AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene63111


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63111.t1 MTR_8g062310 85.714 441 55 4 1 441 1 433 0.0 751
MS.gene63111.t1 MTR_8g070950 57.837 453 157 8 6 441 4 439 5.23e-166 474
MS.gene63111.t1 MTR_8g062080 57.456 456 171 11 1 440 1 449 1.05e-162 466
MS.gene63111.t1 MTR_8g062010 58.237 431 160 7 25 440 9 434 1.78e-157 452
MS.gene63111.t1 MTR_8g062300 50.826 484 191 10 1 440 1 481 5.62e-145 422
MS.gene63111.t1 MTR_8g058965 54.746 453 165 12 24 440 12 460 2.76e-144 420
MS.gene63111.t1 MTR_8g469020 51.429 455 178 9 25 441 7 456 3.33e-143 417
MS.gene63111.t1 MTR_4g050250 50.469 426 161 13 1 382 1 420 6.74e-121 359
MS.gene63111.t1 MTR_8g467790 47.089 395 144 13 24 390 147 504 4.32e-94 293
MS.gene63111.t1 MTR_2g083840 39.168 457 241 12 8 436 10 457 5.36e-81 257
MS.gene63111.t1 MTR_8g468810 39.744 468 241 15 4 436 2 463 7.33e-81 257
MS.gene63111.t1 MTR_8g062270 38.950 457 216 17 24 435 15 453 2.54e-78 250
MS.gene63111.t1 MTR_8g014260 38.362 464 237 16 6 436 4 451 1.03e-76 246
MS.gene63111.t1 MTR_8g058970 37.630 481 243 15 6 436 4 477 3.50e-74 240
MS.gene63111.t1 MTR_4g032730 38.217 471 226 13 19 435 7 466 4.96e-74 239
MS.gene63111.t1 MTR_8g467800 35.957 470 256 13 5 441 1 458 1.67e-71 233
MS.gene63111.t1 MTR_5g092960 36.659 461 240 13 17 435 11 461 1.77e-68 225
MS.gene63111.t1 MTR_8g468840 37.955 440 236 12 25 433 14 447 3.94e-65 216
MS.gene63111.t1 MTR_8g468760 37.778 450 203 16 24 435 8 418 1.19e-64 214
MS.gene63111.t1 MTR_8g077460 36.490 433 199 15 19 436 4 375 9.79e-61 202
MS.gene63111.t1 MTR_2g086020 67.808 146 47 0 296 441 175 320 4.75e-60 199
MS.gene63111.t1 MTR_2g086020 50.000 140 63 3 51 186 1 137 2.15e-33 128
MS.gene63111.t1 MTR_8g445780 38.670 406 212 19 5 389 1 390 2.93e-58 196
MS.gene63111.t1 MTR_8g468810 39.894 376 187 14 4 346 2 371 4.16e-56 190
MS.gene63111.t1 MTR_8g014160 35.616 438 209 15 22 436 38 425 1.06e-50 177
MS.gene63111.t1 MTR_8g468810 41.584 303 146 12 4 280 2 299 7.36e-48 167
MS.gene63111.t1 MTR_8g468810 41.584 303 146 12 4 280 2 299 1.15e-47 166
MS.gene63111.t1 MTR_8g468810 41.584 303 146 12 4 280 2 299 1.25e-47 167
MS.gene63111.t1 MTR_5g092960 36.639 363 185 11 17 341 11 366 4.04e-44 159
MS.gene63111.t1 MTR_4g024710 37.500 280 151 11 176 436 73 347 2.10e-39 145
MS.gene63111.t1 MTR_8g014210 44.086 186 99 5 252 436 50 231 6.81e-37 135
MS.gene63111.t1 MTR_8g467800 36.120 299 162 10 5 280 1 293 9.11e-36 135
MS.gene63111.t1 MTR_1g041245 28.972 428 238 14 24 436 10 386 2.11e-34 132
MS.gene63111.t1 MTR_5g008950 28.774 424 229 18 27 436 1 365 3.07e-33 129
MS.gene63111.t1 MTR_5g021550 46.988 166 73 6 5 160 2 162 4.13e-32 120
MS.gene63111.t1 MTR_7g056433 27.488 422 252 13 25 436 12 389 1.48e-31 124
MS.gene63111.t1 MTR_7g032380 27.230 426 218 13 24 436 10 356 4.74e-29 117
MS.gene63111.t1 MTR_5g084070 27.635 427 270 13 23 428 11 419 5.31e-28 115
MS.gene63111.t1 MTR_3g023630 28.337 427 236 18 22 436 5 373 1.05e-27 113
MS.gene63111.t1 MTR_1g085120 29.157 439 251 17 12 436 79 471 1.60e-27 114
MS.gene63111.t1 MTR_7g098510 26.923 442 258 13 6 436 4 391 2.21e-27 113
MS.gene63111.t1 MTR_4g024745 35.227 264 145 9 176 419 27 284 3.04e-27 110
MS.gene63111.t1 MTR_1g085120 29.157 439 251 17 12 436 154 546 4.50e-27 114
MS.gene63111.t1 MTR_3g108150 28.074 431 233 14 25 435 13 386 5.34e-27 112
MS.gene63111.t1 MTR_8g014290 42.581 155 71 6 23 161 8 160 6.35e-27 106
MS.gene63111.t1 MTR_3g105060 27.098 417 244 15 24 436 13 373 1.07e-25 108
MS.gene63111.t1 MTR_7g032370 27.184 412 227 13 37 436 2 352 2.52e-25 106
MS.gene63111.t1 MTR_1089s0010 28.440 436 232 23 21 436 4 379 6.11e-25 105
MS.gene63111.t1 MTR_5g073420 29.095 409 213 18 16 408 2 349 6.35e-25 105
MS.gene63111.t1 MTR_3g099800 58.621 87 35 1 348 433 19 105 7.42e-25 98.6
MS.gene63111.t1 MTR_2g007450 27.451 459 258 20 9 434 2 418 4.59e-24 103
MS.gene63111.t1 MTR_5g080710 27.356 435 282 16 23 435 31 453 4.63e-24 104
MS.gene63111.t1 MTR_3g107100 24.541 436 263 14 25 439 11 401 7.19e-24 103
MS.gene63111.t1 MTR_7g098570 26.517 445 260 13 2 435 4 392 1.52e-23 103
MS.gene63111.t1 MTR_7g098480 26.829 451 243 15 6 435 4 388 2.51e-23 102
MS.gene63111.t1 MTR_7g026500 24.779 452 256 16 15 439 4 398 4.41e-23 100
MS.gene63111.t1 MTR_3g087260 26.793 474 255 14 25 435 12 456 1.30e-22 100
MS.gene63111.t1 MTR_6g040270 26.835 436 233 19 23 434 6 379 2.69e-22 98.6
MS.gene63111.t1 MTR_7g033915 26.402 428 228 16 23 435 9 364 2.95e-22 98.2
MS.gene63111.t1 MTR_1g108820 29.070 430 234 18 24 434 7 384 3.84e-22 98.2
MS.gene63111.t1 MTR_7g034115 26.683 416 244 14 24 428 10 375 5.13e-22 97.4
MS.gene63111.t1 MTR_7g056420 27.578 417 225 17 25 430 9 359 7.05e-22 99.4
MS.gene63111.t1 MTR_5g008920 25.404 433 255 14 17 436 4 381 7.12e-22 97.1
MS.gene63111.t1 MTR_7g056430 27.578 417 225 17 25 430 9 359 8.30e-22 99.0
MS.gene63111.t1 MTR_3g099830 25.290 431 233 15 24 434 11 372 9.42e-22 96.7
MS.gene63111.t1 MTR_7g033990 26.559 433 231 17 22 430 8 377 3.35e-21 95.5
MS.gene63111.t1 MTR_2g008320 28.378 444 243 21 12 436 40 427 4.30e-21 95.5
MS.gene63111.t1 MTR_3g108560 26.353 425 243 13 25 435 20 388 9.68e-21 94.0
MS.gene63111.t1 MTR_2g007400 26.862 443 244 19 24 436 11 403 1.19e-20 94.0
MS.gene63111.t1 MTR_1g066830 26.037 434 253 17 20 435 3 386 1.78e-20 93.2
MS.gene63111.t1 MTR_3g036250 25.647 425 234 16 25 433 5 363 2.29e-20 92.4
MS.gene63111.t1 MTR_6g022500 25.761 427 253 18 24 436 100 476 3.74e-20 92.8
MS.gene63111.t1 MTR_7g007080 29.234 431 225 19 25 433 4 376 8.46e-20 91.3
MS.gene63111.t1 MTR_7g056287 26.230 427 241 16 25 435 3 371 1.19e-19 90.5
MS.gene63111.t1 MTR_5g073370 29.369 412 205 20 25 414 5 352 1.40e-19 90.5
MS.gene63111.t1 MTR_5g045170 26.316 437 256 16 15 435 4 390 1.66e-19 90.5
MS.gene63111.t1 MTR_7g115270 35.533 197 109 8 25 209 12 202 2.72e-19 89.7
MS.gene63111.t1 MTR_8g085430 32.857 210 112 7 24 216 10 207 5.20e-19 88.2
MS.gene63111.t1 MTR_7g056447 35.263 190 101 8 25 205 9 185 8.69e-19 86.7
MS.gene63111.t1 MTR_3g107120 27.752 436 232 19 25 433 9 388 2.83e-18 86.7
MS.gene63111.t1 MTR_4g024720 38.182 165 68 8 25 160 17 176 3.92e-18 83.2
MS.gene63111.t1 MTR_0009s0080 26.157 432 262 14 1 422 2 386 5.07e-18 86.3
MS.gene63111.t1 MTR_3g107160 25.635 433 258 17 17 436 2 383 1.16e-17 84.7
MS.gene63111.t1 MTR_2g007500 27.649 387 201 21 18 383 7 335 1.43e-17 84.0
MS.gene63111.t1 MTR_7g055943 26.351 444 241 22 21 436 36 421 1.67e-17 84.7
MS.gene63111.t1 MTR_5g083890 25.420 417 231 17 25 406 6 377 7.65e-17 83.2
MS.gene63111.t1 MTR_6g044572 32.174 230 122 9 24 223 1 226 9.82e-17 82.0
MS.gene63111.t1 MTR_6g044560 30.488 246 137 9 8 223 161 402 1.02e-16 82.8
MS.gene63111.t1 MTR_8g014230 44.048 84 45 2 346 429 17 98 1.78e-16 75.1
MS.gene63111.t1 MTR_7g075820 24.658 438 251 20 25 434 6 392 2.63e-16 80.9
MS.gene63111.t1 MTR_5g058000 33.000 200 107 9 20 207 3 187 4.93e-16 79.7
MS.gene63111.t1 MTR_6g022360 24.821 419 255 14 24 435 42 407 8.17e-16 79.3
MS.gene63111.t1 MTR_4g098590 25.879 398 230 16 27 403 1 354 8.39e-16 79.0
MS.gene63111.t1 MTR_1g085120 33.023 215 123 9 12 216 166 369 1.80e-15 78.6
MS.gene63111.t1 MTR_7g034110 28.859 298 174 11 24 310 10 280 1.90e-15 77.8
MS.gene63111.t1 MTR_6g045333 24.944 445 268 16 11 435 47 445 2.59e-15 78.2
MS.gene63111.t1 MTR_6g011460 33.333 207 119 9 20 218 41 236 2.61e-15 77.8
MS.gene63111.t1 MTR_1g053025 25.282 443 241 18 24 433 1 386 2.74e-15 77.8
MS.gene63111.t1 MTR_5g045510 30.909 220 137 7 19 232 6 216 2.75e-15 77.4
MS.gene63111.t1 MTR_1g038710 31.760 233 139 10 8 227 2 227 8.34e-15 76.6
MS.gene63111.t1 MTR_7g114710 31.217 189 120 5 24 208 12 194 9.70e-15 75.9
MS.gene63111.t1 MTR_7g084080 36.774 155 86 6 10 162 2 146 1.15e-14 74.7
MS.gene63111.t1 MTR_4g056020 27.166 427 241 17 25 404 9 412 1.41e-14 75.9
MS.gene63111.t1 MTR_3g071850 25.117 426 257 15 21 428 20 401 1.54e-14 76.6
MS.gene63111.t1 MTR_3g467400 29.412 204 121 7 25 210 3 201 1.68e-14 75.1
MS.gene63111.t1 MTR_3g467400 39.080 87 51 1 350 436 283 367 6.53e-11 63.9
MS.gene63111.t1 MTR_1g107385 24.943 441 249 17 25 434 32 421 1.91e-14 75.1
MS.gene63111.t1 MTR_4g056030 26.535 456 262 19 18 428 2 429 2.45e-14 75.1
MS.gene63111.t1 MTR_5g061680 34.146 205 117 9 16 211 2 197 2.69e-14 73.9
MS.gene63111.t1 MTR_3g026920 25.835 449 234 21 22 433 16 402 4.70e-14 73.9
MS.gene63111.t1 MTR_7g007340 29.534 193 106 5 23 212 11 176 2.03e-13 71.6
MS.gene63111.t1 MTR_5g058100 31.034 203 114 8 19 209 3 191 2.41e-13 71.6
MS.gene63111.t1 MTR_4g113810 36.220 127 78 2 110 233 11 137 3.40e-13 67.8
MS.gene63111.t1 MTR_3g108560 31.746 189 111 6 25 209 20 194 5.65e-13 70.1
MS.gene63111.t1 MTR_8g066650 31.068 206 112 8 25 227 80 258 6.33e-13 70.9
MS.gene63111.t1 MTR_6g018660 35.955 178 98 8 21 186 16 189 7.64e-13 70.1
MS.gene63111.t1 MTR_3g040700 24.638 207 128 6 22 214 40 232 1.13e-12 69.7
MS.gene63111.t1 MTR_3g115430 35.135 111 66 3 327 436 20 125 2.26e-12 64.3
MS.gene63111.t1 MTR_1g108820 34.211 190 107 8 24 207 7 184 3.08e-12 68.2
MS.gene63111.t1 MTR_1g013560 24.554 448 284 18 9 423 3 429 3.31e-12 68.6
MS.gene63111.t1 MTR_1g077420 29.018 224 141 9 23 236 2 217 3.67e-12 67.0
MS.gene63111.t1 MTR_3g023270 33.333 144 86 4 23 165 10 144 3.80e-12 67.8
MS.gene63111.t1 MTR_2g005990 29.412 204 126 9 24 212 5 205 1.22e-11 66.6
MS.gene63111.t1 MTR_2g082800 23.134 402 253 12 25 394 27 404 1.48e-11 66.2
MS.gene63111.t1 MTR_3g023470 34.532 139 77 4 25 160 15 142 2.73e-11 65.5
MS.gene63111.t1 MTR_3g095640 33.766 154 91 6 21 166 14 164 3.27e-11 62.4
MS.gene63111.t1 MTR_3g048290 29.032 217 134 9 24 227 22 231 3.87e-11 65.1
MS.gene63111.t1 MTR_7g021630 26.687 326 185 13 25 316 17 322 3.96e-11 64.7
MS.gene63111.t1 MTR_7g021630 26.687 326 185 13 25 316 17 322 4.44e-11 64.7
MS.gene63111.t1 MTR_3g095600 29.384 211 110 10 24 223 3 185 5.85e-11 63.5
MS.gene63111.t1 MTR_4g134150 32.620 187 110 8 25 208 14 187 5.92e-11 62.8
MS.gene63111.t1 MTR_4g093690 27.758 281 162 15 12 273 5 263 9.13e-11 62.8
MS.gene63111.t1 MTR_8g465650 29.098 244 149 11 25 256 12 243 9.22e-11 63.5
MS.gene63111.t1 MTR_7g088260 32.124 193 118 8 19 207 85 268 9.48e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63111.t1 AT4G10400 27.765 425 277 13 24 435 1 408 4.33e-28 115
MS.gene63111.t1 AT4G10400 27.765 425 277 13 24 435 1 408 4.33e-28 115
MS.gene63111.t1 AT4G10400 27.765 425 277 13 24 435 1 408 4.33e-28 115
MS.gene63111.t1 AT5G56420 28.281 442 262 16 25 436 6 422 4.62e-28 115
MS.gene63111.t1 AT5G56420 28.281 442 262 16 25 436 6 422 4.62e-28 115
MS.gene63111.t1 AT5G56420 28.281 442 262 16 25 436 6 422 4.62e-28 115
MS.gene63111.t1 AT1G78750 25.272 459 282 19 20 433 13 455 8.29e-26 109
MS.gene63111.t1 AT1G78750 25.272 459 282 19 20 433 13 455 8.29e-26 109
MS.gene63111.t1 AT5G56370 26.386 451 262 17 24 435 1 420 9.27e-23 100
MS.gene63111.t1 AT5G56370 26.386 451 262 17 24 435 1 420 9.27e-23 100
MS.gene63111.t1 AT1G32375 28.381 451 256 20 24 436 1 422 2.07e-22 99.4
MS.gene63111.t1 AT1G32375 28.381 451 256 20 24 436 1 422 2.07e-22 99.4
MS.gene63111.t1 AT1G16930 27.426 474 263 23 15 436 5 449 2.59e-22 99.4
MS.gene63111.t1 AT1G16930 27.426 474 263 23 15 436 5 449 2.59e-22 99.4
MS.gene63111.t1 AT1G16930 27.426 474 263 23 15 436 5 449 2.59e-22 99.4
MS.gene63111.t1 AT5G38570 26.790 433 238 16 24 435 1 375 4.44e-21 94.7
MS.gene63111.t1 AT5G53635 25.714 455 261 16 27 435 2 425 7.91e-21 94.7
MS.gene63111.t1 AT5G56400 24.726 457 304 15 4 436 15 455 1.71e-20 94.0
MS.gene63111.t1 AT1G66310 26.116 448 269 17 23 433 17 439 3.53e-20 92.8
MS.gene63111.t1 AT1G78760 24.336 452 287 18 22 437 13 445 4.51e-20 92.8
MS.gene63111.t1 AT5G53840 26.293 464 273 21 10 433 3 437 8.21e-20 91.7
MS.gene63111.t1 AT1G69630 24.779 452 286 15 20 433 13 448 9.04e-20 91.7
MS.gene63111.t1 AT4G13965 27.626 438 271 20 20 433 5 420 1.25e-19 90.9
MS.gene63111.t1 AT5G56560 26.846 447 263 20 23 436 3 418 2.20e-19 90.1
MS.gene63111.t1 AT5G22610 23.702 443 277 15 25 433 18 433 3.11e-19 90.1
MS.gene63111.t1 AT5G22670 25.522 431 248 19 16 399 2 406 4.45e-19 89.7
MS.gene63111.t1 AT1G51370 24.444 450 296 17 5 431 2 430 5.91e-19 89.0
MS.gene63111.t1 AT4G26340 27.152 453 256 20 24 436 1 419 6.60e-19 89.0
MS.gene63111.t1 AT4G09920 34.184 196 107 7 24 209 1 184 9.59e-19 86.7
MS.gene63111.t1 AT4G09920 34.184 196 107 7 24 209 1 184 9.59e-19 86.7
MS.gene63111.t1 AT4G09920 34.184 196 107 7 24 209 1 184 9.59e-19 86.7
MS.gene63111.t1 AT4G09920 34.184 196 107 7 24 209 1 184 9.83e-19 87.0
MS.gene63111.t1 AT4G09920 34.184 196 107 7 24 209 1 184 9.83e-19 87.0
MS.gene63111.t1 AT2G26030 26.797 459 267 20 25 433 4 443 3.92e-18 86.7
MS.gene63111.t1 AT3G59200 33.168 202 111 8 25 212 7 198 5.34e-18 85.5
MS.gene63111.t1 AT1G66300 24.946 465 288 19 9 433 10 453 6.46e-18 86.3
MS.gene63111.t1 AT5G38590 25.647 425 265 15 24 421 1 401 9.18e-18 85.5
MS.gene63111.t1 AT3G59200 33.168 202 111 8 25 212 7 198 2.23e-17 84.7
MS.gene63111.t1 AT5G56440 26.622 447 275 18 24 435 1 429 2.42e-17 84.3
MS.gene63111.t1 AT5G50270 27.294 436 248 18 24 418 1 408 3.25e-17 83.6
MS.gene63111.t1 AT5G22660 25.325 462 263 17 25 434 13 444 4.78e-17 83.6
MS.gene63111.t1 AT3G50710 27.051 451 267 22 24 436 1 427 6.69e-17 82.8
MS.gene63111.t1 AT5G22720 23.218 491 290 17 5 435 1 464 7.88e-17 82.8
MS.gene63111.t1 AT2G04230 26.368 402 251 18 25 395 13 400 8.02e-17 82.8
MS.gene63111.t1 AT2G26030 26.696 457 265 20 25 433 4 438 1.32e-16 82.0
MS.gene63111.t1 AT2G26030 26.696 457 265 20 25 433 4 438 1.32e-16 82.0
MS.gene63111.t1 AT5G44950 25.236 424 257 19 25 406 4 409 3.43e-16 80.9
MS.gene63111.t1 AT5G22700 25.275 364 231 12 25 377 43 376 9.09e-16 79.3
MS.gene63111.t1 AT5G22610 22.410 473 276 16 25 433 18 463 1.51e-15 79.0
MS.gene63111.t1 AT3G56780 22.998 487 280 13 27 438 9 475 1.69e-15 79.0
MS.gene63111.t1 AT5G56410 25.527 427 258 16 24 405 1 412 3.09e-15 78.2
MS.gene63111.t1 AT5G22700 31.795 195 113 7 25 212 6 187 5.24e-15 77.0
MS.gene63111.t1 AT5G22700 31.795 195 113 7 25 212 6 187 5.24e-15 77.0
MS.gene63111.t1 AT5G22700 31.795 195 113 7 25 212 6 187 5.24e-15 77.0
MS.gene63111.t1 AT5G22700 31.795 195 113 7 25 212 6 187 5.24e-15 77.0
MS.gene63111.t1 AT3G58920 26.403 481 273 21 24 435 1 469 5.38e-15 77.4
MS.gene63111.t1 AT5G22700 31.795 195 113 7 25 212 43 224 5.70e-15 77.0
MS.gene63111.t1 AT1G51370 24.552 391 254 15 5 373 2 373 9.13e-15 76.3
MS.gene63111.t1 AT4G00160 27.563 439 277 19 25 435 16 441 1.38e-14 75.9
MS.gene63111.t1 AT1G66300 23.947 451 264 21 9 433 10 407 1.87e-14 75.5
MS.gene63111.t1 AT1G55030 24.939 409 265 18 8 394 2 390 3.44e-14 74.7
MS.gene63111.t1 AT1G55030 25.505 396 253 18 21 394 5 380 3.65e-14 74.3
MS.gene63111.t1 AT5G18780 26.580 459 264 16 21 433 7 438 4.10e-14 74.3
MS.gene63111.t1 AT5G18780 26.580 459 264 16 21 433 7 438 4.10e-14 74.3
MS.gene63111.t1 AT3G26922 26.894 264 166 11 19 273 8 253 4.41e-14 73.2
MS.gene63111.t1 AT3G26922 26.894 264 166 11 19 273 8 253 4.41e-14 73.2
MS.gene63111.t1 AT5G53640 28.571 210 135 6 8 214 5 202 6.89e-14 71.2
MS.gene63111.t1 AT3G60040 29.469 207 120 8 25 210 13 214 1.13e-13 73.6
MS.gene63111.t1 AT3G60040 29.469 207 120 8 25 210 232 433 1.28e-13 73.6
MS.gene63111.t1 AT3G60040 29.469 207 120 8 25 210 233 434 1.30e-13 73.6
MS.gene63111.t1 AT3G60040 29.469 207 120 8 25 210 230 431 1.34e-13 73.6
MS.gene63111.t1 AT3G60040 29.469 207 120 8 25 210 232 433 1.39e-13 73.2
MS.gene63111.t1 AT1G66320 23.899 477 280 21 7 433 11 454 2.69e-13 72.0
MS.gene63111.t1 AT5G56380 24.229 454 288 14 24 436 1 439 2.96e-13 71.6
MS.gene63111.t1 AT5G56380 24.229 454 288 14 24 436 1 439 2.96e-13 71.6
MS.gene63111.t1 AT5G62970 24.524 473 271 18 24 435 1 448 3.65e-13 71.6
MS.gene63111.t1 AT4G14096 31.443 194 111 9 25 207 8 190 4.00e-13 71.6
MS.gene63111.t1 AT4G14096 31.443 194 111 9 25 207 8 190 4.00e-13 71.6
MS.gene63111.t1 AT3G49030 24.946 461 301 21 5 438 1 443 5.36e-13 70.9
MS.gene63111.t1 AT5G38590 30.729 192 119 6 24 210 1 183 8.04e-13 69.3
MS.gene63111.t1 AT5G41840 30.045 223 118 11 9 207 2 210 2.22e-12 69.3
MS.gene63111.t1 AT5G22660 29.717 212 127 6 25 228 13 210 2.35e-12 68.2
MS.gene63111.t1 AT1G13780 25.175 429 255 18 25 403 10 422 3.82e-12 68.6
MS.gene63111.t1 AT3G59240 27.706 231 135 8 25 237 8 224 8.36e-12 67.4
MS.gene63111.t1 AT5G50270 31.658 199 109 7 24 209 1 185 9.88e-12 66.2
MS.gene63111.t1 AT1G66640 24.020 408 248 17 58 433 36 413 1.05e-11 67.0
MS.gene63111.t1 AT1G51370 23.836 365 239 14 5 350 2 346 2.18e-11 65.5
MS.gene63111.t1 AT1G06630 28.440 218 135 8 25 227 12 223 3.12e-11 64.7
MS.gene63111.t1 AT1G06630 28.440 218 135 8 25 227 12 223 3.49e-11 65.1
MS.gene63111.t1 AT1G06630 28.440 218 135 8 25 227 12 223 3.49e-11 65.1
MS.gene63111.t1 AT1G06630 28.440 218 135 8 25 227 12 223 4.72e-11 64.7
MS.gene63111.t1 AT1G06630 28.440 218 135 8 25 227 12 223 4.72e-11 64.7
MS.gene63111.t1 AT1G06630 28.440 218 135 8 25 227 12 223 4.72e-11 64.7
MS.gene63111.t1 AT1G06630 28.440 218 135 8 25 227 12 223 4.72e-11 64.7
MS.gene63111.t1 AT1G06630 28.440 218 135 8 25 227 21 232 5.04e-11 64.7
MS.gene63111.t1 AT1G06630 28.440 218 135 8 25 227 12 223 5.81e-11 64.7
MS.gene63111.t1 AT1G60400 30.332 211 126 9 15 215 4 203 9.82e-11 63.9

Find 100 sgRNAs with CRISPR-Local

Find 130 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATGAACTGTTTGTCTTCT+AGG 0.173631 8.1:+43163805 MS.gene63111:CDS
TATTGATTATGAGAACTTTA+AGG 0.213840 8.1:-43164852 None:intergenic
TGTTCTAAATCGCGAAATTC+TGG 0.261819 8.1:-43164763 None:intergenic
TTGGAGGTTTACTCTGTATA+TGG 0.269027 8.1:+43164377 MS.gene63111:CDS
GACTGCTCAATCTGTCCATC+TGG 0.287385 8.1:-43163722 None:intergenic
TTTGCGTAACGGACTTGTTT+TGG 0.295622 8.1:+43165136 MS.gene63111:CDS
CAGAATATTTGAGTTAAAAC+AGG 0.317327 8.1:-43164803 None:intergenic
GGCTACAGATTGGGCATTGC+AGG 0.324307 8.1:+43164488 MS.gene63111:CDS
CTGCCCCAAGCTCGAAGATT+TGG 0.324654 8.1:+43164358 MS.gene63111:CDS
AATTCTGGATAATTTATATC+AGG 0.327966 8.1:-43164748 None:intergenic
CTGAAGTATATTTGCATAGA+AGG 0.331495 8.1:+43165071 MS.gene63111:CDS
ACCTCCAAATCTTCGAGCTT+GGG 0.334626 8.1:-43164362 None:intergenic
TTTGAAGGTCATTGAGAATA+GGG 0.335744 8.1:-43164577 None:intergenic
CTCTGTATATGGAAACAGTT+TGG 0.343156 8.1:+43164388 MS.gene63111:CDS
GACCCAGTTGGGTCTCCTTA+AGG 0.346670 8.1:+43165269 MS.gene63111:CDS
CCACCTCTGGAAAGATCTTC+AGG 0.351277 8.1:+43163833 MS.gene63111:CDS
CATCAAGTTCATAGGTGAAA+TGG 0.356899 8.1:-43163956 None:intergenic
AACAAATTCACTTTGACAAT+AGG 0.361112 8.1:-43164552 None:intergenic
AACTTAACTTTGACCCAGTT+GGG 0.361183 8.1:+43165258 MS.gene63111:CDS
CTTCTAGGTGGCGCCACCTC+TGG 0.361912 8.1:+43163820 MS.gene63111:CDS
TGGAAACTTTGCAGTCTATC+TGG 0.377861 8.1:+43164227 MS.gene63111:intron
ATACATGCAGTGGCCACTTC+AGG 0.378400 8.1:+43164723 MS.gene63111:intron
ATCTGGTGGTAAATACAATA+TGG 0.383544 8.1:+43164244 MS.gene63111:CDS
TGGTCCTGGTGGCTACAGAT+TGG 0.386642 8.1:+43164478 MS.gene63111:CDS
TCGATAGTTGCCTTTCTCTC+TGG 0.388772 8.1:+43164335 MS.gene63111:CDS
CTTCTATGCAAATATACTTC+AGG 0.390562 8.1:-43165070 None:intergenic
TGCAGGCAACTTTCACACTA+TGG 0.398879 8.1:+43164505 MS.gene63111:CDS
GGTCCTGGTGGCTACAGATT+GGG 0.408891 8.1:+43164479 MS.gene63111:CDS
CCTAGAAGACAAACAGTTCA+TGG 0.412239 8.1:-43163805 None:intergenic
CCCCAAGCTCGAAGATTTGG+AGG 0.425439 8.1:+43164361 MS.gene63111:CDS
GTCGTAACGGACGTTATTGT+TGG 0.432085 8.1:-43163783 None:intergenic
GGTGTATTTCAACAACCTCT+TGG 0.433361 8.1:-43164429 None:intergenic
TCCGTTACGCAAAATAAATT+CGG 0.437038 8.1:-43165126 None:intergenic
GTACCTTAAGGAGACCCAAC+TGG 0.439120 8.1:-43165272 None:intergenic
CTTGGGGCAGCCAGAGAGAA+AGG 0.442176 8.1:-43164345 None:intergenic
AACCTCCAAATCTTCGAGCT+TGG 0.455915 8.1:-43164363 None:intergenic
AGTCCAAGTGAAATTATCAT+TGG 0.470068 8.1:-43164450 None:intergenic
CAACTTAACTTTGACCCAGT+TGG 0.473431 8.1:+43165257 MS.gene63111:CDS
TGCTGAGATCAAGTTCTTCA+AGG 0.477803 8.1:-43164043 None:intergenic
GAGATCAAGTTCTTCAAGGC+GGG 0.479212 8.1:-43164039 None:intergenic
AGGTGGGATATGAGACATCT+AGG 0.488525 8.1:-43165050 None:intergenic
ATTTGCATAGAAGGATATCA+AGG 0.494802 8.1:+43165080 MS.gene63111:CDS
AAGTCGAATGTATTGAAATG+TGG 0.501176 8.1:+43163997 MS.gene63111:CDS
GTCATGTTCATCAAGTTCAT+AGG 0.502093 8.1:-43163964 None:intergenic
TTTCAACAACCTCTTGGAGC+TGG 0.503440 8.1:-43164423 None:intergenic
GGACGTTATTGTTGGGAGGA+AGG 0.509138 8.1:-43163775 None:intergenic
GCGACTCAGATAGCTTCAAA+AGG 0.522015 8.1:+43163874 MS.gene63111:CDS
GCAATTTCCATCACTGAAGA+AGG 0.523230 8.1:+43164286 MS.gene63111:CDS
CCTCCAAATCTTCGAGCTTG+GGG 0.531990 8.1:-43164361 None:intergenic
GCAACAACCTCGTTTCCCTC+AGG 0.532637 8.1:+43164117 MS.gene63111:CDS
ATGTGGGTCCGTGCTGCCAT+TGG 0.533953 8.1:+43164014 MS.gene63111:CDS
CAACTGGGTCAAAGTTAAGT+TGG 0.536445 8.1:-43165256 None:intergenic
TCGTAACGGACGTTATTGTT+GGG 0.536686 8.1:-43163782 None:intergenic
GCTTGCACGGCGACGACAAG+TGG 0.537318 8.1:+43163693 MS.gene63111:CDS
CTAGGAACAGTTGTTGATTG+TGG 0.543151 8.1:-43165032 None:intergenic
CTATGCAAATATACTTCAGG+TGG 0.545118 8.1:-43165067 None:intergenic
ATATGACACAAAACTGAGTC+CGG 0.545120 8.1:-43163747 None:intergenic
TCCCATGTTCGTAAAGATGA+TGG 0.547163 8.1:-43165008 None:intergenic
AACCATCATCTTTACGAACA+TGG 0.549310 8.1:+43165006 MS.gene63111:CDS
GAATGTGGCGCGATCTGCGG+AGG 0.549789 8.1:-43163926 None:intergenic
AGATACACCTTCTTCAGTGA+TGG 0.559803 8.1:-43164293 None:intergenic
ACTGCTCAATCTGTCCATCT+GGG 0.561303 8.1:-43163721 None:intergenic
GGACAGATTGAGCAGTCTAC+CGG 0.562892 8.1:+43163728 MS.gene63111:CDS
TTGCAGCTCATGAAGAAAGA+AGG 0.565936 8.1:-43164098 None:intergenic
AGATCAAGTTCTTCAAGGCG+GGG 0.574749 8.1:-43164038 None:intergenic
AGTCGAATGTATTGAAATGT+GGG 0.575102 8.1:+43163998 MS.gene63111:CDS
ACCATCATCTTTACGAACAT+GGG 0.576385 8.1:+43165007 MS.gene63111:CDS
TTTATATCAGGAACCTGAAG+TGG 0.582063 8.1:-43164736 None:intergenic
AAGATTAACAAATATACCGA+GGG 0.582923 8.1:+43165220 MS.gene63111:CDS
ACACCAATGATAATTTCACT+TGG 0.587332 8.1:+43164447 MS.gene63111:CDS
GTCACGTCATTCAACATCAA+AGG 0.588332 8.1:+43164625 MS.gene63111:CDS
GACAAGTGGAGGCACCCAGA+TGG 0.590276 8.1:+43163707 MS.gene63111:CDS
CTGAGTCGCAATCGTTGAAG+CGG 0.591203 8.1:-43163860 None:intergenic
TACCTTAAGGAGACCCAACT+GGG 0.595328 8.1:-43165271 None:intergenic
ATGCCCAATCTGTAGCCACC+AGG 0.596978 8.1:-43164482 None:intergenic
GATCAAGTTCTTCAAGGCGG+GGG 0.598443 8.1:-43164037 None:intergenic
TCATGAAGAAAGAAGGAGGA+AGG 0.602375 8.1:-43164091 None:intergenic
TGCACGGCGACGACAAGTGG+AGG 0.607534 8.1:+43163696 MS.gene63111:CDS
TATGAATGTGGCGCGATCTG+CGG 0.615178 8.1:-43163929 None:intergenic
CCTGAAGATCTTTCCAGAGG+TGG 0.623862 8.1:-43163833 None:intergenic
AAGAAAACGAAAAGCTTGCA+CGG 0.629248 8.1:+43163680 MS.gene63111:CDS
TAAATTACCTGAGGGAAACG+AGG 0.631468 8.1:-43164124 None:intergenic
AATGTGGCGCGATCTGCGGA+GGG 0.637434 8.1:-43163925 None:intergenic
AAAGATTAACAAATATACCG+AGG 0.643261 8.1:+43165219 MS.gene63111:CDS
AAACTTTGCAGTCTATCTGG+TGG 0.646236 8.1:+43164230 MS.gene63111:intron
AAACTTTCTCCAGCTCCAAG+AGG 0.646864 8.1:+43164414 MS.gene63111:CDS
CAAACAGTTCATGGTCGTAA+CGG 0.647673 8.1:-43163796 None:intergenic
TAACGGACGTTATTGTTGGG+AGG 0.653327 8.1:-43163779 None:intergenic
CAGCTCATGAAGAAAGAAGG+AGG 0.655168 8.1:-43164095 None:intergenic
AGAATATTTGAGTTAAAACA+GGG 0.665389 8.1:-43164802 None:intergenic
TGAAATGGAACTTATGAATG+TGG 0.667776 8.1:-43163941 None:intergenic
TGAACTGTTTGTCTTCTAGG+TGG 0.668870 8.1:+43163808 MS.gene63111:CDS
TATGCAAATATACTTCAGGT+GGG 0.673254 8.1:-43165066 None:intergenic
GAAGGTGTATCTATGCACAA+TGG 0.675705 8.1:+43164304 MS.gene63111:CDS
TCTCATAATCAATAGCCACA+AGG 0.678177 8.1:+43164861 MS.gene63111:CDS
TGGCAAGTGACAGATCCCCT+CGG 0.678473 8.1:-43165236 None:intergenic
AGGCAACTTTCACACTATGG+CGG 0.690913 8.1:+43164508 MS.gene63111:CDS
TGAGATCAAGTTCTTCAAGG+CGG 0.695715 8.1:-43164040 None:intergenic
ACACCTGAAGATCTTTCCAG+AGG 0.706614 8.1:-43163836 None:intergenic
AGATTAACAAATATACCGAG+GGG 0.744560 8.1:+43165221 MS.gene63111:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTTATATATAAATATAGTT+TGG + chr8.1:43164666-43164685 MS.gene63111:intron 10.0%
!! AATTAATTTAGAGAAGAATT+GGG - chr8.1:43164184-43164203 None:intergenic 15.0%
!! TAATTAATTTAGAGAAGAAT+TGG - chr8.1:43164185-43164204 None:intergenic 15.0%
!! TATTAAATTAAATTACCTGA+GGG - chr8.1:43164135-43164154 None:intergenic 15.0%
!! AATTCTGGATAATTTATATC+AGG - chr8.1:43164751-43164770 None:intergenic 20.0%
!! CTCTAAATTAATTACGAAAT+TGG + chr8.1:43164191-43164210 MS.gene63111:intron 20.0%
!! GTATTAAATTAAATTACCTG+AGG - chr8.1:43164136-43164155 None:intergenic 20.0%
!!! AGAATATTTGAGTTAAAACA+GGG - chr8.1:43164805-43164824 None:intergenic 20.0%
!!! ATTCATTATCATCATTTTGA+AGG - chr8.1:43164595-43164614 None:intergenic 20.0%
!!! TATTGATTATGAGAACTTTA+AGG - chr8.1:43164855-43164874 None:intergenic 20.0%
!!! TTGTTAATCTTTTGATAGAA+CGG - chr8.1:43165211-43165230 None:intergenic 20.0%
! AAAGATTAACAAATATACCG+AGG + chr8.1:43165219-43165238 MS.gene63111:CDS 25.0%
! AACAAATTCACTTTGACAAT+AGG - chr8.1:43164555-43164574 None:intergenic 25.0%
! AAGATTAACAAATATACCGA+GGG + chr8.1:43165220-43165239 MS.gene63111:CDS 25.0%
! AGTTTATTTGAATCCATCTT+TGG + chr8.1:43164901-43164920 MS.gene63111:intron 25.0%
! TCGAAAATATATGTGGTTTA+CGG - chr8.1:43164956-43164975 None:intergenic 25.0%
!! CAGAATATTTGAGTTAAAAC+AGG - chr8.1:43164806-43164825 None:intergenic 25.0%
!!! CTGTTTTAACTCAAATATTC+TGG + chr8.1:43164804-43164823 MS.gene63111:CDS 25.0%
!!! TATTTTTGTTGACATTTCAC+TGG + chr8.1:43165169-43165188 MS.gene63111:CDS 25.0%
AAGTCGAATGTATTGAAATG+TGG + chr8.1:43163997-43164016 MS.gene63111:CDS 30.0%
ACACCAATGATAATTTCACT+TGG + chr8.1:43164447-43164466 MS.gene63111:CDS 30.0%
AGATGACTCGAAAATATATG+TGG - chr8.1:43164963-43164982 None:intergenic 30.0%
AGATTAACAAATATACCGAG+GGG + chr8.1:43165221-43165240 MS.gene63111:CDS 30.0%
AGTCCAAGTGAAATTATCAT+TGG - chr8.1:43164453-43164472 None:intergenic 30.0%
AGTCGAATGTATTGAAATGT+GGG + chr8.1:43163998-43164017 MS.gene63111:CDS 30.0%
ATCTGGTGGTAAATACAATA+TGG + chr8.1:43164244-43164263 MS.gene63111:CDS 30.0%
ATTTGCATAGAAGGATATCA+AGG + chr8.1:43165080-43165099 MS.gene63111:CDS 30.0%
CTGAAGTATATTTGCATAGA+AGG + chr8.1:43165071-43165090 MS.gene63111:CDS 30.0%
CTTCTATGCAAATATACTTC+AGG - chr8.1:43165073-43165092 None:intergenic 30.0%
TATGCAAATATACTTCAGGT+GGG - chr8.1:43165069-43165088 None:intergenic 30.0%
TCCGTTACGCAAAATAAATT+CGG - chr8.1:43165129-43165148 None:intergenic 30.0%
TGAAATGGAACTTATGAATG+TGG - chr8.1:43163944-43163963 None:intergenic 30.0%
TTTGAAGGTCATTGAGAATA+GGG - chr8.1:43164580-43164599 None:intergenic 30.0%
! AATTTCACTTGGACTTTTCT+TGG + chr8.1:43164458-43164477 MS.gene63111:CDS 30.0%
! AGCTTTTCGTTTTCTTTTAG+AGG - chr8.1:43163676-43163695 None:intergenic 30.0%
!! TTTCTTTTAGAGGCTAACTT+GGG - chr8.1:43163666-43163685 None:intergenic 30.0%
!! TTTTCTTTTAGAGGCTAACT+TGG - chr8.1:43163667-43163686 None:intergenic 30.0%
!! TTTTGAAGGTCATTGAGAAT+AGG - chr8.1:43164581-43164600 None:intergenic 30.0%
AAATTGGTGAACTCATGTGT+TGG + chr8.1:43164207-43164226 MS.gene63111:intron 35.0%
AACCATCATCTTTACGAACA+TGG + chr8.1:43165006-43165025 MS.gene63111:CDS 35.0%
AACTTAACTTTGACCCAGTT+GGG + chr8.1:43165258-43165277 MS.gene63111:CDS 35.0%
AAGAAAACGAAAAGCTTGCA+CGG + chr8.1:43163680-43163699 MS.gene63111:CDS 35.0%
ACCATCATCTTTACGAACAT+GGG + chr8.1:43165007-43165026 MS.gene63111:CDS 35.0%
ATACATAGACAGACCAAAGA+TGG - chr8.1:43164917-43164936 None:intergenic 35.0%
ATATGACACAAAACTGAGTC+CGG - chr8.1:43163750-43163769 None:intergenic 35.0%
CATCAAGTTCATAGGTGAAA+TGG - chr8.1:43163959-43163978 None:intergenic 35.0%
CTATGCAAATATACTTCAGG+TGG - chr8.1:43165070-43165089 None:intergenic 35.0%
CTCTGTATATGGAAACAGTT+TGG + chr8.1:43164388-43164407 MS.gene63111:CDS 35.0%
GTCATGTTCATCAAGTTCAT+AGG - chr8.1:43163967-43163986 None:intergenic 35.0%
TATACAATGATGGCAAGTGA+TGG - chr8.1:43164706-43164725 None:intergenic 35.0%
TCTCATAATCAATAGCCACA+AGG + chr8.1:43164861-43164880 MS.gene63111:CDS 35.0%
TTGGAGGTTTACTCTGTATA+TGG + chr8.1:43164377-43164396 MS.gene63111:CDS 35.0%
TTTATATCAGGAACCTGAAG+TGG - chr8.1:43164739-43164758 None:intergenic 35.0%
! TGTTCTAAATCGCGAAATTC+TGG - chr8.1:43164766-43164785 None:intergenic 35.0%
!!! GCCGAATTTATTTTGCGTAA+CGG + chr8.1:43165125-43165144 MS.gene63111:CDS 35.0%
AAACTTTGCAGTCTATCTGG+TGG + chr8.1:43164230-43164249 MS.gene63111:intron 40.0%
AGATACACCTTCTTCAGTGA+TGG - chr8.1:43164296-43164315 None:intergenic 40.0%
CAAACAGTTCATGGTCGTAA+CGG - chr8.1:43163799-43163818 None:intergenic 40.0%
CAACTGGGTCAAAGTTAAGT+TGG - chr8.1:43165259-43165278 None:intergenic 40.0%
CAACTTAACTTTGACCCAGT+TGG + chr8.1:43165257-43165276 MS.gene63111:CDS 40.0%
CCACTGCATGTATACAATGA+TGG - chr8.1:43164716-43164735 None:intergenic 40.0%
CCATCATTGTATACATGCAG+TGG + chr8.1:43164713-43164732 MS.gene63111:intron 40.0%
CCATGAACTGTTTGTCTTCT+AGG + chr8.1:43163805-43163824 MS.gene63111:CDS 40.0%
CCTAGAAGACAAACAGTTCA+TGG - chr8.1:43163808-43163827 None:intergenic 40.0%
GCAATTTCCATCACTGAAGA+AGG + chr8.1:43164286-43164305 MS.gene63111:CDS 40.0%
GGTGTATTTCAACAACCTCT+TGG - chr8.1:43164432-43164451 None:intergenic 40.0%
GTCACGTCATTCAACATCAA+AGG + chr8.1:43164625-43164644 MS.gene63111:CDS 40.0%
GTCATCTTGTTCCATGTTAC+TGG + chr8.1:43164976-43164995 MS.gene63111:intron 40.0%
TAAATTACCTGAGGGAAACG+AGG - chr8.1:43164127-43164146 None:intergenic 40.0%
TCATGAAGAAAGAAGGAGGA+AGG - chr8.1:43164094-43164113 None:intergenic 40.0%
TCCCATGTTCGTAAAGATGA+TGG - chr8.1:43165011-43165030 None:intergenic 40.0%
TCTTGTTCCATGTTACTGGT+AGG + chr8.1:43164980-43164999 MS.gene63111:intron 40.0%
TGAACTGTTTGTCTTCTAGG+TGG + chr8.1:43163808-43163827 MS.gene63111:CDS 40.0%
TGAGATCAAGTTCTTCAAGG+CGG - chr8.1:43164043-43164062 None:intergenic 40.0%
TGCTGAGATCAAGTTCTTCA+AGG - chr8.1:43164046-43164065 None:intergenic 40.0%
TGGAAACTTTGCAGTCTATC+TGG + chr8.1:43164227-43164246 MS.gene63111:intron 40.0%
TTGCAGCTCATGAAGAAAGA+AGG - chr8.1:43164101-43164120 None:intergenic 40.0%
! AGAAGTGTGAACAAACCTTG+TGG - chr8.1:43164879-43164898 None:intergenic 40.0%
! CTAGGAACAGTTGTTGATTG+TGG - chr8.1:43165035-43165054 None:intergenic 40.0%
! GAAGGTGTATCTATGCACAA+TGG + chr8.1:43164304-43164323 MS.gene63111:CDS 40.0%
!! TCGTAACGGACGTTATTGTT+GGG - chr8.1:43163785-43163804 None:intergenic 40.0%
!!! TTTGCGTAACGGACTTGTTT+TGG + chr8.1:43165136-43165155 MS.gene63111:CDS 40.0%
AAACTTTCTCCAGCTCCAAG+AGG + chr8.1:43164414-43164433 MS.gene63111:CDS 45.0%
AACCTCCAAATCTTCGAGCT+TGG - chr8.1:43164366-43164385 None:intergenic 45.0%
ACACCTGAAGATCTTTCCAG+AGG - chr8.1:43163839-43163858 None:intergenic 45.0%
ACCTCCAAATCTTCGAGCTT+GGG - chr8.1:43164365-43164384 None:intergenic 45.0%
ACTGCTCAATCTGTCCATCT+GGG - chr8.1:43163724-43163743 None:intergenic 45.0%
AGATCAAGTTCTTCAAGGCG+GGG - chr8.1:43164041-43164060 None:intergenic 45.0%
AGGCAACTTTCACACTATGG+CGG + chr8.1:43164508-43164527 MS.gene63111:CDS 45.0%
AGGTGGGATATGAGACATCT+AGG - chr8.1:43165053-43165072 None:intergenic 45.0%
CAGCTCATGAAGAAAGAAGG+AGG - chr8.1:43164098-43164117 None:intergenic 45.0%
GAGATCAAGTTCTTCAAGGC+GGG - chr8.1:43164042-43164061 None:intergenic 45.0%
GCGACTCAGATAGCTTCAAA+AGG + chr8.1:43163874-43163893 MS.gene63111:CDS 45.0%
TCGATAGTTGCCTTTCTCTC+TGG + chr8.1:43164335-43164354 MS.gene63111:CDS 45.0%
TGCAGGCAACTTTCACACTA+TGG + chr8.1:43164505-43164524 MS.gene63111:CDS 45.0%
TGTTCCATGTTACTGGTAGG+AGG + chr8.1:43164983-43165002 MS.gene63111:intron 45.0%
TTTCAACAACCTCTTGGAGC+TGG - chr8.1:43164426-43164445 None:intergenic 45.0%
! ACTTGGACTTTTCTTGGTCC+TGG + chr8.1:43164464-43164483 MS.gene63111:CDS 45.0%
! TAACGGACGTTATTGTTGGG+AGG - chr8.1:43163782-43163801 None:intergenic 45.0%
!! GTCGTAACGGACGTTATTGT+TGG - chr8.1:43163786-43163805 None:intergenic 45.0%
ATACATGCAGTGGCCACTTC+AGG + chr8.1:43164723-43164742 MS.gene63111:intron 50.0%
CCTCCAAATCTTCGAGCTTG+GGG - chr8.1:43164364-43164383 None:intergenic 50.0%
CCTGAAGATCTTTCCAGAGG+TGG - chr8.1:43163836-43163855 None:intergenic 50.0%
CTGAGTCGCAATCGTTGAAG+CGG - chr8.1:43163863-43163882 None:intergenic 50.0%
GACTGCTCAATCTGTCCATC+TGG - chr8.1:43163725-43163744 None:intergenic 50.0%
GATCAAGTTCTTCAAGGCGG+GGG - chr8.1:43164040-43164059 None:intergenic 50.0%
GGACAGATTGAGCAGTCTAC+CGG + chr8.1:43163728-43163747 MS.gene63111:CDS 50.0%
GGACGTTATTGTTGGGAGGA+AGG - chr8.1:43163778-43163797 None:intergenic 50.0%
GGTTCCTCCTACCAGTAACA+TGG - chr8.1:43164990-43165009 None:intergenic 50.0%
TATGAATGTGGCGCGATCTG+CGG - chr8.1:43163932-43163951 None:intergenic 50.0%
! CCACCTCTGGAAAGATCTTC+AGG + chr8.1:43163833-43163852 MS.gene63111:CDS 50.0%
! TGGACTTTTCTTGGTCCTGG+TGG + chr8.1:43164467-43164486 MS.gene63111:CDS 50.0%
ATGCCCAATCTGTAGCCACC+AGG - chr8.1:43164485-43164504 None:intergenic 55.0%
CCCCAAGCTCGAAGATTTGG+AGG + chr8.1:43164361-43164380 MS.gene63111:CDS 55.0%
CTGCCCCAAGCTCGAAGATT+TGG + chr8.1:43164358-43164377 MS.gene63111:CDS 55.0%
GCAACAACCTCGTTTCCCTC+AGG + chr8.1:43164117-43164136 MS.gene63111:CDS 55.0%
GGTCCTGGTGGCTACAGATT+GGG + chr8.1:43164479-43164498 MS.gene63111:CDS 55.0%
TGGCAAGTGACAGATCCCCT+CGG - chr8.1:43165239-43165258 None:intergenic 55.0%
TGGTCCTGGTGGCTACAGAT+TGG + chr8.1:43164478-43164497 MS.gene63111:CDS 55.0%
! GGCTACAGATTGGGCATTGC+AGG + chr8.1:43164488-43164507 MS.gene63111:CDS 55.0%
AATGTGGCGCGATCTGCGGA+GGG - chr8.1:43163928-43163947 None:intergenic 60.0%
ATGTGGGTCCGTGCTGCCAT+TGG + chr8.1:43164014-43164033 MS.gene63111:CDS 60.0%
CTTGGGGCAGCCAGAGAGAA+AGG - chr8.1:43164348-43164367 None:intergenic 60.0%
TTCTTCAAGGCGGGGGCCAA+TGG - chr8.1:43164033-43164052 None:intergenic 60.0%
!! GACAAGTGGAGGCACCCAGA+TGG + chr8.1:43163707-43163726 MS.gene63111:CDS 60.0%
CTTCTAGGTGGCGCCACCTC+TGG + chr8.1:43163820-43163839 MS.gene63111:CDS 65.0%
GAATGTGGCGCGATCTGCGG+AGG - chr8.1:43163929-43163948 None:intergenic 65.0%
GCTTGCACGGCGACGACAAG+TGG + chr8.1:43163693-43163712 MS.gene63111:CDS 65.0%
TGCACGGCGACGACAAGTGG+AGG + chr8.1:43163696-43163715 MS.gene63111:CDS 65.0%
GGCGGGGGCCAATGGCAGCA+CGG - chr8.1:43164025-43164044 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 43163657 43165289 43163657 ID=MS.gene63111
chr8.1 mRNA 43163657 43165289 43163657 ID=MS.gene63111.t1;Parent=MS.gene63111
chr8.1 exon 43163657 43164138 43163657 ID=MS.gene63111.t1.exon1;Parent=MS.gene63111.t1
chr8.1 CDS 43163657 43164138 43163657 ID=cds.MS.gene63111.t1;Parent=MS.gene63111.t1
chr8.1 exon 43164241 43164646 43164241 ID=MS.gene63111.t1.exon2;Parent=MS.gene63111.t1
chr8.1 CDS 43164241 43164646 43164241 ID=cds.MS.gene63111.t1;Parent=MS.gene63111.t1
chr8.1 exon 43164733 43164882 43164733 ID=MS.gene63111.t1.exon3;Parent=MS.gene63111.t1
chr8.1 CDS 43164733 43164882 43164733 ID=cds.MS.gene63111.t1;Parent=MS.gene63111.t1
chr8.1 exon 43165002 43165289 43165002 ID=MS.gene63111.t1.exon4;Parent=MS.gene63111.t1
chr8.1 CDS 43165002 43165289 43165002 ID=cds.MS.gene63111.t1;Parent=MS.gene63111.t1
Gene Sequence

>MS.gene63111

ATGGCGCCCAAGTTAGCCTCTAAAAGAAAACGAAAAGCTTGCACGGCGACGACAAGTGGAGGCACCCAGATGGACAGATTGAGCAGTCTACCGGACTCAGTTTTGTGTCATATCATGTCCTTCCTCCCAACAATAACGTCCGTTACGACCATGAACTGTTTGTCTTCTAGGTGGCGCCACCTCTGGAAAGATCTTCAGGTGTTCCGCTTCAACGATTGCGACTCAGATAGCTTCAAAAGGTTTGCATTTTTTGTGAACGCTGTGCTTGCCCTCCGCAGATCGCGCCACATTCATAAGTTCCATTTCACCTATGAACTTGATGAACATGACGAGAAGTTTCAAGTCGAATGTATTGAAATGTGGGTCCGTGCTGCCATTGGCCCCCGCCTTGAAGAACTTGATCTCAGCATCGCTGAACTTGAAGCTGATATAAGCCTTCCTCCTTCTTTCTTCATGAGCTGCAACAACCTCGTTTCCCTCAGGTAATTTAATTTAATACAAACAGATTATTATTTATTACTAAGCCCAATTCTTCTCTAAATTAATTACGAAATTGGTGAACTCATGTGTTGGAAACTTTGCAGTCTATCTGGTGGTAAATACAATATGGAGATTAAACATTCTTTAGTGCAATTTCCATCACTGAAGAAGGTGTATCTATGCACAATGGATTTAGATTCGATAGTTGCCTTTCTCTCTGGCTGCCCCAAGCTCGAAGATTTGGAGGTTTACTCTGTATATGGAAACAGTTTGGCTAAAACTTTCTCCAGCTCCAAGAGGTTGTTGAAATACACCAATGATAATTTCACTTGGACTTTTCTTGGTCCTGGTGGCTACAGATTGGGCATTGCAGGCAACTTTCACACTATGGCGGAAGCATTTCTTGATGTCTTCTCCTATTGTCAAAGTGAATTTGTTGACCCTATTCTCAATGACCTTCAAAATGATGATAATGAATTATATCTATTGTCACGTCATTCAACATCAAAGGTGAAGATTTATTTTTATGCTTTATATATAAATATAGTTTGGTACTAATATCATTTCCATCACTTGCCATCATTGTATACATGCAGTGGCCACTTCAGGTTCCTGATATAAATTATCCAGAATTTCGCGATTTAGAACATCTAAAGTTCACTCTTCCCTGTTTTAACTCAAATATTCTGGTCAACGTGCTTGAGAAATGTCATGACCTTAAAGTTCTCATAATCAATAGCCACAAGGTTTGTTCACACTTCTCAAGTTTATTTGAATCCATCTTTGGTCTGTCTATGTATGCATGTATGTATCAATCCGTAAACCACATATATTTTCGAGTCATCTTGTTCCATGTTACTGGTAGGAGGAACCATCATCTTTACGAACATGGGAGCCACAATCAACAACTGTTCCTAGATGTCTCATATCCCACCTGAAGTATATTTGCATAGAAGGATATCAAGGATTTGAAGACGAGCTGACATTTGCCGAATTTATTTTGCGTAACGGACTTGTTTTGGAGACAATGCTTATTTTTGTTGACATTTCACTGGACATAACAAACAAGTACCGTTCTATCAAAAGATTAACAAATATACCGAGGGGATCTGTCACTTGCCAACTTAACTTTGACCCAGTTGGGTCTCCTTAA

Protein sequence

>MS.gene63111.t1

MAPKLASKRKRKACTATTSGGTQMDRLSSLPDSVLCHIMSFLPTITSVTTMNCLSSRWRHLWKDLQVFRFNDCDSDSFKRFAFFVNAVLALRRSRHIHKFHFTYELDEHDEKFQVECIEMWVRAAIGPRLEELDLSIAELEADISLPPSFFMSCNNLVSLSLSGGKYNMEIKHSLVQFPSLKKVYLCTMDLDSIVAFLSGCPKLEDLEVYSVYGNSLAKTFSSSKRLLKYTNDNFTWTFLGPGGYRLGIAGNFHTMAEAFLDVFSYCQSEFVDPILNDLQNDDNELYLLSRHSTSKWPLQVPDINYPEFRDLEHLKFTLPCFNSNILVNVLEKCHDLKVLIINSHKEEPSSLRTWEPQSTTVPRCLISHLKYICIEGYQGFEDELTFAEFILRNGLVLETMLIFVDISLDITNKYRSIKRLTNIPRGSVTCQLNFDPVGSP