Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34801.t1 | XP_003628566.2 | 93.3 | 435 | 27 | 1 | 1 | 433 | 1 | 435 | 3.20E-233 | 817.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34801.t1 | Q9FM89 | 26.9 | 438 | 287 | 15 | 6 | 428 | 3 | 422 | 3.9e-22 | 107.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34801.t1 | G7LDT4 | 93.3 | 435 | 27 | 1 | 1 | 433 | 1 | 435 | 2.3e-233 | 817.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34801.t1 | MTR_8g062010 | 93.333 | 435 | 27 | 1 | 1 | 433 | 1 | 435 | 0.0 | 801 |
MS.gene34801.t1 | MTR_8g070950 | 64.155 | 438 | 141 | 8 | 3 | 432 | 9 | 438 | 8.17e-179 | 506 |
MS.gene34801.t1 | MTR_8g062080 | 58.036 | 448 | 159 | 9 | 1 | 432 | 15 | 449 | 2.58e-163 | 468 |
MS.gene34801.t1 | MTR_8g058965 | 57.363 | 455 | 156 | 9 | 9 | 432 | 13 | 460 | 2.73e-162 | 465 |
MS.gene34801.t1 | MTR_8g062310 | 57.991 | 438 | 158 | 8 | 1 | 432 | 15 | 432 | 1.48e-160 | 460 |
MS.gene34801.t1 | MTR_8g469020 | 55.361 | 457 | 163 | 9 | 9 | 432 | 7 | 455 | 4.63e-157 | 452 |
MS.gene34801.t1 | MTR_8g062300 | 55.603 | 464 | 158 | 10 | 9 | 432 | 26 | 481 | 4.96e-154 | 445 |
MS.gene34801.t1 | MTR_4g050250 | 52.670 | 412 | 151 | 11 | 2 | 374 | 14 | 420 | 1.38e-123 | 365 |
MS.gene34801.t1 | MTR_8g467790 | 50.132 | 379 | 141 | 9 | 9 | 372 | 148 | 493 | 9.42e-108 | 328 |
MS.gene34801.t1 | MTR_2g083840 | 43.612 | 454 | 220 | 12 | 3 | 428 | 12 | 457 | 2.76e-97 | 299 |
MS.gene34801.t1 | MTR_8g468810 | 42.198 | 455 | 218 | 20 | 6 | 428 | 22 | 463 | 3.48e-84 | 266 |
MS.gene34801.t1 | MTR_8g062270 | 39.693 | 456 | 224 | 17 | 7 | 427 | 14 | 453 | 1.44e-79 | 253 |
MS.gene34801.t1 | MTR_8g014260 | 40.848 | 448 | 227 | 18 | 8 | 428 | 15 | 451 | 1.53e-78 | 251 |
MS.gene34801.t1 | MTR_8g058970 | 40.129 | 466 | 226 | 16 | 9 | 428 | 19 | 477 | 1.17e-77 | 249 |
MS.gene34801.t1 | MTR_8g467800 | 39.597 | 447 | 230 | 10 | 9 | 428 | 20 | 453 | 1.75e-74 | 240 |
MS.gene34801.t1 | MTR_5g092960 | 39.121 | 455 | 233 | 14 | 7 | 427 | 17 | 461 | 3.06e-72 | 234 |
MS.gene34801.t1 | MTR_4g032730 | 37.908 | 459 | 238 | 13 | 9 | 427 | 15 | 466 | 3.64e-71 | 232 |
MS.gene34801.t1 | MTR_2g086020 | 77.622 | 143 | 32 | 0 | 290 | 432 | 177 | 319 | 3.43e-68 | 219 |
MS.gene34801.t1 | MTR_2g086020 | 49.333 | 150 | 59 | 5 | 35 | 175 | 1 | 142 | 4.87e-33 | 127 |
MS.gene34801.t1 | MTR_8g468760 | 36.324 | 457 | 222 | 14 | 1 | 427 | 1 | 418 | 2.98e-64 | 213 |
MS.gene34801.t1 | MTR_8g468840 | 38.255 | 447 | 237 | 13 | 8 | 426 | 13 | 448 | 5.06e-64 | 213 |
MS.gene34801.t1 | MTR_8g445780 | 39.356 | 404 | 203 | 16 | 2 | 381 | 5 | 390 | 3.92e-62 | 206 |
MS.gene34801.t1 | MTR_8g468810 | 41.598 | 363 | 169 | 18 | 6 | 338 | 22 | 371 | 3.51e-57 | 192 |
MS.gene34801.t1 | MTR_8g014160 | 35.778 | 450 | 208 | 19 | 1 | 428 | 35 | 425 | 1.27e-56 | 192 |
MS.gene34801.t1 | MTR_5g092960 | 38.950 | 362 | 184 | 11 | 7 | 338 | 17 | 371 | 6.67e-49 | 171 |
MS.gene34801.t1 | MTR_8g468810 | 43.103 | 290 | 130 | 14 | 6 | 272 | 22 | 299 | 1.98e-46 | 163 |
MS.gene34801.t1 | MTR_8g468810 | 43.103 | 290 | 130 | 14 | 6 | 272 | 22 | 299 | 2.95e-46 | 162 |
MS.gene34801.t1 | MTR_8g468810 | 43.103 | 290 | 130 | 14 | 6 | 272 | 22 | 299 | 5.71e-46 | 162 |
MS.gene34801.t1 | MTR_4g024710 | 38.487 | 304 | 155 | 12 | 145 | 428 | 56 | 347 | 4.15e-44 | 157 |
MS.gene34801.t1 | MTR_8g467800 | 40.925 | 281 | 142 | 7 | 9 | 272 | 20 | 293 | 4.15e-40 | 147 |
MS.gene34801.t1 | MTR_8g077460 | 50.376 | 133 | 63 | 3 | 296 | 428 | 246 | 375 | 4.20e-34 | 131 |
MS.gene34801.t1 | MTR_8g077460 | 40.969 | 227 | 111 | 11 | 1 | 211 | 1 | 220 | 1.56e-26 | 110 |
MS.gene34801.t1 | MTR_8g014210 | 39.831 | 236 | 123 | 9 | 205 | 428 | 3 | 231 | 8.27e-34 | 127 |
MS.gene34801.t1 | MTR_5g021550 | 46.980 | 149 | 73 | 4 | 5 | 148 | 15 | 162 | 8.35e-31 | 116 |
MS.gene34801.t1 | MTR_4g024745 | 36.029 | 272 | 148 | 11 | 154 | 407 | 17 | 280 | 2.45e-30 | 119 |
MS.gene34801.t1 | MTR_3g099800 | 63.218 | 87 | 31 | 1 | 340 | 425 | 19 | 105 | 5.57e-28 | 107 |
MS.gene34801.t1 | MTR_1g041245 | 28.764 | 445 | 223 | 21 | 9 | 428 | 11 | 386 | 1.02e-27 | 114 |
MS.gene34801.t1 | MTR_5g008950 | 27.880 | 434 | 228 | 17 | 11 | 428 | 1 | 365 | 1.02e-27 | 113 |
MS.gene34801.t1 | MTR_7g056433 | 27.816 | 435 | 244 | 16 | 8 | 428 | 11 | 389 | 3.99e-27 | 112 |
MS.gene34801.t1 | MTR_3g108150 | 28.276 | 435 | 239 | 18 | 7 | 427 | 11 | 386 | 4.29e-27 | 112 |
MS.gene34801.t1 | MTR_2g036470 | 27.394 | 449 | 243 | 21 | 2 | 427 | 7 | 395 | 2.96e-26 | 109 |
MS.gene34801.t1 | MTR_5g084070 | 27.189 | 434 | 287 | 12 | 1 | 420 | 1 | 419 | 8.97e-26 | 108 |
MS.gene34801.t1 | MTR_7g056287 | 27.252 | 433 | 237 | 16 | 9 | 427 | 3 | 371 | 1.25e-25 | 107 |
MS.gene34801.t1 | MTR_7g056277 | 27.483 | 433 | 236 | 16 | 9 | 427 | 259 | 627 | 3.52e-25 | 108 |
MS.gene34801.t1 | MTR_7g115270 | 26.437 | 435 | 257 | 18 | 8 | 425 | 11 | 399 | 1.67e-23 | 102 |
MS.gene34801.t1 | MTR_5g080710 | 26.869 | 428 | 283 | 13 | 9 | 420 | 33 | 446 | 1.47e-22 | 100 |
MS.gene34801.t1 | MTR_1g108820 | 29.812 | 426 | 240 | 18 | 9 | 425 | 8 | 383 | 5.46e-22 | 97.4 |
MS.gene34801.t1 | MTR_7g026500 | 26.879 | 439 | 243 | 18 | 9 | 427 | 14 | 394 | 6.46e-22 | 97.4 |
MS.gene34801.t1 | MTR_8g014290 | 42.308 | 156 | 76 | 6 | 5 | 148 | 6 | 159 | 6.93e-22 | 92.0 |
MS.gene34801.t1 | MTR_2g007450 | 27.966 | 472 | 238 | 22 | 1 | 425 | 1 | 417 | 1.14e-21 | 97.1 |
MS.gene34801.t1 | MTR_6g040270 | 27.714 | 433 | 231 | 19 | 11 | 425 | 10 | 378 | 1.21e-21 | 96.3 |
MS.gene34801.t1 | MTR_7g033915 | 27.400 | 427 | 229 | 18 | 9 | 427 | 11 | 364 | 1.50e-21 | 95.9 |
MS.gene34801.t1 | MTR_0543s0010 | 26.316 | 437 | 235 | 14 | 7 | 427 | 84 | 449 | 5.10e-21 | 95.1 |
MS.gene34801.t1 | MTR_7g098510 | 25.561 | 446 | 246 | 11 | 3 | 428 | 12 | 391 | 9.03e-21 | 94.0 |
MS.gene34801.t1 | MTR_2g008310 | 27.397 | 438 | 232 | 19 | 9 | 428 | 2 | 371 | 3.18e-20 | 92.4 |
MS.gene34801.t1 | MTR_3g087260 | 28.333 | 480 | 250 | 20 | 8 | 427 | 11 | 456 | 1.85e-19 | 90.5 |
MS.gene34801.t1 | MTR_7g098480 | 25.282 | 443 | 247 | 14 | 3 | 427 | 12 | 388 | 1.76e-18 | 87.8 |
MS.gene34801.t1 | MTR_0009s0080 | 25.686 | 401 | 229 | 16 | 11 | 395 | 20 | 367 | 3.13e-18 | 86.7 |
MS.gene34801.t1 | MTR_3g036250 | 24.480 | 433 | 237 | 13 | 9 | 425 | 5 | 363 | 3.93e-18 | 85.9 |
MS.gene34801.t1 | MTR_1g085120 | 25.740 | 439 | 248 | 17 | 9 | 428 | 92 | 471 | 4.13e-18 | 86.7 |
MS.gene34801.t1 | MTR_5g058000 | 26.512 | 430 | 242 | 18 | 9 | 427 | 8 | 374 | 7.83e-18 | 85.1 |
MS.gene34801.t1 | MTR_7g098570 | 25.571 | 438 | 236 | 16 | 9 | 424 | 20 | 389 | 8.63e-18 | 85.9 |
MS.gene34801.t1 | MTR_1g085120 | 26.977 | 430 | 254 | 16 | 9 | 428 | 167 | 546 | 1.02e-17 | 85.9 |
MS.gene34801.t1 | MTR_3g108560 | 25.858 | 437 | 240 | 17 | 8 | 427 | 19 | 388 | 1.39e-17 | 84.3 |
MS.gene34801.t1 | MTR_4g080787 | 24.733 | 469 | 291 | 15 | 3 | 427 | 13 | 463 | 2.73e-17 | 84.3 |
MS.gene34801.t1 | MTR_8g085430 | 32.995 | 197 | 113 | 8 | 9 | 193 | 11 | 200 | 2.91e-17 | 82.8 |
MS.gene34801.t1 | MTR_3g107120 | 27.430 | 463 | 244 | 23 | 1 | 433 | 1 | 401 | 2.99e-17 | 83.6 |
MS.gene34801.t1 | MTR_0492s0020 | 25.845 | 414 | 216 | 15 | 7 | 400 | 84 | 426 | 5.84e-17 | 82.8 |
MS.gene34801.t1 | MTR_3g023630 | 33.005 | 203 | 116 | 8 | 6 | 199 | 5 | 196 | 7.08e-17 | 82.0 |
MS.gene34801.t1 | MTR_7g032380 | 33.854 | 192 | 109 | 8 | 9 | 192 | 11 | 192 | 1.11e-16 | 81.3 |
MS.gene34801.t1 | MTR_7g032380 | 29.775 | 178 | 103 | 6 | 266 | 428 | 186 | 356 | 1.03e-12 | 69.3 |
MS.gene34801.t1 | MTR_3g107160 | 26.879 | 439 | 246 | 17 | 6 | 428 | 4 | 383 | 1.13e-16 | 81.6 |
MS.gene34801.t1 | MTR_4g056030 | 28.673 | 422 | 257 | 16 | 9 | 400 | 9 | 416 | 1.79e-16 | 81.6 |
MS.gene34801.t1 | MTR_7g056447 | 33.498 | 203 | 105 | 10 | 1 | 190 | 1 | 186 | 3.79e-16 | 79.0 |
MS.gene34801.t1 | MTR_4g056020 | 35.294 | 204 | 108 | 8 | 1 | 191 | 1 | 193 | 7.55e-16 | 79.7 |
MS.gene34801.t1 | MTR_8g014230 | 42.857 | 84 | 46 | 2 | 338 | 421 | 17 | 98 | 2.01e-15 | 72.4 |
MS.gene34801.t1 | MTR_6g022360 | 24.537 | 432 | 246 | 14 | 9 | 427 | 43 | 407 | 2.19e-15 | 78.2 |
MS.gene34801.t1 | MTR_5g083890 | 24.829 | 439 | 240 | 19 | 8 | 410 | 5 | 389 | 3.06e-15 | 78.2 |
MS.gene34801.t1 | MTR_4g024720 | 34.731 | 167 | 85 | 5 | 5 | 149 | 13 | 177 | 3.51e-15 | 74.7 |
MS.gene34801.t1 | MTR_1g115245 | 35.185 | 162 | 88 | 7 | 3 | 156 | 18 | 170 | 2.75e-14 | 73.6 |
MS.gene34801.t1 | MTR_1g066830 | 25.761 | 427 | 261 | 18 | 9 | 427 | 8 | 386 | 3.18e-14 | 74.3 |
MS.gene34801.t1 | MTR_4g056040 | 26.789 | 489 | 218 | 20 | 1 | 396 | 1 | 442 | 5.32e-14 | 74.3 |
MS.gene34801.t1 | MTR_4g080773 | 24.229 | 454 | 288 | 16 | 3 | 416 | 13 | 450 | 5.83e-14 | 73.9 |
MS.gene34801.t1 | MTR_3g107100 | 31.034 | 203 | 126 | 7 | 9 | 204 | 11 | 206 | 5.99e-14 | 73.6 |
MS.gene34801.t1 | MTR_4g080773 | 24.229 | 454 | 288 | 16 | 3 | 416 | 13 | 450 | 6.58e-14 | 73.9 |
MS.gene34801.t1 | MTR_5g045510 | 23.810 | 399 | 221 | 16 | 9 | 395 | 12 | 339 | 2.52e-13 | 71.6 |
MS.gene34801.t1 | MTR_2g007500 | 33.171 | 205 | 102 | 9 | 1 | 193 | 6 | 187 | 2.60e-13 | 71.2 |
MS.gene34801.t1 | MTR_1089s0010 | 33.813 | 139 | 80 | 5 | 297 | 428 | 246 | 379 | 2.70e-13 | 71.2 |
MS.gene34801.t1 | MTR_7g032370 | 32.778 | 180 | 104 | 8 | 20 | 192 | 1 | 170 | 4.15e-13 | 70.5 |
MS.gene34801.t1 | MTR_7g032370 | 32.847 | 137 | 84 | 3 | 299 | 428 | 217 | 352 | 2.40e-12 | 68.2 |
MS.gene34801.t1 | MTR_1g038710 | 25.602 | 457 | 264 | 15 | 9 | 416 | 19 | 448 | 1.61e-12 | 69.3 |
MS.gene34801.t1 | MTR_2g047858 | 33.158 | 190 | 116 | 8 | 9 | 191 | 115 | 300 | 2.00e-12 | 69.3 |
MS.gene34801.t1 | MTR_4g081030 | 26.062 | 353 | 180 | 13 | 7 | 322 | 15 | 323 | 3.50e-12 | 68.2 |
MS.gene34801.t1 | MTR_5g008920 | 31.188 | 202 | 119 | 9 | 1 | 193 | 1 | 191 | 3.57e-12 | 68.2 |
MS.gene34801.t1 | MTR_5g073420 | 34.021 | 194 | 108 | 11 | 9 | 191 | 11 | 195 | 5.49e-12 | 67.4 |
MS.gene34801.t1 | MTR_7g088260 | 31.500 | 200 | 104 | 10 | 6 | 191 | 88 | 268 | 5.69e-12 | 67.8 |
MS.gene34801.t1 | MTR_7g056430 | 30.208 | 192 | 102 | 8 | 1 | 191 | 1 | 161 | 7.79e-12 | 68.2 |
MS.gene34801.t1 | MTR_2g005990 | 32.512 | 203 | 109 | 11 | 9 | 191 | 6 | 200 | 8.25e-12 | 67.0 |
MS.gene34801.t1 | MTR_7g056420 | 30.208 | 192 | 102 | 8 | 1 | 191 | 1 | 161 | 9.09e-12 | 67.8 |
MS.gene34801.t1 | MTR_5g012840 | 29.843 | 191 | 104 | 7 | 243 | 428 | 153 | 318 | 1.10e-11 | 65.9 |
MS.gene34801.t1 | MTR_5g039950 | 25.432 | 405 | 246 | 13 | 8 | 395 | 22 | 387 | 1.84e-11 | 65.9 |
MS.gene34801.t1 | MTR_4g024770 | 50.000 | 60 | 26 | 2 | 3 | 59 | 15 | 73 | 2.74e-11 | 59.7 |
MS.gene34801.t1 | MTR_3g040700 | 27.670 | 206 | 122 | 8 | 9 | 201 | 43 | 234 | 3.21e-11 | 65.5 |
MS.gene34801.t1 | MTR_3g467400 | 28.708 | 209 | 116 | 9 | 9 | 194 | 3 | 201 | 3.32e-11 | 65.1 |
MS.gene34801.t1 | MTR_5g054920 | 29.358 | 109 | 75 | 1 | 291 | 397 | 71 | 179 | 3.34e-11 | 62.8 |
MS.gene34801.t1 | MTR_7g055943 | 31.313 | 198 | 115 | 10 | 4 | 191 | 35 | 221 | 3.41e-11 | 65.1 |
MS.gene34801.t1 | MTR_3g110010 | 34.715 | 193 | 106 | 11 | 8 | 193 | 12 | 191 | 4.88e-11 | 65.5 |
MS.gene34801.t1 | MTR_3g109982 | 34.715 | 193 | 106 | 11 | 8 | 193 | 12 | 191 | 5.24e-11 | 65.1 |
MS.gene34801.t1 | MTR_2g047872 | 32.323 | 198 | 116 | 10 | 9 | 194 | 23 | 214 | 6.83e-11 | 64.3 |
MS.gene34801.t1 | MTR_2g091145 | 25.553 | 407 | 264 | 17 | 9 | 395 | 21 | 408 | 8.46e-11 | 63.9 |
MS.gene34801.t1 | MTR_7g034115 | 34.375 | 192 | 106 | 10 | 9 | 191 | 11 | 191 | 8.79e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34801.t1 | AT5G56420 | 27.778 | 450 | 268 | 20 | 6 | 428 | 3 | 422 | 9.25e-24 | 103 |
MS.gene34801.t1 | AT5G56420 | 27.778 | 450 | 268 | 20 | 6 | 428 | 3 | 422 | 9.25e-24 | 103 |
MS.gene34801.t1 | AT5G56420 | 27.778 | 450 | 268 | 20 | 6 | 428 | 3 | 422 | 9.25e-24 | 103 |
MS.gene34801.t1 | AT4G10400 | 26.757 | 441 | 267 | 15 | 9 | 427 | 2 | 408 | 1.78e-22 | 99.4 |
MS.gene34801.t1 | AT4G10400 | 26.757 | 441 | 267 | 15 | 9 | 427 | 2 | 408 | 1.78e-22 | 99.4 |
MS.gene34801.t1 | AT4G10400 | 26.757 | 441 | 267 | 15 | 9 | 427 | 2 | 408 | 1.78e-22 | 99.4 |
MS.gene34801.t1 | AT4G26340 | 28.731 | 449 | 260 | 22 | 9 | 428 | 2 | 419 | 4.16e-21 | 95.5 |
MS.gene34801.t1 | AT3G50710 | 26.813 | 455 | 269 | 21 | 9 | 428 | 2 | 427 | 7.97e-20 | 91.7 |
MS.gene34801.t1 | AT5G56820 | 28.348 | 448 | 257 | 20 | 6 | 425 | 12 | 423 | 9.48e-20 | 91.3 |
MS.gene34801.t1 | AT4G13965 | 26.696 | 457 | 263 | 19 | 2 | 425 | 3 | 420 | 1.37e-19 | 90.9 |
MS.gene34801.t1 | AT5G56560 | 26.517 | 445 | 269 | 21 | 10 | 428 | 6 | 418 | 1.45e-19 | 90.9 |
MS.gene34801.t1 | AT1G78750 | 25.328 | 458 | 295 | 17 | 2 | 425 | 11 | 455 | 3.99e-18 | 86.7 |
MS.gene34801.t1 | AT1G78750 | 25.328 | 458 | 295 | 17 | 2 | 425 | 11 | 455 | 3.99e-18 | 86.7 |
MS.gene34801.t1 | AT5G56400 | 26.233 | 446 | 290 | 15 | 4 | 428 | 28 | 455 | 4.76e-18 | 86.7 |
MS.gene34801.t1 | AT2G26030 | 24.464 | 466 | 277 | 19 | 9 | 425 | 4 | 443 | 6.67e-18 | 85.9 |
MS.gene34801.t1 | AT5G56440 | 26.432 | 454 | 273 | 19 | 9 | 427 | 2 | 429 | 7.97e-18 | 85.5 |
MS.gene34801.t1 | AT3G52680 | 28.540 | 452 | 274 | 17 | 7 | 430 | 19 | 449 | 1.11e-17 | 85.5 |
MS.gene34801.t1 | AT3G59200 | 36.000 | 200 | 100 | 10 | 8 | 191 | 6 | 193 | 2.70e-17 | 83.6 |
MS.gene34801.t1 | AT3G59200 | 35.678 | 199 | 104 | 10 | 7 | 191 | 5 | 193 | 4.23e-17 | 84.0 |
MS.gene34801.t1 | AT3G42770 | 26.316 | 437 | 275 | 16 | 11 | 420 | 1 | 417 | 6.35e-17 | 83.2 |
MS.gene34801.t1 | AT2G26030 | 24.678 | 466 | 271 | 19 | 9 | 425 | 4 | 438 | 7.58e-17 | 82.8 |
MS.gene34801.t1 | AT2G26030 | 24.678 | 466 | 271 | 19 | 9 | 425 | 4 | 438 | 7.58e-17 | 82.8 |
MS.gene34801.t1 | AT5G50270 | 27.400 | 427 | 259 | 19 | 9 | 407 | 2 | 405 | 7.62e-17 | 82.4 |
MS.gene34801.t1 | AT1G78760 | 25.420 | 476 | 264 | 23 | 4 | 429 | 11 | 445 | 1.78e-16 | 81.6 |
MS.gene34801.t1 | AT2G04230 | 27.896 | 423 | 238 | 22 | 7 | 391 | 11 | 404 | 2.45e-16 | 81.3 |
MS.gene34801.t1 | AT4G00160 | 27.826 | 460 | 265 | 21 | 7 | 428 | 14 | 444 | 2.45e-16 | 81.3 |
MS.gene34801.t1 | AT5G22660 | 26.471 | 476 | 260 | 22 | 2 | 425 | 6 | 443 | 3.81e-16 | 80.5 |
MS.gene34801.t1 | AT5G56370 | 26.174 | 447 | 274 | 15 | 9 | 427 | 2 | 420 | 7.59e-16 | 79.7 |
MS.gene34801.t1 | AT5G56370 | 26.174 | 447 | 274 | 15 | 9 | 427 | 2 | 420 | 7.59e-16 | 79.7 |
MS.gene34801.t1 | AT4G26350 | 26.201 | 458 | 269 | 22 | 9 | 428 | 2 | 428 | 1.14e-15 | 79.0 |
MS.gene34801.t1 | AT3G60040 | 26.077 | 441 | 268 | 19 | 8 | 412 | 12 | 430 | 1.28e-15 | 79.7 |
MS.gene34801.t1 | AT5G22610 | 23.991 | 446 | 284 | 15 | 8 | 426 | 17 | 434 | 1.78e-15 | 78.6 |
MS.gene34801.t1 | AT5G53635 | 26.503 | 449 | 273 | 15 | 11 | 427 | 2 | 425 | 2.79e-15 | 77.8 |
MS.gene34801.t1 | AT3G60040 | 25.734 | 443 | 267 | 18 | 8 | 412 | 231 | 649 | 2.81e-15 | 78.6 |
MS.gene34801.t1 | AT1G66290 | 26.049 | 453 | 268 | 22 | 9 | 425 | 29 | 450 | 2.87e-15 | 77.8 |
MS.gene34801.t1 | AT3G60040 | 25.734 | 443 | 267 | 18 | 8 | 412 | 229 | 647 | 3.32e-15 | 78.2 |
MS.gene34801.t1 | AT3G60040 | 25.734 | 443 | 267 | 18 | 8 | 412 | 232 | 650 | 3.32e-15 | 78.6 |
MS.gene34801.t1 | AT3G60040 | 25.734 | 443 | 267 | 18 | 8 | 412 | 231 | 649 | 3.38e-15 | 78.6 |
MS.gene34801.t1 | AT3G59230 | 31.500 | 200 | 116 | 5 | 8 | 191 | 11 | 205 | 6.66e-15 | 77.0 |
MS.gene34801.t1 | AT4G14103 | 31.472 | 197 | 115 | 6 | 6 | 191 | 5 | 192 | 1.60e-14 | 75.1 |
MS.gene34801.t1 | AT4G14103 | 31.472 | 197 | 115 | 6 | 6 | 191 | 5 | 192 | 1.60e-14 | 75.1 |
MS.gene34801.t1 | AT1G66310 | 27.876 | 452 | 260 | 23 | 9 | 425 | 19 | 439 | 1.86e-14 | 75.5 |
MS.gene34801.t1 | AT4G14103 | 31.472 | 197 | 115 | 6 | 6 | 191 | 5 | 192 | 1.92e-14 | 75.5 |
MS.gene34801.t1 | AT1G32375 | 32.407 | 216 | 120 | 10 | 9 | 212 | 2 | 203 | 3.42e-14 | 74.3 |
MS.gene34801.t1 | AT1G32375 | 32.407 | 216 | 120 | 10 | 9 | 212 | 2 | 203 | 3.42e-14 | 74.3 |
MS.gene34801.t1 | AT5G22720 | 23.690 | 477 | 279 | 18 | 5 | 427 | 19 | 464 | 5.43e-14 | 73.9 |
MS.gene34801.t1 | AT3G49030 | 26.490 | 453 | 278 | 20 | 3 | 427 | 15 | 440 | 6.46e-14 | 73.9 |
MS.gene34801.t1 | AT4G09920 | 29.843 | 191 | 116 | 7 | 9 | 191 | 2 | 182 | 7.03e-14 | 72.8 |
MS.gene34801.t1 | AT4G09920 | 29.843 | 191 | 116 | 7 | 9 | 191 | 2 | 182 | 7.03e-14 | 72.8 |
MS.gene34801.t1 | AT4G09920 | 29.534 | 193 | 114 | 7 | 9 | 191 | 2 | 182 | 7.91e-14 | 72.0 |
MS.gene34801.t1 | AT4G09920 | 29.534 | 193 | 114 | 7 | 9 | 191 | 2 | 182 | 7.91e-14 | 72.0 |
MS.gene34801.t1 | AT4G09920 | 29.534 | 193 | 114 | 7 | 9 | 191 | 2 | 182 | 7.91e-14 | 72.0 |
MS.gene34801.t1 | AT3G26930 | 29.258 | 458 | 257 | 22 | 6 | 428 | 18 | 443 | 8.15e-14 | 73.6 |
MS.gene34801.t1 | AT2G26860 | 26.139 | 417 | 250 | 15 | 9 | 392 | 2 | 393 | 2.17e-13 | 72.0 |
MS.gene34801.t1 | AT2G26860 | 26.139 | 417 | 250 | 15 | 9 | 392 | 2 | 393 | 2.17e-13 | 72.0 |
MS.gene34801.t1 | AT1G16930 | 25.257 | 487 | 261 | 24 | 1 | 428 | 7 | 449 | 2.42e-13 | 72.0 |
MS.gene34801.t1 | AT1G16930 | 25.257 | 487 | 261 | 24 | 1 | 428 | 7 | 449 | 2.42e-13 | 72.0 |
MS.gene34801.t1 | AT1G16930 | 25.257 | 487 | 261 | 24 | 1 | 428 | 7 | 449 | 2.42e-13 | 72.0 |
MS.gene34801.t1 | AT5G53640 | 31.507 | 219 | 99 | 10 | 1 | 191 | 1 | 196 | 3.94e-13 | 68.9 |
MS.gene34801.t1 | AT5G38590 | 24.201 | 438 | 261 | 18 | 9 | 413 | 2 | 401 | 4.36e-13 | 70.9 |
MS.gene34801.t1 | AT3G49030 | 26.000 | 450 | 258 | 21 | 3 | 427 | 15 | 414 | 4.90e-13 | 70.9 |
MS.gene34801.t1 | AT3G51530 | 25.882 | 425 | 257 | 17 | 4 | 398 | 22 | 418 | 8.01e-13 | 70.5 |
MS.gene34801.t1 | AT3G52680 | 33.668 | 199 | 108 | 7 | 7 | 194 | 19 | 204 | 1.37e-12 | 69.3 |
MS.gene34801.t1 | AT5G60610 | 26.150 | 413 | 245 | 18 | 9 | 392 | 2 | 383 | 1.50e-12 | 69.3 |
MS.gene34801.t1 | AT5G60610 | 26.150 | 413 | 245 | 18 | 9 | 392 | 2 | 383 | 1.50e-12 | 69.3 |
MS.gene34801.t1 | AT4G13985 | 24.895 | 478 | 258 | 20 | 9 | 425 | 19 | 456 | 1.94e-12 | 69.3 |
MS.gene34801.t1 | AT4G14096 | 30.729 | 192 | 117 | 7 | 8 | 191 | 7 | 190 | 7.90e-12 | 67.4 |
MS.gene34801.t1 | AT4G14096 | 30.729 | 192 | 117 | 7 | 8 | 191 | 7 | 190 | 7.90e-12 | 67.4 |
MS.gene34801.t1 | AT3G59190 | 32.039 | 206 | 114 | 11 | 3 | 191 | 5 | 201 | 8.70e-12 | 67.0 |
MS.gene34801.t1 | AT3G59190 | 32.039 | 206 | 114 | 11 | 3 | 191 | 5 | 201 | 1.05e-11 | 67.0 |
MS.gene34801.t1 | AT5G41630 | 32.536 | 209 | 116 | 11 | 1 | 191 | 4 | 205 | 1.55e-11 | 66.2 |
MS.gene34801.t1 | AT1G06630 | 25.278 | 360 | 219 | 14 | 8 | 335 | 11 | 352 | 2.30e-11 | 65.9 |
MS.gene34801.t1 | AT1G06630 | 25.278 | 360 | 219 | 14 | 8 | 335 | 11 | 352 | 2.30e-11 | 65.9 |
MS.gene34801.t1 | AT1G06630 | 25.278 | 360 | 219 | 14 | 8 | 335 | 11 | 352 | 2.30e-11 | 65.9 |
MS.gene34801.t1 | AT1G06630 | 25.278 | 360 | 219 | 14 | 8 | 335 | 11 | 352 | 2.30e-11 | 65.9 |
MS.gene34801.t1 | AT1G06630 | 25.278 | 360 | 219 | 14 | 8 | 335 | 11 | 352 | 2.46e-11 | 65.5 |
MS.gene34801.t1 | AT1G06630 | 25.278 | 360 | 219 | 14 | 8 | 335 | 11 | 352 | 2.46e-11 | 65.5 |
MS.gene34801.t1 | AT3G26922 | 33.166 | 199 | 105 | 9 | 8 | 194 | 13 | 195 | 2.62e-11 | 64.7 |
MS.gene34801.t1 | AT3G26922 | 33.166 | 199 | 105 | 9 | 8 | 194 | 13 | 195 | 2.62e-11 | 64.7 |
MS.gene34801.t1 | AT1G06630 | 25.278 | 360 | 219 | 14 | 8 | 335 | 20 | 361 | 3.46e-11 | 65.1 |
MS.gene34801.t1 | AT3G59170 | 30.909 | 220 | 116 | 9 | 7 | 193 | 5 | 221 | 3.68e-11 | 65.5 |
MS.gene34801.t1 | AT3G58940 | 31.868 | 182 | 97 | 8 | 9 | 171 | 2 | 175 | 4.20e-11 | 65.5 |
MS.gene34801.t1 | AT3G58940 | 31.868 | 182 | 97 | 8 | 9 | 171 | 2 | 175 | 4.20e-11 | 65.5 |
MS.gene34801.t1 | AT1G06630 | 28.205 | 195 | 126 | 5 | 8 | 191 | 11 | 202 | 4.23e-11 | 64.3 |
MS.gene34801.t1 | AT1G06630 | 25.278 | 360 | 219 | 14 | 8 | 335 | 11 | 352 | 4.72e-11 | 65.1 |
MS.gene34801.t1 | AT1G58310 | 29.954 | 217 | 109 | 8 | 7 | 192 | 6 | 210 | 5.48e-11 | 64.7 |
MS.gene34801.t1 | AT1G66320 | 25.490 | 459 | 256 | 22 | 14 | 425 | 35 | 454 | 7.10e-11 | 64.3 |
Find 106 sgRNAs with CRISPR-Local
Find 123 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GACCCAGCCGTCTCTCTTTA+AGG | 0.096468 | 8.3:+40119072 | MS.gene34801:CDS |
TCCGGCTGCCATGTTCTTAA+AGG | 0.277720 | 8.3:-40118817 | None:intergenic |
TGATATTTCCAGTTACATTA+AGG | 0.290409 | 8.3:-40118267 | None:intergenic |
CATTGGCCATTTCCACAGTA+TGG | 0.333347 | 8.3:+40118300 | MS.gene34801:CDS |
TCGACAAATTCGCTTTCAAC+TGG | 0.344429 | 8.3:-40118349 | None:intergenic |
TGTAACTGGAAATATCAAAT+TGG | 0.358240 | 8.3:+40118273 | MS.gene34801:CDS |
AGAAGTTTGGTGACATAGTC+TGG | 0.364604 | 8.3:-40118175 | None:intergenic |
CAGGACATTCGAGTTGAAAC+AGG | 0.370609 | 8.3:-40118603 | None:intergenic |
CTCGGAGGTGTTTGAGAATA+GGG | 0.373089 | 8.3:-40118372 | None:intergenic |
ACTCTCTGGCTGCCCCGGTC+TGG | 0.378377 | 8.3:+40118120 | MS.gene34801:CDS |
CTCGCCGGTGGCGTTATCTC+TGG | 0.383892 | 8.3:+40117595 | MS.gene34801:CDS |
CTGTGGATCCTTGCTGCCAC+TGG | 0.389738 | 8.3:+40117807 | MS.gene34801:CDS |
TTCGTGTCATTCAACATCTA+AGG | 0.391135 | 8.3:+40118420 | MS.gene34801:CDS |
ACCGGGGCAGCCAGAGAGTA+AGG | 0.393311 | 8.3:-40118116 | None:intergenic |
TGGAGTTACCTTAATGTAAC+TGG | 0.395592 | 8.3:+40118259 | MS.gene34801:CDS |
AGGTGGGATTTGAGACATTC+AGG | 0.399944 | 8.3:-40118853 | None:intergenic |
TTTGAATGTCGCGGGATTTG+CGG | 0.402806 | 8.3:-40117725 | None:intergenic |
CTTCCACCATACTGTGGAAA+TGG | 0.406312 | 8.3:-40118306 | None:intergenic |
TCAGAAGTTGCCTTACTCTC+TGG | 0.409070 | 8.3:+40118106 | MS.gene34801:CDS |
ACTATGGCACGACGGAAATC+AGG | 0.413973 | 8.3:+40117477 | None:intergenic |
GCCTTACTCTCTGGCTGCCC+CGG | 0.418848 | 8.3:+40118115 | MS.gene34801:CDS |
GCACAAATCTTGTTTCTCTC+AGG | 0.423152 | 8.3:+40117904 | MS.gene34801:CDS |
ATATCCTTCTATGTGAATAT+AGG | 0.424387 | 8.3:-40118878 | None:intergenic |
AATATCAAATTGGCCATCAT+TGG | 0.425497 | 8.3:+40118283 | MS.gene34801:CDS |
GGATTTCGATCTCTTGGAGC+TGG | 0.432007 | 8.3:-40118212 | None:intergenic |
CTGACCTATATTCACATAGA+AGG | 0.433553 | 8.3:+40118874 | MS.gene34801:CDS |
TCTCGGAGGTGTTTGAGAAT+AGG | 0.436391 | 8.3:-40118373 | None:intergenic |
CGTCGGAGAAGTTGAAGACT+TGG | 0.448814 | 8.3:-40117626 | None:intergenic |
AGTGGTGGATTTCGATCTCT+TGG | 0.460719 | 8.3:-40118218 | None:intergenic |
TCATATACTCTTTGCGATCT+CGG | 0.462793 | 8.3:-40118390 | None:intergenic |
ATATGCAACAGGAGTGAGTC+TGG | 0.464210 | 8.3:-40117522 | None:intergenic |
CTGCCCCGGTCTGGAAACTT+TGG | 0.467080 | 8.3:+40118129 | MS.gene34801:CDS |
ATATATAATCTCTTCAATGA+TGG | 0.467974 | 8.3:-40118064 | None:intergenic |
TGGGTCAAATTTAAGTTGGC+AGG | 0.480559 | 8.3:-40119055 | None:intergenic |
GGAAGGTGGAATGAGAAGTT+TGG | 0.482287 | 8.3:-40118188 | None:intergenic |
TGAAGTAAATTGCGAAACTC+TGG | 0.482988 | 8.3:-40118563 | None:intergenic |
GGAAGGACATGATATGCAAC+AGG | 0.493505 | 8.3:-40117533 | None:intergenic |
CGGCTGGGTCAAATTTAAGT+TGG | 0.494896 | 8.3:-40119059 | None:intergenic |
CTCACTATCACCAACCCATT+CGG | 0.495214 | 8.3:+40117756 | MS.gene34801:CDS |
CTTCTATGTGAATATAGGTC+AGG | 0.500493 | 8.3:-40118873 | None:intergenic |
CGACAAATTCGCTTTCAACT+GGG | 0.505565 | 8.3:-40118348 | None:intergenic |
TCTCATAATTCAAAGCAAGA+AGG | 0.505625 | 8.3:+40118661 | MS.gene34801:CDS |
GATCTCTTGGAGCTGGAGGA+AGG | 0.507584 | 8.3:-40118205 | None:intergenic |
GAAAGGAGGGAGGGTTATTG+CGG | 0.510199 | 8.3:-40117868 | None:intergenic |
CGGTGAGAGAGAGTTCTTGA+AGG | 0.511886 | 8.3:-40117836 | None:intergenic |
GGTTATTGCGGAGTCCTTGA+CGG | 0.512266 | 8.3:-40117856 | None:intergenic |
ATTCACATAGAAGGATATCA+AGG | 0.515119 | 8.3:+40118883 | MS.gene34801:CDS |
TTCTTGAAGGTGAGGGCCAG+TGG | 0.517112 | 8.3:-40117823 | None:intergenic |
CTGACAATTTCACCTGGAGC+TGG | 0.518959 | 8.3:+40118239 | MS.gene34801:CDS |
CTGTTTCAACTCGAATGTCC+TGG | 0.520806 | 8.3:+40118604 | MS.gene34801:CDS |
CCATCCAAAGTTTCCAGACC+GGG | 0.523685 | 8.3:-40118133 | None:intergenic |
GACGAGAGTCATCGTAGCTA+CGG | 0.525998 | 8.3:-40117571 | None:intergenic |
GAATGTCGCGGGATTTGCGG+AGG | 0.534092 | 8.3:-40117722 | None:intergenic |
GTAGAAACATGCCACCGAAT+GGG | 0.534153 | 8.3:-40117770 | None:intergenic |
GTAGCTACGGAGGTTCTAGT+AGG | 0.538342 | 8.3:-40117558 | None:intergenic |
ACCATCCAAAGTTTCCAGAC+CGG | 0.539301 | 8.3:-40118134 | None:intergenic |
CACCTTAAAGAGAGACGGCT+GGG | 0.541106 | 8.3:-40119074 | None:intergenic |
AGAGAGAGTTCTTGAAGGTG+AGG | 0.541451 | 8.3:-40117831 | None:intergenic |
CGATGACTCTCGTCTCTCGC+CGG | 0.542962 | 8.3:+40117580 | MS.gene34801:CDS |
CCCGGTCTGGAAACTTTGGA+TGG | 0.544555 | 8.3:+40118133 | MS.gene34801:CDS |
ACCTTTAAGAACATGGCAGC+CGG | 0.545276 | 8.3:+40118816 | MS.gene34801:CDS |
TCAGGAACCGTTGTTGACTC+CGG | 0.545420 | 8.3:-40118835 | None:intergenic |
ATTTCTCAAGCACGTTGACC+AGG | 0.546076 | 8.3:-40118622 | None:intergenic |
GACAAATTCGCTTTCAACTG+GGG | 0.549522 | 8.3:-40118347 | None:intergenic |
TGTAGAAACATGCCACCGAA+TGG | 0.565747 | 8.3:-40117771 | None:intergenic |
TTTCGATCTCTTGGAGCTGG+AGG | 0.565969 | 8.3:-40118209 | None:intergenic |
TCACCTTAAAGAGAGACGGC+TGG | 0.570926 | 8.3:-40119075 | None:intergenic |
CCACCACTGACAATTTCACC+TGG | 0.571233 | 8.3:+40118233 | MS.gene34801:CDS |
CTACGGAGGTTCTAGTAGGA+AGG | 0.576017 | 8.3:-40117554 | None:intergenic |
CTATGTGAATATAGGTCAGG+TGG | 0.580589 | 8.3:-40118870 | None:intergenic |
CCAGGTGAAATTGTCAGTGG+TGG | 0.585148 | 8.3:-40118233 | None:intergenic |
AAGATTAACTGATATACCAA+GGG | 0.586408 | 8.3:+40119023 | MS.gene34801:CDS |
ATTAAGGTAACTCCAGCTCC+AGG | 0.586794 | 8.3:-40118251 | None:intergenic |
GAGAGAGTTCTTGAAGGTGA+GGG | 0.588776 | 8.3:-40117830 | None:intergenic |
CCGGTGGCGTTATCTCTGGA+AGG | 0.590496 | 8.3:+40117599 | MS.gene34801:CDS |
TGGCCATTTCCACAGTATGG+TGG | 0.597988 | 8.3:+40118303 | MS.gene34801:CDS |
TACACGACTGTGTTCAACTG+TGG | 0.605228 | 8.3:+40117790 | MS.gene34801:CDS |
AACTATCACCTTTAAGAACA+TGG | 0.605685 | 8.3:+40118809 | MS.gene34801:CDS |
TTTGTAACATAGCGACTCGT+CGG | 0.610095 | 8.3:-40117643 | None:intergenic |
ACTGTGGAAATGGCCAATGA+TGG | 0.610943 | 8.3:-40118296 | None:intergenic |
TGGCAGGTGACAGAGCCCCT+TGG | 0.611510 | 8.3:-40119039 | None:intergenic |
AAAGATTAACTGATATACCA+AGG | 0.612225 | 8.3:+40119022 | MS.gene34801:CDS |
TTTAGAACAGTGGCATGAAG+TGG | 0.614365 | 8.3:-40118536 | None:intergenic |
CTCTTGGAGCTGGAGGAAGG+TGG | 0.615652 | 8.3:-40118202 | None:intergenic |
GGTGAGGGCCAGTGGCAGCA+AGG | 0.616020 | 8.3:-40117815 | None:intergenic |
TGACTCTCGTCTCTCGCCGG+TGG | 0.621406 | 8.3:+40117583 | MS.gene34801:CDS |
AATGTCGCGGGATTTGCGGA+GGG | 0.621780 | 8.3:-40117721 | None:intergenic |
AGAACTCTCTCTCACCGTCA+AGG | 0.624267 | 8.3:+40117842 | MS.gene34801:CDS |
GGAGGTTCTAGTAGGAAGGA+AGG | 0.628714 | 8.3:-40117550 | None:intergenic |
AAACATGCCACCGAATGGGT+TGG | 0.634674 | 8.3:-40117766 | None:intergenic |
ACTATCACCAACCCATTCGG+TGG | 0.634952 | 8.3:+40117759 | MS.gene34801:CDS |
GTTTGGTGACATAGTCTGGA+GGG | 0.638914 | 8.3:-40118171 | None:intergenic |
TATGTGAATATAGGTCAGGT+GGG | 0.640734 | 8.3:-40118869 | None:intergenic |
CTCTGGATAGTTTAGAACAG+TGG | 0.647378 | 8.3:-40118546 | None:intergenic |
CCTTCCAGAGATAACGCCAC+CGG | 0.649705 | 8.3:-40117599 | None:intergenic |
GAAATGCTTCCACCATACTG+TGG | 0.660794 | 8.3:-40118312 | None:intergenic |
AAGAGATTATATATCGACGT+AGG | 0.665926 | 8.3:+40118073 | MS.gene34801:CDS |
AGGACATTCGAGTTGAAACA+GGG | 0.672325 | 8.3:-40118602 | None:intergenic |
GCTCCAGGTGAAATTGTCAG+TGG | 0.674603 | 8.3:-40118236 | None:intergenic |
TATACTCTTTGCGATCTCGG+AGG | 0.680932 | 8.3:-40118387 | None:intergenic |
AGTTTGGTGACATAGTCTGG+AGG | 0.688870 | 8.3:-40118172 | None:intergenic |
TTATGAGAACTTGAAGCATG+TGG | 0.695487 | 8.3:-40118646 | None:intergenic |
CATCCAAAGTTTCCAGACCG+GGG | 0.699918 | 8.3:-40118132 | None:intergenic |
ATGGCAGCCGGAGTCAACAA+CGG | 0.700697 | 8.3:+40118828 | MS.gene34801:CDS |
GAGAGTCATCGTAGCTACGG+AGG | 0.707835 | 8.3:-40117568 | None:intergenic |
AGATTAACTGATATACCAAG+GGG | 0.725053 | 8.3:+40119024 | MS.gene34801:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AGTTTAATTAAATCAATTTT+TGG | + | chr8.3:40118699-40118718 | MS.gene34801:intron | 10.0% |
!!! | ACACAAAAATATATTTTTGA+GGG | + | chr8.3:40118759-40118778 | MS.gene34801:intron | 15.0% |
!!! | AGATATTACAATTTTCTTTT+TGG | - | chr8.3:40117940-40117959 | None:intergenic | 15.0% |
!!! | TACACAAAAATATATTTTTG+AGG | + | chr8.3:40118758-40118777 | MS.gene34801:intron | 15.0% |
!! | AATTGATTAAAAAGAAAGGA+GGG | - | chr8.3:40117884-40117903 | None:intergenic | 20.0% |
!! | ATATATAATCTCTTCAATGA+TGG | - | chr8.3:40118067-40118086 | None:intergenic | 20.0% |
!!! | AAGGTGAAGTTTTATTTTTA+TGG | + | chr8.3:40118439-40118458 | MS.gene34801:intron | 20.0% |
! | AAAGATTAACTGATATACCA+AGG | + | chr8.3:40119022-40119041 | MS.gene34801:CDS | 25.0% |
! | AAGATTAACTGATATACCAA+GGG | + | chr8.3:40119023-40119042 | MS.gene34801:CDS | 25.0% |
! | ATATCCTTCTATGTGAATAT+AGG | - | chr8.3:40118881-40118900 | None:intergenic | 25.0% |
! | CAATTGATTAAAAAGAAAGG+AGG | - | chr8.3:40117885-40117904 | None:intergenic | 25.0% |
! | GTGCAATTGATTAAAAAGAA+AGG | - | chr8.3:40117888-40117907 | None:intergenic | 25.0% |
! | TGATATTTCCAGTTACATTA+AGG | - | chr8.3:40118270-40118289 | None:intergenic | 25.0% |
! | TGTAACTGGAAATATCAAAT+TGG | + | chr8.3:40118273-40118292 | MS.gene34801:CDS | 25.0% |
AAGAGATTATATATCGACGT+AGG | + | chr8.3:40118073-40118092 | MS.gene34801:CDS | 30.0% | |
AATATCAAATTGGCCATCAT+TGG | + | chr8.3:40118283-40118302 | MS.gene34801:CDS | 30.0% | |
AGATTAACTGATATACCAAG+GGG | + | chr8.3:40119024-40119043 | MS.gene34801:CDS | 30.0% | |
ATTCACATAGAAGGATATCA+AGG | + | chr8.3:40118883-40118902 | MS.gene34801:CDS | 30.0% | |
TACATGATAACAACAAGTGA+TGG | - | chr8.3:40118506-40118525 | None:intergenic | 30.0% | |
TCTCATAATTCAAAGCAAGA+AGG | + | chr8.3:40118661-40118680 | MS.gene34801:CDS | 30.0% | |
! | AACTATCACCTTTAAGAACA+TGG | + | chr8.3:40118809-40118828 | MS.gene34801:CDS | 30.0% |
!! | CATTTGCTGAATATCTTTTG+AGG | + | chr8.3:40118923-40118942 | MS.gene34801:CDS | 30.0% |
CTGACCTATATTCACATAGA+AGG | + | chr8.3:40118874-40118893 | MS.gene34801:CDS | 35.0% | |
CTTCTATGTGAATATAGGTC+AGG | - | chr8.3:40118876-40118895 | None:intergenic | 35.0% | |
GATTAAAAAGAAAGGAGGGA+GGG | - | chr8.3:40117880-40117899 | None:intergenic | 35.0% | |
TATGTGAATATAGGTCAGGT+GGG | - | chr8.3:40118872-40118891 | None:intergenic | 35.0% | |
TCATATACTCTTTGCGATCT+CGG | - | chr8.3:40118393-40118412 | None:intergenic | 35.0% | |
TGAAGTAAATTGCGAAACTC+TGG | - | chr8.3:40118566-40118585 | None:intergenic | 35.0% | |
TGATTAAAAAGAAAGGAGGG+AGG | - | chr8.3:40117881-40117900 | None:intergenic | 35.0% | |
TGGAGTTACCTTAATGTAAC+TGG | + | chr8.3:40118259-40118278 | MS.gene34801:CDS | 35.0% | |
TTATGAGAACTTGAAGCATG+TGG | - | chr8.3:40118649-40118668 | None:intergenic | 35.0% | |
! | ATTGAACTTTTGAATGTCGC+GGG | - | chr8.3:40117736-40117755 | None:intergenic | 35.0% |
! | GATTGAACTTTTGAATGTCG+CGG | - | chr8.3:40117737-40117756 | None:intergenic | 35.0% |
! | TTCGTGTCATTCAACATCTA+AGG | + | chr8.3:40118420-40118439 | MS.gene34801:CDS | 35.0% |
!! | GCTGAATATCTTTTGAGGAA+CGG | + | chr8.3:40118928-40118947 | MS.gene34801:CDS | 35.0% |
!!! | GGTGTTTTGAAAAGACAAAC+AGG | - | chr8.3:40118000-40118019 | None:intergenic | 35.0% |
CGACAAATTCGCTTTCAACT+GGG | - | chr8.3:40118351-40118370 | None:intergenic | 40.0% | |
CTATGTGAATATAGGTCAGG+TGG | - | chr8.3:40118873-40118892 | None:intergenic | 40.0% | |
GACAAATTCGCTTTCAACTG+GGG | - | chr8.3:40118350-40118369 | None:intergenic | 40.0% | |
TCGACAAATTCGCTTTCAAC+TGG | - | chr8.3:40118352-40118371 | None:intergenic | 40.0% | |
TTTGTAACATAGCGACTCGT+CGG | - | chr8.3:40117646-40117665 | None:intergenic | 40.0% | |
! | AGAAGTTTGGTGACATAGTC+TGG | - | chr8.3:40118178-40118197 | None:intergenic | 40.0% |
! | CTCTGGATAGTTTAGAACAG+TGG | - | chr8.3:40118549-40118568 | None:intergenic | 40.0% |
! | GCACAAATCTTGTTTCTCTC+AGG | + | chr8.3:40117904-40117923 | MS.gene34801:CDS | 40.0% |
! | TTTAGAACAGTGGCATGAAG+TGG | - | chr8.3:40118539-40118558 | None:intergenic | 40.0% |
!! | AGGACATTCGAGTTGAAACA+GGG | - | chr8.3:40118605-40118624 | None:intergenic | 40.0% |
!! | TGGGTCAAATTTAAGTTGGC+AGG | - | chr8.3:40119058-40119077 | None:intergenic | 40.0% |
!! | TGTTGTCTCTTGTTGTTGGT+AGG | + | chr8.3:40118783-40118802 | MS.gene34801:intron | 40.0% |
ACCATCCAAAGTTTCCAGAC+CGG | - | chr8.3:40118137-40118156 | None:intergenic | 45.0% | |
ACTGTGGAAATGGCCAATGA+TGG | - | chr8.3:40118299-40118318 | None:intergenic | 45.0% | |
AGAGAGAGTTCTTGAAGGTG+AGG | - | chr8.3:40117834-40117853 | None:intergenic | 45.0% | |
ATATGCAACAGGAGTGAGTC+TGG | - | chr8.3:40117525-40117544 | None:intergenic | 45.0% | |
ATTAAGGTAACTCCAGCTCC+AGG | - | chr8.3:40118254-40118273 | None:intergenic | 45.0% | |
ATTTCTCAAGCACGTTGACC+AGG | - | chr8.3:40118625-40118644 | None:intergenic | 45.0% | |
CATTGGCCATTTCCACAGTA+TGG | + | chr8.3:40118300-40118319 | MS.gene34801:CDS | 45.0% | |
CGGCTGGGTCAAATTTAAGT+TGG | - | chr8.3:40119062-40119081 | None:intergenic | 45.0% | |
CTCACTATCACCAACCCATT+CGG | + | chr8.3:40117756-40117775 | MS.gene34801:CDS | 45.0% | |
CTGTTTCAACTCGAATGTCC+TGG | + | chr8.3:40118604-40118623 | MS.gene34801:CDS | 45.0% | |
CTTCCACCATACTGTGGAAA+TGG | - | chr8.3:40118309-40118328 | None:intergenic | 45.0% | |
GAAATGCTTCCACCATACTG+TGG | - | chr8.3:40118315-40118334 | None:intergenic | 45.0% | |
GAACTTCACACTCAAGTCTG+TGG | - | chr8.3:40118021-40118040 | None:intergenic | 45.0% | |
GAGAGAGTTCTTGAAGGTGA+GGG | - | chr8.3:40117833-40117852 | None:intergenic | 45.0% | |
GGAAGGACATGATATGCAAC+AGG | - | chr8.3:40117536-40117555 | None:intergenic | 45.0% | |
GGAAGGTGGAATGAGAAGTT+TGG | - | chr8.3:40118191-40118210 | None:intergenic | 45.0% | |
GTAGAAACATGCCACCGAAT+GGG | - | chr8.3:40117773-40117792 | None:intergenic | 45.0% | |
TACACGACTGTGTTCAACTG+TGG | + | chr8.3:40117790-40117809 | MS.gene34801:CDS | 45.0% | |
TATACTCTTTGCGATCTCGG+AGG | - | chr8.3:40118390-40118409 | None:intergenic | 45.0% | |
TCAGAAGTTGCCTTACTCTC+TGG | + | chr8.3:40118106-40118125 | MS.gene34801:CDS | 45.0% | |
TGTAGAAACATGCCACCGAA+TGG | - | chr8.3:40117774-40117793 | None:intergenic | 45.0% | |
TTTGAATGTCGCGGGATTTG+CGG | - | chr8.3:40117728-40117747 | None:intergenic | 45.0% | |
! | ACCTTTAAGAACATGGCAGC+CGG | + | chr8.3:40118816-40118835 | MS.gene34801:CDS | 45.0% |
! | AGGTGGGATTTGAGACATTC+AGG | - | chr8.3:40118856-40118875 | None:intergenic | 45.0% |
! | AGTTTGGTGACATAGTCTGG+AGG | - | chr8.3:40118175-40118194 | None:intergenic | 45.0% |
! | GGGATGTTGTCTCTTGTTGT+TGG | + | chr8.3:40118779-40118798 | MS.gene34801:intron | 45.0% |
! | GTTTGGTGACATAGTCTGGA+GGG | - | chr8.3:40118174-40118193 | None:intergenic | 45.0% |
!! | AGTGGTGGATTTCGATCTCT+TGG | - | chr8.3:40118221-40118240 | None:intergenic | 45.0% |
!! | CAGGACATTCGAGTTGAAAC+AGG | - | chr8.3:40118606-40118625 | None:intergenic | 45.0% |
!! | CTCGGAGGTGTTTGAGAATA+GGG | - | chr8.3:40118375-40118394 | None:intergenic | 45.0% |
!! | TCTCGGAGGTGTTTGAGAAT+AGG | - | chr8.3:40118376-40118395 | None:intergenic | 45.0% |
!! | TGTCTCTTGTTGTTGGTAGG+AGG | + | chr8.3:40118786-40118805 | MS.gene34801:intron | 45.0% |
AAACATGCCACCGAATGGGT+TGG | - | chr8.3:40117769-40117788 | None:intergenic | 50.0% | |
ACTATCACCAACCCATTCGG+TGG | + | chr8.3:40117759-40117778 | MS.gene34801:CDS | 50.0% | |
AGAACTCTCTCTCACCGTCA+AGG | + | chr8.3:40117842-40117861 | MS.gene34801:CDS | 50.0% | |
CATCCAAAGTTTCCAGACCG+GGG | - | chr8.3:40118135-40118154 | None:intergenic | 50.0% | |
CCACCACTGACAATTTCACC+TGG | + | chr8.3:40118233-40118252 | MS.gene34801:CDS | 50.0% | |
CCAGGTGAAATTGTCAGTGG+TGG | - | chr8.3:40118236-40118255 | None:intergenic | 50.0% | |
CCATCCAAAGTTTCCAGACC+GGG | - | chr8.3:40118136-40118155 | None:intergenic | 50.0% | |
CGGTGAGAGAGAGTTCTTGA+AGG | - | chr8.3:40117839-40117858 | None:intergenic | 50.0% | |
CGTCGGAGAAGTTGAAGACT+TGG | - | chr8.3:40117629-40117648 | None:intergenic | 50.0% | |
CTGACAATTTCACCTGGAGC+TGG | + | chr8.3:40118239-40118258 | MS.gene34801:CDS | 50.0% | |
GAAAGGAGGGAGGGTTATTG+CGG | - | chr8.3:40117871-40117890 | None:intergenic | 50.0% | |
GACGAGAGTCATCGTAGCTA+CGG | - | chr8.3:40117574-40117593 | None:intergenic | 50.0% | |
GCTCCAGGTGAAATTGTCAG+TGG | - | chr8.3:40118239-40118258 | None:intergenic | 50.0% | |
GGATTTCGATCTCTTGGAGC+TGG | - | chr8.3:40118215-40118234 | None:intergenic | 50.0% | |
GGTTATTGCGGAGTCCTTGA+CGG | - | chr8.3:40117859-40117878 | None:intergenic | 50.0% | |
TCCGGCTGCCATGTTCTTAA+AGG | - | chr8.3:40118820-40118839 | None:intergenic | 50.0% | |
TGGCCATTTCCACAGTATGG+TGG | + | chr8.3:40118303-40118322 | MS.gene34801:CDS | 50.0% | |
TTTCGATCTCTTGGAGCTGG+AGG | - | chr8.3:40118212-40118231 | None:intergenic | 50.0% | |
! | CTACGGAGGTTCTAGTAGGA+AGG | - | chr8.3:40117557-40117576 | None:intergenic | 50.0% |
! | GGAGGTTCTAGTAGGAAGGA+AGG | - | chr8.3:40117553-40117572 | None:intergenic | 50.0% |
! | GTAGCTACGGAGGTTCTAGT+AGG | - | chr8.3:40117561-40117580 | None:intergenic | 50.0% |
!! | TCAGGAACCGTTGTTGACTC+CGG | - | chr8.3:40118838-40118857 | None:intergenic | 50.0% |
AATGTCGCGGGATTTGCGGA+GGG | - | chr8.3:40117724-40117743 | None:intergenic | 55.0% | |
ATGGCAGCCGGAGTCAACAA+CGG | + | chr8.3:40118828-40118847 | MS.gene34801:CDS | 55.0% | |
CCCGGTCTGGAAACTTTGGA+TGG | + | chr8.3:40118133-40118152 | MS.gene34801:CDS | 55.0% | |
CCTTCCAGAGATAACGCCAC+CGG | - | chr8.3:40117602-40117621 | None:intergenic | 55.0% | |
GAGAGTCATCGTAGCTACGG+AGG | - | chr8.3:40117571-40117590 | None:intergenic | 55.0% | |
GATCTCTTGGAGCTGGAGGA+AGG | - | chr8.3:40118208-40118227 | None:intergenic | 55.0% | |
TTCTTGAAGGTGAGGGCCAG+TGG | - | chr8.3:40117826-40117845 | None:intergenic | 55.0% | |
CAGTGGCATGAAGTGGCGAC+TGG | - | chr8.3:40118532-40118551 | None:intergenic | 60.0% | |
CCGGTGGCGTTATCTCTGGA+AGG | + | chr8.3:40117599-40117618 | MS.gene34801:CDS | 60.0% | |
CGATGACTCTCGTCTCTCGC+CGG | + | chr8.3:40117580-40117599 | MS.gene34801:CDS | 60.0% | |
CTCTTGGAGCTGGAGGAAGG+TGG | - | chr8.3:40118205-40118224 | None:intergenic | 60.0% | |
CTGCCCCGGTCTGGAAACTT+TGG | + | chr8.3:40118129-40118148 | MS.gene34801:CDS | 60.0% | |
CTGTGGATCCTTGCTGCCAC+TGG | + | chr8.3:40117807-40117826 | MS.gene34801:CDS | 60.0% | |
GAATGTCGCGGGATTTGCGG+AGG | - | chr8.3:40117725-40117744 | None:intergenic | 60.0% | |
ACCGGGGCAGCCAGAGAGTA+AGG | - | chr8.3:40118119-40118138 | None:intergenic | 65.0% | |
CTCGCCGGTGGCGTTATCTC+TGG | + | chr8.3:40117595-40117614 | MS.gene34801:CDS | 65.0% | |
GCCTTACTCTCTGGCTGCCC+CGG | + | chr8.3:40118115-40118134 | MS.gene34801:CDS | 65.0% | |
TGACTCTCGTCTCTCGCCGG+TGG | + | chr8.3:40117583-40117602 | MS.gene34801:CDS | 65.0% | |
TGGCAGGTGACAGAGCCCCT+TGG | - | chr8.3:40119042-40119061 | None:intergenic | 65.0% | |
ACTCTCTGGCTGCCCCGGTC+TGG | + | chr8.3:40118120-40118139 | MS.gene34801:CDS | 70.0% | |
GGTGAGGGCCAGTGGCAGCA+AGG | - | chr8.3:40117818-40117837 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 40117480 | 40119092 | 40117480 | ID=MS.gene34801 |
chr8.3 | mRNA | 40117480 | 40119092 | 40117480 | ID=MS.gene34801.t1;Parent=MS.gene34801 |
chr8.3 | exon | 40117480 | 40117925 | 40117480 | ID=MS.gene34801.t1.exon1;Parent=MS.gene34801.t1 |
chr8.3 | CDS | 40117480 | 40117925 | 40117480 | ID=cds.MS.gene34801.t1;Parent=MS.gene34801.t1 |
chr8.3 | exon | 40118024 | 40118441 | 40118024 | ID=MS.gene34801.t1.exon2;Parent=MS.gene34801.t1 |
chr8.3 | CDS | 40118024 | 40118441 | 40118024 | ID=cds.MS.gene34801.t1;Parent=MS.gene34801.t1 |
chr8.3 | exon | 40118533 | 40118682 | 40118533 | ID=MS.gene34801.t1.exon3;Parent=MS.gene34801.t1 |
chr8.3 | CDS | 40118533 | 40118682 | 40118533 | ID=cds.MS.gene34801.t1;Parent=MS.gene34801.t1 |
chr8.3 | exon | 40118805 | 40119092 | 40118805 | ID=MS.gene34801.t1.exon4;Parent=MS.gene34801.t1 |
chr8.3 | CDS | 40118805 | 40119092 | 40118805 | ID=cds.MS.gene34801.t1;Parent=MS.gene34801.t1 |
Gene Sequence |
Protein sequence |