AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene34801


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34801.t1 MTR_8g062010 93.333 435 27 1 1 433 1 435 0.0 801
MS.gene34801.t1 MTR_8g070950 64.155 438 141 8 3 432 9 438 8.17e-179 506
MS.gene34801.t1 MTR_8g062080 58.036 448 159 9 1 432 15 449 2.58e-163 468
MS.gene34801.t1 MTR_8g058965 57.363 455 156 9 9 432 13 460 2.73e-162 465
MS.gene34801.t1 MTR_8g062310 57.991 438 158 8 1 432 15 432 1.48e-160 460
MS.gene34801.t1 MTR_8g469020 55.361 457 163 9 9 432 7 455 4.63e-157 452
MS.gene34801.t1 MTR_8g062300 55.603 464 158 10 9 432 26 481 4.96e-154 445
MS.gene34801.t1 MTR_4g050250 52.670 412 151 11 2 374 14 420 1.38e-123 365
MS.gene34801.t1 MTR_8g467790 50.132 379 141 9 9 372 148 493 9.42e-108 328
MS.gene34801.t1 MTR_2g083840 43.612 454 220 12 3 428 12 457 2.76e-97 299
MS.gene34801.t1 MTR_8g468810 42.198 455 218 20 6 428 22 463 3.48e-84 266
MS.gene34801.t1 MTR_8g062270 39.693 456 224 17 7 427 14 453 1.44e-79 253
MS.gene34801.t1 MTR_8g014260 40.848 448 227 18 8 428 15 451 1.53e-78 251
MS.gene34801.t1 MTR_8g058970 40.129 466 226 16 9 428 19 477 1.17e-77 249
MS.gene34801.t1 MTR_8g467800 39.597 447 230 10 9 428 20 453 1.75e-74 240
MS.gene34801.t1 MTR_5g092960 39.121 455 233 14 7 427 17 461 3.06e-72 234
MS.gene34801.t1 MTR_4g032730 37.908 459 238 13 9 427 15 466 3.64e-71 232
MS.gene34801.t1 MTR_2g086020 77.622 143 32 0 290 432 177 319 3.43e-68 219
MS.gene34801.t1 MTR_2g086020 49.333 150 59 5 35 175 1 142 4.87e-33 127
MS.gene34801.t1 MTR_8g468760 36.324 457 222 14 1 427 1 418 2.98e-64 213
MS.gene34801.t1 MTR_8g468840 38.255 447 237 13 8 426 13 448 5.06e-64 213
MS.gene34801.t1 MTR_8g445780 39.356 404 203 16 2 381 5 390 3.92e-62 206
MS.gene34801.t1 MTR_8g468810 41.598 363 169 18 6 338 22 371 3.51e-57 192
MS.gene34801.t1 MTR_8g014160 35.778 450 208 19 1 428 35 425 1.27e-56 192
MS.gene34801.t1 MTR_5g092960 38.950 362 184 11 7 338 17 371 6.67e-49 171
MS.gene34801.t1 MTR_8g468810 43.103 290 130 14 6 272 22 299 1.98e-46 163
MS.gene34801.t1 MTR_8g468810 43.103 290 130 14 6 272 22 299 2.95e-46 162
MS.gene34801.t1 MTR_8g468810 43.103 290 130 14 6 272 22 299 5.71e-46 162
MS.gene34801.t1 MTR_4g024710 38.487 304 155 12 145 428 56 347 4.15e-44 157
MS.gene34801.t1 MTR_8g467800 40.925 281 142 7 9 272 20 293 4.15e-40 147
MS.gene34801.t1 MTR_8g077460 50.376 133 63 3 296 428 246 375 4.20e-34 131
MS.gene34801.t1 MTR_8g077460 40.969 227 111 11 1 211 1 220 1.56e-26 110
MS.gene34801.t1 MTR_8g014210 39.831 236 123 9 205 428 3 231 8.27e-34 127
MS.gene34801.t1 MTR_5g021550 46.980 149 73 4 5 148 15 162 8.35e-31 116
MS.gene34801.t1 MTR_4g024745 36.029 272 148 11 154 407 17 280 2.45e-30 119
MS.gene34801.t1 MTR_3g099800 63.218 87 31 1 340 425 19 105 5.57e-28 107
MS.gene34801.t1 MTR_1g041245 28.764 445 223 21 9 428 11 386 1.02e-27 114
MS.gene34801.t1 MTR_5g008950 27.880 434 228 17 11 428 1 365 1.02e-27 113
MS.gene34801.t1 MTR_7g056433 27.816 435 244 16 8 428 11 389 3.99e-27 112
MS.gene34801.t1 MTR_3g108150 28.276 435 239 18 7 427 11 386 4.29e-27 112
MS.gene34801.t1 MTR_2g036470 27.394 449 243 21 2 427 7 395 2.96e-26 109
MS.gene34801.t1 MTR_5g084070 27.189 434 287 12 1 420 1 419 8.97e-26 108
MS.gene34801.t1 MTR_7g056287 27.252 433 237 16 9 427 3 371 1.25e-25 107
MS.gene34801.t1 MTR_7g056277 27.483 433 236 16 9 427 259 627 3.52e-25 108
MS.gene34801.t1 MTR_7g115270 26.437 435 257 18 8 425 11 399 1.67e-23 102
MS.gene34801.t1 MTR_5g080710 26.869 428 283 13 9 420 33 446 1.47e-22 100
MS.gene34801.t1 MTR_1g108820 29.812 426 240 18 9 425 8 383 5.46e-22 97.4
MS.gene34801.t1 MTR_7g026500 26.879 439 243 18 9 427 14 394 6.46e-22 97.4
MS.gene34801.t1 MTR_8g014290 42.308 156 76 6 5 148 6 159 6.93e-22 92.0
MS.gene34801.t1 MTR_2g007450 27.966 472 238 22 1 425 1 417 1.14e-21 97.1
MS.gene34801.t1 MTR_6g040270 27.714 433 231 19 11 425 10 378 1.21e-21 96.3
MS.gene34801.t1 MTR_7g033915 27.400 427 229 18 9 427 11 364 1.50e-21 95.9
MS.gene34801.t1 MTR_0543s0010 26.316 437 235 14 7 427 84 449 5.10e-21 95.1
MS.gene34801.t1 MTR_7g098510 25.561 446 246 11 3 428 12 391 9.03e-21 94.0
MS.gene34801.t1 MTR_2g008310 27.397 438 232 19 9 428 2 371 3.18e-20 92.4
MS.gene34801.t1 MTR_3g087260 28.333 480 250 20 8 427 11 456 1.85e-19 90.5
MS.gene34801.t1 MTR_7g098480 25.282 443 247 14 3 427 12 388 1.76e-18 87.8
MS.gene34801.t1 MTR_0009s0080 25.686 401 229 16 11 395 20 367 3.13e-18 86.7
MS.gene34801.t1 MTR_3g036250 24.480 433 237 13 9 425 5 363 3.93e-18 85.9
MS.gene34801.t1 MTR_1g085120 25.740 439 248 17 9 428 92 471 4.13e-18 86.7
MS.gene34801.t1 MTR_5g058000 26.512 430 242 18 9 427 8 374 7.83e-18 85.1
MS.gene34801.t1 MTR_7g098570 25.571 438 236 16 9 424 20 389 8.63e-18 85.9
MS.gene34801.t1 MTR_1g085120 26.977 430 254 16 9 428 167 546 1.02e-17 85.9
MS.gene34801.t1 MTR_3g108560 25.858 437 240 17 8 427 19 388 1.39e-17 84.3
MS.gene34801.t1 MTR_4g080787 24.733 469 291 15 3 427 13 463 2.73e-17 84.3
MS.gene34801.t1 MTR_8g085430 32.995 197 113 8 9 193 11 200 2.91e-17 82.8
MS.gene34801.t1 MTR_3g107120 27.430 463 244 23 1 433 1 401 2.99e-17 83.6
MS.gene34801.t1 MTR_0492s0020 25.845 414 216 15 7 400 84 426 5.84e-17 82.8
MS.gene34801.t1 MTR_3g023630 33.005 203 116 8 6 199 5 196 7.08e-17 82.0
MS.gene34801.t1 MTR_7g032380 33.854 192 109 8 9 192 11 192 1.11e-16 81.3
MS.gene34801.t1 MTR_7g032380 29.775 178 103 6 266 428 186 356 1.03e-12 69.3
MS.gene34801.t1 MTR_3g107160 26.879 439 246 17 6 428 4 383 1.13e-16 81.6
MS.gene34801.t1 MTR_4g056030 28.673 422 257 16 9 400 9 416 1.79e-16 81.6
MS.gene34801.t1 MTR_7g056447 33.498 203 105 10 1 190 1 186 3.79e-16 79.0
MS.gene34801.t1 MTR_4g056020 35.294 204 108 8 1 191 1 193 7.55e-16 79.7
MS.gene34801.t1 MTR_8g014230 42.857 84 46 2 338 421 17 98 2.01e-15 72.4
MS.gene34801.t1 MTR_6g022360 24.537 432 246 14 9 427 43 407 2.19e-15 78.2
MS.gene34801.t1 MTR_5g083890 24.829 439 240 19 8 410 5 389 3.06e-15 78.2
MS.gene34801.t1 MTR_4g024720 34.731 167 85 5 5 149 13 177 3.51e-15 74.7
MS.gene34801.t1 MTR_1g115245 35.185 162 88 7 3 156 18 170 2.75e-14 73.6
MS.gene34801.t1 MTR_1g066830 25.761 427 261 18 9 427 8 386 3.18e-14 74.3
MS.gene34801.t1 MTR_4g056040 26.789 489 218 20 1 396 1 442 5.32e-14 74.3
MS.gene34801.t1 MTR_4g080773 24.229 454 288 16 3 416 13 450 5.83e-14 73.9
MS.gene34801.t1 MTR_3g107100 31.034 203 126 7 9 204 11 206 5.99e-14 73.6
MS.gene34801.t1 MTR_4g080773 24.229 454 288 16 3 416 13 450 6.58e-14 73.9
MS.gene34801.t1 MTR_5g045510 23.810 399 221 16 9 395 12 339 2.52e-13 71.6
MS.gene34801.t1 MTR_2g007500 33.171 205 102 9 1 193 6 187 2.60e-13 71.2
MS.gene34801.t1 MTR_1089s0010 33.813 139 80 5 297 428 246 379 2.70e-13 71.2
MS.gene34801.t1 MTR_7g032370 32.778 180 104 8 20 192 1 170 4.15e-13 70.5
MS.gene34801.t1 MTR_7g032370 32.847 137 84 3 299 428 217 352 2.40e-12 68.2
MS.gene34801.t1 MTR_1g038710 25.602 457 264 15 9 416 19 448 1.61e-12 69.3
MS.gene34801.t1 MTR_2g047858 33.158 190 116 8 9 191 115 300 2.00e-12 69.3
MS.gene34801.t1 MTR_4g081030 26.062 353 180 13 7 322 15 323 3.50e-12 68.2
MS.gene34801.t1 MTR_5g008920 31.188 202 119 9 1 193 1 191 3.57e-12 68.2
MS.gene34801.t1 MTR_5g073420 34.021 194 108 11 9 191 11 195 5.49e-12 67.4
MS.gene34801.t1 MTR_7g088260 31.500 200 104 10 6 191 88 268 5.69e-12 67.8
MS.gene34801.t1 MTR_7g056430 30.208 192 102 8 1 191 1 161 7.79e-12 68.2
MS.gene34801.t1 MTR_2g005990 32.512 203 109 11 9 191 6 200 8.25e-12 67.0
MS.gene34801.t1 MTR_7g056420 30.208 192 102 8 1 191 1 161 9.09e-12 67.8
MS.gene34801.t1 MTR_5g012840 29.843 191 104 7 243 428 153 318 1.10e-11 65.9
MS.gene34801.t1 MTR_5g039950 25.432 405 246 13 8 395 22 387 1.84e-11 65.9
MS.gene34801.t1 MTR_4g024770 50.000 60 26 2 3 59 15 73 2.74e-11 59.7
MS.gene34801.t1 MTR_3g040700 27.670 206 122 8 9 201 43 234 3.21e-11 65.5
MS.gene34801.t1 MTR_3g467400 28.708 209 116 9 9 194 3 201 3.32e-11 65.1
MS.gene34801.t1 MTR_5g054920 29.358 109 75 1 291 397 71 179 3.34e-11 62.8
MS.gene34801.t1 MTR_7g055943 31.313 198 115 10 4 191 35 221 3.41e-11 65.1
MS.gene34801.t1 MTR_3g110010 34.715 193 106 11 8 193 12 191 4.88e-11 65.5
MS.gene34801.t1 MTR_3g109982 34.715 193 106 11 8 193 12 191 5.24e-11 65.1
MS.gene34801.t1 MTR_2g047872 32.323 198 116 10 9 194 23 214 6.83e-11 64.3
MS.gene34801.t1 MTR_2g091145 25.553 407 264 17 9 395 21 408 8.46e-11 63.9
MS.gene34801.t1 MTR_7g034115 34.375 192 106 10 9 191 11 191 8.79e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34801.t1 AT5G56420 27.778 450 268 20 6 428 3 422 9.25e-24 103
MS.gene34801.t1 AT5G56420 27.778 450 268 20 6 428 3 422 9.25e-24 103
MS.gene34801.t1 AT5G56420 27.778 450 268 20 6 428 3 422 9.25e-24 103
MS.gene34801.t1 AT4G10400 26.757 441 267 15 9 427 2 408 1.78e-22 99.4
MS.gene34801.t1 AT4G10400 26.757 441 267 15 9 427 2 408 1.78e-22 99.4
MS.gene34801.t1 AT4G10400 26.757 441 267 15 9 427 2 408 1.78e-22 99.4
MS.gene34801.t1 AT4G26340 28.731 449 260 22 9 428 2 419 4.16e-21 95.5
MS.gene34801.t1 AT3G50710 26.813 455 269 21 9 428 2 427 7.97e-20 91.7
MS.gene34801.t1 AT5G56820 28.348 448 257 20 6 425 12 423 9.48e-20 91.3
MS.gene34801.t1 AT4G13965 26.696 457 263 19 2 425 3 420 1.37e-19 90.9
MS.gene34801.t1 AT5G56560 26.517 445 269 21 10 428 6 418 1.45e-19 90.9
MS.gene34801.t1 AT1G78750 25.328 458 295 17 2 425 11 455 3.99e-18 86.7
MS.gene34801.t1 AT1G78750 25.328 458 295 17 2 425 11 455 3.99e-18 86.7
MS.gene34801.t1 AT5G56400 26.233 446 290 15 4 428 28 455 4.76e-18 86.7
MS.gene34801.t1 AT2G26030 24.464 466 277 19 9 425 4 443 6.67e-18 85.9
MS.gene34801.t1 AT5G56440 26.432 454 273 19 9 427 2 429 7.97e-18 85.5
MS.gene34801.t1 AT3G52680 28.540 452 274 17 7 430 19 449 1.11e-17 85.5
MS.gene34801.t1 AT3G59200 36.000 200 100 10 8 191 6 193 2.70e-17 83.6
MS.gene34801.t1 AT3G59200 35.678 199 104 10 7 191 5 193 4.23e-17 84.0
MS.gene34801.t1 AT3G42770 26.316 437 275 16 11 420 1 417 6.35e-17 83.2
MS.gene34801.t1 AT2G26030 24.678 466 271 19 9 425 4 438 7.58e-17 82.8
MS.gene34801.t1 AT2G26030 24.678 466 271 19 9 425 4 438 7.58e-17 82.8
MS.gene34801.t1 AT5G50270 27.400 427 259 19 9 407 2 405 7.62e-17 82.4
MS.gene34801.t1 AT1G78760 25.420 476 264 23 4 429 11 445 1.78e-16 81.6
MS.gene34801.t1 AT2G04230 27.896 423 238 22 7 391 11 404 2.45e-16 81.3
MS.gene34801.t1 AT4G00160 27.826 460 265 21 7 428 14 444 2.45e-16 81.3
MS.gene34801.t1 AT5G22660 26.471 476 260 22 2 425 6 443 3.81e-16 80.5
MS.gene34801.t1 AT5G56370 26.174 447 274 15 9 427 2 420 7.59e-16 79.7
MS.gene34801.t1 AT5G56370 26.174 447 274 15 9 427 2 420 7.59e-16 79.7
MS.gene34801.t1 AT4G26350 26.201 458 269 22 9 428 2 428 1.14e-15 79.0
MS.gene34801.t1 AT3G60040 26.077 441 268 19 8 412 12 430 1.28e-15 79.7
MS.gene34801.t1 AT5G22610 23.991 446 284 15 8 426 17 434 1.78e-15 78.6
MS.gene34801.t1 AT5G53635 26.503 449 273 15 11 427 2 425 2.79e-15 77.8
MS.gene34801.t1 AT3G60040 25.734 443 267 18 8 412 231 649 2.81e-15 78.6
MS.gene34801.t1 AT1G66290 26.049 453 268 22 9 425 29 450 2.87e-15 77.8
MS.gene34801.t1 AT3G60040 25.734 443 267 18 8 412 229 647 3.32e-15 78.2
MS.gene34801.t1 AT3G60040 25.734 443 267 18 8 412 232 650 3.32e-15 78.6
MS.gene34801.t1 AT3G60040 25.734 443 267 18 8 412 231 649 3.38e-15 78.6
MS.gene34801.t1 AT3G59230 31.500 200 116 5 8 191 11 205 6.66e-15 77.0
MS.gene34801.t1 AT4G14103 31.472 197 115 6 6 191 5 192 1.60e-14 75.1
MS.gene34801.t1 AT4G14103 31.472 197 115 6 6 191 5 192 1.60e-14 75.1
MS.gene34801.t1 AT1G66310 27.876 452 260 23 9 425 19 439 1.86e-14 75.5
MS.gene34801.t1 AT4G14103 31.472 197 115 6 6 191 5 192 1.92e-14 75.5
MS.gene34801.t1 AT1G32375 32.407 216 120 10 9 212 2 203 3.42e-14 74.3
MS.gene34801.t1 AT1G32375 32.407 216 120 10 9 212 2 203 3.42e-14 74.3
MS.gene34801.t1 AT5G22720 23.690 477 279 18 5 427 19 464 5.43e-14 73.9
MS.gene34801.t1 AT3G49030 26.490 453 278 20 3 427 15 440 6.46e-14 73.9
MS.gene34801.t1 AT4G09920 29.843 191 116 7 9 191 2 182 7.03e-14 72.8
MS.gene34801.t1 AT4G09920 29.843 191 116 7 9 191 2 182 7.03e-14 72.8
MS.gene34801.t1 AT4G09920 29.534 193 114 7 9 191 2 182 7.91e-14 72.0
MS.gene34801.t1 AT4G09920 29.534 193 114 7 9 191 2 182 7.91e-14 72.0
MS.gene34801.t1 AT4G09920 29.534 193 114 7 9 191 2 182 7.91e-14 72.0
MS.gene34801.t1 AT3G26930 29.258 458 257 22 6 428 18 443 8.15e-14 73.6
MS.gene34801.t1 AT2G26860 26.139 417 250 15 9 392 2 393 2.17e-13 72.0
MS.gene34801.t1 AT2G26860 26.139 417 250 15 9 392 2 393 2.17e-13 72.0
MS.gene34801.t1 AT1G16930 25.257 487 261 24 1 428 7 449 2.42e-13 72.0
MS.gene34801.t1 AT1G16930 25.257 487 261 24 1 428 7 449 2.42e-13 72.0
MS.gene34801.t1 AT1G16930 25.257 487 261 24 1 428 7 449 2.42e-13 72.0
MS.gene34801.t1 AT5G53640 31.507 219 99 10 1 191 1 196 3.94e-13 68.9
MS.gene34801.t1 AT5G38590 24.201 438 261 18 9 413 2 401 4.36e-13 70.9
MS.gene34801.t1 AT3G49030 26.000 450 258 21 3 427 15 414 4.90e-13 70.9
MS.gene34801.t1 AT3G51530 25.882 425 257 17 4 398 22 418 8.01e-13 70.5
MS.gene34801.t1 AT3G52680 33.668 199 108 7 7 194 19 204 1.37e-12 69.3
MS.gene34801.t1 AT5G60610 26.150 413 245 18 9 392 2 383 1.50e-12 69.3
MS.gene34801.t1 AT5G60610 26.150 413 245 18 9 392 2 383 1.50e-12 69.3
MS.gene34801.t1 AT4G13985 24.895 478 258 20 9 425 19 456 1.94e-12 69.3
MS.gene34801.t1 AT4G14096 30.729 192 117 7 8 191 7 190 7.90e-12 67.4
MS.gene34801.t1 AT4G14096 30.729 192 117 7 8 191 7 190 7.90e-12 67.4
MS.gene34801.t1 AT3G59190 32.039 206 114 11 3 191 5 201 8.70e-12 67.0
MS.gene34801.t1 AT3G59190 32.039 206 114 11 3 191 5 201 1.05e-11 67.0
MS.gene34801.t1 AT5G41630 32.536 209 116 11 1 191 4 205 1.55e-11 66.2
MS.gene34801.t1 AT1G06630 25.278 360 219 14 8 335 11 352 2.30e-11 65.9
MS.gene34801.t1 AT1G06630 25.278 360 219 14 8 335 11 352 2.30e-11 65.9
MS.gene34801.t1 AT1G06630 25.278 360 219 14 8 335 11 352 2.30e-11 65.9
MS.gene34801.t1 AT1G06630 25.278 360 219 14 8 335 11 352 2.30e-11 65.9
MS.gene34801.t1 AT1G06630 25.278 360 219 14 8 335 11 352 2.46e-11 65.5
MS.gene34801.t1 AT1G06630 25.278 360 219 14 8 335 11 352 2.46e-11 65.5
MS.gene34801.t1 AT3G26922 33.166 199 105 9 8 194 13 195 2.62e-11 64.7
MS.gene34801.t1 AT3G26922 33.166 199 105 9 8 194 13 195 2.62e-11 64.7
MS.gene34801.t1 AT1G06630 25.278 360 219 14 8 335 20 361 3.46e-11 65.1
MS.gene34801.t1 AT3G59170 30.909 220 116 9 7 193 5 221 3.68e-11 65.5
MS.gene34801.t1 AT3G58940 31.868 182 97 8 9 171 2 175 4.20e-11 65.5
MS.gene34801.t1 AT3G58940 31.868 182 97 8 9 171 2 175 4.20e-11 65.5
MS.gene34801.t1 AT1G06630 28.205 195 126 5 8 191 11 202 4.23e-11 64.3
MS.gene34801.t1 AT1G06630 25.278 360 219 14 8 335 11 352 4.72e-11 65.1
MS.gene34801.t1 AT1G58310 29.954 217 109 8 7 192 6 210 5.48e-11 64.7
MS.gene34801.t1 AT1G66320 25.490 459 256 22 14 425 35 454 7.10e-11 64.3

Find 106 sgRNAs with CRISPR-Local

Find 123 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACCCAGCCGTCTCTCTTTA+AGG 0.096468 8.3:+40119072 MS.gene34801:CDS
TCCGGCTGCCATGTTCTTAA+AGG 0.277720 8.3:-40118817 None:intergenic
TGATATTTCCAGTTACATTA+AGG 0.290409 8.3:-40118267 None:intergenic
CATTGGCCATTTCCACAGTA+TGG 0.333347 8.3:+40118300 MS.gene34801:CDS
TCGACAAATTCGCTTTCAAC+TGG 0.344429 8.3:-40118349 None:intergenic
TGTAACTGGAAATATCAAAT+TGG 0.358240 8.3:+40118273 MS.gene34801:CDS
AGAAGTTTGGTGACATAGTC+TGG 0.364604 8.3:-40118175 None:intergenic
CAGGACATTCGAGTTGAAAC+AGG 0.370609 8.3:-40118603 None:intergenic
CTCGGAGGTGTTTGAGAATA+GGG 0.373089 8.3:-40118372 None:intergenic
ACTCTCTGGCTGCCCCGGTC+TGG 0.378377 8.3:+40118120 MS.gene34801:CDS
CTCGCCGGTGGCGTTATCTC+TGG 0.383892 8.3:+40117595 MS.gene34801:CDS
CTGTGGATCCTTGCTGCCAC+TGG 0.389738 8.3:+40117807 MS.gene34801:CDS
TTCGTGTCATTCAACATCTA+AGG 0.391135 8.3:+40118420 MS.gene34801:CDS
ACCGGGGCAGCCAGAGAGTA+AGG 0.393311 8.3:-40118116 None:intergenic
TGGAGTTACCTTAATGTAAC+TGG 0.395592 8.3:+40118259 MS.gene34801:CDS
AGGTGGGATTTGAGACATTC+AGG 0.399944 8.3:-40118853 None:intergenic
TTTGAATGTCGCGGGATTTG+CGG 0.402806 8.3:-40117725 None:intergenic
CTTCCACCATACTGTGGAAA+TGG 0.406312 8.3:-40118306 None:intergenic
TCAGAAGTTGCCTTACTCTC+TGG 0.409070 8.3:+40118106 MS.gene34801:CDS
ACTATGGCACGACGGAAATC+AGG 0.413973 8.3:+40117477 None:intergenic
GCCTTACTCTCTGGCTGCCC+CGG 0.418848 8.3:+40118115 MS.gene34801:CDS
GCACAAATCTTGTTTCTCTC+AGG 0.423152 8.3:+40117904 MS.gene34801:CDS
ATATCCTTCTATGTGAATAT+AGG 0.424387 8.3:-40118878 None:intergenic
AATATCAAATTGGCCATCAT+TGG 0.425497 8.3:+40118283 MS.gene34801:CDS
GGATTTCGATCTCTTGGAGC+TGG 0.432007 8.3:-40118212 None:intergenic
CTGACCTATATTCACATAGA+AGG 0.433553 8.3:+40118874 MS.gene34801:CDS
TCTCGGAGGTGTTTGAGAAT+AGG 0.436391 8.3:-40118373 None:intergenic
CGTCGGAGAAGTTGAAGACT+TGG 0.448814 8.3:-40117626 None:intergenic
AGTGGTGGATTTCGATCTCT+TGG 0.460719 8.3:-40118218 None:intergenic
TCATATACTCTTTGCGATCT+CGG 0.462793 8.3:-40118390 None:intergenic
ATATGCAACAGGAGTGAGTC+TGG 0.464210 8.3:-40117522 None:intergenic
CTGCCCCGGTCTGGAAACTT+TGG 0.467080 8.3:+40118129 MS.gene34801:CDS
ATATATAATCTCTTCAATGA+TGG 0.467974 8.3:-40118064 None:intergenic
TGGGTCAAATTTAAGTTGGC+AGG 0.480559 8.3:-40119055 None:intergenic
GGAAGGTGGAATGAGAAGTT+TGG 0.482287 8.3:-40118188 None:intergenic
TGAAGTAAATTGCGAAACTC+TGG 0.482988 8.3:-40118563 None:intergenic
GGAAGGACATGATATGCAAC+AGG 0.493505 8.3:-40117533 None:intergenic
CGGCTGGGTCAAATTTAAGT+TGG 0.494896 8.3:-40119059 None:intergenic
CTCACTATCACCAACCCATT+CGG 0.495214 8.3:+40117756 MS.gene34801:CDS
CTTCTATGTGAATATAGGTC+AGG 0.500493 8.3:-40118873 None:intergenic
CGACAAATTCGCTTTCAACT+GGG 0.505565 8.3:-40118348 None:intergenic
TCTCATAATTCAAAGCAAGA+AGG 0.505625 8.3:+40118661 MS.gene34801:CDS
GATCTCTTGGAGCTGGAGGA+AGG 0.507584 8.3:-40118205 None:intergenic
GAAAGGAGGGAGGGTTATTG+CGG 0.510199 8.3:-40117868 None:intergenic
CGGTGAGAGAGAGTTCTTGA+AGG 0.511886 8.3:-40117836 None:intergenic
GGTTATTGCGGAGTCCTTGA+CGG 0.512266 8.3:-40117856 None:intergenic
ATTCACATAGAAGGATATCA+AGG 0.515119 8.3:+40118883 MS.gene34801:CDS
TTCTTGAAGGTGAGGGCCAG+TGG 0.517112 8.3:-40117823 None:intergenic
CTGACAATTTCACCTGGAGC+TGG 0.518959 8.3:+40118239 MS.gene34801:CDS
CTGTTTCAACTCGAATGTCC+TGG 0.520806 8.3:+40118604 MS.gene34801:CDS
CCATCCAAAGTTTCCAGACC+GGG 0.523685 8.3:-40118133 None:intergenic
GACGAGAGTCATCGTAGCTA+CGG 0.525998 8.3:-40117571 None:intergenic
GAATGTCGCGGGATTTGCGG+AGG 0.534092 8.3:-40117722 None:intergenic
GTAGAAACATGCCACCGAAT+GGG 0.534153 8.3:-40117770 None:intergenic
GTAGCTACGGAGGTTCTAGT+AGG 0.538342 8.3:-40117558 None:intergenic
ACCATCCAAAGTTTCCAGAC+CGG 0.539301 8.3:-40118134 None:intergenic
CACCTTAAAGAGAGACGGCT+GGG 0.541106 8.3:-40119074 None:intergenic
AGAGAGAGTTCTTGAAGGTG+AGG 0.541451 8.3:-40117831 None:intergenic
CGATGACTCTCGTCTCTCGC+CGG 0.542962 8.3:+40117580 MS.gene34801:CDS
CCCGGTCTGGAAACTTTGGA+TGG 0.544555 8.3:+40118133 MS.gene34801:CDS
ACCTTTAAGAACATGGCAGC+CGG 0.545276 8.3:+40118816 MS.gene34801:CDS
TCAGGAACCGTTGTTGACTC+CGG 0.545420 8.3:-40118835 None:intergenic
ATTTCTCAAGCACGTTGACC+AGG 0.546076 8.3:-40118622 None:intergenic
GACAAATTCGCTTTCAACTG+GGG 0.549522 8.3:-40118347 None:intergenic
TGTAGAAACATGCCACCGAA+TGG 0.565747 8.3:-40117771 None:intergenic
TTTCGATCTCTTGGAGCTGG+AGG 0.565969 8.3:-40118209 None:intergenic
TCACCTTAAAGAGAGACGGC+TGG 0.570926 8.3:-40119075 None:intergenic
CCACCACTGACAATTTCACC+TGG 0.571233 8.3:+40118233 MS.gene34801:CDS
CTACGGAGGTTCTAGTAGGA+AGG 0.576017 8.3:-40117554 None:intergenic
CTATGTGAATATAGGTCAGG+TGG 0.580589 8.3:-40118870 None:intergenic
CCAGGTGAAATTGTCAGTGG+TGG 0.585148 8.3:-40118233 None:intergenic
AAGATTAACTGATATACCAA+GGG 0.586408 8.3:+40119023 MS.gene34801:CDS
ATTAAGGTAACTCCAGCTCC+AGG 0.586794 8.3:-40118251 None:intergenic
GAGAGAGTTCTTGAAGGTGA+GGG 0.588776 8.3:-40117830 None:intergenic
CCGGTGGCGTTATCTCTGGA+AGG 0.590496 8.3:+40117599 MS.gene34801:CDS
TGGCCATTTCCACAGTATGG+TGG 0.597988 8.3:+40118303 MS.gene34801:CDS
TACACGACTGTGTTCAACTG+TGG 0.605228 8.3:+40117790 MS.gene34801:CDS
AACTATCACCTTTAAGAACA+TGG 0.605685 8.3:+40118809 MS.gene34801:CDS
TTTGTAACATAGCGACTCGT+CGG 0.610095 8.3:-40117643 None:intergenic
ACTGTGGAAATGGCCAATGA+TGG 0.610943 8.3:-40118296 None:intergenic
TGGCAGGTGACAGAGCCCCT+TGG 0.611510 8.3:-40119039 None:intergenic
AAAGATTAACTGATATACCA+AGG 0.612225 8.3:+40119022 MS.gene34801:CDS
TTTAGAACAGTGGCATGAAG+TGG 0.614365 8.3:-40118536 None:intergenic
CTCTTGGAGCTGGAGGAAGG+TGG 0.615652 8.3:-40118202 None:intergenic
GGTGAGGGCCAGTGGCAGCA+AGG 0.616020 8.3:-40117815 None:intergenic
TGACTCTCGTCTCTCGCCGG+TGG 0.621406 8.3:+40117583 MS.gene34801:CDS
AATGTCGCGGGATTTGCGGA+GGG 0.621780 8.3:-40117721 None:intergenic
AGAACTCTCTCTCACCGTCA+AGG 0.624267 8.3:+40117842 MS.gene34801:CDS
GGAGGTTCTAGTAGGAAGGA+AGG 0.628714 8.3:-40117550 None:intergenic
AAACATGCCACCGAATGGGT+TGG 0.634674 8.3:-40117766 None:intergenic
ACTATCACCAACCCATTCGG+TGG 0.634952 8.3:+40117759 MS.gene34801:CDS
GTTTGGTGACATAGTCTGGA+GGG 0.638914 8.3:-40118171 None:intergenic
TATGTGAATATAGGTCAGGT+GGG 0.640734 8.3:-40118869 None:intergenic
CTCTGGATAGTTTAGAACAG+TGG 0.647378 8.3:-40118546 None:intergenic
CCTTCCAGAGATAACGCCAC+CGG 0.649705 8.3:-40117599 None:intergenic
GAAATGCTTCCACCATACTG+TGG 0.660794 8.3:-40118312 None:intergenic
AAGAGATTATATATCGACGT+AGG 0.665926 8.3:+40118073 MS.gene34801:CDS
AGGACATTCGAGTTGAAACA+GGG 0.672325 8.3:-40118602 None:intergenic
GCTCCAGGTGAAATTGTCAG+TGG 0.674603 8.3:-40118236 None:intergenic
TATACTCTTTGCGATCTCGG+AGG 0.680932 8.3:-40118387 None:intergenic
AGTTTGGTGACATAGTCTGG+AGG 0.688870 8.3:-40118172 None:intergenic
TTATGAGAACTTGAAGCATG+TGG 0.695487 8.3:-40118646 None:intergenic
CATCCAAAGTTTCCAGACCG+GGG 0.699918 8.3:-40118132 None:intergenic
ATGGCAGCCGGAGTCAACAA+CGG 0.700697 8.3:+40118828 MS.gene34801:CDS
GAGAGTCATCGTAGCTACGG+AGG 0.707835 8.3:-40117568 None:intergenic
AGATTAACTGATATACCAAG+GGG 0.725053 8.3:+40119024 MS.gene34801:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGTTTAATTAAATCAATTTT+TGG + chr8.3:40118699-40118718 MS.gene34801:intron 10.0%
!!! ACACAAAAATATATTTTTGA+GGG + chr8.3:40118759-40118778 MS.gene34801:intron 15.0%
!!! AGATATTACAATTTTCTTTT+TGG - chr8.3:40117940-40117959 None:intergenic 15.0%
!!! TACACAAAAATATATTTTTG+AGG + chr8.3:40118758-40118777 MS.gene34801:intron 15.0%
!! AATTGATTAAAAAGAAAGGA+GGG - chr8.3:40117884-40117903 None:intergenic 20.0%
!! ATATATAATCTCTTCAATGA+TGG - chr8.3:40118067-40118086 None:intergenic 20.0%
!!! AAGGTGAAGTTTTATTTTTA+TGG + chr8.3:40118439-40118458 MS.gene34801:intron 20.0%
! AAAGATTAACTGATATACCA+AGG + chr8.3:40119022-40119041 MS.gene34801:CDS 25.0%
! AAGATTAACTGATATACCAA+GGG + chr8.3:40119023-40119042 MS.gene34801:CDS 25.0%
! ATATCCTTCTATGTGAATAT+AGG - chr8.3:40118881-40118900 None:intergenic 25.0%
! CAATTGATTAAAAAGAAAGG+AGG - chr8.3:40117885-40117904 None:intergenic 25.0%
! GTGCAATTGATTAAAAAGAA+AGG - chr8.3:40117888-40117907 None:intergenic 25.0%
! TGATATTTCCAGTTACATTA+AGG - chr8.3:40118270-40118289 None:intergenic 25.0%
! TGTAACTGGAAATATCAAAT+TGG + chr8.3:40118273-40118292 MS.gene34801:CDS 25.0%
AAGAGATTATATATCGACGT+AGG + chr8.3:40118073-40118092 MS.gene34801:CDS 30.0%
AATATCAAATTGGCCATCAT+TGG + chr8.3:40118283-40118302 MS.gene34801:CDS 30.0%
AGATTAACTGATATACCAAG+GGG + chr8.3:40119024-40119043 MS.gene34801:CDS 30.0%
ATTCACATAGAAGGATATCA+AGG + chr8.3:40118883-40118902 MS.gene34801:CDS 30.0%
TACATGATAACAACAAGTGA+TGG - chr8.3:40118506-40118525 None:intergenic 30.0%
TCTCATAATTCAAAGCAAGA+AGG + chr8.3:40118661-40118680 MS.gene34801:CDS 30.0%
! AACTATCACCTTTAAGAACA+TGG + chr8.3:40118809-40118828 MS.gene34801:CDS 30.0%
!! CATTTGCTGAATATCTTTTG+AGG + chr8.3:40118923-40118942 MS.gene34801:CDS 30.0%
CTGACCTATATTCACATAGA+AGG + chr8.3:40118874-40118893 MS.gene34801:CDS 35.0%
CTTCTATGTGAATATAGGTC+AGG - chr8.3:40118876-40118895 None:intergenic 35.0%
GATTAAAAAGAAAGGAGGGA+GGG - chr8.3:40117880-40117899 None:intergenic 35.0%
TATGTGAATATAGGTCAGGT+GGG - chr8.3:40118872-40118891 None:intergenic 35.0%
TCATATACTCTTTGCGATCT+CGG - chr8.3:40118393-40118412 None:intergenic 35.0%
TGAAGTAAATTGCGAAACTC+TGG - chr8.3:40118566-40118585 None:intergenic 35.0%
TGATTAAAAAGAAAGGAGGG+AGG - chr8.3:40117881-40117900 None:intergenic 35.0%
TGGAGTTACCTTAATGTAAC+TGG + chr8.3:40118259-40118278 MS.gene34801:CDS 35.0%
TTATGAGAACTTGAAGCATG+TGG - chr8.3:40118649-40118668 None:intergenic 35.0%
! ATTGAACTTTTGAATGTCGC+GGG - chr8.3:40117736-40117755 None:intergenic 35.0%
! GATTGAACTTTTGAATGTCG+CGG - chr8.3:40117737-40117756 None:intergenic 35.0%
! TTCGTGTCATTCAACATCTA+AGG + chr8.3:40118420-40118439 MS.gene34801:CDS 35.0%
!! GCTGAATATCTTTTGAGGAA+CGG + chr8.3:40118928-40118947 MS.gene34801:CDS 35.0%
!!! GGTGTTTTGAAAAGACAAAC+AGG - chr8.3:40118000-40118019 None:intergenic 35.0%
CGACAAATTCGCTTTCAACT+GGG - chr8.3:40118351-40118370 None:intergenic 40.0%
CTATGTGAATATAGGTCAGG+TGG - chr8.3:40118873-40118892 None:intergenic 40.0%
GACAAATTCGCTTTCAACTG+GGG - chr8.3:40118350-40118369 None:intergenic 40.0%
TCGACAAATTCGCTTTCAAC+TGG - chr8.3:40118352-40118371 None:intergenic 40.0%
TTTGTAACATAGCGACTCGT+CGG - chr8.3:40117646-40117665 None:intergenic 40.0%
! AGAAGTTTGGTGACATAGTC+TGG - chr8.3:40118178-40118197 None:intergenic 40.0%
! CTCTGGATAGTTTAGAACAG+TGG - chr8.3:40118549-40118568 None:intergenic 40.0%
! GCACAAATCTTGTTTCTCTC+AGG + chr8.3:40117904-40117923 MS.gene34801:CDS 40.0%
! TTTAGAACAGTGGCATGAAG+TGG - chr8.3:40118539-40118558 None:intergenic 40.0%
!! AGGACATTCGAGTTGAAACA+GGG - chr8.3:40118605-40118624 None:intergenic 40.0%
!! TGGGTCAAATTTAAGTTGGC+AGG - chr8.3:40119058-40119077 None:intergenic 40.0%
!! TGTTGTCTCTTGTTGTTGGT+AGG + chr8.3:40118783-40118802 MS.gene34801:intron 40.0%
ACCATCCAAAGTTTCCAGAC+CGG - chr8.3:40118137-40118156 None:intergenic 45.0%
ACTGTGGAAATGGCCAATGA+TGG - chr8.3:40118299-40118318 None:intergenic 45.0%
AGAGAGAGTTCTTGAAGGTG+AGG - chr8.3:40117834-40117853 None:intergenic 45.0%
ATATGCAACAGGAGTGAGTC+TGG - chr8.3:40117525-40117544 None:intergenic 45.0%
ATTAAGGTAACTCCAGCTCC+AGG - chr8.3:40118254-40118273 None:intergenic 45.0%
ATTTCTCAAGCACGTTGACC+AGG - chr8.3:40118625-40118644 None:intergenic 45.0%
CATTGGCCATTTCCACAGTA+TGG + chr8.3:40118300-40118319 MS.gene34801:CDS 45.0%
CGGCTGGGTCAAATTTAAGT+TGG - chr8.3:40119062-40119081 None:intergenic 45.0%
CTCACTATCACCAACCCATT+CGG + chr8.3:40117756-40117775 MS.gene34801:CDS 45.0%
CTGTTTCAACTCGAATGTCC+TGG + chr8.3:40118604-40118623 MS.gene34801:CDS 45.0%
CTTCCACCATACTGTGGAAA+TGG - chr8.3:40118309-40118328 None:intergenic 45.0%
GAAATGCTTCCACCATACTG+TGG - chr8.3:40118315-40118334 None:intergenic 45.0%
GAACTTCACACTCAAGTCTG+TGG - chr8.3:40118021-40118040 None:intergenic 45.0%
GAGAGAGTTCTTGAAGGTGA+GGG - chr8.3:40117833-40117852 None:intergenic 45.0%
GGAAGGACATGATATGCAAC+AGG - chr8.3:40117536-40117555 None:intergenic 45.0%
GGAAGGTGGAATGAGAAGTT+TGG - chr8.3:40118191-40118210 None:intergenic 45.0%
GTAGAAACATGCCACCGAAT+GGG - chr8.3:40117773-40117792 None:intergenic 45.0%
TACACGACTGTGTTCAACTG+TGG + chr8.3:40117790-40117809 MS.gene34801:CDS 45.0%
TATACTCTTTGCGATCTCGG+AGG - chr8.3:40118390-40118409 None:intergenic 45.0%
TCAGAAGTTGCCTTACTCTC+TGG + chr8.3:40118106-40118125 MS.gene34801:CDS 45.0%
TGTAGAAACATGCCACCGAA+TGG - chr8.3:40117774-40117793 None:intergenic 45.0%
TTTGAATGTCGCGGGATTTG+CGG - chr8.3:40117728-40117747 None:intergenic 45.0%
! ACCTTTAAGAACATGGCAGC+CGG + chr8.3:40118816-40118835 MS.gene34801:CDS 45.0%
! AGGTGGGATTTGAGACATTC+AGG - chr8.3:40118856-40118875 None:intergenic 45.0%
! AGTTTGGTGACATAGTCTGG+AGG - chr8.3:40118175-40118194 None:intergenic 45.0%
! GGGATGTTGTCTCTTGTTGT+TGG + chr8.3:40118779-40118798 MS.gene34801:intron 45.0%
! GTTTGGTGACATAGTCTGGA+GGG - chr8.3:40118174-40118193 None:intergenic 45.0%
!! AGTGGTGGATTTCGATCTCT+TGG - chr8.3:40118221-40118240 None:intergenic 45.0%
!! CAGGACATTCGAGTTGAAAC+AGG - chr8.3:40118606-40118625 None:intergenic 45.0%
!! CTCGGAGGTGTTTGAGAATA+GGG - chr8.3:40118375-40118394 None:intergenic 45.0%
!! TCTCGGAGGTGTTTGAGAAT+AGG - chr8.3:40118376-40118395 None:intergenic 45.0%
!! TGTCTCTTGTTGTTGGTAGG+AGG + chr8.3:40118786-40118805 MS.gene34801:intron 45.0%
AAACATGCCACCGAATGGGT+TGG - chr8.3:40117769-40117788 None:intergenic 50.0%
ACTATCACCAACCCATTCGG+TGG + chr8.3:40117759-40117778 MS.gene34801:CDS 50.0%
AGAACTCTCTCTCACCGTCA+AGG + chr8.3:40117842-40117861 MS.gene34801:CDS 50.0%
CATCCAAAGTTTCCAGACCG+GGG - chr8.3:40118135-40118154 None:intergenic 50.0%
CCACCACTGACAATTTCACC+TGG + chr8.3:40118233-40118252 MS.gene34801:CDS 50.0%
CCAGGTGAAATTGTCAGTGG+TGG - chr8.3:40118236-40118255 None:intergenic 50.0%
CCATCCAAAGTTTCCAGACC+GGG - chr8.3:40118136-40118155 None:intergenic 50.0%
CGGTGAGAGAGAGTTCTTGA+AGG - chr8.3:40117839-40117858 None:intergenic 50.0%
CGTCGGAGAAGTTGAAGACT+TGG - chr8.3:40117629-40117648 None:intergenic 50.0%
CTGACAATTTCACCTGGAGC+TGG + chr8.3:40118239-40118258 MS.gene34801:CDS 50.0%
GAAAGGAGGGAGGGTTATTG+CGG - chr8.3:40117871-40117890 None:intergenic 50.0%
GACGAGAGTCATCGTAGCTA+CGG - chr8.3:40117574-40117593 None:intergenic 50.0%
GCTCCAGGTGAAATTGTCAG+TGG - chr8.3:40118239-40118258 None:intergenic 50.0%
GGATTTCGATCTCTTGGAGC+TGG - chr8.3:40118215-40118234 None:intergenic 50.0%
GGTTATTGCGGAGTCCTTGA+CGG - chr8.3:40117859-40117878 None:intergenic 50.0%
TCCGGCTGCCATGTTCTTAA+AGG - chr8.3:40118820-40118839 None:intergenic 50.0%
TGGCCATTTCCACAGTATGG+TGG + chr8.3:40118303-40118322 MS.gene34801:CDS 50.0%
TTTCGATCTCTTGGAGCTGG+AGG - chr8.3:40118212-40118231 None:intergenic 50.0%
! CTACGGAGGTTCTAGTAGGA+AGG - chr8.3:40117557-40117576 None:intergenic 50.0%
! GGAGGTTCTAGTAGGAAGGA+AGG - chr8.3:40117553-40117572 None:intergenic 50.0%
! GTAGCTACGGAGGTTCTAGT+AGG - chr8.3:40117561-40117580 None:intergenic 50.0%
!! TCAGGAACCGTTGTTGACTC+CGG - chr8.3:40118838-40118857 None:intergenic 50.0%
AATGTCGCGGGATTTGCGGA+GGG - chr8.3:40117724-40117743 None:intergenic 55.0%
ATGGCAGCCGGAGTCAACAA+CGG + chr8.3:40118828-40118847 MS.gene34801:CDS 55.0%
CCCGGTCTGGAAACTTTGGA+TGG + chr8.3:40118133-40118152 MS.gene34801:CDS 55.0%
CCTTCCAGAGATAACGCCAC+CGG - chr8.3:40117602-40117621 None:intergenic 55.0%
GAGAGTCATCGTAGCTACGG+AGG - chr8.3:40117571-40117590 None:intergenic 55.0%
GATCTCTTGGAGCTGGAGGA+AGG - chr8.3:40118208-40118227 None:intergenic 55.0%
TTCTTGAAGGTGAGGGCCAG+TGG - chr8.3:40117826-40117845 None:intergenic 55.0%
CAGTGGCATGAAGTGGCGAC+TGG - chr8.3:40118532-40118551 None:intergenic 60.0%
CCGGTGGCGTTATCTCTGGA+AGG + chr8.3:40117599-40117618 MS.gene34801:CDS 60.0%
CGATGACTCTCGTCTCTCGC+CGG + chr8.3:40117580-40117599 MS.gene34801:CDS 60.0%
CTCTTGGAGCTGGAGGAAGG+TGG - chr8.3:40118205-40118224 None:intergenic 60.0%
CTGCCCCGGTCTGGAAACTT+TGG + chr8.3:40118129-40118148 MS.gene34801:CDS 60.0%
CTGTGGATCCTTGCTGCCAC+TGG + chr8.3:40117807-40117826 MS.gene34801:CDS 60.0%
GAATGTCGCGGGATTTGCGG+AGG - chr8.3:40117725-40117744 None:intergenic 60.0%
ACCGGGGCAGCCAGAGAGTA+AGG - chr8.3:40118119-40118138 None:intergenic 65.0%
CTCGCCGGTGGCGTTATCTC+TGG + chr8.3:40117595-40117614 MS.gene34801:CDS 65.0%
GCCTTACTCTCTGGCTGCCC+CGG + chr8.3:40118115-40118134 MS.gene34801:CDS 65.0%
TGACTCTCGTCTCTCGCCGG+TGG + chr8.3:40117583-40117602 MS.gene34801:CDS 65.0%
TGGCAGGTGACAGAGCCCCT+TGG - chr8.3:40119042-40119061 None:intergenic 65.0%
ACTCTCTGGCTGCCCCGGTC+TGG + chr8.3:40118120-40118139 MS.gene34801:CDS 70.0%
GGTGAGGGCCAGTGGCAGCA+AGG - chr8.3:40117818-40117837 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 40117480 40119092 40117480 ID=MS.gene34801
chr8.3 mRNA 40117480 40119092 40117480 ID=MS.gene34801.t1;Parent=MS.gene34801
chr8.3 exon 40117480 40117925 40117480 ID=MS.gene34801.t1.exon1;Parent=MS.gene34801.t1
chr8.3 CDS 40117480 40117925 40117480 ID=cds.MS.gene34801.t1;Parent=MS.gene34801.t1
chr8.3 exon 40118024 40118441 40118024 ID=MS.gene34801.t1.exon2;Parent=MS.gene34801.t1
chr8.3 CDS 40118024 40118441 40118024 ID=cds.MS.gene34801.t1;Parent=MS.gene34801.t1
chr8.3 exon 40118533 40118682 40118533 ID=MS.gene34801.t1.exon3;Parent=MS.gene34801.t1
chr8.3 CDS 40118533 40118682 40118533 ID=cds.MS.gene34801.t1;Parent=MS.gene34801.t1
chr8.3 exon 40118805 40119092 40118805 ID=MS.gene34801.t1.exon4;Parent=MS.gene34801.t1
chr8.3 CDS 40118805 40119092 40118805 ID=cds.MS.gene34801.t1;Parent=MS.gene34801.t1
Gene Sequence

>MS.gene34801

ATGGCACGACGGAAATCAGGCAAAGACAGATTGAGCAGTTTACCAGACTCACTCCTGTTGCATATCATGTCCTTCCTTCCTACTAGAACCTCCGTAGCTACGATGACTCTCGTCTCTCGCCGGTGGCGTTATCTCTGGAAGGATCTCCAAGTCTTCAACTTCTCCGACGAGTCGCTATGTTACAAAACAGTGTCTGATGAATTGTTCAGAAAATTTGCATTCTTCGTGAACGCTGTTCTCACCCTCCGCAAATCCCGCGACATTCAAAAGTTCAATCTCACTATCACCAACCCATTCGGTGGCATGTTTCTACACGACTGTGTTCAACTGTGGATCCTTGCTGCCACTGGCCCTCACCTTCAAGAACTCTCTCTCACCGTCAAGGACTCCGCAATAACCCTCCCTCCTTTCTTTTTAATCAATTGCACAAATCTTGTTTCTCTCAGGTAAATTATCTCCAAAAAGAAAATTGTAATATCTGAACATTTAAATAATATACATACAATGTTATCAATAACCTGTTTGTCTTTTCAAAACACCACAGACTTGAGTGTGAAGTTCATATCAATTCTGCATTTCATTTTCCATCATTGAAGAGATTATATATCGACGTAGGCGTTATGATTTCAGAAGTTGCCTTACTCTCTGGCTGCCCCGGTCTGGAAACTTTGGATGGTTACTTTTGCTTTCACCCTCCAGACTATGTCACCAAACTTCTCATTCCACCTTCCTCCAGCTCCAAGAGATCGAAATCCACCACTGACAATTTCACCTGGAGCTGGAGTTACCTTAATGTAACTGGAAATATCAAATTGGCCATCATTGGCCATTTCCACAGTATGGTGGAAGCATTTCTTGATGTATTTTCCCCAGTTGAAAGCGAATTTGTCGACCCTATTCTCAAACACCTCCGAGATCGCAAAGAGTATATGAATCTACTTTCGTGTCATTCAACATCTAAGGTGAAGTTTTATTTTTATGGTTTATATGTATTTGTATATATAGTATTGCACTAATTTTGCGCCATCACTTGTTGTTATCATGTACAACCAGTCGCCACTTCATGCCACTGTTCTAAACTATCCAGAGTTTCGCAATTTACTTCATCTAAAGTTCATTCTTCCCTGTTTCAACTCGAATGTCCTGGTCAACGTGCTTGAGAAATGCCACATGCTTCAAGTTCTCATAATTCAAAGCAAGAAGGTTTGTTGAGTTCTCAAGTTTAATTAAATCAATTTTTGGTCTGTTCATGTATGTATGCATGTATGTATGTATCTATACACAAAAATATATTTTTGAGGGATGTTGTCTCTTGTTGTTGGTAGGAGGAACTATCACCTTTAAGAACATGGCAGCCGGAGTCAACAACGGTTCCTGAATGTCTCAAATCCCACCTGACCTATATTCACATAGAAGGATATCAAGGATTTGAAGACGAGCTTACATTTGCTGAATATCTTTTGAGGAACGGACTTGTTTTGCAGACAATGCTTATTTTTGTTGATACTTCAATGCACACAACGAATAAGTATCTTTCTGTCAAAAGATTAACTGATATACCAAGGGGCTCTGTCACCTGCCAACTTAAATTTGACCCAGCCGTCTCTCTTTAA

Protein sequence

>MS.gene34801.t1

MARRKSGKDRLSSLPDSLLLHIMSFLPTRTSVATMTLVSRRWRYLWKDLQVFNFSDESLCYKTVSDELFRKFAFFVNAVLTLRKSRDIQKFNLTITNPFGGMFLHDCVQLWILAATGPHLQELSLTVKDSAITLPPFFLINCTNLVSLRLECEVHINSAFHFPSLKRLYIDVGVMISEVALLSGCPGLETLDGYFCFHPPDYVTKLLIPPSSSSKRSKSTTDNFTWSWSYLNVTGNIKLAIIGHFHSMVEAFLDVFSPVESEFVDPILKHLRDRKEYMNLLSCHSTSKSPLHATVLNYPEFRNLLHLKFILPCFNSNVLVNVLEKCHMLQVLIIQSKKEELSPLRTWQPESTTVPECLKSHLTYIHIEGYQGFEDELTFAEYLLRNGLVLQTMLIFVDTSMHTTNKYLSVKRLTDIPRGSVTCQLKFDPAVSL