Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34216.t1 | XP_013445395.1 | 96.7 | 458 | 15 | 0 | 4 | 461 | 3 | 460 | 1.20E-262 | 915.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34216.t1 | Q9FM89 | 29.2 | 463 | 263 | 16 | 14 | 457 | 6 | 422 | 1.1e-27 | 125.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34216.t1 | A0A072TQF7 | 96.7 | 458 | 15 | 0 | 4 | 461 | 3 | 460 | 8.6e-263 | 915.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34216.t1 | MTR_8g058965 | 96.725 | 458 | 15 | 0 | 4 | 461 | 3 | 460 | 0.0 | 907 |
MS.gene34216.t1 | MTR_8g469020 | 66.667 | 450 | 147 | 2 | 14 | 461 | 7 | 455 | 0.0 | 590 |
MS.gene34216.t1 | MTR_4g050250 | 66.180 | 411 | 129 | 4 | 3 | 403 | 10 | 420 | 0.0 | 531 |
MS.gene34216.t1 | MTR_8g070950 | 57.113 | 471 | 159 | 12 | 1 | 461 | 1 | 438 | 6.86e-163 | 467 |
MS.gene34216.t1 | MTR_8g062010 | 55.652 | 460 | 160 | 10 | 14 | 462 | 9 | 435 | 3.45e-162 | 465 |
MS.gene34216.t1 | MTR_8g062310 | 53.020 | 447 | 168 | 9 | 13 | 458 | 24 | 429 | 3.04e-146 | 424 |
MS.gene34216.t1 | MTR_8g062080 | 52.941 | 459 | 173 | 11 | 14 | 461 | 23 | 449 | 3.35e-145 | 422 |
MS.gene34216.t1 | MTR_8g062300 | 48.509 | 503 | 182 | 13 | 2 | 461 | 13 | 481 | 5.34e-134 | 395 |
MS.gene34216.t1 | MTR_8g467790 | 48.157 | 407 | 129 | 12 | 13 | 399 | 147 | 491 | 9.68e-106 | 323 |
MS.gene34216.t1 | MTR_2g083840 | 43.966 | 464 | 232 | 10 | 3 | 457 | 13 | 457 | 1.51e-100 | 308 |
MS.gene34216.t1 | MTR_8g468810 | 42.316 | 475 | 233 | 15 | 2 | 457 | 11 | 463 | 1.65e-99 | 306 |
MS.gene34216.t1 | MTR_8g062270 | 43.384 | 461 | 226 | 11 | 11 | 456 | 13 | 453 | 6.21e-99 | 304 |
MS.gene34216.t1 | MTR_4g032730 | 38.843 | 484 | 244 | 11 | 5 | 456 | 3 | 466 | 1.33e-93 | 291 |
MS.gene34216.t1 | MTR_8g058970 | 40.619 | 485 | 237 | 15 | 6 | 457 | 11 | 477 | 2.02e-92 | 288 |
MS.gene34216.t1 | MTR_8g467800 | 41.929 | 477 | 235 | 14 | 1 | 461 | 7 | 457 | 1.28e-89 | 280 |
MS.gene34216.t1 | MTR_5g092960 | 38.689 | 473 | 257 | 11 | 1 | 456 | 5 | 461 | 9.08e-84 | 265 |
MS.gene34216.t1 | MTR_8g468840 | 39.741 | 463 | 256 | 8 | 1 | 455 | 1 | 448 | 6.98e-82 | 260 |
MS.gene34216.t1 | MTR_8g014260 | 40.570 | 456 | 239 | 17 | 14 | 457 | 16 | 451 | 8.15e-78 | 249 |
MS.gene34216.t1 | MTR_8g468760 | 39.030 | 474 | 210 | 18 | 5 | 456 | 2 | 418 | 1.15e-77 | 248 |
MS.gene34216.t1 | MTR_8g445780 | 42.823 | 418 | 203 | 15 | 1 | 410 | 1 | 390 | 3.14e-75 | 241 |
MS.gene34216.t1 | MTR_8g468810 | 42.559 | 383 | 181 | 14 | 2 | 367 | 11 | 371 | 2.91e-74 | 238 |
MS.gene34216.t1 | MTR_8g468810 | 42.183 | 339 | 165 | 11 | 2 | 330 | 11 | 328 | 6.03e-66 | 215 |
MS.gene34216.t1 | MTR_8g468810 | 43.558 | 326 | 153 | 11 | 2 | 317 | 11 | 315 | 8.33e-66 | 214 |
MS.gene34216.t1 | MTR_8g468810 | 43.558 | 326 | 153 | 11 | 2 | 317 | 11 | 315 | 1.94e-65 | 214 |
MS.gene34216.t1 | MTR_8g014160 | 36.555 | 476 | 198 | 17 | 1 | 457 | 35 | 425 | 3.48e-64 | 213 |
MS.gene34216.t1 | MTR_2g086020 | 69.231 | 143 | 44 | 0 | 319 | 461 | 177 | 319 | 1.10e-58 | 196 |
MS.gene34216.t1 | MTR_2g086020 | 45.033 | 151 | 67 | 4 | 41 | 185 | 2 | 142 | 6.92e-27 | 110 |
MS.gene34216.t1 | MTR_5g092960 | 38.158 | 380 | 209 | 9 | 1 | 367 | 5 | 371 | 3.60e-58 | 197 |
MS.gene34216.t1 | MTR_8g467800 | 43.168 | 322 | 156 | 12 | 2 | 317 | 9 | 309 | 1.78e-53 | 183 |
MS.gene34216.t1 | MTR_4g024710 | 36.774 | 310 | 158 | 10 | 161 | 457 | 63 | 347 | 6.14e-43 | 155 |
MS.gene34216.t1 | MTR_8g014210 | 40.678 | 236 | 133 | 7 | 224 | 457 | 1 | 231 | 3.91e-38 | 139 |
MS.gene34216.t1 | MTR_8g077460 | 41.350 | 237 | 121 | 6 | 7 | 238 | 3 | 226 | 7.65e-36 | 136 |
MS.gene34216.t1 | MTR_8g077460 | 40.984 | 183 | 103 | 4 | 275 | 457 | 198 | 375 | 8.11e-29 | 117 |
MS.gene34216.t1 | MTR_1g041245 | 29.194 | 459 | 231 | 17 | 12 | 457 | 9 | 386 | 1.17e-33 | 130 |
MS.gene34216.t1 | MTR_5g021550 | 48.101 | 158 | 66 | 6 | 5 | 155 | 14 | 162 | 2.61e-32 | 121 |
MS.gene34216.t1 | MTR_4g024745 | 36.678 | 289 | 157 | 12 | 154 | 435 | 10 | 279 | 7.38e-32 | 123 |
MS.gene34216.t1 | MTR_7g056433 | 29.011 | 455 | 241 | 16 | 11 | 457 | 9 | 389 | 3.34e-31 | 124 |
MS.gene34216.t1 | MTR_5g084070 | 29.241 | 448 | 266 | 16 | 13 | 449 | 12 | 419 | 5.18e-29 | 119 |
MS.gene34216.t1 | MTR_3g099800 | 63.218 | 87 | 31 | 1 | 369 | 454 | 19 | 105 | 5.89e-29 | 110 |
MS.gene34216.t1 | MTR_8g014290 | 44.737 | 152 | 74 | 4 | 14 | 156 | 10 | 160 | 6.43e-29 | 111 |
MS.gene34216.t1 | MTR_5g080710 | 28.132 | 455 | 269 | 17 | 13 | 449 | 32 | 446 | 2.83e-27 | 114 |
MS.gene34216.t1 | MTR_7g026500 | 27.542 | 472 | 252 | 17 | 1 | 458 | 1 | 396 | 2.85e-27 | 113 |
MS.gene34216.t1 | MTR_7g033915 | 28.821 | 458 | 209 | 20 | 13 | 456 | 10 | 364 | 4.05e-26 | 109 |
MS.gene34216.t1 | MTR_3g071850 | 27.778 | 450 | 251 | 17 | 8 | 449 | 18 | 401 | 2.18e-23 | 103 |
MS.gene34216.t1 | MTR_5g008920 | 25.983 | 458 | 243 | 18 | 11 | 457 | 9 | 381 | 3.32e-22 | 98.6 |
MS.gene34216.t1 | MTR_1g066830 | 25.499 | 451 | 258 | 18 | 13 | 456 | 7 | 386 | 3.55e-22 | 98.2 |
MS.gene34216.t1 | MTR_7g056447 | 33.663 | 202 | 109 | 6 | 14 | 214 | 9 | 186 | 5.09e-22 | 96.3 |
MS.gene34216.t1 | MTR_5g073420 | 36.652 | 221 | 112 | 13 | 1 | 217 | 1 | 197 | 7.90e-22 | 97.4 |
MS.gene34216.t1 | MTR_0543s0010 | 28.319 | 452 | 227 | 20 | 14 | 456 | 86 | 449 | 1.08e-21 | 97.8 |
MS.gene34216.t1 | MTR_7g075820 | 25.641 | 468 | 239 | 20 | 14 | 454 | 6 | 391 | 1.19e-21 | 97.1 |
MS.gene34216.t1 | MTR_4g098590 | 29.551 | 423 | 215 | 19 | 16 | 424 | 1 | 354 | 1.44e-21 | 96.3 |
MS.gene34216.t1 | MTR_2g007500 | 32.883 | 222 | 109 | 9 | 1 | 217 | 1 | 187 | 1.03e-20 | 93.2 |
MS.gene34216.t1 | MTR_3g087260 | 28.484 | 488 | 261 | 18 | 14 | 456 | 12 | 456 | 1.48e-20 | 94.4 |
MS.gene34216.t1 | MTR_1g085120 | 26.477 | 457 | 256 | 16 | 8 | 457 | 88 | 471 | 1.66e-20 | 94.4 |
MS.gene34216.t1 | MTR_4g024720 | 40.571 | 175 | 76 | 8 | 2 | 155 | 9 | 176 | 1.70e-20 | 89.7 |
MS.gene34216.t1 | MTR_7g115270 | 35.294 | 221 | 116 | 9 | 6 | 219 | 4 | 204 | 1.91e-20 | 93.6 |
MS.gene34216.t1 | MTR_1g085120 | 26.258 | 457 | 257 | 16 | 8 | 457 | 163 | 546 | 2.37e-20 | 94.4 |
MS.gene34216.t1 | MTR_1g108820 | 27.232 | 448 | 257 | 16 | 9 | 454 | 3 | 383 | 3.11e-20 | 92.8 |
MS.gene34216.t1 | MTR_5g007410 | 26.872 | 454 | 257 | 15 | 16 | 462 | 28 | 413 | 3.20e-20 | 93.2 |
MS.gene34216.t1 | MTR_7g032380 | 35.185 | 216 | 113 | 10 | 5 | 217 | 2 | 193 | 3.68e-20 | 92.0 |
MS.gene34216.t1 | MTR_2g008320 | 26.180 | 466 | 248 | 16 | 6 | 457 | 44 | 427 | 9.93e-20 | 91.7 |
MS.gene34216.t1 | MTR_1089s0010 | 24.558 | 452 | 255 | 18 | 13 | 457 | 7 | 379 | 2.52e-19 | 89.7 |
MS.gene34216.t1 | MTR_3g108150 | 32.710 | 214 | 112 | 9 | 14 | 222 | 13 | 199 | 7.58e-19 | 88.6 |
MS.gene34216.t1 | MTR_5g058100 | 31.193 | 218 | 125 | 7 | 7 | 222 | 2 | 196 | 9.39e-19 | 88.2 |
MS.gene34216.t1 | MTR_5g061680 | 33.333 | 228 | 118 | 10 | 1 | 222 | 1 | 200 | 9.79e-19 | 87.4 |
MS.gene34216.t1 | MTR_3g108560 | 24.945 | 453 | 246 | 14 | 14 | 456 | 20 | 388 | 1.31e-18 | 87.8 |
MS.gene34216.t1 | MTR_2g036470 | 26.237 | 465 | 259 | 19 | 5 | 456 | 2 | 395 | 2.87e-18 | 87.0 |
MS.gene34216.t1 | MTR_8g085430 | 34.123 | 211 | 113 | 8 | 13 | 217 | 10 | 200 | 4.62e-18 | 85.5 |
MS.gene34216.t1 | MTR_4g056040 | 27.349 | 479 | 257 | 20 | 1 | 425 | 1 | 442 | 5.55e-18 | 86.7 |
MS.gene34216.t1 | MTR_5g045510 | 25.240 | 416 | 222 | 16 | 12 | 424 | 10 | 339 | 8.40e-18 | 85.1 |
MS.gene34216.t1 | MTR_4g056030 | 28.281 | 442 | 257 | 19 | 14 | 429 | 9 | 416 | 5.28e-17 | 83.6 |
MS.gene34216.t1 | MTR_1g038710 | 26.977 | 430 | 276 | 15 | 14 | 425 | 19 | 428 | 6.34e-17 | 83.2 |
MS.gene34216.t1 | MTR_6g011460 | 26.096 | 456 | 249 | 15 | 12 | 457 | 44 | 421 | 7.60e-17 | 82.8 |
MS.gene34216.t1 | MTR_3g107120 | 34.247 | 219 | 106 | 10 | 14 | 217 | 9 | 204 | 9.51e-17 | 82.4 |
MS.gene34216.t1 | MTR_3g107100 | 32.569 | 218 | 113 | 9 | 7 | 218 | 6 | 195 | 1.24e-16 | 82.0 |
MS.gene34216.t1 | MTR_3g107160 | 31.336 | 217 | 116 | 9 | 11 | 219 | 7 | 198 | 1.34e-16 | 81.6 |
MS.gene34216.t1 | MTR_7g034110 | 36.058 | 208 | 108 | 9 | 13 | 217 | 10 | 195 | 1.38e-16 | 81.3 |
MS.gene34216.t1 | MTR_2g007450 | 32.877 | 219 | 114 | 9 | 13 | 215 | 15 | 216 | 1.40e-16 | 82.0 |
MS.gene34216.t1 | MTR_7g098480 | 34.434 | 212 | 103 | 8 | 13 | 217 | 17 | 199 | 2.21e-16 | 81.6 |
MS.gene34216.t1 | MTR_7g033940 | 38.235 | 136 | 68 | 5 | 11 | 142 | 91 | 214 | 2.54e-16 | 78.2 |
MS.gene34216.t1 | MTR_7g033945 | 37.288 | 177 | 89 | 8 | 13 | 181 | 10 | 172 | 2.79e-16 | 77.0 |
MS.gene34216.t1 | MTR_5g008950 | 30.137 | 219 | 121 | 7 | 16 | 231 | 1 | 190 | 3.41e-16 | 80.5 |
MS.gene34216.t1 | MTR_7g098510 | 31.429 | 210 | 112 | 9 | 13 | 217 | 17 | 199 | 4.02e-16 | 80.5 |
MS.gene34216.t1 | MTR_4g055990 | 25.263 | 475 | 263 | 16 | 14 | 425 | 9 | 454 | 6.17e-16 | 80.5 |
MS.gene34216.t1 | MTR_3g036250 | 33.333 | 210 | 109 | 10 | 14 | 217 | 5 | 189 | 6.27e-16 | 79.3 |
MS.gene34216.t1 | MTR_4g055990 | 25.263 | 475 | 263 | 16 | 14 | 425 | 9 | 454 | 7.02e-16 | 80.1 |
MS.gene34216.t1 | MTR_3g023630 | 32.394 | 213 | 116 | 11 | 5 | 215 | 2 | 188 | 7.85e-16 | 79.3 |
MS.gene34216.t1 | MTR_7g055943 | 24.835 | 455 | 260 | 17 | 13 | 457 | 39 | 421 | 9.20e-16 | 79.7 |
MS.gene34216.t1 | MTR_7g007080 | 26.566 | 463 | 238 | 18 | 14 | 459 | 4 | 381 | 1.05e-15 | 79.0 |
MS.gene34216.t1 | MTR_4g080787 | 25.996 | 477 | 299 | 18 | 11 | 459 | 16 | 466 | 1.08e-15 | 79.7 |
MS.gene34216.t1 | MTR_7g034115 | 34.783 | 207 | 108 | 10 | 12 | 215 | 9 | 191 | 1.03e-14 | 75.9 |
MS.gene34216.t1 | MTR_7g056420 | 30.542 | 203 | 90 | 8 | 14 | 215 | 9 | 161 | 1.04e-14 | 77.4 |
MS.gene34216.t1 | MTR_3g040700 | 30.660 | 212 | 112 | 8 | 14 | 217 | 43 | 227 | 1.09e-14 | 76.3 |
MS.gene34216.t1 | MTR_7g056430 | 30.542 | 203 | 90 | 8 | 14 | 215 | 9 | 161 | 1.09e-14 | 77.4 |
MS.gene34216.t1 | MTR_7g098570 | 33.186 | 226 | 110 | 11 | 13 | 227 | 19 | 214 | 1.54e-14 | 75.9 |
MS.gene34216.t1 | MTR_5g045170 | 31.390 | 223 | 125 | 10 | 1 | 219 | 1 | 199 | 1.69e-14 | 75.5 |
MS.gene34216.t1 | MTR_3g467400 | 30.594 | 219 | 122 | 7 | 14 | 220 | 3 | 203 | 2.30e-14 | 74.7 |
MS.gene34216.t1 | MTR_6g022500 | 32.407 | 216 | 120 | 9 | 2 | 215 | 91 | 282 | 2.45e-14 | 75.5 |
MS.gene34216.t1 | MTR_1g053025 | 24.783 | 460 | 254 | 19 | 13 | 454 | 1 | 386 | 4.08e-14 | 74.3 |
MS.gene34216.t1 | MTR_3g105060 | 28.155 | 206 | 126 | 5 | 12 | 217 | 12 | 195 | 5.10e-14 | 73.9 |
MS.gene34216.t1 | MTR_7g084080 | 36.943 | 157 | 79 | 7 | 4 | 157 | 7 | 146 | 6.33e-14 | 72.8 |
MS.gene34216.t1 | MTR_6g045333 | 31.455 | 213 | 123 | 9 | 10 | 219 | 57 | 249 | 7.07e-14 | 73.9 |
MS.gene34216.t1 | MTR_7g033990 | 32.547 | 212 | 111 | 9 | 12 | 216 | 9 | 195 | 7.28e-14 | 73.6 |
MS.gene34216.t1 | MTR_4g093690 | 30.690 | 290 | 148 | 14 | 14 | 294 | 18 | 263 | 8.26e-14 | 72.0 |
MS.gene34216.t1 | MTR_8g014230 | 41.667 | 84 | 47 | 2 | 367 | 450 | 17 | 98 | 3.09e-13 | 66.2 |
MS.gene34216.t1 | MTR_2g008310 | 30.942 | 223 | 123 | 7 | 13 | 234 | 1 | 193 | 3.12e-13 | 71.6 |
MS.gene34216.t1 | MTR_7g007340 | 28.899 | 218 | 110 | 7 | 7 | 223 | 6 | 179 | 3.19e-13 | 71.2 |
MS.gene34216.t1 | MTR_1g108820 | 31.884 | 207 | 116 | 8 | 9 | 215 | 3 | 184 | 3.25e-13 | 71.2 |
MS.gene34216.t1 | MTR_5g083890 | 29.858 | 211 | 125 | 6 | 14 | 213 | 6 | 204 | 3.68e-13 | 71.6 |
MS.gene34216.t1 | MTR_7g114710 | 28.986 | 207 | 124 | 8 | 12 | 217 | 11 | 195 | 4.29e-13 | 70.9 |
MS.gene34216.t1 | MTR_0492s0020 | 33.659 | 205 | 105 | 11 | 14 | 217 | 86 | 260 | 4.89e-13 | 71.2 |
MS.gene34216.t1 | MTR_3g109982 | 35.545 | 211 | 97 | 12 | 14 | 217 | 13 | 191 | 7.08e-13 | 71.2 |
MS.gene34216.t1 | MTR_2g005990 | 31.132 | 212 | 123 | 6 | 12 | 215 | 4 | 200 | 7.81e-13 | 70.5 |
MS.gene34216.t1 | MTR_3g110010 | 35.545 | 211 | 97 | 12 | 14 | 217 | 13 | 191 | 1.22e-12 | 70.5 |
MS.gene34216.t1 | MTR_7g032370 | 32.990 | 194 | 104 | 9 | 26 | 217 | 2 | 171 | 1.59e-12 | 68.9 |
MS.gene34216.t1 | MTR_2g007400 | 29.864 | 221 | 129 | 7 | 5 | 215 | 3 | 207 | 1.79e-12 | 69.3 |
MS.gene34216.t1 | MTR_4g024770 | 60.870 | 46 | 17 | 1 | 14 | 59 | 24 | 68 | 2.08e-12 | 62.8 |
MS.gene34216.t1 | MTR_6g018660 | 29.843 | 191 | 117 | 7 | 2 | 182 | 8 | 191 | 2.67e-12 | 68.6 |
MS.gene34216.t1 | MTR_5g087940 | 33.645 | 214 | 117 | 11 | 4 | 215 | 20 | 210 | 2.75e-12 | 68.6 |
MS.gene34216.t1 | MTR_3g108560 | 28.641 | 206 | 114 | 7 | 14 | 217 | 20 | 194 | 4.43e-12 | 67.4 |
MS.gene34216.t1 | MTR_3g082890 | 36.735 | 147 | 80 | 6 | 14 | 160 | 97 | 230 | 5.01e-12 | 68.2 |
MS.gene34216.t1 | MTR_7g088260 | 29.358 | 218 | 128 | 8 | 1 | 217 | 78 | 270 | 7.47e-12 | 67.4 |
MS.gene34216.t1 | MTR_3g082890 | 39.831 | 118 | 60 | 5 | 14 | 131 | 17 | 123 | 8.05e-12 | 67.4 |
MS.gene34216.t1 | MTR_1g095750 | 45.333 | 75 | 34 | 2 | 13 | 87 | 45 | 112 | 9.12e-12 | 63.2 |
MS.gene34216.t1 | MTR_3g095600 | 29.767 | 215 | 104 | 10 | 12 | 222 | 2 | 173 | 1.00e-11 | 65.9 |
MS.gene34216.t1 | MTR_3g026920 | 24.473 | 474 | 251 | 19 | 12 | 460 | 17 | 408 | 1.29e-11 | 66.6 |
MS.gene34216.t1 | MTR_1g085120 | 30.288 | 208 | 119 | 8 | 8 | 213 | 175 | 358 | 1.52e-11 | 66.6 |
MS.gene34216.t1 | MTR_5g058000 | 30.556 | 216 | 124 | 9 | 9 | 222 | 3 | 194 | 1.90e-11 | 65.9 |
MS.gene34216.t1 | MTR_5g031970 | 26.724 | 232 | 123 | 8 | 5 | 229 | 7 | 198 | 2.32e-11 | 65.5 |
MS.gene34216.t1 | MTR_1g107385 | 29.954 | 217 | 125 | 8 | 14 | 218 | 32 | 233 | 2.34e-11 | 65.9 |
MS.gene34216.t1 | MTR_3g048290 | 28.028 | 289 | 176 | 11 | 5 | 282 | 14 | 281 | 2.43e-11 | 65.9 |
MS.gene34216.t1 | MTR_8g014180 | 52.542 | 59 | 24 | 2 | 1 | 56 | 1 | 58 | 2.49e-11 | 59.3 |
MS.gene34216.t1 | MTR_6g088705 | 30.526 | 190 | 98 | 8 | 1 | 177 | 6 | 174 | 2.58e-11 | 63.9 |
MS.gene34216.t1 | MTR_3g099830 | 29.864 | 221 | 101 | 11 | 7 | 216 | 5 | 182 | 2.97e-11 | 65.5 |
MS.gene34216.t1 | MTR_6g040270 | 31.579 | 209 | 110 | 10 | 16 | 218 | 10 | 191 | 5.43e-11 | 64.7 |
MS.gene34216.t1 | MTR_4g113810 | 35.971 | 139 | 59 | 6 | 115 | 244 | 22 | 139 | 7.84e-11 | 61.2 |
MS.gene34216.t1 | MTR_5g039950 | 23.853 | 436 | 258 | 14 | 5 | 426 | 14 | 389 | 7.97e-11 | 64.3 |
MS.gene34216.t1 | MTR_0009s0080 | 29.612 | 206 | 122 | 5 | 16 | 219 | 20 | 204 | 8.89e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34216.t1 | AT5G56420 | 28.970 | 466 | 260 | 17 | 14 | 457 | 6 | 422 | 3.57e-29 | 119 |
MS.gene34216.t1 | AT5G56420 | 28.970 | 466 | 260 | 17 | 14 | 457 | 6 | 422 | 3.57e-29 | 119 |
MS.gene34216.t1 | AT5G56420 | 28.970 | 466 | 260 | 17 | 14 | 457 | 6 | 422 | 3.57e-29 | 119 |
MS.gene34216.t1 | AT5G53840 | 26.338 | 467 | 279 | 17 | 14 | 458 | 18 | 441 | 9.13e-24 | 103 |
MS.gene34216.t1 | AT4G26340 | 26.974 | 456 | 285 | 16 | 13 | 457 | 1 | 419 | 3.52e-23 | 101 |
MS.gene34216.t1 | AT4G10400 | 26.889 | 450 | 281 | 16 | 13 | 456 | 1 | 408 | 2.00e-21 | 96.7 |
MS.gene34216.t1 | AT4G10400 | 26.889 | 450 | 281 | 16 | 13 | 456 | 1 | 408 | 2.00e-21 | 96.7 |
MS.gene34216.t1 | AT4G10400 | 26.889 | 450 | 281 | 16 | 13 | 456 | 1 | 408 | 2.00e-21 | 96.7 |
MS.gene34216.t1 | AT4G13985 | 25.413 | 484 | 300 | 19 | 3 | 454 | 2 | 456 | 3.79e-21 | 96.3 |
MS.gene34216.t1 | AT1G69630 | 25.000 | 500 | 277 | 16 | 1 | 454 | 1 | 448 | 4.06e-21 | 95.9 |
MS.gene34216.t1 | AT2G26030 | 25.102 | 490 | 268 | 18 | 14 | 454 | 4 | 443 | 8.21e-21 | 95.1 |
MS.gene34216.t1 | AT2G26860 | 29.002 | 431 | 236 | 15 | 13 | 416 | 1 | 388 | 1.12e-20 | 94.4 |
MS.gene34216.t1 | AT2G26860 | 29.002 | 431 | 236 | 15 | 13 | 416 | 1 | 388 | 1.12e-20 | 94.4 |
MS.gene34216.t1 | AT5G44950 | 28.726 | 463 | 266 | 23 | 14 | 448 | 4 | 430 | 1.38e-20 | 94.4 |
MS.gene34216.t1 | AT1G16930 | 26.501 | 483 | 285 | 20 | 4 | 457 | 8 | 449 | 3.54e-20 | 93.2 |
MS.gene34216.t1 | AT1G16930 | 26.501 | 483 | 285 | 20 | 4 | 457 | 8 | 449 | 3.54e-20 | 93.2 |
MS.gene34216.t1 | AT1G16930 | 26.501 | 483 | 285 | 20 | 4 | 457 | 8 | 449 | 3.54e-20 | 93.2 |
MS.gene34216.t1 | AT2G26030 | 25.203 | 492 | 260 | 19 | 14 | 454 | 4 | 438 | 5.61e-20 | 92.4 |
MS.gene34216.t1 | AT2G26030 | 25.203 | 492 | 260 | 19 | 14 | 454 | 4 | 438 | 5.61e-20 | 92.4 |
MS.gene34216.t1 | AT1G32375 | 26.899 | 487 | 249 | 22 | 13 | 457 | 1 | 422 | 7.35e-20 | 92.0 |
MS.gene34216.t1 | AT1G32375 | 26.899 | 487 | 249 | 22 | 13 | 457 | 1 | 422 | 7.35e-20 | 92.0 |
MS.gene34216.t1 | AT1G78750 | 26.115 | 471 | 287 | 20 | 13 | 454 | 17 | 455 | 8.60e-20 | 92.0 |
MS.gene34216.t1 | AT1G78750 | 26.115 | 471 | 287 | 20 | 13 | 454 | 17 | 455 | 8.60e-20 | 92.0 |
MS.gene34216.t1 | AT5G56560 | 28.070 | 456 | 272 | 20 | 15 | 457 | 6 | 418 | 2.48e-19 | 90.5 |
MS.gene34216.t1 | AT5G60610 | 25.581 | 430 | 252 | 14 | 13 | 421 | 1 | 383 | 2.49e-19 | 90.1 |
MS.gene34216.t1 | AT5G60610 | 25.581 | 430 | 252 | 14 | 13 | 421 | 1 | 383 | 2.49e-19 | 90.1 |
MS.gene34216.t1 | AT5G56400 | 25.424 | 472 | 277 | 17 | 13 | 457 | 32 | 455 | 3.31e-19 | 90.1 |
MS.gene34216.t1 | AT1G06630 | 29.643 | 280 | 167 | 11 | 14 | 284 | 12 | 270 | 6.12e-19 | 87.8 |
MS.gene34216.t1 | AT3G42770 | 28.200 | 461 | 260 | 20 | 16 | 449 | 1 | 417 | 1.03e-18 | 89.4 |
MS.gene34216.t1 | AT3G26922 | 32.618 | 233 | 124 | 10 | 14 | 240 | 14 | 219 | 1.33e-18 | 86.7 |
MS.gene34216.t1 | AT3G26922 | 32.618 | 233 | 124 | 10 | 14 | 240 | 14 | 219 | 1.33e-18 | 86.7 |
MS.gene34216.t1 | AT1G06630 | 29.749 | 279 | 168 | 12 | 14 | 284 | 12 | 270 | 1.38e-18 | 87.8 |
MS.gene34216.t1 | AT1G06630 | 29.749 | 279 | 168 | 12 | 14 | 284 | 12 | 270 | 1.38e-18 | 87.8 |
MS.gene34216.t1 | AT1G06630 | 29.749 | 279 | 168 | 12 | 14 | 284 | 12 | 270 | 1.38e-18 | 87.8 |
MS.gene34216.t1 | AT1G06630 | 29.749 | 279 | 168 | 12 | 14 | 284 | 12 | 270 | 1.38e-18 | 87.8 |
MS.gene34216.t1 | AT1G06630 | 30.142 | 282 | 163 | 13 | 14 | 284 | 21 | 279 | 1.41e-18 | 88.2 |
MS.gene34216.t1 | AT1G06630 | 28.108 | 370 | 224 | 15 | 14 | 367 | 12 | 355 | 1.62e-18 | 87.0 |
MS.gene34216.t1 | AT1G06630 | 28.108 | 370 | 224 | 15 | 14 | 367 | 12 | 355 | 1.62e-18 | 87.0 |
MS.gene34216.t1 | AT4G00160 | 28.661 | 478 | 262 | 20 | 14 | 459 | 16 | 446 | 2.41e-18 | 87.8 |
MS.gene34216.t1 | AT1G06630 | 31.034 | 232 | 135 | 9 | 14 | 238 | 12 | 225 | 3.00e-18 | 87.4 |
MS.gene34216.t1 | AT3G60040 | 27.184 | 412 | 252 | 14 | 14 | 406 | 13 | 395 | 5.63e-18 | 87.0 |
MS.gene34216.t1 | AT3G59200 | 32.692 | 208 | 113 | 8 | 14 | 215 | 7 | 193 | 6.76e-18 | 85.5 |
MS.gene34216.t1 | AT3G60040 | 27.184 | 412 | 252 | 14 | 14 | 406 | 232 | 614 | 7.06e-18 | 87.0 |
MS.gene34216.t1 | AT3G60040 | 27.184 | 412 | 252 | 14 | 14 | 406 | 233 | 615 | 7.32e-18 | 87.0 |
MS.gene34216.t1 | AT3G60040 | 27.184 | 412 | 252 | 14 | 14 | 406 | 232 | 614 | 7.40e-18 | 87.0 |
MS.gene34216.t1 | AT3G60040 | 27.184 | 412 | 252 | 14 | 14 | 406 | 230 | 612 | 7.86e-18 | 86.7 |
MS.gene34216.t1 | AT5G53635 | 26.022 | 465 | 279 | 16 | 16 | 456 | 2 | 425 | 1.27e-17 | 85.1 |
MS.gene34216.t1 | AT4G26350 | 25.820 | 488 | 259 | 20 | 13 | 457 | 1 | 428 | 1.27e-17 | 85.1 |
MS.gene34216.t1 | AT5G22720 | 24.380 | 484 | 291 | 16 | 14 | 460 | 23 | 468 | 1.29e-17 | 85.5 |
MS.gene34216.t1 | AT1G66310 | 25.647 | 464 | 285 | 15 | 11 | 454 | 16 | 439 | 2.52e-17 | 84.3 |
MS.gene34216.t1 | AT3G59200 | 32.692 | 208 | 113 | 8 | 14 | 215 | 7 | 193 | 2.79e-17 | 84.7 |
MS.gene34216.t1 | AT5G22700 | 27.229 | 415 | 234 | 18 | 14 | 419 | 43 | 398 | 5.25e-17 | 83.6 |
MS.gene34216.t1 | AT4G13965 | 27.511 | 458 | 268 | 20 | 14 | 454 | 10 | 420 | 5.29e-17 | 83.2 |
MS.gene34216.t1 | AT5G22700 | 27.523 | 436 | 247 | 20 | 14 | 419 | 6 | 402 | 6.66e-17 | 83.2 |
MS.gene34216.t1 | AT5G22700 | 27.523 | 436 | 247 | 20 | 14 | 419 | 6 | 402 | 6.66e-17 | 83.2 |
MS.gene34216.t1 | AT5G22700 | 27.523 | 436 | 247 | 20 | 14 | 419 | 6 | 402 | 6.66e-17 | 83.2 |
MS.gene34216.t1 | AT5G22700 | 27.523 | 436 | 247 | 20 | 14 | 419 | 6 | 402 | 6.66e-17 | 83.2 |
MS.gene34216.t1 | AT1G13780 | 26.240 | 484 | 273 | 22 | 14 | 454 | 10 | 452 | 6.89e-17 | 83.2 |
MS.gene34216.t1 | AT4G09920 | 31.527 | 203 | 118 | 7 | 13 | 215 | 1 | 182 | 8.70e-17 | 81.3 |
MS.gene34216.t1 | AT4G09920 | 31.527 | 203 | 118 | 7 | 13 | 215 | 1 | 182 | 8.70e-17 | 81.3 |
MS.gene34216.t1 | AT4G09920 | 31.527 | 203 | 118 | 7 | 13 | 215 | 1 | 182 | 8.70e-17 | 81.3 |
MS.gene34216.t1 | AT5G22700 | 27.523 | 436 | 247 | 20 | 14 | 419 | 43 | 439 | 1.02e-16 | 82.8 |
MS.gene34216.t1 | AT4G09920 | 31.527 | 203 | 118 | 7 | 13 | 215 | 1 | 182 | 1.33e-16 | 80.9 |
MS.gene34216.t1 | AT4G09920 | 31.527 | 203 | 118 | 7 | 13 | 215 | 1 | 182 | 1.33e-16 | 80.9 |
MS.gene34216.t1 | AT5G18780 | 27.371 | 464 | 278 | 20 | 14 | 454 | 11 | 438 | 7.12e-16 | 80.1 |
MS.gene34216.t1 | AT5G18780 | 27.371 | 464 | 278 | 20 | 14 | 454 | 11 | 438 | 7.12e-16 | 80.1 |
MS.gene34216.t1 | AT4G14103 | 32.489 | 237 | 130 | 12 | 14 | 245 | 8 | 219 | 1.80e-15 | 79.0 |
MS.gene34216.t1 | AT4G14103 | 32.636 | 239 | 127 | 12 | 14 | 245 | 8 | 219 | 2.62e-15 | 77.8 |
MS.gene34216.t1 | AT4G14103 | 32.636 | 239 | 127 | 12 | 14 | 245 | 8 | 219 | 2.62e-15 | 77.8 |
MS.gene34216.t1 | AT5G41840 | 30.233 | 215 | 119 | 9 | 14 | 215 | 14 | 210 | 6.00e-15 | 77.4 |
MS.gene34216.t1 | AT5G50270 | 28.211 | 436 | 247 | 18 | 13 | 424 | 1 | 394 | 1.19e-14 | 75.9 |
MS.gene34216.t1 | AT3G58820 | 35.669 | 157 | 90 | 5 | 13 | 163 | 1 | 152 | 1.44e-14 | 75.9 |
MS.gene34216.t1 | AT5G56380 | 23.881 | 469 | 303 | 15 | 13 | 457 | 1 | 439 | 1.60e-14 | 75.9 |
MS.gene34216.t1 | AT5G56380 | 23.881 | 469 | 303 | 15 | 13 | 457 | 1 | 439 | 1.60e-14 | 75.9 |
MS.gene34216.t1 | AT3G52680 | 27.789 | 475 | 268 | 20 | 14 | 459 | 21 | 449 | 1.74e-14 | 75.9 |
MS.gene34216.t1 | AT3G59190 | 30.918 | 207 | 121 | 7 | 14 | 215 | 12 | 201 | 1.80e-14 | 75.5 |
MS.gene34216.t1 | AT3G59190 | 30.918 | 207 | 121 | 7 | 14 | 215 | 12 | 201 | 1.86e-14 | 75.9 |
MS.gene34216.t1 | AT4G14096 | 25.105 | 474 | 296 | 22 | 14 | 458 | 8 | 451 | 2.67e-14 | 75.1 |
MS.gene34216.t1 | AT4G14096 | 25.105 | 474 | 296 | 22 | 14 | 458 | 8 | 451 | 2.67e-14 | 75.1 |
MS.gene34216.t1 | AT3G03040 | 35.465 | 172 | 97 | 5 | 13 | 179 | 1 | 163 | 3.04e-14 | 75.1 |
MS.gene34216.t1 | AT2G04230 | 26.105 | 475 | 283 | 20 | 14 | 459 | 13 | 448 | 3.13e-14 | 75.1 |
MS.gene34216.t1 | AT5G56370 | 25.373 | 469 | 276 | 18 | 13 | 456 | 1 | 420 | 4.65e-14 | 74.3 |
MS.gene34216.t1 | AT5G56370 | 25.373 | 469 | 276 | 18 | 13 | 456 | 1 | 420 | 4.65e-14 | 74.3 |
MS.gene34216.t1 | AT5G44940 | 25.983 | 458 | 240 | 19 | 14 | 457 | 5 | 377 | 5.72e-14 | 73.6 |
MS.gene34216.t1 | AT5G56440 | 32.212 | 208 | 110 | 7 | 13 | 215 | 1 | 182 | 6.26e-14 | 73.9 |
MS.gene34216.t1 | AT5G56690 | 25.721 | 416 | 243 | 18 | 16 | 405 | 4 | 379 | 1.05e-13 | 73.2 |
MS.gene34216.t1 | AT3G59240 | 29.614 | 233 | 135 | 9 | 14 | 238 | 8 | 219 | 1.15e-13 | 73.6 |
MS.gene34216.t1 | AT3G59210 | 32.039 | 206 | 117 | 7 | 14 | 215 | 7 | 193 | 1.69e-13 | 72.8 |
MS.gene34216.t1 | AT3G59210 | 32.039 | 206 | 117 | 7 | 14 | 215 | 7 | 193 | 1.69e-13 | 72.8 |
MS.gene34216.t1 | AT3G59210 | 32.039 | 206 | 117 | 7 | 14 | 215 | 7 | 193 | 1.69e-13 | 72.8 |
MS.gene34216.t1 | AT3G59210 | 32.039 | 206 | 117 | 7 | 14 | 215 | 7 | 193 | 1.69e-13 | 72.8 |
MS.gene34216.t1 | AT3G59210 | 32.039 | 206 | 117 | 7 | 14 | 215 | 7 | 193 | 1.69e-13 | 72.8 |
MS.gene34216.t1 | AT3G58920 | 25.051 | 495 | 294 | 19 | 13 | 457 | 1 | 468 | 4.19e-13 | 71.6 |
MS.gene34216.t1 | AT2G29930 | 24.547 | 497 | 271 | 24 | 14 | 456 | 12 | 458 | 4.56e-13 | 71.2 |
MS.gene34216.t1 | AT2G29930 | 24.547 | 497 | 271 | 24 | 14 | 456 | 12 | 458 | 4.56e-13 | 71.2 |
MS.gene34216.t1 | AT3G59000 | 33.140 | 172 | 104 | 4 | 13 | 178 | 1 | 167 | 5.46e-13 | 71.2 |
MS.gene34216.t1 | AT3G44060 | 30.000 | 200 | 123 | 5 | 16 | 215 | 1 | 183 | 6.41e-13 | 70.9 |
MS.gene34216.t1 | AT3G59230 | 25.562 | 489 | 290 | 24 | 14 | 455 | 12 | 473 | 8.15e-13 | 70.9 |
MS.gene34216.t1 | AT4G00315 | 31.884 | 207 | 116 | 7 | 13 | 215 | 1 | 186 | 8.26e-13 | 70.5 |
MS.gene34216.t1 | AT5G22670 | 24.324 | 481 | 272 | 19 | 14 | 454 | 11 | 439 | 9.42e-13 | 70.5 |
MS.gene34216.t1 | AT1G55660 | 31.100 | 209 | 119 | 7 | 11 | 215 | 50 | 237 | 1.23e-12 | 70.1 |
MS.gene34216.t1 | AT3G03030 | 32.597 | 181 | 106 | 5 | 13 | 185 | 1 | 173 | 1.30e-12 | 69.3 |
MS.gene34216.t1 | AT2G42720 | 30.519 | 308 | 171 | 16 | 13 | 310 | 1 | 275 | 1.36e-12 | 69.7 |
MS.gene34216.t1 | AT1G05080 | 25.751 | 466 | 283 | 19 | 14 | 456 | 13 | 438 | 1.40e-12 | 69.7 |
MS.gene34216.t1 | AT1G66300 | 23.690 | 477 | 298 | 16 | 3 | 454 | 18 | 453 | 1.44e-12 | 69.7 |
MS.gene34216.t1 | AT1G55660 | 31.100 | 209 | 119 | 7 | 11 | 215 | 50 | 237 | 1.70e-12 | 68.9 |
MS.gene34216.t1 | AT3G58880 | 31.604 | 212 | 117 | 9 | 12 | 216 | 1 | 191 | 1.75e-12 | 69.7 |
MS.gene34216.t1 | AT3G03030 | 32.597 | 181 | 106 | 5 | 13 | 185 | 1 | 173 | 1.75e-12 | 69.7 |
MS.gene34216.t1 | AT3G59160 | 29.911 | 224 | 120 | 7 | 14 | 215 | 13 | 221 | 2.15e-12 | 69.3 |
MS.gene34216.t1 | AT3G26922 | 30.415 | 217 | 118 | 10 | 30 | 240 | 1 | 190 | 3.08e-12 | 67.4 |
MS.gene34216.t1 | AT3G26922 | 30.415 | 217 | 118 | 10 | 30 | 240 | 1 | 190 | 3.08e-12 | 67.4 |
MS.gene34216.t1 | AT5G44960 | 25.721 | 451 | 287 | 16 | 14 | 456 | 5 | 415 | 3.36e-12 | 68.6 |
MS.gene34216.t1 | AT3G58940 | 30.374 | 214 | 121 | 7 | 13 | 215 | 1 | 197 | 3.56e-12 | 68.9 |
MS.gene34216.t1 | AT3G58940 | 30.374 | 214 | 121 | 7 | 13 | 215 | 1 | 197 | 3.56e-12 | 68.9 |
MS.gene34216.t1 | AT3G49030 | 25.383 | 457 | 268 | 18 | 14 | 458 | 21 | 416 | 3.75e-12 | 68.6 |
MS.gene34216.t1 | AT5G38392 | 30.233 | 215 | 117 | 9 | 13 | 215 | 1 | 194 | 5.44e-12 | 65.5 |
MS.gene34216.t1 | AT5G18780 | 37.427 | 171 | 87 | 9 | 14 | 181 | 11 | 164 | 7.26e-12 | 67.4 |
MS.gene34216.t1 | AT5G18780 | 37.427 | 171 | 87 | 9 | 14 | 181 | 11 | 164 | 7.26e-12 | 67.4 |
MS.gene34216.t1 | AT4G00320 | 29.412 | 221 | 112 | 10 | 14 | 215 | 13 | 208 | 1.32e-11 | 67.0 |
MS.gene34216.t1 | AT5G41630 | 28.837 | 215 | 119 | 9 | 14 | 215 | 12 | 205 | 1.36e-11 | 66.6 |
MS.gene34216.t1 | AT3G14710 | 23.973 | 438 | 256 | 16 | 14 | 424 | 26 | 413 | 1.99e-11 | 66.2 |
MS.gene34216.t1 | AT5G38390 | 30.213 | 235 | 129 | 10 | 13 | 243 | 1 | 204 | 2.04e-11 | 66.2 |
MS.gene34216.t1 | AT4G15060 | 27.318 | 399 | 234 | 20 | 13 | 394 | 25 | 384 | 2.20e-11 | 65.9 |
MS.gene34216.t1 | AT5G56700 | 28.135 | 327 | 181 | 15 | 115 | 421 | 55 | 347 | 3.50e-11 | 65.1 |
MS.gene34216.t1 | AT3G26930 | 27.615 | 478 | 263 | 21 | 14 | 460 | 21 | 446 | 3.78e-11 | 65.5 |
MS.gene34216.t1 | AT3G44090 | 30.417 | 240 | 127 | 10 | 16 | 246 | 26 | 234 | 4.45e-11 | 65.1 |
MS.gene34216.t1 | AT5G41830 | 29.412 | 221 | 112 | 11 | 14 | 215 | 13 | 208 | 4.56e-11 | 65.5 |
MS.gene34216.t1 | AT5G56370 | 30.806 | 211 | 109 | 9 | 13 | 216 | 1 | 181 | 4.83e-11 | 64.3 |
MS.gene34216.t1 | AT3G59170 | 29.018 | 224 | 124 | 6 | 14 | 215 | 7 | 217 | 6.60e-11 | 64.7 |
MS.gene34216.t1 | AT3G59000 | 43.478 | 92 | 46 | 2 | 13 | 99 | 1 | 91 | 6.64e-11 | 63.9 |
MS.gene34216.t1 | AT1G22000 | 24.431 | 483 | 281 | 19 | 4 | 454 | 19 | 449 | 7.60e-11 | 64.3 |
Find 112 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCGCCGGTGGCGCCACCTT+TGG | 0.219688 | 8.4:+48066461 | MS.gene34216:CDS |
GGGAACTCTGGTCAAGAAAT+AGG | 0.266225 | 8.4:-48068034 | None:intergenic |
TGATGCAAATTGCAAAATTC+TGG | 0.267481 | 8.4:-48068446 | None:intergenic |
TAGAACAGTTCTTGTTTGTT+AGG | 0.285758 | 8.4:-48068879 | None:intergenic |
TTCGAATGTGGCGAGATTTA+CGG | 0.286490 | 8.4:-48066588 | None:intergenic |
TGAAAACATTGCAGTCTCTT+TGG | 0.294503 | 8.4:+48067826 | MS.gene34216:intron |
AGGTGGGATTCAAGACATTT+AGG | 0.296428 | 8.4:-48068736 | None:intergenic |
TCGCCGGTGGCGCCACCTTT+GGG | 0.306009 | 8.4:+48066462 | MS.gene34216:CDS |
AACATTGACATTGAGGATTT+CGG | 0.318146 | 8.4:+48067934 | MS.gene34216:CDS |
GGTCGTCATGACGGAGGTTT+TGG | 0.329588 | 8.4:-48066428 | None:intergenic |
GACTCAGCTGTGTCTCTATA+AGG | 0.330026 | 8.4:+48068955 | MS.gene34216:CDS |
GAAAGTCGAATTCAGCATAT+TGG | 0.336684 | 8.4:+48067906 | MS.gene34216:CDS |
TCAATACTTGTCTTTCTCTC+TGG | 0.353157 | 8.4:+48067973 | MS.gene34216:CDS |
AAACCCACATTTGGCATCAT+TGG | 0.367842 | 8.4:+48068165 | MS.gene34216:CDS |
TGCAACATCAAACCCACATT+TGG | 0.375079 | 8.4:+48068156 | MS.gene34216:CDS |
CTCTTGGCAGAAGGCGGAAC+GGG | 0.380996 | 8.4:-48068054 | None:intergenic |
ATCAATTAATTTCAACCTCT+TGG | 0.389220 | 8.4:-48068070 | None:intergenic |
AAACTGCCATGGTGATGATA+TGG | 0.399008 | 8.4:+48066726 | MS.gene34216:CDS |
ACTTTCAACATCTTTAATGA+TGG | 0.412204 | 8.4:-48067889 | None:intergenic |
TTTGGCTCCCATGTTCTTGA+AGG | 0.413263 | 8.4:-48068700 | None:intergenic |
CTGACCTATATTCATATAGA+AGG | 0.421134 | 8.4:+48068757 | MS.gene34216:CDS |
TTAGGAACTGTTGTTGACTT+TGG | 0.424286 | 8.4:-48068718 | None:intergenic |
ATATCCTTCTATATGAATAT+AGG | 0.426826 | 8.4:-48068761 | None:intergenic |
CTCAACTACCTCCGAGATCT+AGG | 0.429478 | 8.4:+48068261 | MS.gene34216:CDS |
GGAACTCTGGTCAAGAAATA+GGG | 0.443858 | 8.4:-48068033 | None:intergenic |
CAGAAGATTCGTGTTGAAGC+AGG | 0.446767 | 8.4:-48068486 | None:intergenic |
GAAATAGATTCTGATGGGCT+TGG | 0.454859 | 8.4:+48068117 | MS.gene34216:CDS |
CCACATGTAGACACATTCTC+CGG | 0.456229 | 8.4:-48066653 | None:intergenic |
GGGATTCCTGCAGTTGCAGT+TGG | 0.464051 | 8.4:-48066518 | None:intergenic |
GCTCCCAAAGGTGGCGCCAC+CGG | 0.466109 | 8.4:-48066465 | None:intergenic |
GCCCATCAGAATCTATTTCA+AGG | 0.471743 | 8.4:-48068113 | None:intergenic |
GGATTTCGGCAAACACCTTA+CGG | 0.472350 | 8.4:+48067948 | MS.gene34216:CDS |
CAGCTGAGTCAAATTTAAGT+TGG | 0.474643 | 8.4:-48068942 | None:intergenic |
ATGTGGCATAGGAGTGAGTC+TGG | 0.481345 | 8.4:-48066388 | None:intergenic |
CAAGAAATAGGGAGAAAAGT+AGG | 0.492659 | 8.4:-48068022 | None:intergenic |
ATCTTGAAGGTGGGGTCCAA+TGG | 0.495026 | 8.4:-48066686 | None:intergenic |
TTACCTGAGGGAAACGAGAT+TGG | 0.499649 | 8.4:-48066779 | None:intergenic |
CTTCTATATGAATATAGGTC+AGG | 0.501363 | 8.4:-48068756 | None:intergenic |
GGAACACAACATTGACATTG+AGG | 0.505951 | 8.4:+48067927 | MS.gene34216:CDS |
GCACCAATCTCGTTTCCCTC+AGG | 0.507292 | 8.4:+48066776 | MS.gene34216:CDS |
AACTGTCACCTTCAAGAACA+TGG | 0.510013 | 8.4:+48068692 | MS.gene34216:CDS |
AGAAGGCGGAACGGGAACTC+TGG | 0.511712 | 8.4:-48068046 | None:intergenic |
GTAAACATCGGAGGTGCAGC+AGG | 0.514352 | 8.4:-48066623 | None:intergenic |
GTATCTAGAGTTTCGAGTAC+GGG | 0.521737 | 8.4:-48068000 | None:intergenic |
AAATTCTGGATAATTTAGAA+TGG | 0.522156 | 8.4:-48068432 | None:intergenic |
TAATTGATGTGAAATTCTCA+TGG | 0.524028 | 8.4:+48068085 | MS.gene34216:CDS |
ATGTGGGTCCGTGCTGCCAT+TGG | 0.525161 | 8.4:+48066670 | MS.gene34216:CDS |
CTCGGAGGTAGTTGAGCATA+GGG | 0.525490 | 8.4:-48068254 | None:intergenic |
CCGGAGAATGTGTCTACATG+TGG | 0.528018 | 8.4:+48066653 | MS.gene34216:CDS |
GGTATCTAGAGTTTCGAGTA+CGG | 0.529317 | 8.4:-48068001 | None:intergenic |
GATAAATTCACTTTCACGCA+AGG | 0.530491 | 8.4:-48068229 | None:intergenic |
TCAAGAATTTGAAGATGAGC+TGG | 0.532840 | 8.4:+48068783 | MS.gene34216:CDS |
CATTGGCGACTTGCAGAGCA+TGG | 0.538592 | 8.4:+48068182 | MS.gene34216:CDS |
TGCCTTGAAATAGATTCTGA+TGG | 0.541668 | 8.4:+48068111 | MS.gene34216:CDS |
GTAAATCACCACCTAGATCT+CGG | 0.543700 | 8.4:-48068272 | None:intergenic |
AATTTCAACCTCTTGGCAGA+AGG | 0.550681 | 8.4:-48068063 | None:intergenic |
GAGAGACAAATCTTGAAGGT+GGG | 0.551283 | 8.4:-48066695 | None:intergenic |
GTCGCCAATGATGCCAAATG+TGG | 0.552977 | 8.4:-48068169 | None:intergenic |
ACGAGTCCAACTGCAACTGC+AGG | 0.555167 | 8.4:+48066512 | MS.gene34216:CDS |
TATTGAGAGACAAATCTTGA+AGG | 0.559357 | 8.4:-48066699 | None:intergenic |
GATGGGCTTGGTATAGAGTA+CGG | 0.560809 | 8.4:+48068129 | MS.gene34216:CDS |
TCTCGGAGGTAGTTGAGCAT+AGG | 0.566965 | 8.4:-48068255 | None:intergenic |
CTCAATATTACAAACTGCCA+TGG | 0.567570 | 8.4:+48066715 | MS.gene34216:CDS |
AATGAGACTGGTCGTCATGA+CGG | 0.569460 | 8.4:-48066437 | None:intergenic |
TTCTGGATAATTTAGAATGG+AGG | 0.569635 | 8.4:-48068429 | None:intergenic |
CCTCTTGGCAGAAGGCGGAA+CGG | 0.569763 | 8.4:-48068055 | None:intergenic |
GTGCAATTCAAGAGGGAAGG+AGG | 0.570678 | 8.4:-48066757 | None:intergenic |
GCCTTGAAATAGATTCTGAT+GGG | 0.576126 | 8.4:+48068112 | MS.gene34216:CDS |
AGAGACAAATCTTGAAGGTG+GGG | 0.579971 | 8.4:-48066694 | None:intergenic |
TAGGAAGGAATGATAGGATG+TGG | 0.580585 | 8.4:-48066405 | None:intergenic |
CCGTTCCGCCTTCTGCCAAG+AGG | 0.581777 | 8.4:+48068055 | MS.gene34216:CDS |
CGAGATTGGTGCAATTCAAG+AGG | 0.585120 | 8.4:-48066765 | None:intergenic |
TTCAACCTCTTGGCAGAAGG+CGG | 0.585298 | 8.4:-48068060 | None:intergenic |
AAGATTAACTGATATACCAA+GGG | 0.586408 | 8.4:+48068906 | MS.gene34216:CDS |
TGAGAGACAAATCTTGAAGG+TGG | 0.586669 | 8.4:-48066696 | None:intergenic |
CGTTTAGATGCTCCCAAAGG+TGG | 0.589564 | 8.4:-48066474 | None:intergenic |
AGACAAGTATTGAATCCGTA+AGG | 0.589853 | 8.4:-48067963 | None:intergenic |
CTATATGAATATAGGTCAGG+TGG | 0.596905 | 8.4:-48068753 | None:intergenic |
TCTCATAATTCAGAGTAGCA+AGG | 0.602330 | 8.4:+48068544 | MS.gene34216:CDS |
CACATGTAGACACATTCTCC+GGG | 0.602843 | 8.4:-48066652 | None:intergenic |
AAAGATTAACTGATATACCA+AGG | 0.603237 | 8.4:+48068905 | MS.gene34216:CDS |
GGAATGATAGGATGTGGCAT+AGG | 0.607252 | 8.4:-48066399 | None:intergenic |
TGCAATTCAAGAGGGAAGGA+GGG | 0.610260 | 8.4:-48066756 | None:intergenic |
TGGCATGTGACAGAGCCCCT+TGG | 0.611510 | 8.4:-48068922 | None:intergenic |
CCACCGGCGAGAAATGAGAC+TGG | 0.613340 | 8.4:-48066449 | None:intergenic |
TTGGTGCAATTCAAGAGGGA+AGG | 0.614725 | 8.4:-48066760 | None:intergenic |
AGAAGATTCGTGTTGAAGCA+GGG | 0.616763 | 8.4:-48068485 | None:intergenic |
GGTGGGGTCCAATGGCAGCA+CGG | 0.623491 | 8.4:-48066678 | None:intergenic |
CGGAGAATGTGTCTACATGT+GGG | 0.624898 | 8.4:+48066654 | MS.gene34216:CDS |
CCAGTCTCATTTCTCGCCGG+TGG | 0.626497 | 8.4:+48066449 | MS.gene34216:CDS |
TCTGCGTCATTCGACATCAA+AGG | 0.627655 | 8.4:+48068302 | MS.gene34216:CDS |
TATATGAATATAGGTCAGGT+GGG | 0.636912 | 8.4:-48068752 | None:intergenic |
TCGCCAATGATGCCAAATGT+GGG | 0.638534 | 8.4:-48068168 | None:intergenic |
ACAACGCCGATGTCATCGAT+AGG | 0.638817 | 8.4:+48066353 | MS.gene34216:CDS |
CGACCAGTCTCATTTCTCGC+CGG | 0.645753 | 8.4:+48066446 | MS.gene34216:CDS |
TCCGGGAAAACTGTAAACAT+CGG | 0.646181 | 8.4:-48066635 | None:intergenic |
GAGATTGGTGCAATTCAAGA+GGG | 0.651966 | 8.4:-48066764 | None:intergenic |
TATCTAGAGTTTCGAGTACG+GGG | 0.652748 | 8.4:-48067999 | None:intergenic |
GAATGTGGCGAGATTTACGG+AGG | 0.663346 | 8.4:-48066585 | None:intergenic |
ACTGTCACCTTCAAGAACAT+GGG | 0.664797 | 8.4:+48068693 | MS.gene34216:CDS |
ACTCATCCTATCGATGACAT+CGG | 0.671936 | 8.4:-48066359 | None:intergenic |
TTTAGAATGGAGGTGCGAAG+CGG | 0.678446 | 8.4:-48068419 | None:intergenic |
GATAAACCATATCATCACCA+TGG | 0.684982 | 8.4:-48066732 | None:intergenic |
GGGAAAACTGTAAACATCGG+AGG | 0.685985 | 8.4:-48066632 | None:intergenic |
AGACGTTTAGATGCTCCCAA+AGG | 0.690304 | 8.4:-48066477 | None:intergenic |
AATGTGGCGAGATTTACGGA+GGG | 0.699134 | 8.4:-48066584 | None:intergenic |
GAGACTGGTCGTCATGACGG+AGG | 0.708481 | 8.4:-48066434 | None:intergenic |
AACTACCTCCGAGATCTAGG+TGG | 0.714851 | 8.4:+48068264 | MS.gene34216:CDS |
AGATTAACTGATATACCAAG+GGG | 0.725053 | 8.4:+48068907 | MS.gene34216:CDS |
TGGCGACTTGCAGAGCATGG+AGG | 0.730260 | 8.4:+48068185 | MS.gene34216:CDS |
AATCACCACCTAGATCTCGG+AGG | 0.782019 | 8.4:-48068269 | None:intergenic |
GGGCTTGGTATAGAGTACGG+TGG | 0.786992 | 8.4:+48068132 | MS.gene34216:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATATTTAATCATATGAAAT+TGG | + | chr8.4:48067569-48067588 | MS.gene34216:intron | 10.0% |
!! | AAAAAAATAAACAAATTTGG+AGG | + | chr8.4:48067179-48067198 | MS.gene34216:intron | 15.0% |
!!! | ACTTCATAAAAATGAATTTT+TGG | - | chr8.4:48067682-48067701 | None:intergenic | 15.0% |
!!! | AGTTTGAGTATTTTTTTATA+GGG | + | chr8.4:48067313-48067332 | MS.gene34216:intron | 15.0% |
!!! | GGTTAAATTAAATCAATTTT+TGG | + | chr8.4:48068582-48068601 | MS.gene34216:intron | 15.0% |
!! | AAATTCTGGATAATTTAGAA+TGG | - | chr8.4:48068435-48068454 | None:intergenic | 20.0% |
!! | ATATCCTTCTATATGAATAT+AGG | - | chr8.4:48068764-48068783 | None:intergenic | 20.0% |
!! | TAAATATGGAAATGAAAACT+TGG | + | chr8.4:48067608-48067627 | MS.gene34216:intron | 20.0% |
!!! | ATTTTTTTATAGGGGATTAA+GGG | + | chr8.4:48067322-48067341 | MS.gene34216:intron | 20.0% |
!!! | CAGAATGTTGAAATTTTAAA+TGG | - | chr8.4:48067858-48067877 | None:intergenic | 20.0% |
!!! | GAATCAATTAGAATCAATTT+TGG | + | chr8.4:48066981-48067000 | MS.gene34216:intron | 20.0% |
!!! | GAGTTTGAGTATTTTTTTAT+AGG | + | chr8.4:48067312-48067331 | MS.gene34216:intron | 20.0% |
!!! | GTTTGAGTATTTTTTTATAG+GGG | + | chr8.4:48067314-48067333 | MS.gene34216:intron | 20.0% |
!!! | TATTTTTTTATAGGGGATTA+AGG | + | chr8.4:48067321-48067340 | MS.gene34216:intron | 20.0% |
!!! | TCAATTTTAAACTTGATATC+CGG | - | chr8.4:48067507-48067526 | None:intergenic | 20.0% |
!!! | TTTGGATATCATTTTCTTTA+TGG | - | chr8.4:48067664-48067683 | None:intergenic | 20.0% |
! | AAAAAAATACTCAAACTCCA+GGG | - | chr8.4:48067310-48067329 | None:intergenic | 25.0% |
! | AAAGATTAACTGATATACCA+AGG | + | chr8.4:48068905-48068924 | MS.gene34216:CDS | 25.0% |
! | AAGATTAACTGATATACCAA+GGG | + | chr8.4:48068906-48068925 | MS.gene34216:CDS | 25.0% |
! | AATATAATTGAGTCATTGTG+TGG | + | chr8.4:48068651-48068670 | MS.gene34216:intron | 25.0% |
! | ACTTTCAACATCTTTAATGA+TGG | - | chr8.4:48067892-48067911 | None:intergenic | 25.0% |
! | ATCAATTAATTTCAACCTCT+TGG | - | chr8.4:48068073-48068092 | None:intergenic | 25.0% |
! | TAAAAAAATACTCAAACTCC+AGG | - | chr8.4:48067311-48067330 | None:intergenic | 25.0% |
! | TAATTGATGTGAAATTCTCA+TGG | + | chr8.4:48068085-48068104 | MS.gene34216:CDS | 25.0% |
! | TATACATCTTAGTGTATGTT+TGG | - | chr8.4:48067285-48067304 | None:intergenic | 25.0% |
!! | AGAAGTCAAAGTTGATTTAA+AGG | - | chr8.4:48067250-48067269 | None:intergenic | 25.0% |
!!! | AGGTGTAAAATTGATTTGTT+TGG | - | chr8.4:48067230-48067249 | None:intergenic | 25.0% |
!!! | AGTTTTGTTTTGGCTTTAAA+TGG | + | chr8.4:48067114-48067133 | MS.gene34216:intron | 25.0% |
!!! | CATTTTTTTCGATACTTCAA+TGG | + | chr8.4:48068855-48068874 | MS.gene34216:CDS | 25.0% |
!!! | GCATTGTCATGTTTTAAATA+TGG | + | chr8.4:48067594-48067613 | MS.gene34216:intron | 25.0% |
!!! | GTTTTGTTTTGGCTTTAAAT+GGG | + | chr8.4:48067115-48067134 | MS.gene34216:intron | 25.0% |
!!! | TTTTGTTTTGGCTTTAAATG+GGG | + | chr8.4:48067116-48067135 | MS.gene34216:intron | 25.0% |
AAAAAATACTCAAACTCCAG+GGG | - | chr8.4:48067309-48067328 | None:intergenic | 30.0% | |
AACATTGACATTGAGGATTT+CGG | + | chr8.4:48067934-48067953 | MS.gene34216:CDS | 30.0% | |
AACCCAACACAAAAATTGAT+GGG | - | chr8.4:48067399-48067418 | None:intergenic | 30.0% | |
AGATTAACTGATATACCAAG+GGG | + | chr8.4:48068907-48068926 | MS.gene34216:CDS | 30.0% | |
CTGACCTATATTCATATAGA+AGG | + | chr8.4:48068757-48068776 | MS.gene34216:CDS | 30.0% | |
CTTCTATATGAATATAGGTC+AGG | - | chr8.4:48068759-48068778 | None:intergenic | 30.0% | |
TAACCCAACACAAAAATTGA+TGG | - | chr8.4:48067400-48067419 | None:intergenic | 30.0% | |
TATATGAATATAGGTCAGGT+GGG | - | chr8.4:48068755-48068774 | None:intergenic | 30.0% | |
TATTGAGAGACAAATCTTGA+AGG | - | chr8.4:48066702-48066721 | None:intergenic | 30.0% | |
TGATGCAAATTGCAAAATTC+TGG | - | chr8.4:48068449-48068468 | None:intergenic | 30.0% | |
! | AAACACAACTCTCTTTTAGT+CGG | - | chr8.4:48066888-48066907 | None:intergenic | 30.0% |
! | AATGTTTTCAAAAGACAGGT+TGG | - | chr8.4:48067816-48067835 | None:intergenic | 30.0% |
! | CATTTTCTTTATGGTGCATA+TGG | - | chr8.4:48067655-48067674 | None:intergenic | 30.0% |
! | GCAAACTTTCTGAACTTTTT+GGG | - | chr8.4:48066541-48066560 | None:intergenic | 30.0% |
! | GCTGAATATATTTTGCGTAA+CGG | + | chr8.4:48068811-48068830 | MS.gene34216:CDS | 30.0% |
! | GTGATGAAAGCATGAAATTA+GGG | - | chr8.4:48066805-48066824 | None:intergenic | 30.0% |
! | TAGAACAGTTCTTGTTTGTT+AGG | - | chr8.4:48068882-48068901 | None:intergenic | 30.0% |
! | TGAGATGAAATTTTCGAATG+TGG | - | chr8.4:48066603-48066622 | None:intergenic | 30.0% |
! | TGCAAACTTTCTGAACTTTT+TGG | - | chr8.4:48066542-48066561 | None:intergenic | 30.0% |
! | TGTGATGAAAGCATGAAATT+AGG | - | chr8.4:48066806-48066825 | None:intergenic | 30.0% |
! | TTCTGGATAATTTAGAATGG+AGG | - | chr8.4:48068432-48068451 | None:intergenic | 30.0% |
ACCCAACACAAAAATTGATG+GGG | - | chr8.4:48067398-48067417 | None:intergenic | 35.0% | |
AGCCAAAACAAAACTTTGCA+TGG | - | chr8.4:48067109-48067128 | None:intergenic | 35.0% | |
ATGAAATTAGGGTTACCTGA+GGG | - | chr8.4:48066794-48066813 | None:intergenic | 35.0% | |
CAAGAAATAGGGAGAAAAGT+AGG | - | chr8.4:48068025-48068044 | None:intergenic | 35.0% | |
CAGCTGAGTCAAATTTAAGT+TGG | - | chr8.4:48068945-48068964 | None:intergenic | 35.0% | |
CTATATGAATATAGGTCAGG+TGG | - | chr8.4:48068756-48068775 | None:intergenic | 35.0% | |
CTCAATATTACAAACTGCCA+TGG | + | chr8.4:48066715-48066734 | MS.gene34216:CDS | 35.0% | |
GAAAGTCGAATTCAGCATAT+TGG | + | chr8.4:48067906-48067925 | MS.gene34216:CDS | 35.0% | |
GACTAAAAGAGAGTTGTGTT+TGG | + | chr8.4:48066887-48066906 | MS.gene34216:intron | 35.0% | |
GATAAACCATATCATCACCA+TGG | - | chr8.4:48066735-48066754 | None:intergenic | 35.0% | |
GATAAATTCACTTTCACGCA+AGG | - | chr8.4:48068232-48068251 | None:intergenic | 35.0% | |
GCCTTGAAATAGATTCTGAT+GGG | + | chr8.4:48068112-48068131 | MS.gene34216:CDS | 35.0% | |
TAGAGGGAATCAAATTTGAG+AGG | - | chr8.4:48067065-48067084 | None:intergenic | 35.0% | |
TCAAGAATTTGAAGATGAGC+TGG | + | chr8.4:48068783-48068802 | MS.gene34216:CDS | 35.0% | |
TCAATACTTGTCTTTCTCTC+TGG | + | chr8.4:48067973-48067992 | MS.gene34216:CDS | 35.0% | |
TCTCATAATTCAGAGTAGCA+AGG | + | chr8.4:48068544-48068563 | MS.gene34216:CDS | 35.0% | |
TGAAAACATTGCAGTCTCTT+TGG | + | chr8.4:48067826-48067845 | MS.gene34216:intron | 35.0% | |
TGCCTTGAAATAGATTCTGA+TGG | + | chr8.4:48068111-48068130 | MS.gene34216:CDS | 35.0% | |
TGGAGTAAAAACACCCATTT+GGG | + | chr8.4:48067001-48067020 | MS.gene34216:intron | 35.0% | |
TTATAGGGGATTAAGGGTTA+GGG | + | chr8.4:48067328-48067347 | MS.gene34216:intron | 35.0% | |
TTGGAGTAAAAACACCCATT+TGG | + | chr8.4:48067000-48067019 | MS.gene34216:intron | 35.0% | |
TTGTACACGATAACAAGTGA+TGG | - | chr8.4:48068392-48068411 | None:intergenic | 35.0% | |
TTTATAGGGGATTAAGGGTT+AGG | + | chr8.4:48067327-48067346 | MS.gene34216:intron | 35.0% | |
! | AACTTTGACTTCTCTAGAAG+TGG | + | chr8.4:48067257-48067276 | MS.gene34216:intron | 35.0% |
! | ATCCCCATCAATTTTTGTGT+TGG | + | chr8.4:48067393-48067412 | MS.gene34216:intron | 35.0% |
! | CTGCAATGTTTTCAAAAGAC+AGG | - | chr8.4:48067820-48067839 | None:intergenic | 35.0% |
! | TCCCCATCAATTTTTGTGTT+GGG | + | chr8.4:48067394-48067413 | MS.gene34216:intron | 35.0% |
! | TTTTGGTAGGAAGGAATGAT+AGG | - | chr8.4:48066414-48066433 | None:intergenic | 35.0% |
!! | AGACAAGTATTGAATCCGTA+AGG | - | chr8.4:48067966-48067985 | None:intergenic | 35.0% |
!! | TTAGGAACTGTTGTTGACTT+TGG | - | chr8.4:48068721-48068740 | None:intergenic | 35.0% |
!!! | GTCCATGCAAAGTTTTGTTT+TGG | + | chr8.4:48067104-48067123 | MS.gene34216:intron | 35.0% |
AAACCCACATTTGGCATCAT+TGG | + | chr8.4:48068165-48068184 | MS.gene34216:CDS | 40.0% | |
AACTGTCACCTTCAAGAACA+TGG | + | chr8.4:48068692-48068711 | MS.gene34216:CDS | 40.0% | |
AATTTCAACCTCTTGGCAGA+AGG | - | chr8.4:48068066-48068085 | None:intergenic | 40.0% | |
ACACTAAGATGTATAACCCC+TGG | + | chr8.4:48067290-48067309 | MS.gene34216:intron | 40.0% | |
ACTCATCCTATCGATGACAT+CGG | - | chr8.4:48066362-48066381 | None:intergenic | 40.0% | |
ACTGTCACCTTCAAGAACAT+GGG | + | chr8.4:48068693-48068712 | MS.gene34216:CDS | 40.0% | |
AGAAGATTCGTGTTGAAGCA+GGG | - | chr8.4:48068488-48068507 | None:intergenic | 40.0% | |
AGAGACAAATCTTGAAGGTG+GGG | - | chr8.4:48066697-48066716 | None:intergenic | 40.0% | |
AGGTGGGATTCAAGACATTT+AGG | - | chr8.4:48068739-48068758 | None:intergenic | 40.0% | |
CATGAAATTAGGGTTACCTG+AGG | - | chr8.4:48066795-48066814 | None:intergenic | 40.0% | |
GAGAGACAAATCTTGAAGGT+GGG | - | chr8.4:48066698-48066717 | None:intergenic | 40.0% | |
GAGATTGGTGCAATTCAAGA+GGG | - | chr8.4:48066767-48066786 | None:intergenic | 40.0% | |
GATTCCCTCTATGCCAATTT+CGG | + | chr8.4:48067074-48067093 | MS.gene34216:intron | 40.0% | |
GCCCATCAGAATCTATTTCA+AGG | - | chr8.4:48068116-48068135 | None:intergenic | 40.0% | |
GGAACACAACATTGACATTG+AGG | + | chr8.4:48067927-48067946 | MS.gene34216:CDS | 40.0% | |
GGAACTCTGGTCAAGAAATA+GGG | - | chr8.4:48068036-48068055 | None:intergenic | 40.0% | |
GGAGTAAAAACACCCATTTG+GGG | + | chr8.4:48067002-48067021 | MS.gene34216:intron | 40.0% | |
GTAAATCACCACCTAGATCT+CGG | - | chr8.4:48068275-48068294 | None:intergenic | 40.0% | |
TAAACTTGATATCCGGACCA+AGG | - | chr8.4:48067500-48067519 | None:intergenic | 40.0% | |
TAGGAAGGAATGATAGGATG+TGG | - | chr8.4:48066408-48066427 | None:intergenic | 40.0% | |
TCCGGGAAAACTGTAAACAT+CGG | - | chr8.4:48066638-48066657 | None:intergenic | 40.0% | |
TGAGAGACAAATCTTGAAGG+TGG | - | chr8.4:48066699-48066718 | None:intergenic | 40.0% | |
TGCAACATCAAACCCACATT+TGG | + | chr8.4:48068156-48068175 | MS.gene34216:CDS | 40.0% | |
TTCGAATGTGGCGAGATTTA+CGG | - | chr8.4:48066591-48066610 | None:intergenic | 40.0% | |
! | AAACTGCCATGGTGATGATA+TGG | + | chr8.4:48066726-48066745 | MS.gene34216:CDS | 40.0% |
! | GGTATCTAGAGTTTCGAGTA+CGG | - | chr8.4:48068004-48068023 | None:intergenic | 40.0% |
! | GTATCTAGAGTTTCGAGTAC+GGG | - | chr8.4:48068003-48068022 | None:intergenic | 40.0% |
! | TAAAAACACCCATTTGGGGT+TGG | + | chr8.4:48067006-48067025 | MS.gene34216:intron | 40.0% |
! | TATCTAGAGTTTCGAGTACG+GGG | - | chr8.4:48068002-48068021 | None:intergenic | 40.0% |
! | TCCGATGTTTACAGTTTTCC+CGG | + | chr8.4:48066634-48066653 | MS.gene34216:CDS | 40.0% |
!! | AACTTTGCTCTGGCTTTGAT+TGG | + | chr8.4:48067430-48067449 | MS.gene34216:intron | 40.0% |
!! | GAAATAGATTCTGATGGGCT+TGG | + | chr8.4:48068117-48068136 | MS.gene34216:CDS | 40.0% |
!! | TTGTGTGGCTTGTTGATTCT+AGG | + | chr8.4:48068666-48068685 | MS.gene34216:intron | 40.0% |
AATGTGGCGAGATTTACGGA+GGG | - | chr8.4:48066587-48066606 | None:intergenic | 45.0% | |
AGACGTTTAGATGCTCCCAA+AGG | - | chr8.4:48066480-48066499 | None:intergenic | 45.0% | |
AGCCAGAGCAAAGTTGTGTA+TGG | - | chr8.4:48067425-48067444 | None:intergenic | 45.0% | |
CACATGTAGACACATTCTCC+GGG | - | chr8.4:48066655-48066674 | None:intergenic | 45.0% | |
CAGAAGATTCGTGTTGAAGC+AGG | - | chr8.4:48068489-48068508 | None:intergenic | 45.0% | |
CCACATGTAGACACATTCTC+CGG | - | chr8.4:48066656-48066675 | None:intergenic | 45.0% | |
CGAGATTGGTGCAATTCAAG+AGG | - | chr8.4:48066768-48066787 | None:intergenic | 45.0% | |
CGGAGAATGTGTCTACATGT+GGG | + | chr8.4:48066654-48066673 | MS.gene34216:CDS | 45.0% | |
GCAAGGTTTGTAGAGTTCTC+AGG | + | chr8.4:48068561-48068580 | MS.gene34216:intron | 45.0% | |
GCTTTGATTGGACCTAGTAG+TGG | + | chr8.4:48067442-48067461 | MS.gene34216:intron | 45.0% | |
GGAATGATAGGATGTGGCAT+AGG | - | chr8.4:48066402-48066421 | None:intergenic | 45.0% | |
GGATTTCGGCAAACACCTTA+CGG | + | chr8.4:48067948-48067967 | MS.gene34216:CDS | 45.0% | |
GGGAAAACTGTAAACATCGG+AGG | - | chr8.4:48066635-48066654 | None:intergenic | 45.0% | |
GGGAACTCTGGTCAAGAAAT+AGG | - | chr8.4:48068037-48068056 | None:intergenic | 45.0% | |
GGGATTAAGGGTTAGGGTTT+GGG | + | chr8.4:48067334-48067353 | MS.gene34216:intron | 45.0% | |
GTCCATACACAACTTTGCTC+TGG | + | chr8.4:48067420-48067439 | MS.gene34216:intron | 45.0% | |
TCGCCAATGATGCCAAATGT+GGG | - | chr8.4:48068171-48068190 | None:intergenic | 45.0% | |
TCTGCGTCATTCGACATCAA+AGG | + | chr8.4:48068302-48068321 | MS.gene34216:CDS | 45.0% | |
TGCAATTCAAGAGGGAAGGA+GGG | - | chr8.4:48066759-48066778 | None:intergenic | 45.0% | |
TTACCTGAGGGAAACGAGAT+TGG | - | chr8.4:48066782-48066801 | None:intergenic | 45.0% | |
TTGGTGCAATTCAAGAGGGA+AGG | - | chr8.4:48066763-48066782 | None:intergenic | 45.0% | |
! | AATGAGACTGGTCGTCATGA+CGG | - | chr8.4:48066440-48066459 | None:intergenic | 45.0% |
! | GATGGGCTTGGTATAGAGTA+CGG | + | chr8.4:48068129-48068148 | MS.gene34216:CDS | 45.0% |
! | TGATTGGACCTAGTAGTGGA+CGG | + | chr8.4:48067446-48067465 | MS.gene34216:intron | 45.0% |
! | TTTAGAATGGAGGTGCGAAG+CGG | - | chr8.4:48068422-48068441 | None:intergenic | 45.0% |
! | TTTGGCTCCCATGTTCTTGA+AGG | - | chr8.4:48068703-48068722 | None:intergenic | 45.0% |
!! | GTTGAGTTGGTCTGCAGATT+AGG | + | chr8.4:48067468-48067487 | MS.gene34216:intron | 45.0% |
!! | AAAAAAAAAATAAACAAATT+TGG | + | chr8.4:48067176-48067195 | MS.gene34216:intron | 5.0% |
AACTACCTCCGAGATCTAGG+TGG | + | chr8.4:48068264-48068283 | MS.gene34216:CDS | 50.0% | |
AATCACCACCTAGATCTCGG+AGG | - | chr8.4:48068272-48068291 | None:intergenic | 50.0% | |
ACAACGCCGATGTCATCGAT+AGG | + | chr8.4:48066353-48066372 | MS.gene34216:CDS | 50.0% | |
ATCTTGAAGGTGGGGTCCAA+TGG | - | chr8.4:48066689-48066708 | None:intergenic | 50.0% | |
ATGGACTTGCCCACCGAAAT+TGG | - | chr8.4:48067090-48067109 | None:intergenic | 50.0% | |
ATGTGGCATAGGAGTGAGTC+TGG | - | chr8.4:48066391-48066410 | None:intergenic | 50.0% | |
ATTAGGTGTGGTCCTTGGTC+CGG | + | chr8.4:48067485-48067504 | MS.gene34216:intron | 50.0% | |
CAACTCAACCGTCCACTACT+AGG | - | chr8.4:48067457-48067476 | None:intergenic | 50.0% | |
CCCACCGAAATTGGCATAGA+GGG | - | chr8.4:48067081-48067100 | None:intergenic | 50.0% | |
CCCTCTATGCCAATTTCGGT+GGG | + | chr8.4:48067078-48067097 | MS.gene34216:intron | 50.0% | |
CCGGAGAATGTGTCTACATG+TGG | + | chr8.4:48066653-48066672 | MS.gene34216:CDS | 50.0% | |
CGTTTAGATGCTCCCAAAGG+TGG | - | chr8.4:48066477-48066496 | None:intergenic | 50.0% | |
CTCAACTACCTCCGAGATCT+AGG | + | chr8.4:48068261-48068280 | MS.gene34216:CDS | 50.0% | |
CTCGGAGGTAGTTGAGCATA+GGG | - | chr8.4:48068257-48068276 | None:intergenic | 50.0% | |
GAATGTGGCGAGATTTACGG+AGG | - | chr8.4:48066588-48066607 | None:intergenic | 50.0% | |
GGGGATTAAGGGTTAGGGTT+TGG | + | chr8.4:48067333-48067352 | MS.gene34216:intron | 50.0% | |
GTCGCCAATGATGCCAAATG+TGG | - | chr8.4:48068172-48068191 | None:intergenic | 50.0% | |
GTGCAATTCAAGAGGGAAGG+AGG | - | chr8.4:48066760-48066779 | None:intergenic | 50.0% | |
TCCCTCTATGCCAATTTCGG+TGG | + | chr8.4:48067077-48067096 | MS.gene34216:intron | 50.0% | |
TCTCGGAGGTAGTTGAGCAT+AGG | - | chr8.4:48068258-48068277 | None:intergenic | 50.0% | |
TGCAGATTAGGTGTGGTCCT+TGG | + | chr8.4:48067480-48067499 | MS.gene34216:intron | 50.0% | |
TTCAACCTCTTGGCAGAAGG+CGG | - | chr8.4:48068063-48068082 | None:intergenic | 50.0% | |
! | GTTGGTCTGCAGATTAGGTG+TGG | + | chr8.4:48067473-48067492 | MS.gene34216:intron | 50.0% |
!! | CTAGTAGTGGACGGTTGAGT+TGG | + | chr8.4:48067455-48067474 | MS.gene34216:intron | 50.0% |
!! | GTCATGACGGAGGTTTTGGT+AGG | - | chr8.4:48066427-48066446 | None:intergenic | 50.0% |
!! | GTTGGACTGGTGGTTGGTTT+GGG | + | chr8.4:48067024-48067043 | MS.gene34216:intron | 50.0% |
!! | TGACGGAGGTTTTGGTAGGA+AGG | - | chr8.4:48066423-48066442 | None:intergenic | 50.0% |
!! | TGGTGGTTGGTTTGGGATGT+TGG | + | chr8.4:48067031-48067050 | MS.gene34216:intron | 50.0% |
AAATGGGGCACGCAAGTGTG+CGG | + | chr8.4:48067131-48067150 | MS.gene34216:intron | 55.0% | |
ACCACCAGTCCAACCCCAAA+TGG | - | chr8.4:48067018-48067037 | None:intergenic | 55.0% | |
ACGAGTCCAACTGCAACTGC+AGG | + | chr8.4:48066512-48066531 | MS.gene34216:CDS | 55.0% | |
CATTGGCGACTTGCAGAGCA+TGG | + | chr8.4:48068182-48068201 | MS.gene34216:CDS | 55.0% | |
CCACCAGTCCAACCCCAAAT+GGG | - | chr8.4:48067017-48067036 | None:intergenic | 55.0% | |
CGACCAGTCTCATTTCTCGC+CGG | + | chr8.4:48066446-48066465 | MS.gene34216:CDS | 55.0% | |
GCACCAATCTCGTTTCCCTC+AGG | + | chr8.4:48066776-48066795 | MS.gene34216:CDS | 55.0% | |
GCCCACCGAAATTGGCATAG+AGG | - | chr8.4:48067082-48067101 | None:intergenic | 55.0% | |
GGGATTCCTGCAGTTGCAGT+TGG | - | chr8.4:48066521-48066540 | None:intergenic | 55.0% | |
! | ACACCCATTTGGGGTTGGAC+TGG | + | chr8.4:48067011-48067030 | MS.gene34216:intron | 55.0% |
! | GGGCTTGGTATAGAGTACGG+TGG | + | chr8.4:48068132-48068151 | MS.gene34216:CDS | 55.0% |
! | GTAAACATCGGAGGTGCAGC+AGG | - | chr8.4:48066626-48066645 | None:intergenic | 55.0% |
!! | GGTCGTCATGACGGAGGTTT+TGG | - | chr8.4:48066431-48066450 | None:intergenic | 55.0% |
!! | GGTTGGACTGGTGGTTGGTT+TGG | + | chr8.4:48067023-48067042 | MS.gene34216:intron | 55.0% |
!! | TTTGGGGTTGGACTGGTGGT+TGG | + | chr8.4:48067018-48067037 | MS.gene34216:intron | 55.0% |
ACGCAAGTGTGCGGTGGGAT+TGG | + | chr8.4:48067140-48067159 | MS.gene34216:intron | 60.0% | |
AGAAGGCGGAACGGGAACTC+TGG | - | chr8.4:48068049-48068068 | None:intergenic | 60.0% | |
ATGTGGGTCCGTGCTGCCAT+TGG | + | chr8.4:48066670-48066689 | MS.gene34216:CDS | 60.0% | |
CCACCGGCGAGAAATGAGAC+TGG | - | chr8.4:48066452-48066471 | None:intergenic | 60.0% | |
CCAGTCTCATTTCTCGCCGG+TGG | + | chr8.4:48066449-48066468 | MS.gene34216:CDS | 60.0% | |
CCTCTTGGCAGAAGGCGGAA+CGG | - | chr8.4:48068058-48068077 | None:intergenic | 60.0% | |
CTCTTGGCAGAAGGCGGAAC+GGG | - | chr8.4:48068057-48068076 | None:intergenic | 60.0% | |
TGGCATGTGACAGAGCCCCT+TGG | - | chr8.4:48068925-48068944 | None:intergenic | 60.0% | |
TGGCGACTTGCAGAGCATGG+AGG | + | chr8.4:48068185-48068204 | MS.gene34216:CDS | 60.0% | |
! | CCCATTTGGGGTTGGACTGG+TGG | + | chr8.4:48067014-48067033 | MS.gene34216:intron | 60.0% |
! | GAGACTGGTCGTCATGACGG+AGG | - | chr8.4:48066437-48066456 | None:intergenic | 60.0% |
CCGTTCCGCCTTCTGCCAAG+AGG | + | chr8.4:48068055-48068074 | MS.gene34216:CDS | 65.0% | |
GGTGGGGTCCAATGGCAGCA+CGG | - | chr8.4:48066681-48066700 | None:intergenic | 65.0% | |
GCTCCCAAAGGTGGCGCCAC+CGG | - | chr8.4:48066468-48066487 | None:intergenic | 70.0% | |
GGGGCACGCAAGTGTGCGGT+GGG | + | chr8.4:48067135-48067154 | MS.gene34216:intron | 70.0% | |
TCGCCGGTGGCGCCACCTTT+GGG | + | chr8.4:48066462-48066481 | MS.gene34216:CDS | 70.0% | |
TGGGGCACGCAAGTGTGCGG+TGG | + | chr8.4:48067134-48067153 | MS.gene34216:intron | 70.0% | |
CTCGCCGGTGGCGCCACCTT+TGG | + | chr8.4:48066461-48066480 | MS.gene34216:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 48066331 | 48068975 | 48066331 | ID=MS.gene34216 |
chr8.4 | mRNA | 48066331 | 48068975 | 48066331 | ID=MS.gene34216.t1;Parent=MS.gene34216 |
chr8.4 | exon | 48066331 | 48066797 | 48066331 | ID=MS.gene34216.t1.exon1;Parent=MS.gene34216.t1 |
chr8.4 | CDS | 48066331 | 48066797 | 48066331 | ID=cds.MS.gene34216.t1;Parent=MS.gene34216.t1 |
chr8.4 | exon | 48067840 | 48068323 | 48067840 | ID=MS.gene34216.t1.exon2;Parent=MS.gene34216.t1 |
chr8.4 | CDS | 48067840 | 48068323 | 48067840 | ID=cds.MS.gene34216.t1;Parent=MS.gene34216.t1 |
chr8.4 | exon | 48068416 | 48068565 | 48068416 | ID=MS.gene34216.t1.exon3;Parent=MS.gene34216.t1 |
chr8.4 | CDS | 48068416 | 48068565 | 48068416 | ID=cds.MS.gene34216.t1;Parent=MS.gene34216.t1 |
chr8.4 | exon | 48068688 | 48068975 | 48068688 | ID=MS.gene34216.t1.exon4;Parent=MS.gene34216.t1 |
chr8.4 | CDS | 48068688 | 48068975 | 48068688 | ID=cds.MS.gene34216.t1;Parent=MS.gene34216.t1 |
Gene Sequence |
Protein sequence |