Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63111.t1 | XP_003628590.2 | 85.7 | 441 | 55 | 4 | 1 | 441 | 1 | 433 | 1.10E-209 | 739.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63111.t1 | Q9FM89 | 27.3 | 433 | 278 | 14 | 25 | 436 | 6 | 422 | 2.3e-25 | 118.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63111.t1 | G7LEM1 | 85.7 | 441 | 55 | 4 | 1 | 441 | 1 | 433 | 8.1e-210 | 739.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63111.t1 | MTR_8g062310 | 85.714 | 441 | 55 | 4 | 1 | 441 | 1 | 433 | 0.0 | 751 |
MS.gene63111.t1 | MTR_8g070950 | 57.837 | 453 | 157 | 8 | 6 | 441 | 4 | 439 | 5.23e-166 | 474 |
MS.gene63111.t1 | MTR_8g062080 | 57.456 | 456 | 171 | 11 | 1 | 440 | 1 | 449 | 1.05e-162 | 466 |
MS.gene63111.t1 | MTR_8g062010 | 58.237 | 431 | 160 | 7 | 25 | 440 | 9 | 434 | 1.78e-157 | 452 |
MS.gene63111.t1 | MTR_8g062300 | 50.826 | 484 | 191 | 10 | 1 | 440 | 1 | 481 | 5.62e-145 | 422 |
MS.gene63111.t1 | MTR_8g058965 | 54.746 | 453 | 165 | 12 | 24 | 440 | 12 | 460 | 2.76e-144 | 420 |
MS.gene63111.t1 | MTR_8g469020 | 51.429 | 455 | 178 | 9 | 25 | 441 | 7 | 456 | 3.33e-143 | 417 |
MS.gene63111.t1 | MTR_4g050250 | 50.469 | 426 | 161 | 13 | 1 | 382 | 1 | 420 | 6.74e-121 | 359 |
MS.gene63111.t1 | MTR_8g467790 | 47.089 | 395 | 144 | 13 | 24 | 390 | 147 | 504 | 4.32e-94 | 293 |
MS.gene63111.t1 | MTR_2g083840 | 39.168 | 457 | 241 | 12 | 8 | 436 | 10 | 457 | 5.36e-81 | 257 |
MS.gene63111.t1 | MTR_8g468810 | 39.744 | 468 | 241 | 15 | 4 | 436 | 2 | 463 | 7.33e-81 | 257 |
MS.gene63111.t1 | MTR_8g062270 | 38.950 | 457 | 216 | 17 | 24 | 435 | 15 | 453 | 2.54e-78 | 250 |
MS.gene63111.t1 | MTR_8g014260 | 38.362 | 464 | 237 | 16 | 6 | 436 | 4 | 451 | 1.03e-76 | 246 |
MS.gene63111.t1 | MTR_8g058970 | 37.630 | 481 | 243 | 15 | 6 | 436 | 4 | 477 | 3.50e-74 | 240 |
MS.gene63111.t1 | MTR_4g032730 | 38.217 | 471 | 226 | 13 | 19 | 435 | 7 | 466 | 4.96e-74 | 239 |
MS.gene63111.t1 | MTR_8g467800 | 35.957 | 470 | 256 | 13 | 5 | 441 | 1 | 458 | 1.67e-71 | 233 |
MS.gene63111.t1 | MTR_5g092960 | 36.659 | 461 | 240 | 13 | 17 | 435 | 11 | 461 | 1.77e-68 | 225 |
MS.gene63111.t1 | MTR_8g468840 | 37.955 | 440 | 236 | 12 | 25 | 433 | 14 | 447 | 3.94e-65 | 216 |
MS.gene63111.t1 | MTR_8g468760 | 37.778 | 450 | 203 | 16 | 24 | 435 | 8 | 418 | 1.19e-64 | 214 |
MS.gene63111.t1 | MTR_8g077460 | 36.490 | 433 | 199 | 15 | 19 | 436 | 4 | 375 | 9.79e-61 | 202 |
MS.gene63111.t1 | MTR_2g086020 | 67.808 | 146 | 47 | 0 | 296 | 441 | 175 | 320 | 4.75e-60 | 199 |
MS.gene63111.t1 | MTR_2g086020 | 50.000 | 140 | 63 | 3 | 51 | 186 | 1 | 137 | 2.15e-33 | 128 |
MS.gene63111.t1 | MTR_8g445780 | 38.670 | 406 | 212 | 19 | 5 | 389 | 1 | 390 | 2.93e-58 | 196 |
MS.gene63111.t1 | MTR_8g468810 | 39.894 | 376 | 187 | 14 | 4 | 346 | 2 | 371 | 4.16e-56 | 190 |
MS.gene63111.t1 | MTR_8g014160 | 35.616 | 438 | 209 | 15 | 22 | 436 | 38 | 425 | 1.06e-50 | 177 |
MS.gene63111.t1 | MTR_8g468810 | 41.584 | 303 | 146 | 12 | 4 | 280 | 2 | 299 | 7.36e-48 | 167 |
MS.gene63111.t1 | MTR_8g468810 | 41.584 | 303 | 146 | 12 | 4 | 280 | 2 | 299 | 1.15e-47 | 166 |
MS.gene63111.t1 | MTR_8g468810 | 41.584 | 303 | 146 | 12 | 4 | 280 | 2 | 299 | 1.25e-47 | 167 |
MS.gene63111.t1 | MTR_5g092960 | 36.639 | 363 | 185 | 11 | 17 | 341 | 11 | 366 | 4.04e-44 | 159 |
MS.gene63111.t1 | MTR_4g024710 | 37.500 | 280 | 151 | 11 | 176 | 436 | 73 | 347 | 2.10e-39 | 145 |
MS.gene63111.t1 | MTR_8g014210 | 44.086 | 186 | 99 | 5 | 252 | 436 | 50 | 231 | 6.81e-37 | 135 |
MS.gene63111.t1 | MTR_8g467800 | 36.120 | 299 | 162 | 10 | 5 | 280 | 1 | 293 | 9.11e-36 | 135 |
MS.gene63111.t1 | MTR_1g041245 | 28.972 | 428 | 238 | 14 | 24 | 436 | 10 | 386 | 2.11e-34 | 132 |
MS.gene63111.t1 | MTR_5g008950 | 28.774 | 424 | 229 | 18 | 27 | 436 | 1 | 365 | 3.07e-33 | 129 |
MS.gene63111.t1 | MTR_5g021550 | 46.988 | 166 | 73 | 6 | 5 | 160 | 2 | 162 | 4.13e-32 | 120 |
MS.gene63111.t1 | MTR_7g056433 | 27.488 | 422 | 252 | 13 | 25 | 436 | 12 | 389 | 1.48e-31 | 124 |
MS.gene63111.t1 | MTR_7g032380 | 27.230 | 426 | 218 | 13 | 24 | 436 | 10 | 356 | 4.74e-29 | 117 |
MS.gene63111.t1 | MTR_5g084070 | 27.635 | 427 | 270 | 13 | 23 | 428 | 11 | 419 | 5.31e-28 | 115 |
MS.gene63111.t1 | MTR_3g023630 | 28.337 | 427 | 236 | 18 | 22 | 436 | 5 | 373 | 1.05e-27 | 113 |
MS.gene63111.t1 | MTR_1g085120 | 29.157 | 439 | 251 | 17 | 12 | 436 | 79 | 471 | 1.60e-27 | 114 |
MS.gene63111.t1 | MTR_7g098510 | 26.923 | 442 | 258 | 13 | 6 | 436 | 4 | 391 | 2.21e-27 | 113 |
MS.gene63111.t1 | MTR_4g024745 | 35.227 | 264 | 145 | 9 | 176 | 419 | 27 | 284 | 3.04e-27 | 110 |
MS.gene63111.t1 | MTR_1g085120 | 29.157 | 439 | 251 | 17 | 12 | 436 | 154 | 546 | 4.50e-27 | 114 |
MS.gene63111.t1 | MTR_3g108150 | 28.074 | 431 | 233 | 14 | 25 | 435 | 13 | 386 | 5.34e-27 | 112 |
MS.gene63111.t1 | MTR_8g014290 | 42.581 | 155 | 71 | 6 | 23 | 161 | 8 | 160 | 6.35e-27 | 106 |
MS.gene63111.t1 | MTR_3g105060 | 27.098 | 417 | 244 | 15 | 24 | 436 | 13 | 373 | 1.07e-25 | 108 |
MS.gene63111.t1 | MTR_7g032370 | 27.184 | 412 | 227 | 13 | 37 | 436 | 2 | 352 | 2.52e-25 | 106 |
MS.gene63111.t1 | MTR_1089s0010 | 28.440 | 436 | 232 | 23 | 21 | 436 | 4 | 379 | 6.11e-25 | 105 |
MS.gene63111.t1 | MTR_5g073420 | 29.095 | 409 | 213 | 18 | 16 | 408 | 2 | 349 | 6.35e-25 | 105 |
MS.gene63111.t1 | MTR_3g099800 | 58.621 | 87 | 35 | 1 | 348 | 433 | 19 | 105 | 7.42e-25 | 98.6 |
MS.gene63111.t1 | MTR_2g007450 | 27.451 | 459 | 258 | 20 | 9 | 434 | 2 | 418 | 4.59e-24 | 103 |
MS.gene63111.t1 | MTR_5g080710 | 27.356 | 435 | 282 | 16 | 23 | 435 | 31 | 453 | 4.63e-24 | 104 |
MS.gene63111.t1 | MTR_3g107100 | 24.541 | 436 | 263 | 14 | 25 | 439 | 11 | 401 | 7.19e-24 | 103 |
MS.gene63111.t1 | MTR_7g098570 | 26.517 | 445 | 260 | 13 | 2 | 435 | 4 | 392 | 1.52e-23 | 103 |
MS.gene63111.t1 | MTR_7g098480 | 26.829 | 451 | 243 | 15 | 6 | 435 | 4 | 388 | 2.51e-23 | 102 |
MS.gene63111.t1 | MTR_7g026500 | 24.779 | 452 | 256 | 16 | 15 | 439 | 4 | 398 | 4.41e-23 | 100 |
MS.gene63111.t1 | MTR_3g087260 | 26.793 | 474 | 255 | 14 | 25 | 435 | 12 | 456 | 1.30e-22 | 100 |
MS.gene63111.t1 | MTR_6g040270 | 26.835 | 436 | 233 | 19 | 23 | 434 | 6 | 379 | 2.69e-22 | 98.6 |
MS.gene63111.t1 | MTR_7g033915 | 26.402 | 428 | 228 | 16 | 23 | 435 | 9 | 364 | 2.95e-22 | 98.2 |
MS.gene63111.t1 | MTR_1g108820 | 29.070 | 430 | 234 | 18 | 24 | 434 | 7 | 384 | 3.84e-22 | 98.2 |
MS.gene63111.t1 | MTR_7g034115 | 26.683 | 416 | 244 | 14 | 24 | 428 | 10 | 375 | 5.13e-22 | 97.4 |
MS.gene63111.t1 | MTR_7g056420 | 27.578 | 417 | 225 | 17 | 25 | 430 | 9 | 359 | 7.05e-22 | 99.4 |
MS.gene63111.t1 | MTR_5g008920 | 25.404 | 433 | 255 | 14 | 17 | 436 | 4 | 381 | 7.12e-22 | 97.1 |
MS.gene63111.t1 | MTR_7g056430 | 27.578 | 417 | 225 | 17 | 25 | 430 | 9 | 359 | 8.30e-22 | 99.0 |
MS.gene63111.t1 | MTR_3g099830 | 25.290 | 431 | 233 | 15 | 24 | 434 | 11 | 372 | 9.42e-22 | 96.7 |
MS.gene63111.t1 | MTR_7g033990 | 26.559 | 433 | 231 | 17 | 22 | 430 | 8 | 377 | 3.35e-21 | 95.5 |
MS.gene63111.t1 | MTR_2g008320 | 28.378 | 444 | 243 | 21 | 12 | 436 | 40 | 427 | 4.30e-21 | 95.5 |
MS.gene63111.t1 | MTR_3g108560 | 26.353 | 425 | 243 | 13 | 25 | 435 | 20 | 388 | 9.68e-21 | 94.0 |
MS.gene63111.t1 | MTR_2g007400 | 26.862 | 443 | 244 | 19 | 24 | 436 | 11 | 403 | 1.19e-20 | 94.0 |
MS.gene63111.t1 | MTR_1g066830 | 26.037 | 434 | 253 | 17 | 20 | 435 | 3 | 386 | 1.78e-20 | 93.2 |
MS.gene63111.t1 | MTR_3g036250 | 25.647 | 425 | 234 | 16 | 25 | 433 | 5 | 363 | 2.29e-20 | 92.4 |
MS.gene63111.t1 | MTR_6g022500 | 25.761 | 427 | 253 | 18 | 24 | 436 | 100 | 476 | 3.74e-20 | 92.8 |
MS.gene63111.t1 | MTR_7g007080 | 29.234 | 431 | 225 | 19 | 25 | 433 | 4 | 376 | 8.46e-20 | 91.3 |
MS.gene63111.t1 | MTR_7g056287 | 26.230 | 427 | 241 | 16 | 25 | 435 | 3 | 371 | 1.19e-19 | 90.5 |
MS.gene63111.t1 | MTR_5g073370 | 29.369 | 412 | 205 | 20 | 25 | 414 | 5 | 352 | 1.40e-19 | 90.5 |
MS.gene63111.t1 | MTR_5g045170 | 26.316 | 437 | 256 | 16 | 15 | 435 | 4 | 390 | 1.66e-19 | 90.5 |
MS.gene63111.t1 | MTR_7g115270 | 35.533 | 197 | 109 | 8 | 25 | 209 | 12 | 202 | 2.72e-19 | 89.7 |
MS.gene63111.t1 | MTR_8g085430 | 32.857 | 210 | 112 | 7 | 24 | 216 | 10 | 207 | 5.20e-19 | 88.2 |
MS.gene63111.t1 | MTR_7g056447 | 35.263 | 190 | 101 | 8 | 25 | 205 | 9 | 185 | 8.69e-19 | 86.7 |
MS.gene63111.t1 | MTR_3g107120 | 27.752 | 436 | 232 | 19 | 25 | 433 | 9 | 388 | 2.83e-18 | 86.7 |
MS.gene63111.t1 | MTR_4g024720 | 38.182 | 165 | 68 | 8 | 25 | 160 | 17 | 176 | 3.92e-18 | 83.2 |
MS.gene63111.t1 | MTR_0009s0080 | 26.157 | 432 | 262 | 14 | 1 | 422 | 2 | 386 | 5.07e-18 | 86.3 |
MS.gene63111.t1 | MTR_3g107160 | 25.635 | 433 | 258 | 17 | 17 | 436 | 2 | 383 | 1.16e-17 | 84.7 |
MS.gene63111.t1 | MTR_2g007500 | 27.649 | 387 | 201 | 21 | 18 | 383 | 7 | 335 | 1.43e-17 | 84.0 |
MS.gene63111.t1 | MTR_7g055943 | 26.351 | 444 | 241 | 22 | 21 | 436 | 36 | 421 | 1.67e-17 | 84.7 |
MS.gene63111.t1 | MTR_5g083890 | 25.420 | 417 | 231 | 17 | 25 | 406 | 6 | 377 | 7.65e-17 | 83.2 |
MS.gene63111.t1 | MTR_6g044572 | 32.174 | 230 | 122 | 9 | 24 | 223 | 1 | 226 | 9.82e-17 | 82.0 |
MS.gene63111.t1 | MTR_6g044560 | 30.488 | 246 | 137 | 9 | 8 | 223 | 161 | 402 | 1.02e-16 | 82.8 |
MS.gene63111.t1 | MTR_8g014230 | 44.048 | 84 | 45 | 2 | 346 | 429 | 17 | 98 | 1.78e-16 | 75.1 |
MS.gene63111.t1 | MTR_7g075820 | 24.658 | 438 | 251 | 20 | 25 | 434 | 6 | 392 | 2.63e-16 | 80.9 |
MS.gene63111.t1 | MTR_5g058000 | 33.000 | 200 | 107 | 9 | 20 | 207 | 3 | 187 | 4.93e-16 | 79.7 |
MS.gene63111.t1 | MTR_6g022360 | 24.821 | 419 | 255 | 14 | 24 | 435 | 42 | 407 | 8.17e-16 | 79.3 |
MS.gene63111.t1 | MTR_4g098590 | 25.879 | 398 | 230 | 16 | 27 | 403 | 1 | 354 | 8.39e-16 | 79.0 |
MS.gene63111.t1 | MTR_1g085120 | 33.023 | 215 | 123 | 9 | 12 | 216 | 166 | 369 | 1.80e-15 | 78.6 |
MS.gene63111.t1 | MTR_7g034110 | 28.859 | 298 | 174 | 11 | 24 | 310 | 10 | 280 | 1.90e-15 | 77.8 |
MS.gene63111.t1 | MTR_6g045333 | 24.944 | 445 | 268 | 16 | 11 | 435 | 47 | 445 | 2.59e-15 | 78.2 |
MS.gene63111.t1 | MTR_6g011460 | 33.333 | 207 | 119 | 9 | 20 | 218 | 41 | 236 | 2.61e-15 | 77.8 |
MS.gene63111.t1 | MTR_1g053025 | 25.282 | 443 | 241 | 18 | 24 | 433 | 1 | 386 | 2.74e-15 | 77.8 |
MS.gene63111.t1 | MTR_5g045510 | 30.909 | 220 | 137 | 7 | 19 | 232 | 6 | 216 | 2.75e-15 | 77.4 |
MS.gene63111.t1 | MTR_1g038710 | 31.760 | 233 | 139 | 10 | 8 | 227 | 2 | 227 | 8.34e-15 | 76.6 |
MS.gene63111.t1 | MTR_7g114710 | 31.217 | 189 | 120 | 5 | 24 | 208 | 12 | 194 | 9.70e-15 | 75.9 |
MS.gene63111.t1 | MTR_7g084080 | 36.774 | 155 | 86 | 6 | 10 | 162 | 2 | 146 | 1.15e-14 | 74.7 |
MS.gene63111.t1 | MTR_4g056020 | 27.166 | 427 | 241 | 17 | 25 | 404 | 9 | 412 | 1.41e-14 | 75.9 |
MS.gene63111.t1 | MTR_3g071850 | 25.117 | 426 | 257 | 15 | 21 | 428 | 20 | 401 | 1.54e-14 | 76.6 |
MS.gene63111.t1 | MTR_3g467400 | 29.412 | 204 | 121 | 7 | 25 | 210 | 3 | 201 | 1.68e-14 | 75.1 |
MS.gene63111.t1 | MTR_3g467400 | 39.080 | 87 | 51 | 1 | 350 | 436 | 283 | 367 | 6.53e-11 | 63.9 |
MS.gene63111.t1 | MTR_1g107385 | 24.943 | 441 | 249 | 17 | 25 | 434 | 32 | 421 | 1.91e-14 | 75.1 |
MS.gene63111.t1 | MTR_4g056030 | 26.535 | 456 | 262 | 19 | 18 | 428 | 2 | 429 | 2.45e-14 | 75.1 |
MS.gene63111.t1 | MTR_5g061680 | 34.146 | 205 | 117 | 9 | 16 | 211 | 2 | 197 | 2.69e-14 | 73.9 |
MS.gene63111.t1 | MTR_3g026920 | 25.835 | 449 | 234 | 21 | 22 | 433 | 16 | 402 | 4.70e-14 | 73.9 |
MS.gene63111.t1 | MTR_7g007340 | 29.534 | 193 | 106 | 5 | 23 | 212 | 11 | 176 | 2.03e-13 | 71.6 |
MS.gene63111.t1 | MTR_5g058100 | 31.034 | 203 | 114 | 8 | 19 | 209 | 3 | 191 | 2.41e-13 | 71.6 |
MS.gene63111.t1 | MTR_4g113810 | 36.220 | 127 | 78 | 2 | 110 | 233 | 11 | 137 | 3.40e-13 | 67.8 |
MS.gene63111.t1 | MTR_3g108560 | 31.746 | 189 | 111 | 6 | 25 | 209 | 20 | 194 | 5.65e-13 | 70.1 |
MS.gene63111.t1 | MTR_8g066650 | 31.068 | 206 | 112 | 8 | 25 | 227 | 80 | 258 | 6.33e-13 | 70.9 |
MS.gene63111.t1 | MTR_6g018660 | 35.955 | 178 | 98 | 8 | 21 | 186 | 16 | 189 | 7.64e-13 | 70.1 |
MS.gene63111.t1 | MTR_3g040700 | 24.638 | 207 | 128 | 6 | 22 | 214 | 40 | 232 | 1.13e-12 | 69.7 |
MS.gene63111.t1 | MTR_3g115430 | 35.135 | 111 | 66 | 3 | 327 | 436 | 20 | 125 | 2.26e-12 | 64.3 |
MS.gene63111.t1 | MTR_1g108820 | 34.211 | 190 | 107 | 8 | 24 | 207 | 7 | 184 | 3.08e-12 | 68.2 |
MS.gene63111.t1 | MTR_1g013560 | 24.554 | 448 | 284 | 18 | 9 | 423 | 3 | 429 | 3.31e-12 | 68.6 |
MS.gene63111.t1 | MTR_1g077420 | 29.018 | 224 | 141 | 9 | 23 | 236 | 2 | 217 | 3.67e-12 | 67.0 |
MS.gene63111.t1 | MTR_3g023270 | 33.333 | 144 | 86 | 4 | 23 | 165 | 10 | 144 | 3.80e-12 | 67.8 |
MS.gene63111.t1 | MTR_2g005990 | 29.412 | 204 | 126 | 9 | 24 | 212 | 5 | 205 | 1.22e-11 | 66.6 |
MS.gene63111.t1 | MTR_2g082800 | 23.134 | 402 | 253 | 12 | 25 | 394 | 27 | 404 | 1.48e-11 | 66.2 |
MS.gene63111.t1 | MTR_3g023470 | 34.532 | 139 | 77 | 4 | 25 | 160 | 15 | 142 | 2.73e-11 | 65.5 |
MS.gene63111.t1 | MTR_3g095640 | 33.766 | 154 | 91 | 6 | 21 | 166 | 14 | 164 | 3.27e-11 | 62.4 |
MS.gene63111.t1 | MTR_3g048290 | 29.032 | 217 | 134 | 9 | 24 | 227 | 22 | 231 | 3.87e-11 | 65.1 |
MS.gene63111.t1 | MTR_7g021630 | 26.687 | 326 | 185 | 13 | 25 | 316 | 17 | 322 | 3.96e-11 | 64.7 |
MS.gene63111.t1 | MTR_7g021630 | 26.687 | 326 | 185 | 13 | 25 | 316 | 17 | 322 | 4.44e-11 | 64.7 |
MS.gene63111.t1 | MTR_3g095600 | 29.384 | 211 | 110 | 10 | 24 | 223 | 3 | 185 | 5.85e-11 | 63.5 |
MS.gene63111.t1 | MTR_4g134150 | 32.620 | 187 | 110 | 8 | 25 | 208 | 14 | 187 | 5.92e-11 | 62.8 |
MS.gene63111.t1 | MTR_4g093690 | 27.758 | 281 | 162 | 15 | 12 | 273 | 5 | 263 | 9.13e-11 | 62.8 |
MS.gene63111.t1 | MTR_8g465650 | 29.098 | 244 | 149 | 11 | 25 | 256 | 12 | 243 | 9.22e-11 | 63.5 |
MS.gene63111.t1 | MTR_7g088260 | 32.124 | 193 | 118 | 8 | 19 | 207 | 85 | 268 | 9.48e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63111.t1 | AT4G10400 | 27.765 | 425 | 277 | 13 | 24 | 435 | 1 | 408 | 4.33e-28 | 115 |
MS.gene63111.t1 | AT4G10400 | 27.765 | 425 | 277 | 13 | 24 | 435 | 1 | 408 | 4.33e-28 | 115 |
MS.gene63111.t1 | AT4G10400 | 27.765 | 425 | 277 | 13 | 24 | 435 | 1 | 408 | 4.33e-28 | 115 |
MS.gene63111.t1 | AT5G56420 | 28.281 | 442 | 262 | 16 | 25 | 436 | 6 | 422 | 4.62e-28 | 115 |
MS.gene63111.t1 | AT5G56420 | 28.281 | 442 | 262 | 16 | 25 | 436 | 6 | 422 | 4.62e-28 | 115 |
MS.gene63111.t1 | AT5G56420 | 28.281 | 442 | 262 | 16 | 25 | 436 | 6 | 422 | 4.62e-28 | 115 |
MS.gene63111.t1 | AT1G78750 | 25.272 | 459 | 282 | 19 | 20 | 433 | 13 | 455 | 8.29e-26 | 109 |
MS.gene63111.t1 | AT1G78750 | 25.272 | 459 | 282 | 19 | 20 | 433 | 13 | 455 | 8.29e-26 | 109 |
MS.gene63111.t1 | AT5G56370 | 26.386 | 451 | 262 | 17 | 24 | 435 | 1 | 420 | 9.27e-23 | 100 |
MS.gene63111.t1 | AT5G56370 | 26.386 | 451 | 262 | 17 | 24 | 435 | 1 | 420 | 9.27e-23 | 100 |
MS.gene63111.t1 | AT1G32375 | 28.381 | 451 | 256 | 20 | 24 | 436 | 1 | 422 | 2.07e-22 | 99.4 |
MS.gene63111.t1 | AT1G32375 | 28.381 | 451 | 256 | 20 | 24 | 436 | 1 | 422 | 2.07e-22 | 99.4 |
MS.gene63111.t1 | AT1G16930 | 27.426 | 474 | 263 | 23 | 15 | 436 | 5 | 449 | 2.59e-22 | 99.4 |
MS.gene63111.t1 | AT1G16930 | 27.426 | 474 | 263 | 23 | 15 | 436 | 5 | 449 | 2.59e-22 | 99.4 |
MS.gene63111.t1 | AT1G16930 | 27.426 | 474 | 263 | 23 | 15 | 436 | 5 | 449 | 2.59e-22 | 99.4 |
MS.gene63111.t1 | AT5G38570 | 26.790 | 433 | 238 | 16 | 24 | 435 | 1 | 375 | 4.44e-21 | 94.7 |
MS.gene63111.t1 | AT5G53635 | 25.714 | 455 | 261 | 16 | 27 | 435 | 2 | 425 | 7.91e-21 | 94.7 |
MS.gene63111.t1 | AT5G56400 | 24.726 | 457 | 304 | 15 | 4 | 436 | 15 | 455 | 1.71e-20 | 94.0 |
MS.gene63111.t1 | AT1G66310 | 26.116 | 448 | 269 | 17 | 23 | 433 | 17 | 439 | 3.53e-20 | 92.8 |
MS.gene63111.t1 | AT1G78760 | 24.336 | 452 | 287 | 18 | 22 | 437 | 13 | 445 | 4.51e-20 | 92.8 |
MS.gene63111.t1 | AT5G53840 | 26.293 | 464 | 273 | 21 | 10 | 433 | 3 | 437 | 8.21e-20 | 91.7 |
MS.gene63111.t1 | AT1G69630 | 24.779 | 452 | 286 | 15 | 20 | 433 | 13 | 448 | 9.04e-20 | 91.7 |
MS.gene63111.t1 | AT4G13965 | 27.626 | 438 | 271 | 20 | 20 | 433 | 5 | 420 | 1.25e-19 | 90.9 |
MS.gene63111.t1 | AT5G56560 | 26.846 | 447 | 263 | 20 | 23 | 436 | 3 | 418 | 2.20e-19 | 90.1 |
MS.gene63111.t1 | AT5G22610 | 23.702 | 443 | 277 | 15 | 25 | 433 | 18 | 433 | 3.11e-19 | 90.1 |
MS.gene63111.t1 | AT5G22670 | 25.522 | 431 | 248 | 19 | 16 | 399 | 2 | 406 | 4.45e-19 | 89.7 |
MS.gene63111.t1 | AT1G51370 | 24.444 | 450 | 296 | 17 | 5 | 431 | 2 | 430 | 5.91e-19 | 89.0 |
MS.gene63111.t1 | AT4G26340 | 27.152 | 453 | 256 | 20 | 24 | 436 | 1 | 419 | 6.60e-19 | 89.0 |
MS.gene63111.t1 | AT4G09920 | 34.184 | 196 | 107 | 7 | 24 | 209 | 1 | 184 | 9.59e-19 | 86.7 |
MS.gene63111.t1 | AT4G09920 | 34.184 | 196 | 107 | 7 | 24 | 209 | 1 | 184 | 9.59e-19 | 86.7 |
MS.gene63111.t1 | AT4G09920 | 34.184 | 196 | 107 | 7 | 24 | 209 | 1 | 184 | 9.59e-19 | 86.7 |
MS.gene63111.t1 | AT4G09920 | 34.184 | 196 | 107 | 7 | 24 | 209 | 1 | 184 | 9.83e-19 | 87.0 |
MS.gene63111.t1 | AT4G09920 | 34.184 | 196 | 107 | 7 | 24 | 209 | 1 | 184 | 9.83e-19 | 87.0 |
MS.gene63111.t1 | AT2G26030 | 26.797 | 459 | 267 | 20 | 25 | 433 | 4 | 443 | 3.92e-18 | 86.7 |
MS.gene63111.t1 | AT3G59200 | 33.168 | 202 | 111 | 8 | 25 | 212 | 7 | 198 | 5.34e-18 | 85.5 |
MS.gene63111.t1 | AT1G66300 | 24.946 | 465 | 288 | 19 | 9 | 433 | 10 | 453 | 6.46e-18 | 86.3 |
MS.gene63111.t1 | AT5G38590 | 25.647 | 425 | 265 | 15 | 24 | 421 | 1 | 401 | 9.18e-18 | 85.5 |
MS.gene63111.t1 | AT3G59200 | 33.168 | 202 | 111 | 8 | 25 | 212 | 7 | 198 | 2.23e-17 | 84.7 |
MS.gene63111.t1 | AT5G56440 | 26.622 | 447 | 275 | 18 | 24 | 435 | 1 | 429 | 2.42e-17 | 84.3 |
MS.gene63111.t1 | AT5G50270 | 27.294 | 436 | 248 | 18 | 24 | 418 | 1 | 408 | 3.25e-17 | 83.6 |
MS.gene63111.t1 | AT5G22660 | 25.325 | 462 | 263 | 17 | 25 | 434 | 13 | 444 | 4.78e-17 | 83.6 |
MS.gene63111.t1 | AT3G50710 | 27.051 | 451 | 267 | 22 | 24 | 436 | 1 | 427 | 6.69e-17 | 82.8 |
MS.gene63111.t1 | AT5G22720 | 23.218 | 491 | 290 | 17 | 5 | 435 | 1 | 464 | 7.88e-17 | 82.8 |
MS.gene63111.t1 | AT2G04230 | 26.368 | 402 | 251 | 18 | 25 | 395 | 13 | 400 | 8.02e-17 | 82.8 |
MS.gene63111.t1 | AT2G26030 | 26.696 | 457 | 265 | 20 | 25 | 433 | 4 | 438 | 1.32e-16 | 82.0 |
MS.gene63111.t1 | AT2G26030 | 26.696 | 457 | 265 | 20 | 25 | 433 | 4 | 438 | 1.32e-16 | 82.0 |
MS.gene63111.t1 | AT5G44950 | 25.236 | 424 | 257 | 19 | 25 | 406 | 4 | 409 | 3.43e-16 | 80.9 |
MS.gene63111.t1 | AT5G22700 | 25.275 | 364 | 231 | 12 | 25 | 377 | 43 | 376 | 9.09e-16 | 79.3 |
MS.gene63111.t1 | AT5G22610 | 22.410 | 473 | 276 | 16 | 25 | 433 | 18 | 463 | 1.51e-15 | 79.0 |
MS.gene63111.t1 | AT3G56780 | 22.998 | 487 | 280 | 13 | 27 | 438 | 9 | 475 | 1.69e-15 | 79.0 |
MS.gene63111.t1 | AT5G56410 | 25.527 | 427 | 258 | 16 | 24 | 405 | 1 | 412 | 3.09e-15 | 78.2 |
MS.gene63111.t1 | AT5G22700 | 31.795 | 195 | 113 | 7 | 25 | 212 | 6 | 187 | 5.24e-15 | 77.0 |
MS.gene63111.t1 | AT5G22700 | 31.795 | 195 | 113 | 7 | 25 | 212 | 6 | 187 | 5.24e-15 | 77.0 |
MS.gene63111.t1 | AT5G22700 | 31.795 | 195 | 113 | 7 | 25 | 212 | 6 | 187 | 5.24e-15 | 77.0 |
MS.gene63111.t1 | AT5G22700 | 31.795 | 195 | 113 | 7 | 25 | 212 | 6 | 187 | 5.24e-15 | 77.0 |
MS.gene63111.t1 | AT3G58920 | 26.403 | 481 | 273 | 21 | 24 | 435 | 1 | 469 | 5.38e-15 | 77.4 |
MS.gene63111.t1 | AT5G22700 | 31.795 | 195 | 113 | 7 | 25 | 212 | 43 | 224 | 5.70e-15 | 77.0 |
MS.gene63111.t1 | AT1G51370 | 24.552 | 391 | 254 | 15 | 5 | 373 | 2 | 373 | 9.13e-15 | 76.3 |
MS.gene63111.t1 | AT4G00160 | 27.563 | 439 | 277 | 19 | 25 | 435 | 16 | 441 | 1.38e-14 | 75.9 |
MS.gene63111.t1 | AT1G66300 | 23.947 | 451 | 264 | 21 | 9 | 433 | 10 | 407 | 1.87e-14 | 75.5 |
MS.gene63111.t1 | AT1G55030 | 24.939 | 409 | 265 | 18 | 8 | 394 | 2 | 390 | 3.44e-14 | 74.7 |
MS.gene63111.t1 | AT1G55030 | 25.505 | 396 | 253 | 18 | 21 | 394 | 5 | 380 | 3.65e-14 | 74.3 |
MS.gene63111.t1 | AT5G18780 | 26.580 | 459 | 264 | 16 | 21 | 433 | 7 | 438 | 4.10e-14 | 74.3 |
MS.gene63111.t1 | AT5G18780 | 26.580 | 459 | 264 | 16 | 21 | 433 | 7 | 438 | 4.10e-14 | 74.3 |
MS.gene63111.t1 | AT3G26922 | 26.894 | 264 | 166 | 11 | 19 | 273 | 8 | 253 | 4.41e-14 | 73.2 |
MS.gene63111.t1 | AT3G26922 | 26.894 | 264 | 166 | 11 | 19 | 273 | 8 | 253 | 4.41e-14 | 73.2 |
MS.gene63111.t1 | AT5G53640 | 28.571 | 210 | 135 | 6 | 8 | 214 | 5 | 202 | 6.89e-14 | 71.2 |
MS.gene63111.t1 | AT3G60040 | 29.469 | 207 | 120 | 8 | 25 | 210 | 13 | 214 | 1.13e-13 | 73.6 |
MS.gene63111.t1 | AT3G60040 | 29.469 | 207 | 120 | 8 | 25 | 210 | 232 | 433 | 1.28e-13 | 73.6 |
MS.gene63111.t1 | AT3G60040 | 29.469 | 207 | 120 | 8 | 25 | 210 | 233 | 434 | 1.30e-13 | 73.6 |
MS.gene63111.t1 | AT3G60040 | 29.469 | 207 | 120 | 8 | 25 | 210 | 230 | 431 | 1.34e-13 | 73.6 |
MS.gene63111.t1 | AT3G60040 | 29.469 | 207 | 120 | 8 | 25 | 210 | 232 | 433 | 1.39e-13 | 73.2 |
MS.gene63111.t1 | AT1G66320 | 23.899 | 477 | 280 | 21 | 7 | 433 | 11 | 454 | 2.69e-13 | 72.0 |
MS.gene63111.t1 | AT5G56380 | 24.229 | 454 | 288 | 14 | 24 | 436 | 1 | 439 | 2.96e-13 | 71.6 |
MS.gene63111.t1 | AT5G56380 | 24.229 | 454 | 288 | 14 | 24 | 436 | 1 | 439 | 2.96e-13 | 71.6 |
MS.gene63111.t1 | AT5G62970 | 24.524 | 473 | 271 | 18 | 24 | 435 | 1 | 448 | 3.65e-13 | 71.6 |
MS.gene63111.t1 | AT4G14096 | 31.443 | 194 | 111 | 9 | 25 | 207 | 8 | 190 | 4.00e-13 | 71.6 |
MS.gene63111.t1 | AT4G14096 | 31.443 | 194 | 111 | 9 | 25 | 207 | 8 | 190 | 4.00e-13 | 71.6 |
MS.gene63111.t1 | AT3G49030 | 24.946 | 461 | 301 | 21 | 5 | 438 | 1 | 443 | 5.36e-13 | 70.9 |
MS.gene63111.t1 | AT5G38590 | 30.729 | 192 | 119 | 6 | 24 | 210 | 1 | 183 | 8.04e-13 | 69.3 |
MS.gene63111.t1 | AT5G41840 | 30.045 | 223 | 118 | 11 | 9 | 207 | 2 | 210 | 2.22e-12 | 69.3 |
MS.gene63111.t1 | AT5G22660 | 29.717 | 212 | 127 | 6 | 25 | 228 | 13 | 210 | 2.35e-12 | 68.2 |
MS.gene63111.t1 | AT1G13780 | 25.175 | 429 | 255 | 18 | 25 | 403 | 10 | 422 | 3.82e-12 | 68.6 |
MS.gene63111.t1 | AT3G59240 | 27.706 | 231 | 135 | 8 | 25 | 237 | 8 | 224 | 8.36e-12 | 67.4 |
MS.gene63111.t1 | AT5G50270 | 31.658 | 199 | 109 | 7 | 24 | 209 | 1 | 185 | 9.88e-12 | 66.2 |
MS.gene63111.t1 | AT1G66640 | 24.020 | 408 | 248 | 17 | 58 | 433 | 36 | 413 | 1.05e-11 | 67.0 |
MS.gene63111.t1 | AT1G51370 | 23.836 | 365 | 239 | 14 | 5 | 350 | 2 | 346 | 2.18e-11 | 65.5 |
MS.gene63111.t1 | AT1G06630 | 28.440 | 218 | 135 | 8 | 25 | 227 | 12 | 223 | 3.12e-11 | 64.7 |
MS.gene63111.t1 | AT1G06630 | 28.440 | 218 | 135 | 8 | 25 | 227 | 12 | 223 | 3.49e-11 | 65.1 |
MS.gene63111.t1 | AT1G06630 | 28.440 | 218 | 135 | 8 | 25 | 227 | 12 | 223 | 3.49e-11 | 65.1 |
MS.gene63111.t1 | AT1G06630 | 28.440 | 218 | 135 | 8 | 25 | 227 | 12 | 223 | 4.72e-11 | 64.7 |
MS.gene63111.t1 | AT1G06630 | 28.440 | 218 | 135 | 8 | 25 | 227 | 12 | 223 | 4.72e-11 | 64.7 |
MS.gene63111.t1 | AT1G06630 | 28.440 | 218 | 135 | 8 | 25 | 227 | 12 | 223 | 4.72e-11 | 64.7 |
MS.gene63111.t1 | AT1G06630 | 28.440 | 218 | 135 | 8 | 25 | 227 | 12 | 223 | 4.72e-11 | 64.7 |
MS.gene63111.t1 | AT1G06630 | 28.440 | 218 | 135 | 8 | 25 | 227 | 21 | 232 | 5.04e-11 | 64.7 |
MS.gene63111.t1 | AT1G06630 | 28.440 | 218 | 135 | 8 | 25 | 227 | 12 | 223 | 5.81e-11 | 64.7 |
MS.gene63111.t1 | AT1G60400 | 30.332 | 211 | 126 | 9 | 15 | 215 | 4 | 203 | 9.82e-11 | 63.9 |
Find 100 sgRNAs with CRISPR-Local
Find 130 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCATGAACTGTTTGTCTTCT+AGG | 0.173631 | 8.1:+43163805 | MS.gene63111:CDS |
TATTGATTATGAGAACTTTA+AGG | 0.213840 | 8.1:-43164852 | None:intergenic |
TGTTCTAAATCGCGAAATTC+TGG | 0.261819 | 8.1:-43164763 | None:intergenic |
TTGGAGGTTTACTCTGTATA+TGG | 0.269027 | 8.1:+43164377 | MS.gene63111:CDS |
GACTGCTCAATCTGTCCATC+TGG | 0.287385 | 8.1:-43163722 | None:intergenic |
TTTGCGTAACGGACTTGTTT+TGG | 0.295622 | 8.1:+43165136 | MS.gene63111:CDS |
CAGAATATTTGAGTTAAAAC+AGG | 0.317327 | 8.1:-43164803 | None:intergenic |
GGCTACAGATTGGGCATTGC+AGG | 0.324307 | 8.1:+43164488 | MS.gene63111:CDS |
CTGCCCCAAGCTCGAAGATT+TGG | 0.324654 | 8.1:+43164358 | MS.gene63111:CDS |
AATTCTGGATAATTTATATC+AGG | 0.327966 | 8.1:-43164748 | None:intergenic |
CTGAAGTATATTTGCATAGA+AGG | 0.331495 | 8.1:+43165071 | MS.gene63111:CDS |
ACCTCCAAATCTTCGAGCTT+GGG | 0.334626 | 8.1:-43164362 | None:intergenic |
TTTGAAGGTCATTGAGAATA+GGG | 0.335744 | 8.1:-43164577 | None:intergenic |
CTCTGTATATGGAAACAGTT+TGG | 0.343156 | 8.1:+43164388 | MS.gene63111:CDS |
GACCCAGTTGGGTCTCCTTA+AGG | 0.346670 | 8.1:+43165269 | MS.gene63111:CDS |
CCACCTCTGGAAAGATCTTC+AGG | 0.351277 | 8.1:+43163833 | MS.gene63111:CDS |
CATCAAGTTCATAGGTGAAA+TGG | 0.356899 | 8.1:-43163956 | None:intergenic |
AACAAATTCACTTTGACAAT+AGG | 0.361112 | 8.1:-43164552 | None:intergenic |
AACTTAACTTTGACCCAGTT+GGG | 0.361183 | 8.1:+43165258 | MS.gene63111:CDS |
CTTCTAGGTGGCGCCACCTC+TGG | 0.361912 | 8.1:+43163820 | MS.gene63111:CDS |
TGGAAACTTTGCAGTCTATC+TGG | 0.377861 | 8.1:+43164227 | MS.gene63111:intron |
ATACATGCAGTGGCCACTTC+AGG | 0.378400 | 8.1:+43164723 | MS.gene63111:intron |
ATCTGGTGGTAAATACAATA+TGG | 0.383544 | 8.1:+43164244 | MS.gene63111:CDS |
TGGTCCTGGTGGCTACAGAT+TGG | 0.386642 | 8.1:+43164478 | MS.gene63111:CDS |
TCGATAGTTGCCTTTCTCTC+TGG | 0.388772 | 8.1:+43164335 | MS.gene63111:CDS |
CTTCTATGCAAATATACTTC+AGG | 0.390562 | 8.1:-43165070 | None:intergenic |
TGCAGGCAACTTTCACACTA+TGG | 0.398879 | 8.1:+43164505 | MS.gene63111:CDS |
GGTCCTGGTGGCTACAGATT+GGG | 0.408891 | 8.1:+43164479 | MS.gene63111:CDS |
CCTAGAAGACAAACAGTTCA+TGG | 0.412239 | 8.1:-43163805 | None:intergenic |
CCCCAAGCTCGAAGATTTGG+AGG | 0.425439 | 8.1:+43164361 | MS.gene63111:CDS |
GTCGTAACGGACGTTATTGT+TGG | 0.432085 | 8.1:-43163783 | None:intergenic |
GGTGTATTTCAACAACCTCT+TGG | 0.433361 | 8.1:-43164429 | None:intergenic |
TCCGTTACGCAAAATAAATT+CGG | 0.437038 | 8.1:-43165126 | None:intergenic |
GTACCTTAAGGAGACCCAAC+TGG | 0.439120 | 8.1:-43165272 | None:intergenic |
CTTGGGGCAGCCAGAGAGAA+AGG | 0.442176 | 8.1:-43164345 | None:intergenic |
AACCTCCAAATCTTCGAGCT+TGG | 0.455915 | 8.1:-43164363 | None:intergenic |
AGTCCAAGTGAAATTATCAT+TGG | 0.470068 | 8.1:-43164450 | None:intergenic |
CAACTTAACTTTGACCCAGT+TGG | 0.473431 | 8.1:+43165257 | MS.gene63111:CDS |
TGCTGAGATCAAGTTCTTCA+AGG | 0.477803 | 8.1:-43164043 | None:intergenic |
GAGATCAAGTTCTTCAAGGC+GGG | 0.479212 | 8.1:-43164039 | None:intergenic |
AGGTGGGATATGAGACATCT+AGG | 0.488525 | 8.1:-43165050 | None:intergenic |
ATTTGCATAGAAGGATATCA+AGG | 0.494802 | 8.1:+43165080 | MS.gene63111:CDS |
AAGTCGAATGTATTGAAATG+TGG | 0.501176 | 8.1:+43163997 | MS.gene63111:CDS |
GTCATGTTCATCAAGTTCAT+AGG | 0.502093 | 8.1:-43163964 | None:intergenic |
TTTCAACAACCTCTTGGAGC+TGG | 0.503440 | 8.1:-43164423 | None:intergenic |
GGACGTTATTGTTGGGAGGA+AGG | 0.509138 | 8.1:-43163775 | None:intergenic |
GCGACTCAGATAGCTTCAAA+AGG | 0.522015 | 8.1:+43163874 | MS.gene63111:CDS |
GCAATTTCCATCACTGAAGA+AGG | 0.523230 | 8.1:+43164286 | MS.gene63111:CDS |
CCTCCAAATCTTCGAGCTTG+GGG | 0.531990 | 8.1:-43164361 | None:intergenic |
GCAACAACCTCGTTTCCCTC+AGG | 0.532637 | 8.1:+43164117 | MS.gene63111:CDS |
ATGTGGGTCCGTGCTGCCAT+TGG | 0.533953 | 8.1:+43164014 | MS.gene63111:CDS |
CAACTGGGTCAAAGTTAAGT+TGG | 0.536445 | 8.1:-43165256 | None:intergenic |
TCGTAACGGACGTTATTGTT+GGG | 0.536686 | 8.1:-43163782 | None:intergenic |
GCTTGCACGGCGACGACAAG+TGG | 0.537318 | 8.1:+43163693 | MS.gene63111:CDS |
CTAGGAACAGTTGTTGATTG+TGG | 0.543151 | 8.1:-43165032 | None:intergenic |
CTATGCAAATATACTTCAGG+TGG | 0.545118 | 8.1:-43165067 | None:intergenic |
ATATGACACAAAACTGAGTC+CGG | 0.545120 | 8.1:-43163747 | None:intergenic |
TCCCATGTTCGTAAAGATGA+TGG | 0.547163 | 8.1:-43165008 | None:intergenic |
AACCATCATCTTTACGAACA+TGG | 0.549310 | 8.1:+43165006 | MS.gene63111:CDS |
GAATGTGGCGCGATCTGCGG+AGG | 0.549789 | 8.1:-43163926 | None:intergenic |
AGATACACCTTCTTCAGTGA+TGG | 0.559803 | 8.1:-43164293 | None:intergenic |
ACTGCTCAATCTGTCCATCT+GGG | 0.561303 | 8.1:-43163721 | None:intergenic |
GGACAGATTGAGCAGTCTAC+CGG | 0.562892 | 8.1:+43163728 | MS.gene63111:CDS |
TTGCAGCTCATGAAGAAAGA+AGG | 0.565936 | 8.1:-43164098 | None:intergenic |
AGATCAAGTTCTTCAAGGCG+GGG | 0.574749 | 8.1:-43164038 | None:intergenic |
AGTCGAATGTATTGAAATGT+GGG | 0.575102 | 8.1:+43163998 | MS.gene63111:CDS |
ACCATCATCTTTACGAACAT+GGG | 0.576385 | 8.1:+43165007 | MS.gene63111:CDS |
TTTATATCAGGAACCTGAAG+TGG | 0.582063 | 8.1:-43164736 | None:intergenic |
AAGATTAACAAATATACCGA+GGG | 0.582923 | 8.1:+43165220 | MS.gene63111:CDS |
ACACCAATGATAATTTCACT+TGG | 0.587332 | 8.1:+43164447 | MS.gene63111:CDS |
GTCACGTCATTCAACATCAA+AGG | 0.588332 | 8.1:+43164625 | MS.gene63111:CDS |
GACAAGTGGAGGCACCCAGA+TGG | 0.590276 | 8.1:+43163707 | MS.gene63111:CDS |
CTGAGTCGCAATCGTTGAAG+CGG | 0.591203 | 8.1:-43163860 | None:intergenic |
TACCTTAAGGAGACCCAACT+GGG | 0.595328 | 8.1:-43165271 | None:intergenic |
ATGCCCAATCTGTAGCCACC+AGG | 0.596978 | 8.1:-43164482 | None:intergenic |
GATCAAGTTCTTCAAGGCGG+GGG | 0.598443 | 8.1:-43164037 | None:intergenic |
TCATGAAGAAAGAAGGAGGA+AGG | 0.602375 | 8.1:-43164091 | None:intergenic |
TGCACGGCGACGACAAGTGG+AGG | 0.607534 | 8.1:+43163696 | MS.gene63111:CDS |
TATGAATGTGGCGCGATCTG+CGG | 0.615178 | 8.1:-43163929 | None:intergenic |
CCTGAAGATCTTTCCAGAGG+TGG | 0.623862 | 8.1:-43163833 | None:intergenic |
AAGAAAACGAAAAGCTTGCA+CGG | 0.629248 | 8.1:+43163680 | MS.gene63111:CDS |
TAAATTACCTGAGGGAAACG+AGG | 0.631468 | 8.1:-43164124 | None:intergenic |
AATGTGGCGCGATCTGCGGA+GGG | 0.637434 | 8.1:-43163925 | None:intergenic |
AAAGATTAACAAATATACCG+AGG | 0.643261 | 8.1:+43165219 | MS.gene63111:CDS |
AAACTTTGCAGTCTATCTGG+TGG | 0.646236 | 8.1:+43164230 | MS.gene63111:intron |
AAACTTTCTCCAGCTCCAAG+AGG | 0.646864 | 8.1:+43164414 | MS.gene63111:CDS |
CAAACAGTTCATGGTCGTAA+CGG | 0.647673 | 8.1:-43163796 | None:intergenic |
TAACGGACGTTATTGTTGGG+AGG | 0.653327 | 8.1:-43163779 | None:intergenic |
CAGCTCATGAAGAAAGAAGG+AGG | 0.655168 | 8.1:-43164095 | None:intergenic |
AGAATATTTGAGTTAAAACA+GGG | 0.665389 | 8.1:-43164802 | None:intergenic |
TGAAATGGAACTTATGAATG+TGG | 0.667776 | 8.1:-43163941 | None:intergenic |
TGAACTGTTTGTCTTCTAGG+TGG | 0.668870 | 8.1:+43163808 | MS.gene63111:CDS |
TATGCAAATATACTTCAGGT+GGG | 0.673254 | 8.1:-43165066 | None:intergenic |
GAAGGTGTATCTATGCACAA+TGG | 0.675705 | 8.1:+43164304 | MS.gene63111:CDS |
TCTCATAATCAATAGCCACA+AGG | 0.678177 | 8.1:+43164861 | MS.gene63111:CDS |
TGGCAAGTGACAGATCCCCT+CGG | 0.678473 | 8.1:-43165236 | None:intergenic |
AGGCAACTTTCACACTATGG+CGG | 0.690913 | 8.1:+43164508 | MS.gene63111:CDS |
TGAGATCAAGTTCTTCAAGG+CGG | 0.695715 | 8.1:-43164040 | None:intergenic |
ACACCTGAAGATCTTTCCAG+AGG | 0.706614 | 8.1:-43163836 | None:intergenic |
AGATTAACAAATATACCGAG+GGG | 0.744560 | 8.1:+43165221 | MS.gene63111:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CTTTATATATAAATATAGTT+TGG | + | chr8.1:43164666-43164685 | MS.gene63111:intron | 10.0% |
!! | AATTAATTTAGAGAAGAATT+GGG | - | chr8.1:43164184-43164203 | None:intergenic | 15.0% |
!! | TAATTAATTTAGAGAAGAAT+TGG | - | chr8.1:43164185-43164204 | None:intergenic | 15.0% |
!! | TATTAAATTAAATTACCTGA+GGG | - | chr8.1:43164135-43164154 | None:intergenic | 15.0% |
!! | AATTCTGGATAATTTATATC+AGG | - | chr8.1:43164751-43164770 | None:intergenic | 20.0% |
!! | CTCTAAATTAATTACGAAAT+TGG | + | chr8.1:43164191-43164210 | MS.gene63111:intron | 20.0% |
!! | GTATTAAATTAAATTACCTG+AGG | - | chr8.1:43164136-43164155 | None:intergenic | 20.0% |
!!! | AGAATATTTGAGTTAAAACA+GGG | - | chr8.1:43164805-43164824 | None:intergenic | 20.0% |
!!! | ATTCATTATCATCATTTTGA+AGG | - | chr8.1:43164595-43164614 | None:intergenic | 20.0% |
!!! | TATTGATTATGAGAACTTTA+AGG | - | chr8.1:43164855-43164874 | None:intergenic | 20.0% |
!!! | TTGTTAATCTTTTGATAGAA+CGG | - | chr8.1:43165211-43165230 | None:intergenic | 20.0% |
! | AAAGATTAACAAATATACCG+AGG | + | chr8.1:43165219-43165238 | MS.gene63111:CDS | 25.0% |
! | AACAAATTCACTTTGACAAT+AGG | - | chr8.1:43164555-43164574 | None:intergenic | 25.0% |
! | AAGATTAACAAATATACCGA+GGG | + | chr8.1:43165220-43165239 | MS.gene63111:CDS | 25.0% |
! | AGTTTATTTGAATCCATCTT+TGG | + | chr8.1:43164901-43164920 | MS.gene63111:intron | 25.0% |
! | TCGAAAATATATGTGGTTTA+CGG | - | chr8.1:43164956-43164975 | None:intergenic | 25.0% |
!! | CAGAATATTTGAGTTAAAAC+AGG | - | chr8.1:43164806-43164825 | None:intergenic | 25.0% |
!!! | CTGTTTTAACTCAAATATTC+TGG | + | chr8.1:43164804-43164823 | MS.gene63111:CDS | 25.0% |
!!! | TATTTTTGTTGACATTTCAC+TGG | + | chr8.1:43165169-43165188 | MS.gene63111:CDS | 25.0% |
AAGTCGAATGTATTGAAATG+TGG | + | chr8.1:43163997-43164016 | MS.gene63111:CDS | 30.0% | |
ACACCAATGATAATTTCACT+TGG | + | chr8.1:43164447-43164466 | MS.gene63111:CDS | 30.0% | |
AGATGACTCGAAAATATATG+TGG | - | chr8.1:43164963-43164982 | None:intergenic | 30.0% | |
AGATTAACAAATATACCGAG+GGG | + | chr8.1:43165221-43165240 | MS.gene63111:CDS | 30.0% | |
AGTCCAAGTGAAATTATCAT+TGG | - | chr8.1:43164453-43164472 | None:intergenic | 30.0% | |
AGTCGAATGTATTGAAATGT+GGG | + | chr8.1:43163998-43164017 | MS.gene63111:CDS | 30.0% | |
ATCTGGTGGTAAATACAATA+TGG | + | chr8.1:43164244-43164263 | MS.gene63111:CDS | 30.0% | |
ATTTGCATAGAAGGATATCA+AGG | + | chr8.1:43165080-43165099 | MS.gene63111:CDS | 30.0% | |
CTGAAGTATATTTGCATAGA+AGG | + | chr8.1:43165071-43165090 | MS.gene63111:CDS | 30.0% | |
CTTCTATGCAAATATACTTC+AGG | - | chr8.1:43165073-43165092 | None:intergenic | 30.0% | |
TATGCAAATATACTTCAGGT+GGG | - | chr8.1:43165069-43165088 | None:intergenic | 30.0% | |
TCCGTTACGCAAAATAAATT+CGG | - | chr8.1:43165129-43165148 | None:intergenic | 30.0% | |
TGAAATGGAACTTATGAATG+TGG | - | chr8.1:43163944-43163963 | None:intergenic | 30.0% | |
TTTGAAGGTCATTGAGAATA+GGG | - | chr8.1:43164580-43164599 | None:intergenic | 30.0% | |
! | AATTTCACTTGGACTTTTCT+TGG | + | chr8.1:43164458-43164477 | MS.gene63111:CDS | 30.0% |
! | AGCTTTTCGTTTTCTTTTAG+AGG | - | chr8.1:43163676-43163695 | None:intergenic | 30.0% |
!! | TTTCTTTTAGAGGCTAACTT+GGG | - | chr8.1:43163666-43163685 | None:intergenic | 30.0% |
!! | TTTTCTTTTAGAGGCTAACT+TGG | - | chr8.1:43163667-43163686 | None:intergenic | 30.0% |
!! | TTTTGAAGGTCATTGAGAAT+AGG | - | chr8.1:43164581-43164600 | None:intergenic | 30.0% |
AAATTGGTGAACTCATGTGT+TGG | + | chr8.1:43164207-43164226 | MS.gene63111:intron | 35.0% | |
AACCATCATCTTTACGAACA+TGG | + | chr8.1:43165006-43165025 | MS.gene63111:CDS | 35.0% | |
AACTTAACTTTGACCCAGTT+GGG | + | chr8.1:43165258-43165277 | MS.gene63111:CDS | 35.0% | |
AAGAAAACGAAAAGCTTGCA+CGG | + | chr8.1:43163680-43163699 | MS.gene63111:CDS | 35.0% | |
ACCATCATCTTTACGAACAT+GGG | + | chr8.1:43165007-43165026 | MS.gene63111:CDS | 35.0% | |
ATACATAGACAGACCAAAGA+TGG | - | chr8.1:43164917-43164936 | None:intergenic | 35.0% | |
ATATGACACAAAACTGAGTC+CGG | - | chr8.1:43163750-43163769 | None:intergenic | 35.0% | |
CATCAAGTTCATAGGTGAAA+TGG | - | chr8.1:43163959-43163978 | None:intergenic | 35.0% | |
CTATGCAAATATACTTCAGG+TGG | - | chr8.1:43165070-43165089 | None:intergenic | 35.0% | |
CTCTGTATATGGAAACAGTT+TGG | + | chr8.1:43164388-43164407 | MS.gene63111:CDS | 35.0% | |
GTCATGTTCATCAAGTTCAT+AGG | - | chr8.1:43163967-43163986 | None:intergenic | 35.0% | |
TATACAATGATGGCAAGTGA+TGG | - | chr8.1:43164706-43164725 | None:intergenic | 35.0% | |
TCTCATAATCAATAGCCACA+AGG | + | chr8.1:43164861-43164880 | MS.gene63111:CDS | 35.0% | |
TTGGAGGTTTACTCTGTATA+TGG | + | chr8.1:43164377-43164396 | MS.gene63111:CDS | 35.0% | |
TTTATATCAGGAACCTGAAG+TGG | - | chr8.1:43164739-43164758 | None:intergenic | 35.0% | |
! | TGTTCTAAATCGCGAAATTC+TGG | - | chr8.1:43164766-43164785 | None:intergenic | 35.0% |
!!! | GCCGAATTTATTTTGCGTAA+CGG | + | chr8.1:43165125-43165144 | MS.gene63111:CDS | 35.0% |
AAACTTTGCAGTCTATCTGG+TGG | + | chr8.1:43164230-43164249 | MS.gene63111:intron | 40.0% | |
AGATACACCTTCTTCAGTGA+TGG | - | chr8.1:43164296-43164315 | None:intergenic | 40.0% | |
CAAACAGTTCATGGTCGTAA+CGG | - | chr8.1:43163799-43163818 | None:intergenic | 40.0% | |
CAACTGGGTCAAAGTTAAGT+TGG | - | chr8.1:43165259-43165278 | None:intergenic | 40.0% | |
CAACTTAACTTTGACCCAGT+TGG | + | chr8.1:43165257-43165276 | MS.gene63111:CDS | 40.0% | |
CCACTGCATGTATACAATGA+TGG | - | chr8.1:43164716-43164735 | None:intergenic | 40.0% | |
CCATCATTGTATACATGCAG+TGG | + | chr8.1:43164713-43164732 | MS.gene63111:intron | 40.0% | |
CCATGAACTGTTTGTCTTCT+AGG | + | chr8.1:43163805-43163824 | MS.gene63111:CDS | 40.0% | |
CCTAGAAGACAAACAGTTCA+TGG | - | chr8.1:43163808-43163827 | None:intergenic | 40.0% | |
GCAATTTCCATCACTGAAGA+AGG | + | chr8.1:43164286-43164305 | MS.gene63111:CDS | 40.0% | |
GGTGTATTTCAACAACCTCT+TGG | - | chr8.1:43164432-43164451 | None:intergenic | 40.0% | |
GTCACGTCATTCAACATCAA+AGG | + | chr8.1:43164625-43164644 | MS.gene63111:CDS | 40.0% | |
GTCATCTTGTTCCATGTTAC+TGG | + | chr8.1:43164976-43164995 | MS.gene63111:intron | 40.0% | |
TAAATTACCTGAGGGAAACG+AGG | - | chr8.1:43164127-43164146 | None:intergenic | 40.0% | |
TCATGAAGAAAGAAGGAGGA+AGG | - | chr8.1:43164094-43164113 | None:intergenic | 40.0% | |
TCCCATGTTCGTAAAGATGA+TGG | - | chr8.1:43165011-43165030 | None:intergenic | 40.0% | |
TCTTGTTCCATGTTACTGGT+AGG | + | chr8.1:43164980-43164999 | MS.gene63111:intron | 40.0% | |
TGAACTGTTTGTCTTCTAGG+TGG | + | chr8.1:43163808-43163827 | MS.gene63111:CDS | 40.0% | |
TGAGATCAAGTTCTTCAAGG+CGG | - | chr8.1:43164043-43164062 | None:intergenic | 40.0% | |
TGCTGAGATCAAGTTCTTCA+AGG | - | chr8.1:43164046-43164065 | None:intergenic | 40.0% | |
TGGAAACTTTGCAGTCTATC+TGG | + | chr8.1:43164227-43164246 | MS.gene63111:intron | 40.0% | |
TTGCAGCTCATGAAGAAAGA+AGG | - | chr8.1:43164101-43164120 | None:intergenic | 40.0% | |
! | AGAAGTGTGAACAAACCTTG+TGG | - | chr8.1:43164879-43164898 | None:intergenic | 40.0% |
! | CTAGGAACAGTTGTTGATTG+TGG | - | chr8.1:43165035-43165054 | None:intergenic | 40.0% |
! | GAAGGTGTATCTATGCACAA+TGG | + | chr8.1:43164304-43164323 | MS.gene63111:CDS | 40.0% |
!! | TCGTAACGGACGTTATTGTT+GGG | - | chr8.1:43163785-43163804 | None:intergenic | 40.0% |
!!! | TTTGCGTAACGGACTTGTTT+TGG | + | chr8.1:43165136-43165155 | MS.gene63111:CDS | 40.0% |
AAACTTTCTCCAGCTCCAAG+AGG | + | chr8.1:43164414-43164433 | MS.gene63111:CDS | 45.0% | |
AACCTCCAAATCTTCGAGCT+TGG | - | chr8.1:43164366-43164385 | None:intergenic | 45.0% | |
ACACCTGAAGATCTTTCCAG+AGG | - | chr8.1:43163839-43163858 | None:intergenic | 45.0% | |
ACCTCCAAATCTTCGAGCTT+GGG | - | chr8.1:43164365-43164384 | None:intergenic | 45.0% | |
ACTGCTCAATCTGTCCATCT+GGG | - | chr8.1:43163724-43163743 | None:intergenic | 45.0% | |
AGATCAAGTTCTTCAAGGCG+GGG | - | chr8.1:43164041-43164060 | None:intergenic | 45.0% | |
AGGCAACTTTCACACTATGG+CGG | + | chr8.1:43164508-43164527 | MS.gene63111:CDS | 45.0% | |
AGGTGGGATATGAGACATCT+AGG | - | chr8.1:43165053-43165072 | None:intergenic | 45.0% | |
CAGCTCATGAAGAAAGAAGG+AGG | - | chr8.1:43164098-43164117 | None:intergenic | 45.0% | |
GAGATCAAGTTCTTCAAGGC+GGG | - | chr8.1:43164042-43164061 | None:intergenic | 45.0% | |
GCGACTCAGATAGCTTCAAA+AGG | + | chr8.1:43163874-43163893 | MS.gene63111:CDS | 45.0% | |
TCGATAGTTGCCTTTCTCTC+TGG | + | chr8.1:43164335-43164354 | MS.gene63111:CDS | 45.0% | |
TGCAGGCAACTTTCACACTA+TGG | + | chr8.1:43164505-43164524 | MS.gene63111:CDS | 45.0% | |
TGTTCCATGTTACTGGTAGG+AGG | + | chr8.1:43164983-43165002 | MS.gene63111:intron | 45.0% | |
TTTCAACAACCTCTTGGAGC+TGG | - | chr8.1:43164426-43164445 | None:intergenic | 45.0% | |
! | ACTTGGACTTTTCTTGGTCC+TGG | + | chr8.1:43164464-43164483 | MS.gene63111:CDS | 45.0% |
! | TAACGGACGTTATTGTTGGG+AGG | - | chr8.1:43163782-43163801 | None:intergenic | 45.0% |
!! | GTCGTAACGGACGTTATTGT+TGG | - | chr8.1:43163786-43163805 | None:intergenic | 45.0% |
ATACATGCAGTGGCCACTTC+AGG | + | chr8.1:43164723-43164742 | MS.gene63111:intron | 50.0% | |
CCTCCAAATCTTCGAGCTTG+GGG | - | chr8.1:43164364-43164383 | None:intergenic | 50.0% | |
CCTGAAGATCTTTCCAGAGG+TGG | - | chr8.1:43163836-43163855 | None:intergenic | 50.0% | |
CTGAGTCGCAATCGTTGAAG+CGG | - | chr8.1:43163863-43163882 | None:intergenic | 50.0% | |
GACTGCTCAATCTGTCCATC+TGG | - | chr8.1:43163725-43163744 | None:intergenic | 50.0% | |
GATCAAGTTCTTCAAGGCGG+GGG | - | chr8.1:43164040-43164059 | None:intergenic | 50.0% | |
GGACAGATTGAGCAGTCTAC+CGG | + | chr8.1:43163728-43163747 | MS.gene63111:CDS | 50.0% | |
GGACGTTATTGTTGGGAGGA+AGG | - | chr8.1:43163778-43163797 | None:intergenic | 50.0% | |
GGTTCCTCCTACCAGTAACA+TGG | - | chr8.1:43164990-43165009 | None:intergenic | 50.0% | |
TATGAATGTGGCGCGATCTG+CGG | - | chr8.1:43163932-43163951 | None:intergenic | 50.0% | |
! | CCACCTCTGGAAAGATCTTC+AGG | + | chr8.1:43163833-43163852 | MS.gene63111:CDS | 50.0% |
! | TGGACTTTTCTTGGTCCTGG+TGG | + | chr8.1:43164467-43164486 | MS.gene63111:CDS | 50.0% |
ATGCCCAATCTGTAGCCACC+AGG | - | chr8.1:43164485-43164504 | None:intergenic | 55.0% | |
CCCCAAGCTCGAAGATTTGG+AGG | + | chr8.1:43164361-43164380 | MS.gene63111:CDS | 55.0% | |
CTGCCCCAAGCTCGAAGATT+TGG | + | chr8.1:43164358-43164377 | MS.gene63111:CDS | 55.0% | |
GCAACAACCTCGTTTCCCTC+AGG | + | chr8.1:43164117-43164136 | MS.gene63111:CDS | 55.0% | |
GGTCCTGGTGGCTACAGATT+GGG | + | chr8.1:43164479-43164498 | MS.gene63111:CDS | 55.0% | |
TGGCAAGTGACAGATCCCCT+CGG | - | chr8.1:43165239-43165258 | None:intergenic | 55.0% | |
TGGTCCTGGTGGCTACAGAT+TGG | + | chr8.1:43164478-43164497 | MS.gene63111:CDS | 55.0% | |
! | GGCTACAGATTGGGCATTGC+AGG | + | chr8.1:43164488-43164507 | MS.gene63111:CDS | 55.0% |
AATGTGGCGCGATCTGCGGA+GGG | - | chr8.1:43163928-43163947 | None:intergenic | 60.0% | |
ATGTGGGTCCGTGCTGCCAT+TGG | + | chr8.1:43164014-43164033 | MS.gene63111:CDS | 60.0% | |
CTTGGGGCAGCCAGAGAGAA+AGG | - | chr8.1:43164348-43164367 | None:intergenic | 60.0% | |
TTCTTCAAGGCGGGGGCCAA+TGG | - | chr8.1:43164033-43164052 | None:intergenic | 60.0% | |
!! | GACAAGTGGAGGCACCCAGA+TGG | + | chr8.1:43163707-43163726 | MS.gene63111:CDS | 60.0% |
CTTCTAGGTGGCGCCACCTC+TGG | + | chr8.1:43163820-43163839 | MS.gene63111:CDS | 65.0% | |
GAATGTGGCGCGATCTGCGG+AGG | - | chr8.1:43163929-43163948 | None:intergenic | 65.0% | |
GCTTGCACGGCGACGACAAG+TGG | + | chr8.1:43163693-43163712 | MS.gene63111:CDS | 65.0% | |
TGCACGGCGACGACAAGTGG+AGG | + | chr8.1:43163696-43163715 | MS.gene63111:CDS | 65.0% | |
GGCGGGGGCCAATGGCAGCA+CGG | - | chr8.1:43164025-43164044 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 43163657 | 43165289 | 43163657 | ID=MS.gene63111 |
chr8.1 | mRNA | 43163657 | 43165289 | 43163657 | ID=MS.gene63111.t1;Parent=MS.gene63111 |
chr8.1 | exon | 43163657 | 43164138 | 43163657 | ID=MS.gene63111.t1.exon1;Parent=MS.gene63111.t1 |
chr8.1 | CDS | 43163657 | 43164138 | 43163657 | ID=cds.MS.gene63111.t1;Parent=MS.gene63111.t1 |
chr8.1 | exon | 43164241 | 43164646 | 43164241 | ID=MS.gene63111.t1.exon2;Parent=MS.gene63111.t1 |
chr8.1 | CDS | 43164241 | 43164646 | 43164241 | ID=cds.MS.gene63111.t1;Parent=MS.gene63111.t1 |
chr8.1 | exon | 43164733 | 43164882 | 43164733 | ID=MS.gene63111.t1.exon3;Parent=MS.gene63111.t1 |
chr8.1 | CDS | 43164733 | 43164882 | 43164733 | ID=cds.MS.gene63111.t1;Parent=MS.gene63111.t1 |
chr8.1 | exon | 43165002 | 43165289 | 43165002 | ID=MS.gene63111.t1.exon4;Parent=MS.gene63111.t1 |
chr8.1 | CDS | 43165002 | 43165289 | 43165002 | ID=cds.MS.gene63111.t1;Parent=MS.gene63111.t1 |
Gene Sequence |
Protein sequence |