGAACG+AGG | 0.626927 | 8.1:+44430164 | None:intergenic |
AAAGTTACCTGAGGGAAAGG+AGG | 0.628632 | 8.1:+44430135 | None:intergenic |
GACGGAACCTTCGAATGTCG+CGG | 0.632919 | 8.1:+44430315 | None:intergenic |
TGGTAACTTTCACAGTATGG+TGG | 0.637517 | 8.1:-44429732 | MS.gene062537:CDS |
ATTCAGGATAATCCAGAACA+GGG | 0.639651 | 8.1:+44429455 | None:intergenic |
TATGTGAACATAGGTCAGGT+GGG | 0.643030 | 8.1:+44429132 | None:intergenic |
TCTCATAATTCAGAGCAACA+AGG | 0.643040 | 8.1:-44429341 | MS.gene062537:intron |
CATCAAATGTGAGAGTGAGA+CGG | 0.650223 | 8.1:+44430297 | None:intergenic |
AACGATTAAGAGACAAACCA+AGG | 0.651423 | 8.1:-44428979 | MS.gene062537:CDS |
AACTCAGGAATGCTGAAACG+TGG | 0.660563 | 8.1:-44430256 | MS.gene062537:CDS |
ACGATTAAGAGACAAACCAA+GGG | 0.664610 | 8.1:-44428978 | MS.gene062537:CDS |
TTCAATGAACAAAACAGACA+AGG | 0.679515 | 8.1:-44429014 | MS.gene062537:CDS |
CACGCGATGAGTTACAACTC+AGG | 0.685874 | 8.1:-44430271 | MS.gene062537:CDS |
TTATGAGAACTTGAAGCATG+TGG | 0.695487 | 8.1:+44429356 | None:intergenic |
CGATTAAGAGACAAACCAAG+GGG | 0.721773 | 8.1:-44428977 | MS.gene062537:CDS |
TTCAGGATAATCCAGAACAG+GGG | 0.721899 | 8.1:+44429456 | None:intergenic |
GCAGAAGAAGAAATTGACGG+CGG | 0.742332 | 8.1:-44430566 | MS.gene062537:CDS |
AATTGATGAAGAGTGAACGA+GGG | 0.761342 | 8.1:+44430165 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTTAATTCAAACATTCTT+TGG | - | chr8.1:44430218-44430237 | MS.gene062537:CDS | 15.0% |
!! | ACTTACTTTAATATAAATGA+AGG | - | chr8.1:44429745-44429764 | MS.gene062537:CDS | 15.0% |
!!! | AAATGAAGGATGTTTTAAAT+TGG | - | chr8.1:44429759-44429778 | MS.gene062537:CDS | 20.0% |
!!! | AATGAAGGATGTTTTAAATT+GGG | - | chr8.1:44429760-44429779 | MS.gene062537:CDS | 20.0% |
! | TAATTCAAACATTCTTTGGT+AGG | - | chr8.1:44430222-44430241 | MS.gene062537:CDS | 25.0% |
!! | CATTCGTTGAATATATTTTG+AGG | - | chr8.1:44430443-44430462 | MS.gene062537:CDS | 25.0% |
!!! | ACACATATATTTTTGAGTCA+CGG | - | chr8.1:44430278-44430297 | MS.gene062537:CDS | 25.0% |
!!! | ATGTTTTTACATGTGTAGTT+TGG | - | chr8.1:44429986-44430005 | MS.gene062537:CDS | 25.0% |
!!! | GTTGAATATATTTTGAGGAA+CGG | - | chr8.1:44430448-44430467 | MS.gene062537:CDS | 25.0% |
AAAGCAGAAGAAGAAATTGA+CGG | - | chr8.1:44428952-44428971 | MS.gene062537:CDS | 30.0% | |
ATAAGGGAAACTAATTCAGT+TGG | + | chr8.1:44429613-44429632 | None:intergenic | 30.0% | |
ATATCCTTCTATGTGAACAT+AGG | + | chr8.1:44430401-44430420 | None:intergenic | 30.0% | |
TACAAAGATAGAGTTGTTGA+AGG | + | chr8.1:44429314-44429333 | None:intergenic | 30.0% | |
TTCAATGAACAAAACAGACA+AGG | - | chr8.1:44430507-44430526 | MS.gene062537:CDS | 30.0% | |
! | CTTCAGTGATGGAAAATAAA+CGG | + | chr8.1:44429560-44429579 | None:intergenic | 30.0% |
! | TCAATTTCTTCTTCTGCTTT+TGG | + | chr8.1:44428952-44428971 | None:intergenic | 30.0% |
!! | TGTTTTAAATTGGGCATTGT+TGG | - | chr8.1:44429769-44429788 | MS.gene062537:CDS | 30.0% |
!!! | TATATTTTTGAGTCACGGTA+TGG | - | chr8.1:44430283-44430302 | MS.gene062537:CDS | 30.0% |
AAAGATAGAGTTGTTGAAGG+TGG | + | chr8.1:44429311-44429330 | None:intergenic | 35.0% | |
AACGATTAAGAGACAAACCA+AGG | - | chr8.1:44430542-44430561 | MS.gene062537:CDS | 35.0% | |
AAGATAGAGTTGTTGAAGGT+GGG | + | chr8.1:44429310-44429329 | None:intergenic | 35.0% | |
AATTCAGGATAATCCAGAAC+AGG | + | chr8.1:44430070-44430089 | None:intergenic | 35.0% | |
AATTGATGAAGAGTGAACGA+GGG | + | chr8.1:44429359-44429378 | None:intergenic | 35.0% | |
ACGATTAAGAGACAAACCAA+GGG | - | chr8.1:44430543-44430562 | MS.gene062537:CDS | 35.0% | |
AGAGACAATATCTTCAGTGA+TGG | + | chr8.1:44429571-44429590 | None:intergenic | 35.0% | |
ATGCTTCAACTCAAATCTTC+TGG | - | chr8.1:44430123-44430142 | MS.gene062537:intron | 35.0% | |
ATTCAGGATAATCCAGAACA+GGG | + | chr8.1:44430069-44430088 | None:intergenic | 35.0% | |
CAACTGGGTCAAATTTAAGT+TGG | + | chr8.1:44430582-44430601 | None:intergenic | 35.0% | |
CTCTTAATCGTTTGAGAGAA+CGG | + | chr8.1:44430534-44430553 | None:intergenic | 35.0% | |
GAAAATAAACGGAGTTTGCA+CGG | + | chr8.1:44429549-44429568 | None:intergenic | 35.0% | |
GACAGAAGCGAATTTCATAA+CGG | - | chr8.1:44429883-44429902 | MS.gene062537:CDS | 35.0% | |
GTTCACATAGAAGGATATCA+AGG | - | chr8.1:44430403-44430422 | MS.gene062537:CDS | 35.0% | |
TACAAATTCAGTTTCAGCCA+CGG | + | chr8.1:44429836-44429855 | None:intergenic | 35.0% | |
TACACGATAACAACAAGTGA+TGG | + | chr8.1:44430025-44430044 | None:intergenic | 35.0% | |
TAGATATCTTCATCTCTGGA+AGG | - | chr8.1:44429092-44429111 | MS.gene062537:CDS | 35.0% | |
TCAAGGACTTGAAGATGAAT+TGG | - | chr8.1:44430420-44430439 | MS.gene062537:CDS | 35.0% | |
TCACTGAAGATATTGTCTCT+CGG | - | chr8.1:44429571-44429590 | MS.gene062537:intron | 35.0% | |
TCTCATAATTCAGAGCAACA+AGG | - | chr8.1:44430180-44430199 | MS.gene062537:CDS | 35.0% | |
TGATGTAAATCGCGAAATTC+AGG | + | chr8.1:44430085-44430104 | None:intergenic | 35.0% | |
TTATGAGAACTTGAAGCATG+TGG | + | chr8.1:44430168-44430187 | None:intergenic | 35.0% | |
TTCCAGAGATGAAGATATCT+AGG | + | chr8.1:44429093-44429112 | None:intergenic | 35.0% | |
TTCTAATACTGCAGTCTTCA+CGG | - | chr8.1:44429493-44429512 | MS.gene062537:intron | 35.0% | |
! | GAATTAGTTTCCCTTATCTC+TGG | - | chr8.1:44429616-44429635 | MS.gene062537:CDS | 35.0% |
!! | AGAAGATTTGAGTTGAAGCA+TGG | + | chr8.1:44430124-44430143 | None:intergenic | 35.0% |
!! | ATTTCTTCTTCTGCTTTTGG+TGG | + | chr8.1:44428949-44428968 | None:intergenic | 35.0% |
!! | TCAGAAACTGTTATTGACTC+CGG | + | chr8.1:44430358-44430377 | None:intergenic | 35.0% |
!! | TGTTGGTAACTTTCACAGTA+TGG | - | chr8.1:44429786-44429805 | MS.gene062537:CDS | 35.0% |
AACCACTACCATTGAGAACA+TGG | - | chr8.1:44430329-44430348 | MS.gene062537:CDS | 40.0% | |
AGATAGAGTTGTTGAAGGTG+GGG | + | chr8.1:44429309-44429328 | None:intergenic | 40.0% | |
ATAGATCCTCATCATCGTCT+AGG | + | chr8.1:44429912-44429931 | None:intergenic | 40.0% | |
ATATGGCATAGTACAGAGTC+CGG | + | chr8.1:44429018-44429037 | None:intergenic | 40.0% | |
CAATTGATGAAGAGTGAACG+AGG | + | chr8.1:44429360-44429379 | None:intergenic | 40.0% | |
CATCAAATGTGAGAGTGAGA+CGG | + | chr8.1:44429227-44429246 | None:intergenic | 40.0% | |
CATCTGCAAAAGTTACCTGA+GGG | + | chr8.1:44429397-44429416 | None:intergenic | 40.0% | |
CCACTCAACTTCGTTCAAAA+AGG | - | chr8.1:44429143-44429162 | MS.gene062537:CDS | 40.0% | |
CGATTAAGAGACAAACCAAG+GGG | - | chr8.1:44430544-44430563 | MS.gene062537:CDS | 40.0% | |
CTCCTAGATATCTTCATCTC+TGG | - | chr8.1:44429088-44429107 | MS.gene062537:CDS | 40.0% | |
CTGACCTATGTTCACATAGA+AGG | - | chr8.1:44430394-44430413 | MS.gene062537:CDS | 40.0% | |
CTTCTATGTGAACATAGGTC+AGG | + | chr8.1:44430396-44430415 | None:intergenic | 40.0% | |
GAAATTCGCTTCTGTCATCT+CGG | + | chr8.1:44429879-44429898 | None:intergenic | 40.0% | |
TATGTGAACATAGGTCAGGT+GGG | + | chr8.1:44430392-44430411 | None:intergenic | 40.0% | |
TCATCTGCAAAAGTTACCTG+AGG | + | chr8.1:44429398-44429417 | None:intergenic | 40.0% | |
TCTTCACGGTTCAATCGAAA+CGG | - | chr8.1:44429507-44429526 | MS.gene062537:intron | 40.0% | |
TGGTAACTTTCACAGTATGG+TGG | - | chr8.1:44429789-44429808 | MS.gene062537:CDS | 40.0% | |
TTCAGGATAATCCAGAACAG+GGG | + | chr8.1:44430068-44430087 | None:intergenic | 40.0% | |
! | CCTTTTTGAACGAAGTTGAG+TGG | + | chr8.1:44429146-44429165 | None:intergenic | 40.0% |
! | GTTTCTTGATGTCTTTTCCG+TGG | - | chr8.1:44429816-44429835 | MS.gene062537:CDS | 40.0% |
!! | GATTTGAGTTGAAGCATGGA+AGG | + | chr8.1:44430120-44430139 | None:intergenic | 40.0% |
AAAGTTACCTGAGGGAAAGG+AGG | + | chr8.1:44429389-44429408 | None:intergenic | 45.0% | |
AACTCAGGAATGCTGAAACG+TGG | - | chr8.1:44429265-44429284 | MS.gene062537:intron | 45.0% | |
ACATGCAAAGTTTCCAGCCT+AGG | + | chr8.1:44429646-44429665 | None:intergenic | 45.0% | |
ACCATTGAGAACATGGCAAC+CGG | - | chr8.1:44430336-44430355 | MS.gene062537:CDS | 45.0% | |
AGTCCAAGTGAGATCGTCAT+TGG | + | chr8.1:44429728-44429747 | None:intergenic | 45.0% | |
CATGCAAAGTTTCCAGCCTA+GGG | + | chr8.1:44429645-44429664 | None:intergenic | 45.0% | |
CTATGTGAACATAGGTCAGG+TGG | + | chr8.1:44430393-44430412 | None:intergenic | 45.0% | |
CTCGGATGAGGTTGAGAATA+GGG | + | chr8.1:44429861-44429880 | None:intergenic | 45.0% | |
GAAAGTCGAAGTCGAAGATC+TGG | + | chr8.1:44429122-44429141 | None:intergenic | 45.0% | |
GCAAAAGTTACCTGAGGGAA+AGG | + | chr8.1:44429392-44429411 | None:intergenic | 45.0% | |
GCAGAAGAAGAAATTGACGG+CGG | - | chr8.1:44428955-44428974 | MS.gene062537:CDS | 45.0% | |
GGAAGGTTTCTCGAGAACTT+TGG | + | chr8.1:44429704-44429723 | None:intergenic | 45.0% | |
GTTCCTCCTACAACCAACAA+GGG | + | chr8.1:44430312-44430331 | None:intergenic | 45.0% | |
GTTGCGTCATTCGACATCAA+AGG | - | chr8.1:44429939-44429958 | MS.gene062537:CDS | 45.0% | |
TCTCGGATGAGGTTGAGAAT+AGG | + | chr8.1:44429862-44429881 | None:intergenic | 45.0% | |
TCTCTCGGCGAAGATATTGT+GGG | - | chr8.1:44429586-44429605 | MS.gene062537:CDS | 45.0% | |
TGCCATGTTCTCAATGGTAG+TGG | + | chr8.1:44430334-44430353 | None:intergenic | 45.0% | |
TTGGGAGGAAGGACATGATA+TGG | + | chr8.1:44429035-44429054 | None:intergenic | 45.0% | |
TTGTTATCGTGTACGTGCAG+TGG | - | chr8.1:44430032-44430051 | MS.gene062537:intron | 45.0% | |
ACGTGGATTCTTGCTGCCAT+TGG | - | chr8.1:44429282-44429301 | MS.gene062537:intron | 50.0% | |
CACGCGATGAGTTACAACTC+AGG | - | chr8.1:44429250-44429269 | MS.gene062537:intron | 50.0% | |
CATTGTTGCGACGGAAGTTC+TGG | + | chr8.1:44429058-44429077 | None:intergenic | 50.0% | |
CCAAGTGAGATCGTCATTGG+AGG | + | chr8.1:44429725-44429744 | None:intergenic | 50.0% | |
CCTCCAATGACGATCTCACT+TGG | - | chr8.1:44429722-44429741 | MS.gene062537:CDS | 50.0% | |
CTGAGTTGTAACTCATCGCG+TGG | + | chr8.1:44429252-44429271 | None:intergenic | 50.0% | |
GAAGAAGAAATTGACGGCGG+AGG | - | chr8.1:44428958-44428977 | MS.gene062537:CDS | 50.0% | |
GACGAGACTCATTGTTGCGA+CGG | + | chr8.1:44429067-44429086 | None:intergenic | 50.0% | |
GATCCTCATCATCGTCTAGG+AGG | + | chr8.1:44429909-44429928 | None:intergenic | 50.0% | |
GGTTCCTCCTACAACCAACA+AGG | + | chr8.1:44430313-44430332 | None:intergenic | 50.0% | |
GTCTCTCGGCGAAGATATTG+TGG | - | chr8.1:44429585-44429604 | MS.gene062537:CDS | 50.0% | |
GTGAGATCGTCATTGGAGGA+AGG | + | chr8.1:44429721-44429740 | None:intergenic | 50.0% | |
TCCGGTTGCCATGTTCTCAA+TGG | + | chr8.1:44430340-44430359 | None:intergenic | 50.0% | |
TTCGAATGTCGCGGGATTTG+CGG | + | chr8.1:44429200-44429219 | None:intergenic | 50.0% | |
TTGTTGAAGGTGGGGTCCAA+TGG | + | chr8.1:44429301-44429320 | None:intergenic | 50.0% | |
! | TGGTGTCCCTTGTTGGTTGT+AGG | - | chr8.1:44430303-44430322 | MS.gene062537:CDS | 50.0% |
! | TGTCCCTTGTTGGTTGTAGG+AGG | - | chr8.1:44430306-44430325 | MS.gene062537:CDS | 50.0% |
! | TTGCGACGGAAGTTCTGGTT+GGG | + | chr8.1:44429053-44429072 | None:intergenic | 50.0% |
ACGGAACCTTCGAATGTCGC+GGG | + | chr8.1:44429208-44429227 | None:intergenic | 55.0% | |
CACGGTATGGTGTCCCTTGT+TGG | - | chr8.1:44430296-44430315 | MS.gene062537:CDS | 55.0% | |
CCTAGGGCAGCCAGAGATAA+GGG | + | chr8.1:44429629-44429648 | None:intergenic | 55.0% | |
CGCTTCTGTCATCTCGGATG+AGG | + | chr8.1:44429873-44429892 | None:intergenic | 55.0% | |
GAAGAAATTGACGGCGGAGG+AGG | - | chr8.1:44428961-44428980 | MS.gene062537:CDS | 55.0% | |
GACGGAACCTTCGAATGTCG+CGG | + | chr8.1:44429209-44429228 | None:intergenic | 55.0% | |
GCAAATCCCGCGACATTCGA+AGG | - | chr8.1:44429199-44429218 | MS.gene062537:CDS | 55.0% | |
GCACTAACCTCCTTTCCCTC+AGG | - | chr8.1:44429379-44429398 | MS.gene062537:CDS | 55.0% | |
! | GGAAGTTCTGGTTGGGAGGA+AGG | + | chr8.1:44429046-44429065 | None:intergenic | 55.0% |
! | GTTGCGACGGAAGTTCTGGT+TGG | + | chr8.1:44429054-44429073 | None:intergenic | 55.0% |
! | TCCAGAACAGGGGCATGAGT+TGG | + | chr8.1:44430058-44430077 | None:intergenic | 55.0% |
CCCTTATCTCTGGCTGCCCT+AGG | - | chr8.1:44429626-44429645 | MS.gene062537:CDS | 60.0% | |
CGACAGGCTGAGCACTCTAC+CGG | - | chr8.1:44428996-44429015 | MS.gene062537:CDS | 60.0% | |
CGGCCTCCTAGACGATGATG+AGG | - | chr8.1:44429903-44429922 | MS.gene062537:CDS | 60.0% | |
GCCAACTCATGCCCCTGTTC+TGG | - | chr8.1:44430054-44430073 | MS.gene062537:intron | 60.0% | |
GCCTAGGGCAGCCAGAGATA+AGG | + | chr8.1:44429630-44429649 | None:intergenic | 60.0% | |
TATCTCTGGCTGCCCTAGGC+TGG | - | chr8.1:44429630-44429649 | MS.gene062537:CDS | 60.0% | |
TGGCACATGTCAGAGCCCCT+TGG | + | chr8.1:44430562-44430581 | None:intergenic | 60.0% | |
! | CGACGGAAGTTCTGGTTGGG+AGG | + | chr8.1:44429050-44429069 | None:intergenic | 60.0% |
! | CGGTAGAGTGCTCAGCCTGT+CGG | + | chr8.1:44428998-44429017 | None:intergenic | 60.0% |
GAGGCGATGACCTCACCGAC+AGG | - | chr8.1:44428980-44428999 | MS.gene062537:CDS | 65.0% | |
GAGTGCTCAGCCTGTCGGTG+AGG | + | chr8.1:44428993-44429012 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 44428931 | 44430612 | 44428931 | ID=MS.gene062537 |
chr8.1 | mRNA | 44428931 | 44430612 | 44428931 | ID=MS.gene062537.t1;Parent=MS.gene062537 |
chr8.1 | exon | 44430143 | 44430612 | 44430143 | ID=MS.gene062537.t1.exon1;Parent=MS.gene062537.t1 |
chr8.1 | CDS | 44430143 | 44430612 | 44430143 | ID=cds.MS.gene062537.t1;Parent=MS.gene062537.t1 |
chr8.1 | exon | 44429583 | 44430036 | 44429583 | ID=MS.gene062537.t1.exon2;Parent=MS.gene062537.t1 |
chr8.1 | CDS | 44429583 | 44430036 | 44429583 | ID=cds.MS.gene062537.t1;Parent=MS.gene062537.t1 |
chr8.1 | exon | 44429342 | 44429491 | 44429342 | ID=MS.gene062537.t1.exon3;Parent=MS.gene062537.t1 |
chr8.1 | CDS | 44429342 | 44429491 | 44429342 | ID=cds.MS.gene062537.t1;Parent=MS.gene062537.t1 |
chr8.1 | exon | 44428931 | 44429218 | 44428931 | ID=MS.gene062537.t1.exon4;Parent=MS.gene062537.t1 |
chr8.1 | CDS | 44428931 | 44429218 | 44428931 | ID=cds.MS.gene062537.t1;Parent=MS.gene062537.t1 |
Gene Sequence |
Protein sequence |