Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055877.t1 | XP_003628587.2 | 56.8 | 447 | 146 | 7 | 4 | 409 | 470 | 910 | 5.00E-127 | 464.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055877.t1 | Q8H1R7 | 24.8 | 435 | 261 | 15 | 24 | 409 | 1 | 418 | 6.4e-14 | 80.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055877.t1 | G7LEM0 | 53.4 | 476 | 146 | 8 | 4 | 409 | 7 | 476 | 1.6e-122 | 449.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055877.t1 | MTR_8g062300 | 53.527 | 482 | 145 | 10 | 1 | 409 | 1 | 476 | 5.69e-159 | 457 |
MS.gene055877.t1 | MTR_8g062080 | 51.701 | 441 | 142 | 9 | 23 | 409 | 21 | 444 | 1.48e-134 | 394 |
MS.gene055877.t1 | MTR_8g070950 | 50.545 | 459 | 151 | 10 | 1 | 409 | 1 | 433 | 4.61e-132 | 387 |
MS.gene055877.t1 | MTR_8g062010 | 53.349 | 433 | 146 | 12 | 23 | 409 | 7 | 429 | 2.39e-130 | 382 |
MS.gene055877.t1 | MTR_8g062310 | 50.119 | 421 | 158 | 8 | 24 | 409 | 24 | 427 | 1.22e-128 | 378 |
MS.gene055877.t1 | MTR_2g086020 | 55.278 | 360 | 114 | 4 | 51 | 409 | 1 | 314 | 6.03e-121 | 354 |
MS.gene055877.t1 | MTR_8g058965 | 45.957 | 470 | 169 | 13 | 9 | 409 | 2 | 455 | 6.74e-118 | 351 |
MS.gene055877.t1 | MTR_8g469020 | 45.833 | 456 | 168 | 9 | 23 | 409 | 5 | 450 | 7.98e-118 | 351 |
MS.gene055877.t1 | MTR_8g467790 | 50.829 | 362 | 126 | 10 | 24 | 351 | 147 | 490 | 3.28e-104 | 318 |
MS.gene055877.t1 | MTR_4g050250 | 43.578 | 436 | 150 | 13 | 1 | 356 | 1 | 420 | 8.68e-97 | 296 |
MS.gene055877.t1 | MTR_8g468810 | 36.134 | 476 | 223 | 13 | 1 | 409 | 1 | 462 | 3.86e-75 | 241 |
MS.gene055877.t1 | MTR_2g083840 | 34.899 | 447 | 218 | 13 | 25 | 409 | 21 | 456 | 5.70e-64 | 212 |
MS.gene055877.t1 | MTR_8g058970 | 35.163 | 492 | 220 | 19 | 1 | 409 | 1 | 476 | 4.10e-63 | 211 |
MS.gene055877.t1 | MTR_4g032730 | 33.333 | 483 | 224 | 16 | 9 | 410 | 2 | 467 | 3.63e-60 | 202 |
MS.gene055877.t1 | MTR_8g468760 | 35.431 | 429 | 222 | 16 | 21 | 409 | 5 | 418 | 1.10e-55 | 189 |
MS.gene055877.t1 | MTR_8g062270 | 32.751 | 458 | 219 | 18 | 23 | 409 | 14 | 453 | 1.59e-53 | 184 |
MS.gene055877.t1 | MTR_8g468810 | 35.309 | 388 | 172 | 12 | 1 | 323 | 1 | 374 | 3.22e-53 | 182 |
MS.gene055877.t1 | MTR_8g077460 | 35.821 | 402 | 204 | 18 | 25 | 409 | 10 | 374 | 2.16e-52 | 179 |
MS.gene055877.t1 | MTR_5g092960 | 31.158 | 475 | 238 | 14 | 7 | 410 | 6 | 462 | 5.32e-52 | 181 |
MS.gene055877.t1 | MTR_8g468840 | 34.076 | 449 | 221 | 16 | 25 | 410 | 14 | 450 | 1.14e-50 | 177 |
MS.gene055877.t1 | MTR_8g014260 | 32.983 | 476 | 226 | 20 | 1 | 409 | 1 | 450 | 1.88e-50 | 176 |
MS.gene055877.t1 | MTR_8g468810 | 38.851 | 296 | 142 | 9 | 1 | 270 | 1 | 283 | 1.06e-46 | 163 |
MS.gene055877.t1 | MTR_8g468810 | 38.851 | 296 | 142 | 9 | 1 | 270 | 1 | 283 | 1.19e-46 | 163 |
MS.gene055877.t1 | MTR_8g467800 | 32.553 | 470 | 238 | 17 | 1 | 409 | 1 | 452 | 2.01e-46 | 166 |
MS.gene055877.t1 | MTR_8g468810 | 38.851 | 296 | 142 | 9 | 1 | 270 | 1 | 283 | 2.86e-46 | 163 |
MS.gene055877.t1 | MTR_8g014160 | 34.442 | 421 | 221 | 18 | 16 | 409 | 32 | 424 | 6.97e-45 | 161 |
MS.gene055877.t1 | MTR_8g445780 | 33.173 | 416 | 199 | 16 | 1 | 363 | 1 | 390 | 4.97e-44 | 158 |
MS.gene055877.t1 | MTR_5g092960 | 30.709 | 381 | 182 | 11 | 7 | 320 | 6 | 371 | 3.08e-31 | 123 |
MS.gene055877.t1 | MTR_1g041245 | 30.221 | 407 | 234 | 16 | 23 | 409 | 9 | 385 | 1.71e-29 | 118 |
MS.gene055877.t1 | MTR_4g024710 | 43.182 | 132 | 72 | 3 | 278 | 409 | 218 | 346 | 9.85e-26 | 107 |
MS.gene055877.t1 | MTR_7g115270 | 29.854 | 412 | 236 | 18 | 25 | 407 | 12 | 399 | 1.54e-25 | 107 |
MS.gene055877.t1 | MTR_3g099800 | 64.103 | 78 | 27 | 1 | 321 | 397 | 18 | 95 | 2.22e-25 | 99.8 |
MS.gene055877.t1 | MTR_8g014210 | 32.129 | 249 | 123 | 10 | 181 | 409 | 8 | 230 | 4.07e-25 | 102 |
MS.gene055877.t1 | MTR_1089s0010 | 27.250 | 400 | 251 | 16 | 24 | 410 | 7 | 379 | 1.94e-24 | 104 |
MS.gene055877.t1 | MTR_8g467800 | 34.130 | 293 | 160 | 12 | 1 | 274 | 1 | 279 | 2.65e-23 | 100 |
MS.gene055877.t1 | MTR_7g098510 | 27.586 | 406 | 244 | 16 | 23 | 409 | 16 | 390 | 9.11e-23 | 99.4 |
MS.gene055877.t1 | MTR_7g026500 | 24.818 | 411 | 257 | 13 | 23 | 409 | 12 | 394 | 4.03e-22 | 97.8 |
MS.gene055877.t1 | MTR_7g098570 | 28.500 | 400 | 248 | 14 | 20 | 406 | 15 | 389 | 4.48e-22 | 98.6 |
MS.gene055877.t1 | MTR_3g107100 | 28.710 | 411 | 253 | 17 | 25 | 414 | 11 | 402 | 7.82e-22 | 97.1 |
MS.gene055877.t1 | MTR_7g098480 | 29.529 | 403 | 236 | 16 | 24 | 409 | 17 | 388 | 1.20e-21 | 97.1 |
MS.gene055877.t1 | MTR_7g032380 | 28.928 | 401 | 217 | 19 | 23 | 409 | 9 | 355 | 1.60e-20 | 92.4 |
MS.gene055877.t1 | MTR_3g107160 | 28.415 | 366 | 230 | 15 | 25 | 377 | 10 | 356 | 2.70e-20 | 92.4 |
MS.gene055877.t1 | MTR_5g073420 | 25.679 | 405 | 259 | 17 | 23 | 414 | 9 | 384 | 2.95e-20 | 92.0 |
MS.gene055877.t1 | MTR_4g024745 | 31.752 | 274 | 134 | 10 | 164 | 389 | 12 | 280 | 3.89e-20 | 90.1 |
MS.gene055877.t1 | MTR_7g034115 | 30.214 | 374 | 209 | 16 | 24 | 377 | 10 | 351 | 5.80e-19 | 88.2 |
MS.gene055877.t1 | MTR_5g008950 | 26.238 | 404 | 245 | 16 | 27 | 413 | 1 | 368 | 5.92e-19 | 88.2 |
MS.gene055877.t1 | MTR_3g108150 | 26.555 | 418 | 230 | 20 | 25 | 409 | 13 | 386 | 1.51e-18 | 87.0 |
MS.gene055877.t1 | MTR_7g056447 | 35.714 | 196 | 108 | 7 | 20 | 210 | 4 | 186 | 7.40e-18 | 84.0 |
MS.gene055877.t1 | MTR_3g107120 | 29.737 | 380 | 212 | 15 | 25 | 375 | 9 | 362 | 7.43e-18 | 85.1 |
MS.gene055877.t1 | MTR_5g080710 | 27.494 | 411 | 229 | 17 | 24 | 382 | 32 | 425 | 8.43e-18 | 85.5 |
MS.gene055877.t1 | MTR_4g039440 | 27.336 | 428 | 252 | 20 | 6 | 409 | 19 | 411 | 8.68e-18 | 85.1 |
MS.gene055877.t1 | MTR_7g055943 | 26.634 | 413 | 253 | 17 | 21 | 410 | 36 | 421 | 1.54e-17 | 84.3 |
MS.gene055877.t1 | MTR_5g058000 | 25.622 | 402 | 249 | 17 | 24 | 409 | 7 | 374 | 1.90e-17 | 84.0 |
MS.gene055877.t1 | MTR_7g056420 | 26.735 | 389 | 224 | 15 | 25 | 397 | 9 | 352 | 2.43e-17 | 85.1 |
MS.gene055877.t1 | MTR_7g056430 | 26.735 | 389 | 224 | 15 | 25 | 397 | 9 | 352 | 3.87e-17 | 84.3 |
MS.gene055877.t1 | MTR_1g108820 | 28.536 | 403 | 245 | 20 | 24 | 408 | 7 | 384 | 5.34e-17 | 82.4 |
MS.gene055877.t1 | MTR_3g082890 | 27.273 | 418 | 242 | 20 | 25 | 410 | 97 | 484 | 6.20e-17 | 82.8 |
MS.gene055877.t1 | MTR_5g021550 | 38.854 | 157 | 65 | 9 | 25 | 163 | 19 | 162 | 6.79e-17 | 78.2 |
MS.gene055877.t1 | MTR_5g084070 | 25.761 | 427 | 250 | 19 | 24 | 402 | 12 | 419 | 1.09e-16 | 82.0 |
MS.gene055877.t1 | MTR_4g098590 | 28.831 | 385 | 209 | 20 | 27 | 377 | 1 | 354 | 1.31e-16 | 81.3 |
MS.gene055877.t1 | MTR_3g108560 | 26.683 | 401 | 246 | 15 | 25 | 409 | 20 | 388 | 2.10e-16 | 80.9 |
MS.gene055877.t1 | MTR_6g044560 | 24.169 | 451 | 257 | 17 | 2 | 409 | 155 | 563 | 2.58e-16 | 81.3 |
MS.gene055877.t1 | MTR_6g045333 | 24.510 | 408 | 264 | 14 | 24 | 409 | 60 | 445 | 2.81e-16 | 80.9 |
MS.gene055877.t1 | MTR_3g071850 | 24.682 | 393 | 258 | 14 | 24 | 397 | 23 | 396 | 5.12e-16 | 80.9 |
MS.gene055877.t1 | MTR_3g082890 | 24.777 | 448 | 252 | 19 | 25 | 410 | 17 | 441 | 6.66e-16 | 79.7 |
MS.gene055877.t1 | MTR_3g036250 | 25.570 | 395 | 248 | 17 | 24 | 407 | 4 | 363 | 7.54e-16 | 79.0 |
MS.gene055877.t1 | MTR_2g008320 | 27.073 | 410 | 249 | 21 | 19 | 408 | 46 | 425 | 8.89e-16 | 79.3 |
MS.gene055877.t1 | MTR_6g011460 | 25.653 | 421 | 267 | 15 | 7 | 410 | 30 | 421 | 1.72e-15 | 78.2 |
MS.gene055877.t1 | MTR_0543s0010 | 26.382 | 398 | 246 | 15 | 25 | 409 | 86 | 449 | 2.74e-15 | 77.8 |
MS.gene055877.t1 | MTR_6g044572 | 24.528 | 424 | 245 | 20 | 24 | 409 | 1 | 387 | 3.16e-15 | 77.4 |
MS.gene055877.t1 | MTR_7g033990 | 26.471 | 374 | 225 | 16 | 23 | 377 | 9 | 351 | 3.18e-15 | 77.4 |
MS.gene055877.t1 | MTR_5g045510 | 25.187 | 401 | 253 | 15 | 22 | 411 | 9 | 373 | 6.44e-15 | 76.3 |
MS.gene055877.t1 | MTR_8g014230 | 45.570 | 79 | 41 | 2 | 320 | 398 | 17 | 93 | 6.50e-15 | 70.9 |
MS.gene055877.t1 | MTR_6g022360 | 27.151 | 372 | 221 | 15 | 21 | 377 | 39 | 375 | 2.42e-14 | 74.7 |
MS.gene055877.t1 | MTR_3g467400 | 24.010 | 404 | 250 | 13 | 24 | 409 | 2 | 366 | 2.58e-14 | 74.3 |
MS.gene055877.t1 | MTR_0492s0020 | 26.776 | 366 | 221 | 15 | 25 | 377 | 86 | 417 | 2.72e-14 | 74.7 |
MS.gene055877.t1 | MTR_7g034110 | 31.507 | 219 | 118 | 7 | 24 | 227 | 10 | 211 | 6.04e-14 | 73.2 |
MS.gene055877.t1 | MTR_2g036470 | 24.566 | 403 | 251 | 17 | 32 | 409 | 21 | 395 | 1.15e-13 | 72.4 |
MS.gene055877.t1 | MTR_2g007400 | 23.488 | 430 | 259 | 18 | 19 | 410 | 6 | 403 | 1.20e-13 | 72.4 |
MS.gene055877.t1 | MTR_3g105060 | 26.161 | 409 | 232 | 20 | 23 | 409 | 12 | 372 | 1.50e-13 | 72.0 |
MS.gene055877.t1 | MTR_7g075820 | 25.301 | 415 | 255 | 17 | 25 | 410 | 6 | 394 | 9.85e-13 | 69.7 |
MS.gene055877.t1 | MTR_2g007500 | 31.472 | 197 | 108 | 8 | 23 | 213 | 12 | 187 | 7.63e-12 | 66.6 |
MS.gene055877.t1 | MTR_4g093690 | 29.665 | 209 | 112 | 11 | 25 | 217 | 18 | 207 | 9.37e-12 | 65.5 |
MS.gene055877.t1 | MTR_4g024720 | 34.965 | 143 | 70 | 6 | 1 | 135 | 1 | 128 | 1.53e-11 | 63.9 |
MS.gene055877.t1 | MTR_8g085430 | 32.195 | 205 | 114 | 9 | 21 | 212 | 7 | 199 | 1.60e-11 | 65.5 |
MS.gene055877.t1 | MTR_8g062650 | 63.636 | 44 | 16 | 0 | 186 | 229 | 2 | 45 | 6.62e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene055877.t1 | AT4G10400 | 23.877 | 423 | 270 | 13 | 24 | 409 | 1 | 408 | 1.35e-15 | 78.6 |
MS.gene055877.t1 | AT4G10400 | 23.877 | 423 | 270 | 13 | 24 | 409 | 1 | 408 | 1.35e-15 | 78.6 |
MS.gene055877.t1 | AT4G10400 | 23.877 | 423 | 270 | 13 | 24 | 409 | 1 | 408 | 1.35e-15 | 78.6 |
MS.gene055877.t1 | AT3G42770 | 30.348 | 201 | 118 | 7 | 27 | 214 | 1 | 192 | 1.17e-13 | 73.2 |
MS.gene055877.t1 | AT1G78760 | 23.043 | 460 | 268 | 16 | 14 | 407 | 1 | 440 | 6.71e-13 | 70.5 |
MS.gene055877.t1 | AT2G26860 | 31.220 | 205 | 111 | 10 | 24 | 214 | 1 | 189 | 2.03e-12 | 68.9 |
MS.gene055877.t1 | AT2G26860 | 31.220 | 205 | 111 | 10 | 24 | 214 | 1 | 189 | 2.03e-12 | 68.9 |
MS.gene055877.t1 | AT1G69630 | 23.341 | 437 | 256 | 14 | 24 | 396 | 17 | 438 | 4.12e-12 | 68.2 |
MS.gene055877.t1 | AT5G22700 | 23.096 | 394 | 249 | 12 | 25 | 387 | 43 | 413 | 4.86e-12 | 67.8 |
MS.gene055877.t1 | AT5G50270 | 24.413 | 426 | 247 | 15 | 24 | 392 | 1 | 408 | 5.00e-12 | 67.8 |
MS.gene055877.t1 | AT1G55030 | 24.561 | 456 | 269 | 20 | 4 | 409 | 1 | 431 | 1.32e-11 | 66.2 |
MS.gene055877.t1 | AT4G09920 | 27.103 | 214 | 138 | 6 | 24 | 231 | 1 | 202 | 3.66e-11 | 63.9 |
MS.gene055877.t1 | AT4G09920 | 27.103 | 214 | 138 | 6 | 24 | 231 | 1 | 202 | 3.66e-11 | 63.9 |
MS.gene055877.t1 | AT4G09920 | 27.103 | 214 | 138 | 6 | 24 | 231 | 1 | 202 | 3.66e-11 | 63.9 |
MS.gene055877.t1 | AT3G59200 | 31.683 | 202 | 108 | 10 | 25 | 211 | 7 | 193 | 3.73e-11 | 65.1 |
MS.gene055877.t1 | AT3G59200 | 31.683 | 202 | 108 | 10 | 25 | 211 | 7 | 193 | 3.88e-11 | 64.7 |
MS.gene055877.t1 | AT4G09920 | 27.103 | 214 | 138 | 6 | 24 | 231 | 1 | 202 | 5.10e-11 | 63.9 |
MS.gene055877.t1 | AT4G09920 | 27.103 | 214 | 138 | 6 | 24 | 231 | 1 | 202 | 5.10e-11 | 63.9 |
MS.gene055877.t1 | AT1G55660 | 31.313 | 198 | 114 | 10 | 24 | 211 | 52 | 237 | 7.12e-11 | 64.3 |
MS.gene055877.t1 | AT1G55660 | 31.313 | 198 | 114 | 10 | 24 | 211 | 52 | 237 | 8.31e-11 | 63.5 |
MS.gene055877.t1 | AT2G04230 | 25.111 | 450 | 257 | 18 | 25 | 410 | 13 | 446 | 9.05e-11 | 63.9 |
Find 90 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAACGAAGGATCTATCAATT+TGG | 0.211457 | 8.3:-42694872 | MS.gene055877:CDS |
CTTTGGTCACAAAGTCTTTA+GGG | 0.228938 | 8.3:+42694962 | None:intergenic |
CCCAAACCTGGAAACTTTGC+AGG | 0.233508 | 8.3:-42695001 | MS.gene055877:CDS |
CCTGCAAAGTTTCCAGGTTT+GGG | 0.262212 | 8.3:+42695001 | None:intergenic |
TGAAAACACTGCAGTCTTTA+CGG | 0.271803 | 8.3:-42695138 | MS.gene055877:intron |
ACTTTGGTCACAAAGTCTTT+AGG | 0.274506 | 8.3:+42694961 | None:intergenic |
ACCTGCAAAGTTTCCAGGTT+TGG | 0.300500 | 8.3:+42695000 | None:intergenic |
TGATGTAAATCACGAAATTC+AGG | 0.328876 | 8.3:+42694552 | None:intergenic |
AGTAAACCTGCAAAGTTTCC+AGG | 0.354081 | 8.3:+42694995 | None:intergenic |
ATGTTTCAACTCAAATCTTC+TGG | 0.358687 | 8.3:-42694511 | MS.gene055877:CDS |
TCTTCTTCTTCTGCTTTAGC+TGG | 0.361008 | 8.3:+42696035 | None:intergenic |
GAAATTGTCATTGGCTGTTT+CGG | 0.367190 | 8.3:+42694915 | None:intergenic |
GCAAATATATGGTCGGGCTC+TGG | 0.367759 | 8.3:-42694074 | MS.gene055877:CDS |
TAATCTCTGGAAGGATCTTC+AGG | 0.371732 | 8.3:-42695874 | MS.gene055877:CDS |
TCACTGAAGAAGCTGGAAAT+TGG | 0.372767 | 8.3:-42695072 | MS.gene055877:CDS |
CAAATATATGGTCGGGCTCT+GGG | 0.377373 | 8.3:-42694073 | MS.gene055877:CDS |
TGTTGGCAACTTTCACAGTA+TGG | 0.380596 | 8.3:-42694845 | MS.gene055877:CDS |
AACGAAGGATCTATCAATTT+GGG | 0.387155 | 8.3:-42694871 | MS.gene055877:CDS |
TTTGAATGTCGCGGGATTTG+CGG | 0.388336 | 8.3:+42695778 | None:intergenic |
CGACAGGTTAAGTAGTTTAC+CGG | 0.389505 | 8.3:-42695979 | MS.gene055877:CDS |
AATTCAGGATAATTTAGAAC+AGG | 0.394075 | 8.3:+42694567 | None:intergenic |
TCTATCAATTTGGGTATTGT+TGG | 0.395338 | 8.3:-42694862 | MS.gene055877:CDS |
TTGAAAGATTAGCAAATATA+TGG | 0.400900 | 8.3:-42694085 | MS.gene055877:CDS |
GTCATTGGCTGTTTCGGAGC+TGG | 0.401131 | 8.3:+42694921 | None:intergenic |
ACTGATCATGAAAAGACATT+TGG | 0.423678 | 8.3:+42694045 | None:intergenic |
AAATCCTTCTATGTGAATAT+AGG | 0.424387 | 8.3:+42694226 | None:intergenic |
GAAATAGTTTACTTTCTCTC+TGG | 0.424400 | 8.3:-42695027 | MS.gene055877:CDS |
CTGACCTATATTCACATAGA+AGG | 0.433553 | 8.3:-42694230 | MS.gene055877:CDS |
AGAATTGACTTGAGATAGAA+AGG | 0.433981 | 8.3:+42695704 | None:intergenic |
CTCCTAGGTATCTTAATCTC+TGG | 0.454079 | 8.3:-42695887 | MS.gene055877:CDS |
TCTCTCTGGCTCCCCAAACC+TGG | 0.466364 | 8.3:-42695013 | MS.gene055877:CDS |
TCACTAACTTCGCCGTCGAC+AGG | 0.472434 | 8.3:-42695995 | MS.gene055877:CDS |
ACGTGGATCCTTGCTTCCAT+TGG | 0.480869 | 8.3:-42695675 | MS.gene055877:CDS |
ATTCACATAGAAGGATTTCA+AGG | 0.482694 | 8.3:-42694221 | MS.gene055877:CDS |
ATTTCCAGCTTCTTCAGTGA+TGG | 0.484197 | 8.3:+42695075 | None:intergenic |
GTTTCGGAGCTGGACAAAGT+TGG | 0.492761 | 8.3:+42694931 | None:intergenic |
ATATGACATATTAGCGAGTC+CGG | 0.494354 | 8.3:+42695960 | None:intergenic |
CTTCTATGTGAATATAGGTC+AGG | 0.500493 | 8.3:+42694231 | None:intergenic |
GATGGAAAATGAACAGAAGA+AGG | 0.507493 | 8.3:+42695093 | None:intergenic |
TCCTTCGTTTATATTAAAGT+AGG | 0.513346 | 8.3:+42694885 | None:intergenic |
TCCGGCTGCCATGTTCTCAA+TGG | 0.513864 | 8.3:+42694287 | None:intergenic |
CAAAGTTGGAACGAAAACTT+TGG | 0.516256 | 8.3:+42694945 | None:intergenic |
GCATTGAGAAAGAAGGAAGC+CGG | 0.516507 | 8.3:+42695603 | None:intergenic |
GGACCAAGTGAAATTGTCAT+TGG | 0.520112 | 8.3:+42694906 | None:intergenic |
CATTGAGAAAGAAGGAAGCC+GGG | 0.523422 | 8.3:+42695604 | None:intergenic |
ATTAGTAGCATTGAGAAAGA+AGG | 0.531577 | 8.3:+42695596 | None:intergenic |
AGATTAGCAAATATATGGTC+GGG | 0.538924 | 8.3:-42694080 | MS.gene055877:CDS |
TTGTTGAAGTTGAGTTCCAA+TGG | 0.540180 | 8.3:+42695659 | None:intergenic |
CTACTAATATCGTTTGCCTC+AGG | 0.540942 | 8.3:-42695581 | MS.gene055877:intron |
CAATGAGCCTTGTCTCTCCT+AGG | 0.544772 | 8.3:-42695902 | MS.gene055877:CDS |
CTGCAAAGTTTCCAGGTTTG+GGG | 0.545249 | 8.3:+42695002 | None:intergenic |
GCCGGGAGGTTAATTCGAAA+AGG | 0.547695 | 8.3:+42695621 | None:intergenic |
GGAAATTGGCGCAGATATTG+TGG | 0.550517 | 8.3:-42695058 | MS.gene055877:CDS |
CATTTCTGAACGGAATTGAT+CGG | 0.553482 | 8.3:+42695832 | None:intergenic |
CAGCCAATGACAATTTCACT+TGG | 0.554465 | 8.3:-42694909 | MS.gene055877:CDS |
AACAACCACCATTGAGAACA+TGG | 0.554605 | 8.3:-42694295 | MS.gene055877:CDS |
AAGATTAGCAAATATATGGT+CGG | 0.561234 | 8.3:-42694081 | MS.gene055877:CDS |
CATTTGCTGAATATATTAGA+CGG | 0.563104 | 8.3:-42694181 | MS.gene055877:CDS |
TCAGAAACTGTTGTTGACTC+CGG | 0.563716 | 8.3:+42694269 | None:intergenic |
ACCATTGAGAACATGGCAGC+CGG | 0.564288 | 8.3:-42694288 | MS.gene055877:CDS |
GACAAGGCTCATTGTTGCGA+CGG | 0.573921 | 8.3:+42695911 | None:intergenic |
GAATGTCGCGGGATTTGCGG+AGG | 0.575959 | 8.3:+42695781 | None:intergenic |
GGCTGCCATGTTCTCAATGG+TGG | 0.577603 | 8.3:+42694290 | None:intergenic |
CTATGTGAATATAGGTCAGG+TGG | 0.580589 | 8.3:+42694234 | None:intergenic |
TTGCTAATCTTTCAACAGAA+CGG | 0.586267 | 8.3:+42694093 | None:intergenic |
AGAAGATTTGAGTTGAAACA+TGG | 0.586977 | 8.3:+42694513 | None:intergenic |
GAAGAAGAATTCGACGACGG+AGG | 0.591267 | 8.3:-42696020 | MS.gene055877:CDS |
TTACGGTGCCATCGTTATCG+AGG | 0.597275 | 8.3:-42695121 | MS.gene055877:CDS |
AAATATATGGTCGGGCTCTG+GGG | 0.605682 | 8.3:-42694072 | MS.gene055877:CDS |
TCCTACTTTAATATAAACGA+AGG | 0.607865 | 8.3:-42694886 | MS.gene055877:CDS |
GTTGAGTTCCAATGGAAGCA+AGG | 0.608223 | 8.3:+42695667 | None:intergenic |
GCTGAATATATTAGACGGAA+CGG | 0.608350 | 8.3:-42694176 | MS.gene055877:CDS |
TTATGAGAACTTGAAGCATG+TGG | 0.613522 | 8.3:+42694469 | None:intergenic |
TTCCAGAGATTAAGATACCT+AGG | 0.613776 | 8.3:+42695885 | None:intergenic |
TAATTTAGAACAGGGGCATG+AGG | 0.618078 | 8.3:+42694576 | None:intergenic |
ATTCAGGATAATTTAGAACA+GGG | 0.619965 | 8.3:+42694568 | None:intergenic |
TAGGTATCTTAATCTCTGGA+AGG | 0.622936 | 8.3:-42695883 | MS.gene055877:CDS |
TTCAGGATAATTTAGAACAG+GGG | 0.623593 | 8.3:+42694569 | None:intergenic |
TATGTGAATATAGGTCAGGT+GGG | 0.640734 | 8.3:+42694235 | None:intergenic |
TTTAGAACAGGGGCATGAGG+TGG | 0.641648 | 8.3:+42694579 | None:intergenic |
AATGATGCAACATTTCTGAA+CGG | 0.642150 | 8.3:+42695822 | None:intergenic |
TAAACTACTTAACCTGTCGA+CGG | 0.643627 | 8.3:+42695983 | None:intergenic |
TGTGGCATTTCTCAAGCACA+TGG | 0.650003 | 8.3:+42694487 | None:intergenic |
TCTCATAATTAAGAGCAACA+AGG | 0.667425 | 8.3:-42694454 | MS.gene055877:intron |
AAGTCAATTCTGTTGAAACG+TGG | 0.669978 | 8.3:-42695692 | MS.gene055877:CDS |
TGGCAACTTTCACAGTATGG+CGG | 0.688505 | 8.3:-42694842 | MS.gene055877:CDS |
TAAGATACCTAGGAGAGACA+AGG | 0.699149 | 8.3:+42695895 | None:intergenic |
GAAGAAGAAGAATTCGACGA+CGG | 0.706198 | 8.3:-42696023 | MS.gene055877:CDS |
AGGTTTCACCTCGATAACGA+TGG | 0.724810 | 8.3:+42695113 | None:intergenic |
TGAGAAAGAAGGAAGCCGGG+AGG | 0.751446 | 8.3:+42695607 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTTTTGTTACAATT+TGG | + | chr8.3:42694857-42694876 | None:intergenic | 10.0% |
!! | ATCAACAATATTATAAGTAA+TGG | + | chr8.3:42694689-42694708 | None:intergenic | 15.0% |
!! | ATTACTTATAATATTGTTGA+TGG | - | chr8.3:42694688-42694707 | MS.gene055877:intron | 15.0% |
!! | GGAATATTTATTGTAAAATT+AGG | - | chr8.3:42694709-42694728 | MS.gene055877:intron | 15.0% |
!!! | TGTTTTTTTTGATATTTCAA+TGG | - | chr8.3:42695955-42695974 | MS.gene055877:CDS | 15.0% |
!! | AAAAAAAAAAAAAAGACTGC+AGG | - | chr8.3:42694869-42694888 | MS.gene055877:CDS | 20.0% |
!! | AGTTTAATTCAAACAATCTT+TGG | - | chr8.3:42695673-42695692 | MS.gene055877:CDS | 20.0% |
!! | GTGGATAGAAAATAAATTAT+AGG | + | chr8.3:42694905-42694924 | None:intergenic | 20.0% |
!! | GTTTGAATTAAACTTGAAAA+CGG | + | chr8.3:42695667-42695686 | None:intergenic | 20.0% |
!! | TGTGATGATAGAATTAAAAT+AGG | + | chr8.3:42694540-42694559 | None:intergenic | 20.0% |
!! | TTGAAAGATTAGCAAATATA+TGG | - | chr8.3:42696002-42696021 | MS.gene055877:CDS | 20.0% |
!! | TTTATATTAGCTGTTGTATT+GGG | - | chr8.3:42694641-42694660 | MS.gene055877:intron | 20.0% |
!!! | ATACCATTACTCATTTTTTT+CGG | + | chr8.3:42694812-42694831 | None:intergenic | 20.0% |
!!! | TATGTTTTGTATGTTTAGTT+TGG | - | chr8.3:42695442-42695461 | MS.gene055877:intron | 20.0% |
! | AAATCCTTCTATGTGAATAT+AGG | + | chr8.3:42695864-42695883 | None:intergenic | 25.0% |
! | AAGATTAGCAAATATATGGT+CGG | - | chr8.3:42696006-42696025 | MS.gene055877:CDS | 25.0% |
! | CAGATAAGTTAAAAAGTAAG+TGG | + | chr8.3:42694924-42694943 | None:intergenic | 25.0% |
! | GTTTATATTAGCTGTTGTAT+TGG | - | chr8.3:42694640-42694659 | MS.gene055877:intron | 25.0% |
! | TCCTACTTTAATATAAACGA+AGG | - | chr8.3:42695201-42695220 | MS.gene055877:intron | 25.0% |
! | TCCTTCGTTTATATTAAAGT+AGG | + | chr8.3:42695205-42695224 | None:intergenic | 25.0% |
!! | AATTCAGGATAATTTAGAAC+AGG | + | chr8.3:42695523-42695542 | None:intergenic | 25.0% |
!! | ATTCAGGATAATTTAGAACA+GGG | + | chr8.3:42695522-42695541 | None:intergenic | 25.0% |
!! | CATTTGCTGAATATATTAGA+CGG | - | chr8.3:42695906-42695925 | MS.gene055877:CDS | 25.0% |
!!! | TAAGCACATTTTAACAAAGT+TGG | - | chr8.3:42694786-42694805 | MS.gene055877:intron | 25.0% |
AAACGAAGGATCTATCAATT+TGG | - | chr8.3:42695215-42695234 | MS.gene055877:intron | 30.0% | |
AACGAAGGATCTATCAATTT+GGG | - | chr8.3:42695216-42695235 | MS.gene055877:intron | 30.0% | |
AATAGTGAGTTACATCTCAA+AGG | - | chr8.3:42695342-42695361 | MS.gene055877:intron | 30.0% | |
AATGATGCAACATTTCTGAA+CGG | + | chr8.3:42694268-42694287 | None:intergenic | 30.0% | |
ACTGATCATGAAAAGACATT+TGG | + | chr8.3:42696045-42696064 | None:intergenic | 30.0% | |
AGATTAGCAAATATATGGTC+GGG | - | chr8.3:42696007-42696026 | MS.gene055877:CDS | 30.0% | |
ATGTTTCAACTCAAATCTTC+TGG | - | chr8.3:42695576-42695595 | MS.gene055877:intron | 30.0% | |
ATTCACATAGAAGGATTTCA+AGG | - | chr8.3:42695866-42695885 | MS.gene055877:CDS | 30.0% | |
CGACAAATTTACTTTCAACT+GGG | + | chr8.3:42695293-42695312 | None:intergenic | 30.0% | |
CTTATGAATGACATCAAACA+TGG | + | chr8.3:42694770-42694789 | None:intergenic | 30.0% | |
GAAATAGTTTACTTTCTCTC+TGG | - | chr8.3:42695060-42695079 | MS.gene055877:CDS | 30.0% | |
TATCACCTTCTTCATATTTG+AGG | + | chr8.3:42695368-42695387 | None:intergenic | 30.0% | |
TCGACAAATTTACTTTCAAC+TGG | + | chr8.3:42695294-42695313 | None:intergenic | 30.0% | |
TCTCATAATTAAGAGCAACA+AGG | - | chr8.3:42695633-42695652 | MS.gene055877:CDS | 30.0% | |
TGATGTAAATCACGAAATTC+AGG | + | chr8.3:42695538-42695557 | None:intergenic | 30.0% | |
TTGCTAATCTTTCAACAGAA+CGG | + | chr8.3:42695997-42696016 | None:intergenic | 30.0% | |
! | ATGAAAATTTTGAATGTCGC+GGG | + | chr8.3:42694320-42694339 | None:intergenic | 30.0% |
! | ATTAGTAGCATTGAGAAAGA+AGG | + | chr8.3:42694494-42694513 | None:intergenic | 30.0% |
! | GATGAAAATTTTGAATGTCG+CGG | + | chr8.3:42694321-42694340 | None:intergenic | 30.0% |
! | GTAACTCACTATTGTCATTT+CGG | + | chr8.3:42695335-42695354 | None:intergenic | 30.0% |
! | TCTATCAATTTGGGTATTGT+TGG | - | chr8.3:42695225-42695244 | MS.gene055877:intron | 30.0% |
! | TTCAGGATAATTTAGAACAG+GGG | + | chr8.3:42695521-42695540 | None:intergenic | 30.0% |
!! | AGAAGATTTGAGTTGAAACA+TGG | + | chr8.3:42695577-42695596 | None:intergenic | 30.0% |
!! | AGAATTGACTTGAGATAGAA+AGG | + | chr8.3:42694386-42694405 | None:intergenic | 30.0% |
AAAATAGGTTAACGTACCTG+AGG | + | chr8.3:42694525-42694544 | None:intergenic | 35.0% | |
AAAGGCCTCAAATATGAAGA+AGG | - | chr8.3:42695360-42695379 | MS.gene055877:intron | 35.0% | |
AAGTCAATTCTGTTGAAACG+TGG | - | chr8.3:42694395-42694414 | MS.gene055877:intron | 35.0% | |
ACTTTGGTCACAAAGTCTTT+AGG | + | chr8.3:42695129-42695148 | None:intergenic | 35.0% | |
ATATGACATATTAGCGAGTC+CGG | + | chr8.3:42694130-42694149 | None:intergenic | 35.0% | |
CAAAGTTGGAACGAAAACTT+TGG | + | chr8.3:42695145-42695164 | None:intergenic | 35.0% | |
CATTTCTGAACGGAATTGAT+CGG | + | chr8.3:42694258-42694277 | None:intergenic | 35.0% | |
CTGACCTATATTCACATAGA+AGG | - | chr8.3:42695857-42695876 | MS.gene055877:CDS | 35.0% | |
CTTCTATGTGAATATAGGTC+AGG | + | chr8.3:42695859-42695878 | None:intergenic | 35.0% | |
CTTTGGTCACAAAGTCTTTA+GGG | + | chr8.3:42695128-42695147 | None:intergenic | 35.0% | |
GATGGAAAATGAACAGAAGA+AGG | + | chr8.3:42694997-42695016 | None:intergenic | 35.0% | |
GCTGAATATATTAGACGGAA+CGG | - | chr8.3:42695911-42695930 | MS.gene055877:CDS | 35.0% | |
TAAACTACTTAACCTGTCGA+CGG | + | chr8.3:42694107-42694126 | None:intergenic | 35.0% | |
TAGGTATCTTAATCTCTGGA+AGG | - | chr8.3:42694204-42694223 | MS.gene055877:CDS | 35.0% | |
TATGTGAATATAGGTCAGGT+GGG | + | chr8.3:42695855-42695874 | None:intergenic | 35.0% | |
TGAAAACACTGCAGTCTTTA+CGG | - | chr8.3:42694949-42694968 | MS.gene055877:CDS | 35.0% | |
TGGCCGAAAAAAATGAGTAA+TGG | - | chr8.3:42694806-42694825 | MS.gene055877:intron | 35.0% | |
TTATGAGAACTTGAAGCATG+TGG | + | chr8.3:42695621-42695640 | None:intergenic | 35.0% | |
TTCACATCATTCGACATCAA+AGG | - | chr8.3:42695398-42695417 | MS.gene055877:intron | 35.0% | |
TTCCAGAGATTAAGATACCT+AGG | + | chr8.3:42694205-42694224 | None:intergenic | 35.0% | |
TTGTTGAAGTTGAGTTCCAA+TGG | + | chr8.3:42694431-42694450 | None:intergenic | 35.0% | |
! | GAAATTGTCATTGGCTGTTT+CGG | + | chr8.3:42695175-42695194 | None:intergenic | 35.0% |
AACAACCACCATTGAGAACA+TGG | - | chr8.3:42695792-42695811 | MS.gene055877:CDS | 40.0% | |
AGTAAACCTGCAAAGTTTCC+AGG | + | chr8.3:42695095-42695114 | None:intergenic | 40.0% | |
ATTTCCAGCTTCTTCAGTGA+TGG | + | chr8.3:42695015-42695034 | None:intergenic | 40.0% | |
CAGCCAATGACAATTTCACT+TGG | - | chr8.3:42695178-42695197 | MS.gene055877:intron | 40.0% | |
CGACAGGTTAAGTAGTTTAC+CGG | - | chr8.3:42694108-42694127 | MS.gene055877:CDS | 40.0% | |
CTACTAATATCGTTTGCCTC+AGG | - | chr8.3:42694506-42694525 | MS.gene055877:CDS | 40.0% | |
CTATGTGAATATAGGTCAGG+TGG | + | chr8.3:42695856-42695875 | None:intergenic | 40.0% | |
CTCCTAGGTATCTTAATCTC+TGG | - | chr8.3:42694200-42694219 | MS.gene055877:CDS | 40.0% | |
GAAGAAGAAGAATTCGACGA+CGG | - | chr8.3:42694064-42694083 | MS.gene055877:CDS | 40.0% | |
GGACCAAGTGAAATTGTCAT+TGG | + | chr8.3:42695184-42695203 | None:intergenic | 40.0% | |
TAAGATACCTAGGAGAGACA+AGG | + | chr8.3:42694195-42694214 | None:intergenic | 40.0% | |
TCACTGAAGAAGCTGGAAAT+TGG | - | chr8.3:42695015-42695034 | MS.gene055877:CDS | 40.0% | |
TCTTCTTCTTCTGCTTTAGC+TGG | + | chr8.3:42694055-42694074 | None:intergenic | 40.0% | |
TGTTGGCAACTTTCACAGTA+TGG | - | chr8.3:42695242-42695261 | MS.gene055877:intron | 40.0% | |
TTCGGATGAGGTTGAGAATA+GGG | + | chr8.3:42695317-42695336 | None:intergenic | 40.0% | |
TTTCGGATGAGGTTGAGAAT+AGG | + | chr8.3:42695318-42695337 | None:intergenic | 40.0% | |
! | CACTATTGTCATTTCGGATG+AGG | + | chr8.3:42695329-42695348 | None:intergenic | 40.0% |
! | TAATCTCTGGAAGGATCTTC+AGG | - | chr8.3:42694213-42694232 | MS.gene055877:CDS | 40.0% |
! | TAATTTAGAACAGGGGCATG+AGG | + | chr8.3:42695514-42695533 | None:intergenic | 40.0% |
! | TCCTTTTCGAATTAACCTCC+CGG | - | chr8.3:42694465-42694484 | MS.gene055877:CDS | 40.0% |
! | TTTTCCATCACTGAAGAAGC+TGG | - | chr8.3:42695008-42695027 | MS.gene055877:CDS | 40.0% |
!! | TCAGAAACTGTTGTTGACTC+CGG | + | chr8.3:42695821-42695840 | None:intergenic | 40.0% |
!!! | TTGCGACGGAAGTTTTAGTT+GGG | + | chr8.3:42694165-42694184 | None:intergenic | 40.0% |
AAATATATGGTCGGGCTCTG+GGG | - | chr8.3:42696015-42696034 | MS.gene055877:CDS | 45.0% | |
ACCTGCAAAGTTTCCAGGTT+TGG | + | chr8.3:42695090-42695109 | None:intergenic | 45.0% | |
AGGTTTCACCTCGATAACGA+TGG | + | chr8.3:42694977-42694996 | None:intergenic | 45.0% | |
CAAATATATGGTCGGGCTCT+GGG | - | chr8.3:42696014-42696033 | MS.gene055877:CDS | 45.0% | |
CATTGAGAAAGAAGGAAGCC+GGG | + | chr8.3:42694486-42694505 | None:intergenic | 45.0% | |
CCTGCAAAGTTTCCAGGTTT+GGG | + | chr8.3:42695089-42695108 | None:intergenic | 45.0% | |
CTGCAAAGTTTCCAGGTTTG+GGG | + | chr8.3:42695088-42695107 | None:intergenic | 45.0% | |
GCATTGAGAAAGAAGGAAGC+CGG | + | chr8.3:42694487-42694506 | None:intergenic | 45.0% | |
GGAAATTGGCGCAGATATTG+TGG | - | chr8.3:42695029-42695048 | MS.gene055877:CDS | 45.0% | |
GTTGAGTTCCAATGGAAGCA+AGG | + | chr8.3:42694423-42694442 | None:intergenic | 45.0% | |
TGGCAACTTTCACAGTATGG+CGG | - | chr8.3:42695245-42695264 | MS.gene055877:intron | 45.0% | |
TGTGGCATTTCTCAAGCACA+TGG | + | chr8.3:42695603-42695622 | None:intergenic | 45.0% | |
TTGTTATCGTGTACGTGCAG+TGG | - | chr8.3:42695485-42695504 | MS.gene055877:intron | 45.0% | |
TTTGAATGTCGCGGGATTTG+CGG | + | chr8.3:42694312-42694331 | None:intergenic | 45.0% | |
! | GACATGATGTCCCTTTTTGC+TGG | - | chr8.3:42695762-42695781 | MS.gene055877:CDS | 45.0% |
! | TGATGTCCCTTTTTGCTGGT+AGG | - | chr8.3:42695766-42695785 | MS.gene055877:CDS | 45.0% |
!! | GTTGCGACGGAAGTTTTAGT+TGG | + | chr8.3:42694166-42694185 | None:intergenic | 45.0% |
ACCATTGAGAACATGGCAGC+CGG | - | chr8.3:42695799-42695818 | MS.gene055877:CDS | 50.0% | |
ACGTGGATCCTTGCTTCCAT+TGG | - | chr8.3:42694412-42694431 | MS.gene055877:intron | 50.0% | |
CCCAAACCTGGAAACTTTGC+AGG | - | chr8.3:42695086-42695105 | MS.gene055877:CDS | 50.0% | |
GAAGAAGAATTCGACGACGG+AGG | - | chr8.3:42694067-42694086 | MS.gene055877:CDS | 50.0% | |
GACAAGGCTCATTGTTGCGA+CGG | + | chr8.3:42694179-42694198 | None:intergenic | 50.0% | |
GCAAATATATGGTCGGGCTC+TGG | - | chr8.3:42696013-42696032 | MS.gene055877:CDS | 50.0% | |
GCCGGGAGGTTAATTCGAAA+AGG | + | chr8.3:42694469-42694488 | None:intergenic | 50.0% | |
GTTCCGCCTACCAGCAAAAA+GGG | + | chr8.3:42695775-42695794 | None:intergenic | 50.0% | |
GTTTCGGAGCTGGACAAAGT+TGG | + | chr8.3:42695159-42695178 | None:intergenic | 50.0% | |
TGTTCCGCCTACCAGCAAAA+AGG | + | chr8.3:42695776-42695795 | None:intergenic | 50.0% | |
! | CAATGAGCCTTGTCTCTCCT+AGG | - | chr8.3:42694185-42694204 | MS.gene055877:CDS | 50.0% |
! | TGTCCCTTTTTGCTGGTAGG+CGG | - | chr8.3:42695769-42695788 | MS.gene055877:CDS | 50.0% |
! | TTTAGAACAGGGGCATGAGG+TGG | + | chr8.3:42695511-42695530 | None:intergenic | 50.0% |
!! | TTACGGTGCCATCGTTATCG+AGG | - | chr8.3:42694966-42694985 | MS.gene055877:CDS | 50.0% |
!!! | CGACGGAAGTTTTAGTTGGG+AGG | + | chr8.3:42694162-42694181 | None:intergenic | 50.0% |
GGCTGCCATGTTCTCAATGG+TGG | + | chr8.3:42695800-42695819 | None:intergenic | 55.0% | |
TCACTAACTTCGCCGTCGAC+AGG | - | chr8.3:42694092-42694111 | MS.gene055877:CDS | 55.0% | |
TCCGGCTGCCATGTTCTCAA+TGG | + | chr8.3:42695803-42695822 | None:intergenic | 55.0% | |
TGAGAAAGAAGGAAGCCGGG+AGG | + | chr8.3:42694483-42694502 | None:intergenic | 55.0% | |
! | GTCATTGGCTGTTTCGGAGC+TGG | + | chr8.3:42695169-42695188 | None:intergenic | 55.0% |
GAATGTCGCGGGATTTGCGG+AGG | + | chr8.3:42694309-42694328 | None:intergenic | 60.0% | |
! | TCTCTCTGGCTCCCCAAACC+TGG | - | chr8.3:42695074-42695093 | MS.gene055877:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 42694037 | 42696072 | 42694037 | ID=MS.gene055877 |
chr8.3 | mRNA | 42694037 | 42696072 | 42694037 | ID=MS.gene055877.t1;Parent=MS.gene055877 |
chr8.3 | exon | 42695582 | 42696072 | 42695582 | ID=MS.gene055877.t1.exon1;Parent=MS.gene055877.t1 |
chr8.3 | CDS | 42695582 | 42696072 | 42695582 | ID=cds.MS.gene055877.t1;Parent=MS.gene055877.t1 |
chr8.3 | exon | 42694828 | 42695146 | 42694828 | ID=MS.gene055877.t1.exon2;Parent=MS.gene055877.t1 |
chr8.3 | CDS | 42694828 | 42695146 | 42694828 | ID=cds.MS.gene055877.t1;Parent=MS.gene055877.t1 |
chr8.3 | exon | 42694455 | 42694604 | 42694455 | ID=MS.gene055877.t1.exon3;Parent=MS.gene055877.t1 |
chr8.3 | CDS | 42694455 | 42694604 | 42694455 | ID=cds.MS.gene055877.t1;Parent=MS.gene055877.t1 |
chr8.3 | exon | 42694037 | 42694321 | 42694037 | ID=MS.gene055877.t1.exon4;Parent=MS.gene055877.t1 |
chr8.3 | CDS | 42694037 | 42694321 | 42694037 | ID=cds.MS.gene055877.t1;Parent=MS.gene055877.t1 |
Gene Sequence |
Protein sequence |